Query 008516
Match_columns 563
No_of_seqs 355 out of 2123
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 05:23:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y8q_B Anthracycline-, ubiquit 100.0 1E-109 4E-114 923.0 41.2 504 2-528 7-534 (640)
2 3cmm_A Ubiquitin-activating en 100.0 2E-100 8E-105 889.3 31.6 515 2-527 415-1013(1015)
3 1tt5_B Ubiquitin-activating en 100.0 3.1E-68 1.1E-72 572.3 30.5 375 4-521 31-425 (434)
4 2nvu_B Maltose binding protein 100.0 1.5E-63 5.2E-68 576.1 41.1 378 2-522 400-797 (805)
5 1z7l_A Ubiquitin-activating en 100.0 3E-44 1E-48 363.0 3.8 214 160-374 9-276 (276)
6 1y8q_A Ubiquitin-like 1 activa 100.0 2.2E-38 7.5E-43 332.2 26.2 155 2-159 26-180 (346)
7 3h8v_A Ubiquitin-like modifier 100.0 5.7E-35 1.9E-39 298.5 16.8 155 3-158 26-194 (292)
8 1tt5_A APPBP1, amyloid protein 100.0 7.9E-35 2.7E-39 320.3 11.1 179 2-183 22-201 (531)
9 3rui_A Ubiquitin-like modifier 100.0 2.4E-33 8.4E-38 291.0 16.7 191 1-194 23-241 (340)
10 1zud_1 Adenylyltransferase THI 100.0 9.3E-33 3.2E-37 277.3 16.4 157 2-159 18-175 (251)
11 3h5n_A MCCB protein; ubiquitin 100.0 1.4E-31 4.8E-36 281.3 19.5 156 3-159 108-266 (353)
12 4gsl_A Ubiquitin-like modifier 100.0 7.4E-32 2.5E-36 296.7 15.7 191 1-194 315-533 (615)
13 1jw9_B Molybdopterin biosynthe 100.0 1.8E-31 6.1E-36 267.7 16.1 157 2-159 21-178 (249)
14 3vh1_A Ubiquitin-like modifier 100.0 1.4E-31 4.9E-36 294.4 16.2 191 2-195 317-535 (598)
15 3cmm_A Ubiquitin-activating en 100.0 3E-30 1E-34 300.8 16.8 174 2-185 17-193 (1015)
16 1y8x_B Ubiquitin-activating en 98.7 1.9E-08 6.4E-13 85.8 6.2 78 432-516 1-84 (98)
17 1z7l_A Ubiquitin-activating en 98.5 5.1E-08 1.7E-12 98.4 5.1 62 312-373 101-179 (276)
18 3onh_A Ubiquitin-activating en 98.4 2.4E-07 8.3E-12 81.6 6.3 80 437-529 7-96 (127)
19 3ic5_A Putative saccharopine d 97.7 0.00016 5.4E-09 61.6 8.9 96 12-135 5-100 (118)
20 3jyo_A Quinate/shikimate dehyd 97.6 0.00016 5.3E-09 73.3 8.5 79 10-112 125-203 (283)
21 2g1u_A Hypothetical protein TM 97.3 0.0017 5.9E-08 58.8 11.2 101 8-135 15-117 (155)
22 3llv_A Exopolyphosphatase-rela 97.1 0.005 1.7E-07 54.5 11.8 97 10-134 4-101 (141)
23 4ina_A Saccharopine dehydrogen 97.0 0.0023 8E-08 67.7 10.9 101 13-134 2-106 (405)
24 3dfz_A SIRC, precorrin-2 dehyd 97.0 0.0011 3.7E-08 64.8 7.2 91 9-131 28-118 (223)
25 2hmt_A YUAA protein; RCK, KTN, 97.0 0.0025 8.4E-08 56.0 8.9 94 9-130 3-98 (144)
26 3abi_A Putative uncharacterize 96.9 0.0028 9.7E-08 65.9 9.9 94 11-135 15-108 (365)
27 3tum_A Shikimate dehydrogenase 96.8 0.004 1.4E-07 62.5 9.4 74 10-112 123-196 (269)
28 1lss_A TRK system potassium up 96.8 0.0054 1.9E-07 53.5 9.2 90 12-128 4-94 (140)
29 3e8x_A Putative NAD-dependent 96.7 0.0051 1.7E-07 59.2 9.6 104 4-137 13-132 (236)
30 3tnl_A Shikimate dehydrogenase 96.7 0.0027 9.2E-08 65.1 7.8 84 10-112 152-235 (315)
31 3t4e_A Quinate/shikimate dehyd 96.5 0.0074 2.5E-07 61.8 9.6 84 10-112 146-229 (312)
32 1kyq_A Met8P, siroheme biosynt 96.5 0.0053 1.8E-07 61.7 8.1 112 10-134 11-140 (274)
33 3l4b_C TRKA K+ channel protien 96.5 0.0097 3.3E-07 56.9 9.5 95 13-134 1-97 (218)
34 1id1_A Putative potassium chan 96.5 0.015 5.2E-07 52.3 10.2 93 11-127 2-95 (153)
35 2z2v_A Hypothetical protein PH 96.4 0.0061 2.1E-07 63.7 7.9 94 11-135 15-108 (365)
36 3c85_A Putative glutathione-re 96.4 0.019 6.4E-07 53.2 10.4 91 10-128 37-130 (183)
37 3pwz_A Shikimate dehydrogenase 96.3 0.0079 2.7E-07 60.3 8.2 74 10-113 118-191 (272)
38 3dhn_A NAD-dependent epimerase 96.3 0.02 6.8E-07 54.3 10.5 97 13-138 5-114 (227)
39 3o8q_A Shikimate 5-dehydrogena 96.3 0.0099 3.4E-07 59.9 8.6 74 10-113 124-197 (281)
40 1hdo_A Biliverdin IX beta redu 96.3 0.018 6.3E-07 53.3 10.0 100 12-139 3-114 (206)
41 4id9_A Short-chain dehydrogena 96.3 0.011 3.6E-07 60.1 9.0 42 3-45 10-52 (347)
42 1pjq_A CYSG, siroheme synthase 96.3 0.012 4.2E-07 63.2 9.8 91 10-131 10-100 (457)
43 3gpi_A NAD-dependent epimerase 96.2 0.016 5.4E-07 57.3 9.8 99 11-141 2-114 (286)
44 2ph5_A Homospermidine synthase 96.1 0.0094 3.2E-07 64.2 7.7 98 12-137 13-116 (480)
45 3slg_A PBGP3 protein; structur 96.0 0.0094 3.2E-07 61.2 7.2 112 4-142 16-147 (372)
46 2egg_A AROE, shikimate 5-dehyd 96.0 0.0081 2.8E-07 60.9 6.6 76 10-113 139-214 (297)
47 3ruf_A WBGU; rossmann fold, UD 96.0 0.032 1.1E-06 56.6 11.1 114 8-141 21-156 (351)
48 3rku_A Oxidoreductase YMR226C; 95.9 0.046 1.6E-06 54.7 11.5 85 7-110 28-122 (287)
49 3dqp_A Oxidoreductase YLBE; al 95.9 0.033 1.1E-06 52.6 9.8 96 13-138 1-108 (219)
50 3fwz_A Inner membrane protein 95.9 0.029 1E-06 49.8 8.8 87 12-126 7-94 (140)
51 3oj0_A Glutr, glutamyl-tRNA re 95.8 0.0092 3.2E-07 53.2 5.1 75 8-114 17-91 (144)
52 1y1p_A ARII, aldehyde reductas 95.8 0.078 2.7E-06 53.2 12.5 81 10-111 9-91 (342)
53 2bka_A CC3, TAT-interacting pr 95.7 0.068 2.3E-06 51.0 11.3 76 10-112 16-93 (242)
54 2pzm_A Putative nucleotide sug 95.6 0.038 1.3E-06 55.8 9.7 37 8-45 16-53 (330)
55 3nzo_A UDP-N-acetylglucosamine 95.6 0.1 3.5E-06 54.7 13.2 85 8-111 31-120 (399)
56 3m2p_A UDP-N-acetylglucosamine 95.6 0.053 1.8E-06 54.1 10.5 98 12-141 2-114 (311)
57 1sb8_A WBPP; epimerase, 4-epim 95.6 0.049 1.7E-06 55.4 10.4 115 10-141 25-158 (352)
58 3gvi_A Malate dehydrogenase; N 95.6 0.032 1.1E-06 57.3 8.8 77 9-112 4-84 (324)
59 4egb_A DTDP-glucose 4,6-dehydr 95.6 0.011 3.8E-07 59.9 5.4 111 10-141 22-154 (346)
60 2gn4_A FLAA1 protein, UDP-GLCN 95.5 0.079 2.7E-06 54.2 11.5 80 9-111 18-99 (344)
61 4e12_A Diketoreductase; oxidor 95.4 0.025 8.5E-07 56.5 7.4 32 13-45 5-36 (283)
62 3i6i_A Putative leucoanthocyan 95.4 0.075 2.6E-06 54.0 11.1 103 10-133 8-116 (346)
63 2x4g_A Nucleoside-diphosphate- 95.3 0.079 2.7E-06 53.3 10.7 101 13-141 14-131 (342)
64 3qvo_A NMRA family protein; st 95.3 0.067 2.3E-06 51.4 9.7 105 9-140 20-129 (236)
65 3ko8_A NAD-dependent epimerase 95.2 0.079 2.7E-06 52.6 10.4 99 13-141 1-118 (312)
66 2axq_A Saccharopine dehydrogen 95.2 0.03 1E-06 60.4 7.6 100 9-135 20-119 (467)
67 3r6d_A NAD-dependent epimerase 95.2 0.062 2.1E-06 50.8 9.1 100 13-138 6-110 (221)
68 3d1l_A Putative NADP oxidoredu 95.2 0.061 2.1E-06 52.8 9.3 93 10-135 8-102 (266)
69 2hk9_A Shikimate dehydrogenase 95.2 0.052 1.8E-06 54.1 8.7 34 10-44 127-160 (275)
70 1lu9_A Methylene tetrahydromet 95.1 0.024 8.2E-07 56.7 6.1 80 10-112 117-197 (287)
71 3o26_A Salutaridine reductase; 95.1 0.058 2E-06 53.5 8.9 65 7-92 7-72 (311)
72 3tri_A Pyrroline-5-carboxylate 95.1 0.05 1.7E-06 54.4 8.3 81 11-124 2-84 (280)
73 3p7m_A Malate dehydrogenase; p 95.1 0.051 1.8E-06 55.7 8.4 76 10-112 3-82 (321)
74 3ius_A Uncharacterized conserv 95.1 0.082 2.8E-06 51.8 9.7 98 11-141 4-108 (286)
75 2raf_A Putative dinucleotide-b 95.0 0.081 2.8E-06 50.4 9.3 37 8-45 15-51 (209)
76 3h2s_A Putative NADH-flavin re 95.0 0.028 9.5E-07 53.1 6.0 95 13-137 1-106 (224)
77 3nyw_A Putative oxidoreductase 95.0 0.05 1.7E-06 53.1 8.0 65 9-93 4-70 (250)
78 3qsg_A NAD-binding phosphogluc 95.0 0.08 2.7E-06 53.7 9.7 35 11-45 23-57 (312)
79 3don_A Shikimate dehydrogenase 95.0 0.045 1.5E-06 55.0 7.5 37 10-46 115-151 (277)
80 3vku_A L-LDH, L-lactate dehydr 94.9 0.071 2.4E-06 54.8 9.1 75 11-113 8-86 (326)
81 2z1m_A GDP-D-mannose dehydrata 94.9 0.11 3.6E-06 52.2 10.3 34 10-44 1-35 (345)
82 2aef_A Calcium-gated potassium 94.9 0.042 1.4E-06 52.9 7.0 89 11-129 8-97 (234)
83 2b69_A UDP-glucuronate decarbo 94.9 0.18 6.2E-06 50.9 12.1 111 3-141 18-146 (343)
84 3sxp_A ADP-L-glycero-D-mannohe 94.8 0.11 3.9E-06 52.9 10.4 118 10-142 8-144 (362)
85 1ff9_A Saccharopine reductase; 94.8 0.041 1.4E-06 59.0 7.1 34 11-45 2-35 (450)
86 1xg5_A ARPG836; short chain de 94.8 0.11 3.7E-06 51.2 9.7 82 9-110 29-118 (279)
87 3o38_A Short chain dehydrogena 94.7 0.056 1.9E-06 52.9 7.4 64 9-93 19-84 (266)
88 1iy8_A Levodione reductase; ox 94.7 0.091 3.1E-06 51.5 9.0 82 9-110 10-99 (267)
89 3ehe_A UDP-glucose 4-epimerase 94.7 0.12 4.2E-06 51.4 10.1 99 13-141 2-119 (313)
90 3t4x_A Oxidoreductase, short c 94.7 0.074 2.5E-06 52.3 8.3 81 10-110 8-92 (267)
91 2dpo_A L-gulonate 3-dehydrogen 94.7 0.041 1.4E-06 56.4 6.4 153 11-192 5-179 (319)
92 1rkx_A CDP-glucose-4,6-dehydra 94.6 0.13 4.4E-06 52.3 10.2 41 1-45 1-42 (357)
93 2q1s_A Putative nucleotide sug 94.6 0.12 3.9E-06 53.3 9.9 108 9-141 29-156 (377)
94 3lf2_A Short chain oxidoreduct 94.6 0.087 3E-06 51.7 8.5 81 10-110 6-94 (265)
95 3dtt_A NADP oxidoreductase; st 94.6 0.19 6.4E-06 48.9 10.7 109 7-135 14-124 (245)
96 1sby_A Alcohol dehydrogenase; 94.5 0.16 5.4E-06 49.2 10.1 80 10-110 3-91 (254)
97 3enk_A UDP-glucose 4-epimerase 94.5 0.11 3.9E-06 52.1 9.2 110 11-141 4-134 (341)
98 2d4a_B Malate dehydrogenase; a 94.4 0.15 5E-06 51.8 9.9 72 14-112 1-76 (308)
99 3pqe_A L-LDH, L-lactate dehydr 94.4 0.091 3.1E-06 54.0 8.3 73 12-112 5-82 (326)
100 3l9w_A Glutathione-regulated p 94.4 0.046 1.6E-06 58.0 6.2 90 12-129 4-94 (413)
101 2q1w_A Putative nucleotide sug 94.4 0.18 6E-06 50.9 10.4 37 8-45 17-54 (333)
102 2c5a_A GDP-mannose-3', 5'-epim 94.3 0.15 5.2E-06 52.5 10.0 34 11-45 28-62 (379)
103 1fmc_A 7 alpha-hydroxysteroid 94.3 0.069 2.3E-06 51.5 7.0 42 1-44 1-43 (255)
104 3ew7_A LMO0794 protein; Q8Y8U8 94.3 0.14 4.8E-06 47.8 8.9 94 13-137 1-104 (221)
105 4g65_A TRK system potassium up 94.3 0.039 1.3E-06 59.3 5.6 97 12-135 3-101 (461)
106 3e48_A Putative nucleoside-dip 94.2 0.25 8.7E-06 48.4 10.9 99 13-138 1-108 (289)
107 3rft_A Uronate dehydrogenase; 94.2 0.083 2.8E-06 51.8 7.3 96 12-138 3-113 (267)
108 1ek6_A UDP-galactose 4-epimera 94.2 0.14 4.7E-06 51.7 9.1 115 12-141 2-137 (348)
109 2ydy_A Methionine adenosyltran 94.2 0.11 3.7E-06 51.8 8.2 32 12-44 2-34 (315)
110 2x6t_A ADP-L-glycero-D-manno-h 94.2 0.13 4.5E-06 52.3 8.9 37 9-45 43-80 (357)
111 1oju_A MDH, malate dehydrogena 94.1 0.16 5.5E-06 51.3 9.4 73 13-112 1-78 (294)
112 1hyh_A L-hicdh, L-2-hydroxyiso 94.1 0.37 1.3E-05 48.6 12.1 74 13-114 2-80 (309)
113 2hun_A 336AA long hypothetical 94.1 0.18 6.2E-06 50.5 9.8 110 11-141 2-132 (336)
114 2x0j_A Malate dehydrogenase; o 94.1 0.21 7.2E-06 50.5 10.1 73 13-112 1-78 (294)
115 1ldn_A L-lactate dehydrogenase 94.1 0.17 5.9E-06 51.4 9.6 73 12-112 6-83 (316)
116 3phh_A Shikimate dehydrogenase 94.0 0.069 2.4E-06 53.4 6.4 31 12-43 118-148 (269)
117 2hjr_A Malate dehydrogenase; m 94.0 0.14 4.9E-06 52.4 9.0 38 8-45 10-47 (328)
118 3qiv_A Short-chain dehydrogena 94.0 0.14 4.7E-06 49.6 8.4 80 9-110 6-93 (253)
119 1jay_A Coenzyme F420H2:NADP+ o 94.0 0.24 8.1E-06 46.6 9.9 95 13-135 1-97 (212)
120 2ewd_A Lactate dehydrogenase,; 94.0 0.2 6.7E-06 50.9 9.9 34 12-45 4-37 (317)
121 3pef_A 6-phosphogluconate dehy 94.0 0.098 3.4E-06 52.1 7.4 32 13-45 2-33 (287)
122 3u62_A Shikimate dehydrogenase 94.0 0.042 1.5E-06 54.3 4.6 35 10-45 107-141 (253)
123 3sju_A Keto reductase; short-c 93.9 0.14 4.8E-06 50.7 8.5 84 5-110 17-108 (279)
124 1xu9_A Corticosteroid 11-beta- 93.9 0.16 5.5E-06 50.2 8.8 81 9-110 25-113 (286)
125 3d0o_A L-LDH 1, L-lactate dehy 93.9 0.2 6.7E-06 51.1 9.6 37 9-45 3-40 (317)
126 2hrz_A AGR_C_4963P, nucleoside 93.8 0.2 6.7E-06 50.5 9.5 75 10-111 12-94 (342)
127 3svt_A Short-chain type dehydr 93.8 0.16 5.5E-06 50.2 8.6 66 8-93 7-74 (281)
128 3vps_A TUNA, NAD-dependent epi 93.8 0.22 7.5E-06 49.3 9.7 37 9-46 4-41 (321)
129 1orr_A CDP-tyvelose-2-epimeras 93.8 0.25 8.5E-06 49.6 10.2 107 13-141 2-130 (347)
130 3ado_A Lambda-crystallin; L-gu 93.8 0.16 5.6E-06 51.9 8.8 167 12-192 6-179 (319)
131 2z1n_A Dehydrogenase; reductas 93.8 0.2 6.7E-06 48.8 9.0 34 10-44 5-39 (260)
132 1p9l_A Dihydrodipicolinate red 93.7 0.19 6.4E-06 49.5 8.8 77 13-140 1-80 (245)
133 2h78_A Hibadh, 3-hydroxyisobut 93.7 0.1 3.5E-06 52.2 7.1 32 13-45 4-35 (302)
134 2bll_A Protein YFBG; decarboxy 93.7 0.32 1.1E-05 48.7 10.8 102 13-141 1-122 (345)
135 2v6b_A L-LDH, L-lactate dehydr 93.6 0.23 8E-06 50.1 9.5 73 13-113 1-77 (304)
136 4ezb_A Uncharacterized conserv 93.6 0.33 1.1E-05 49.3 10.6 98 11-136 23-122 (317)
137 3pk0_A Short-chain dehydrogena 93.5 0.16 5.6E-06 49.6 8.0 80 10-110 8-95 (262)
138 2d5c_A AROE, shikimate 5-dehyd 93.5 0.21 7.3E-06 49.0 8.8 33 10-44 115-147 (263)
139 4e21_A 6-phosphogluconate dehy 93.5 0.22 7.5E-06 51.7 9.2 36 10-46 20-55 (358)
140 3i1j_A Oxidoreductase, short c 93.5 0.21 7.3E-06 47.9 8.6 37 8-45 10-47 (247)
141 2pv7_A T-protein [includes: ch 93.4 0.15 5.3E-06 51.2 7.8 32 13-45 22-54 (298)
142 2gas_A Isoflavone reductase; N 93.4 0.59 2E-05 46.0 12.0 100 12-131 2-107 (307)
143 2rcy_A Pyrroline carboxylate r 93.4 0.17 5.7E-06 49.3 7.8 34 12-45 4-40 (262)
144 1ez4_A Lactate dehydrogenase; 93.3 0.28 9.6E-06 50.0 9.6 74 12-113 5-82 (318)
145 3ioy_A Short-chain dehydrogena 93.3 0.14 4.9E-06 51.8 7.3 81 10-110 6-94 (319)
146 1t2d_A LDH-P, L-lactate dehydr 93.3 0.34 1.2E-05 49.5 10.2 34 12-45 4-37 (322)
147 3l6d_A Putative oxidoreductase 93.3 0.26 8.9E-06 49.6 9.2 33 11-44 8-40 (306)
148 2zat_A Dehydrogenase/reductase 93.2 0.21 7.1E-06 48.6 8.2 35 9-44 11-46 (260)
149 1r6d_A TDP-glucose-4,6-dehydra 93.2 0.42 1.4E-05 47.9 10.8 108 13-141 1-132 (337)
150 1qyd_A Pinoresinol-lariciresin 93.2 0.58 2E-05 46.2 11.6 100 12-131 4-111 (313)
151 1n2s_A DTDP-4-, DTDP-glucose o 93.2 0.11 3.7E-06 51.3 6.2 32 13-46 1-33 (299)
152 2c20_A UDP-glucose 4-epimerase 93.2 0.32 1.1E-05 48.5 9.8 32 13-45 2-34 (330)
153 1ur5_A Malate dehydrogenase; o 93.2 0.39 1.3E-05 48.6 10.5 74 13-113 3-80 (309)
154 3h7a_A Short chain dehydrogena 93.2 0.21 7.2E-06 48.6 8.2 34 10-44 5-39 (252)
155 3awd_A GOX2181, putative polyo 93.2 0.27 9.1E-06 47.5 8.8 34 10-44 11-45 (260)
156 3tl2_A Malate dehydrogenase; c 93.2 0.19 6.3E-06 51.4 7.9 35 11-45 7-41 (315)
157 2jl1_A Triphenylmethane reduct 93.2 0.11 3.7E-06 51.0 6.0 98 13-138 1-109 (287)
158 1mxh_A Pteridine reductase 2; 93.2 0.26 8.9E-06 48.3 8.8 39 5-44 4-43 (276)
159 3gt0_A Pyrroline-5-carboxylate 93.1 0.16 5.6E-06 49.3 7.3 77 12-121 2-81 (247)
160 1qyc_A Phenylcoumaran benzylic 93.1 0.3 1E-05 48.2 9.3 101 12-131 4-108 (308)
161 4imr_A 3-oxoacyl-(acyl-carrier 93.1 0.24 8.3E-06 48.9 8.5 81 8-110 29-116 (275)
162 3doj_A AT3G25530, dehydrogenas 93.1 0.17 5.7E-06 51.2 7.5 35 11-46 20-54 (310)
163 2ae2_A Protein (tropinone redu 93.1 0.34 1.2E-05 47.1 9.5 34 10-44 7-41 (260)
164 4b8w_A GDP-L-fucose synthase; 93.1 0.11 3.6E-06 51.3 5.8 27 10-36 4-31 (319)
165 4dqv_A Probable peptide synthe 93.1 0.35 1.2E-05 51.8 10.3 125 10-141 71-219 (478)
166 2dc1_A L-aspartate dehydrogena 93.0 0.39 1.3E-05 46.3 9.7 33 13-45 1-33 (236)
167 1e6u_A GDP-fucose synthetase; 93.0 0.19 6.4E-06 50.1 7.6 32 11-43 2-34 (321)
168 2zqz_A L-LDH, L-lactate dehydr 93.0 0.32 1.1E-05 49.7 9.5 74 12-113 9-86 (326)
169 3rwb_A TPLDH, pyridoxal 4-dehy 93.0 0.17 5.8E-06 49.0 7.1 35 9-44 3-38 (247)
170 3rkr_A Short chain oxidoreduct 93.0 0.2 6.9E-06 48.8 7.7 63 9-93 26-89 (262)
171 3c1o_A Eugenol synthase; pheny 93.0 0.53 1.8E-05 46.8 11.0 99 12-130 4-107 (321)
172 4fc7_A Peroxisomal 2,4-dienoyl 93.0 0.22 7.6E-06 49.1 8.0 35 9-44 24-59 (277)
173 3tfo_A Putative 3-oxoacyl-(acy 93.0 0.25 8.6E-06 48.6 8.4 79 10-110 2-88 (264)
174 2cvz_A Dehydrogenase, 3-hydrox 93.0 0.24 8.1E-06 48.8 8.2 74 13-123 2-76 (289)
175 1a5z_A L-lactate dehydrogenase 92.9 0.29 9.9E-06 49.8 9.0 33 13-45 1-34 (319)
176 3pgx_A Carveol dehydrogenase; 92.9 0.45 1.5E-05 46.8 10.2 93 9-110 12-112 (280)
177 3sc6_A DTDP-4-dehydrorhamnose 92.9 0.12 4.2E-06 50.6 6.0 31 13-44 6-37 (287)
178 3tjr_A Short chain dehydrogena 92.9 0.29 9.8E-06 49.0 8.8 79 10-110 29-115 (301)
179 1pzg_A LDH, lactate dehydrogen 92.9 0.12 4.2E-06 52.9 6.2 33 13-45 10-42 (331)
180 3ucx_A Short chain dehydrogena 92.8 0.23 7.8E-06 48.6 7.8 80 9-110 8-95 (264)
181 2jah_A Clavulanic acid dehydro 92.8 0.36 1.2E-05 46.6 9.2 34 10-44 5-39 (247)
182 3gaf_A 7-alpha-hydroxysteroid 92.8 0.22 7.6E-06 48.5 7.7 80 9-110 9-96 (256)
183 3sc4_A Short chain dehydrogena 92.8 0.32 1.1E-05 48.2 8.9 86 10-110 7-100 (285)
184 1wma_A Carbonyl reductase [NAD 92.8 0.2 6.8E-06 48.4 7.3 34 11-45 3-38 (276)
185 2wm3_A NMRA-like family domain 92.8 0.6 2E-05 46.0 10.9 103 12-139 5-118 (299)
186 3fi9_A Malate dehydrogenase; s 92.8 0.21 7.3E-06 51.6 7.8 78 10-113 6-86 (343)
187 4e6p_A Probable sorbitol dehyd 92.7 0.26 9E-06 47.9 8.1 36 9-45 5-41 (259)
188 3v2h_A D-beta-hydroxybutyrate 92.7 0.33 1.1E-05 48.1 8.9 35 9-44 22-57 (281)
189 3tsc_A Putative oxidoreductase 92.7 0.35 1.2E-05 47.5 9.1 93 9-110 8-108 (277)
190 1rpn_A GDP-mannose 4,6-dehydra 92.7 0.39 1.3E-05 48.0 9.6 36 9-45 11-47 (335)
191 2bd0_A Sepiapterin reductase; 92.7 0.38 1.3E-05 45.9 9.1 33 12-44 2-41 (244)
192 4iin_A 3-ketoacyl-acyl carrier 92.6 0.26 9E-06 48.3 7.9 63 10-93 27-90 (271)
193 1oaa_A Sepiapterin reductase; 92.6 0.22 7.6E-06 48.4 7.3 64 10-93 4-71 (259)
194 4aj2_A L-lactate dehydrogenase 92.6 0.35 1.2E-05 49.7 9.0 78 8-112 15-96 (331)
195 3afn_B Carbonyl reductase; alp 92.6 0.31 1.1E-05 46.8 8.3 35 10-45 5-40 (258)
196 3l77_A Short-chain alcohol deh 92.5 0.35 1.2E-05 46.0 8.6 78 12-110 2-87 (235)
197 3v8b_A Putative dehydrogenase, 92.5 0.35 1.2E-05 47.9 8.8 35 9-44 25-60 (283)
198 1gy8_A UDP-galactose 4-epimera 92.5 0.67 2.3E-05 47.5 11.3 33 12-45 2-36 (397)
199 4da9_A Short-chain dehydrogena 92.5 0.47 1.6E-05 46.9 9.7 80 10-110 27-114 (280)
200 3ai3_A NADPH-sorbose reductase 92.5 0.31 1.1E-05 47.4 8.2 34 10-44 5-39 (263)
201 4ibo_A Gluconate dehydrogenase 92.5 0.21 7.3E-06 49.2 7.1 80 9-110 23-110 (271)
202 3e03_A Short chain dehydrogena 92.5 0.52 1.8E-05 46.3 10.0 36 10-46 4-40 (274)
203 1gee_A Glucose 1-dehydrogenase 92.5 0.35 1.2E-05 46.7 8.6 35 9-44 4-39 (261)
204 3pxx_A Carveol dehydrogenase; 92.5 0.5 1.7E-05 46.4 9.8 92 9-110 7-106 (287)
205 2zyd_A 6-phosphogluconate dehy 92.5 0.25 8.7E-06 53.3 8.2 36 8-44 11-46 (480)
206 1vpd_A Tartronate semialdehyde 92.5 0.32 1.1E-05 48.3 8.5 31 13-44 6-36 (299)
207 3r1i_A Short-chain type dehydr 92.4 0.27 9.1E-06 48.7 7.8 35 9-44 29-64 (276)
208 3nep_X Malate dehydrogenase; h 92.4 0.46 1.6E-05 48.4 9.6 74 13-113 1-79 (314)
209 1yxm_A Pecra, peroxisomal tran 92.4 0.35 1.2E-05 48.0 8.6 83 9-111 15-108 (303)
210 3tox_A Short chain dehydrogena 92.4 0.18 6.2E-06 50.1 6.4 80 9-110 5-92 (280)
211 4egf_A L-xylulose reductase; s 92.4 0.26 8.9E-06 48.3 7.5 81 9-110 17-105 (266)
212 3fbt_A Chorismate mutase and s 92.4 0.1 3.4E-06 52.5 4.5 34 10-43 120-153 (282)
213 1oc2_A DTDP-glucose 4,6-dehydr 92.3 0.62 2.1E-05 46.8 10.6 108 13-142 5-131 (348)
214 1vl6_A Malate oxidoreductase; 92.3 0.12 4.3E-06 54.1 5.3 37 9-45 189-225 (388)
215 4dll_A 2-hydroxy-3-oxopropiona 92.3 0.31 1.1E-05 49.4 8.3 35 10-45 29-63 (320)
216 3kkj_A Amine oxidase, flavin-c 92.3 0.12 4.2E-06 47.9 4.8 32 12-44 2-33 (336)
217 2pd6_A Estradiol 17-beta-dehyd 92.3 0.16 5.4E-06 49.2 5.8 35 10-45 5-40 (264)
218 1xq6_A Unknown protein; struct 92.3 0.26 9E-06 46.8 7.3 35 11-45 3-39 (253)
219 2gdz_A NAD+-dependent 15-hydro 92.3 0.26 8.9E-06 48.1 7.4 82 10-111 5-94 (267)
220 3st7_A Capsular polysaccharide 92.3 0.23 8E-06 50.8 7.4 33 13-45 1-34 (369)
221 2xxj_A L-LDH, L-lactate dehydr 92.3 0.35 1.2E-05 49.1 8.6 72 13-112 1-76 (310)
222 3ldh_A Lactate dehydrogenase; 92.3 0.46 1.6E-05 48.8 9.5 74 12-112 21-98 (330)
223 2bgk_A Rhizome secoisolaricire 92.3 0.4 1.4E-05 46.7 8.8 35 9-44 13-48 (278)
224 1vl0_A DTDP-4-dehydrorhamnose 92.3 0.21 7.3E-06 49.0 6.8 36 9-45 9-45 (292)
225 3lyl_A 3-oxoacyl-(acyl-carrier 92.2 0.28 9.6E-06 47.1 7.5 62 10-93 3-65 (247)
226 3sx2_A Putative 3-ketoacyl-(ac 92.2 0.68 2.3E-05 45.3 10.4 93 8-110 9-109 (278)
227 1yb1_A 17-beta-hydroxysteroid 92.2 0.41 1.4E-05 46.9 8.8 34 10-44 29-63 (272)
228 3ggo_A Prephenate dehydrogenas 92.2 0.75 2.6E-05 46.6 10.9 92 13-136 34-129 (314)
229 3imf_A Short chain dehydrogena 92.2 0.24 8E-06 48.3 6.9 35 9-44 3-38 (257)
230 3qlj_A Short chain dehydrogena 92.2 0.4 1.4E-05 48.4 8.9 73 9-93 24-97 (322)
231 3ftp_A 3-oxoacyl-[acyl-carrier 92.2 0.27 9.2E-06 48.5 7.4 35 9-44 25-60 (270)
232 3pdu_A 3-hydroxyisobutyrate de 92.2 0.25 8.7E-06 49.0 7.3 32 13-45 2-33 (287)
233 1sny_A Sniffer CG10964-PA; alp 92.2 0.28 9.5E-06 47.6 7.4 40 6-45 15-57 (267)
234 3uve_A Carveol dehydrogenase ( 92.1 0.64 2.2E-05 45.8 10.2 96 9-110 8-111 (286)
235 3rih_A Short chain dehydrogena 92.1 0.19 6.6E-06 50.3 6.3 35 10-45 39-74 (293)
236 3v2g_A 3-oxoacyl-[acyl-carrier 92.1 0.44 1.5E-05 46.9 8.9 80 10-110 29-116 (271)
237 4f6c_A AUSA reductase domain p 92.1 0.38 1.3E-05 50.3 8.9 110 13-142 70-202 (427)
238 3g0o_A 3-hydroxyisobutyrate de 92.1 0.38 1.3E-05 48.2 8.5 34 11-45 6-39 (303)
239 2r6j_A Eugenol synthase 1; phe 92.1 0.5 1.7E-05 47.0 9.4 95 12-130 11-109 (318)
240 1zem_A Xylitol dehydrogenase; 92.1 0.47 1.6E-05 46.2 9.0 35 9-44 4-39 (262)
241 1x7d_A Ornithine cyclodeaminas 92.1 0.49 1.7E-05 48.9 9.5 76 11-113 128-204 (350)
242 3ksu_A 3-oxoacyl-acyl carrier 92.0 0.29 1E-05 47.9 7.4 83 9-110 8-98 (262)
243 3gg2_A Sugar dehydrogenase, UD 92.0 0.28 9.6E-06 52.5 7.8 34 13-47 3-36 (450)
244 1spx_A Short-chain reductase f 91.9 0.31 1.1E-05 47.8 7.5 34 10-44 4-38 (278)
245 1xq1_A Putative tropinone redu 91.9 0.37 1.3E-05 46.7 8.0 34 10-44 12-46 (266)
246 2rhc_B Actinorhodin polyketide 91.9 0.51 1.7E-05 46.5 9.0 34 10-44 20-54 (277)
247 2iz1_A 6-phosphogluconate dehy 91.9 0.32 1.1E-05 52.3 8.1 94 12-136 5-104 (474)
248 1y6j_A L-lactate dehydrogenase 91.8 0.28 9.7E-06 49.9 7.3 34 12-45 7-41 (318)
249 3ay3_A NAD-dependent epimerase 91.8 0.24 8.2E-06 48.1 6.5 97 13-140 3-114 (267)
250 2zcu_A Uncharacterized oxidore 91.8 0.22 7.5E-06 48.6 6.2 97 14-138 1-106 (286)
251 1vl8_A Gluconate 5-dehydrogena 91.8 0.34 1.2E-05 47.5 7.6 37 7-44 16-53 (267)
252 3h5n_A MCCB protein; ubiquitin 91.8 0.14 4.8E-06 53.1 4.9 59 374-436 291-352 (353)
253 1geg_A Acetoin reductase; SDR 91.7 0.56 1.9E-05 45.4 9.1 32 12-44 2-34 (256)
254 2a9f_A Putative malic enzyme ( 91.7 0.14 4.7E-06 53.9 4.8 38 9-46 185-222 (398)
255 3ijr_A Oxidoreductase, short c 91.7 0.47 1.6E-05 47.2 8.6 36 9-45 44-80 (291)
256 4iiu_A 3-oxoacyl-[acyl-carrier 91.7 0.36 1.2E-05 47.1 7.6 35 7-42 21-56 (267)
257 3tzq_B Short-chain type dehydr 91.7 0.33 1.1E-05 47.7 7.4 36 9-45 8-44 (271)
258 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.6 0.32 1.1E-05 47.3 7.1 35 9-44 18-53 (274)
259 2hq1_A Glucose/ribitol dehydro 91.6 0.53 1.8E-05 44.9 8.6 33 10-43 3-36 (247)
260 2i99_A MU-crystallin homolog; 91.6 0.29 9.9E-06 49.6 7.1 34 10-43 133-167 (312)
261 2ahr_A Putative pyrroline carb 91.6 0.39 1.3E-05 46.7 7.8 30 13-43 4-33 (259)
262 3osu_A 3-oxoacyl-[acyl-carrier 91.5 0.41 1.4E-05 46.1 7.8 62 11-93 3-65 (246)
263 1guz_A Malate dehydrogenase; o 91.5 0.84 2.9E-05 46.1 10.4 33 13-45 1-34 (310)
264 1w6u_A 2,4-dienoyl-COA reducta 91.5 0.38 1.3E-05 47.6 7.7 35 9-44 23-58 (302)
265 3qy9_A DHPR, dihydrodipicolina 91.5 0.49 1.7E-05 46.4 8.3 82 13-139 4-86 (243)
266 4eso_A Putative oxidoreductase 91.5 0.4 1.4E-05 46.7 7.7 36 9-45 5-41 (255)
267 1nyt_A Shikimate 5-dehydrogena 91.5 0.15 5.3E-06 50.5 4.7 33 10-43 117-149 (271)
268 3gvc_A Oxidoreductase, probabl 91.5 0.28 9.4E-06 48.6 6.6 35 9-44 26-61 (277)
269 2a35_A Hypothetical protein PA 91.4 0.37 1.3E-05 44.7 7.2 35 11-45 4-40 (215)
270 2pnf_A 3-oxoacyl-[acyl-carrier 91.4 0.38 1.3E-05 45.9 7.4 34 10-44 5-39 (248)
271 3un1_A Probable oxidoreductase 91.4 0.31 1.1E-05 47.7 6.8 56 9-67 25-81 (260)
272 3rd5_A Mypaa.01249.C; ssgcid, 91.4 0.28 9.6E-06 48.6 6.6 36 9-45 13-49 (291)
273 4dgs_A Dehydrogenase; structur 91.4 0.35 1.2E-05 49.8 7.4 90 9-138 168-261 (340)
274 1ae1_A Tropinone reductase-I; 91.4 0.63 2.1E-05 45.6 9.1 34 10-44 19-53 (273)
275 3ak4_A NADH-dependent quinucli 91.3 0.27 9.3E-06 47.8 6.3 35 10-45 10-45 (263)
276 3r3s_A Oxidoreductase; structu 91.3 0.42 1.4E-05 47.7 7.8 35 9-44 46-81 (294)
277 4dyv_A Short-chain dehydrogena 91.3 0.39 1.3E-05 47.4 7.5 36 9-45 25-61 (272)
278 2o23_A HADH2 protein; HSD17B10 91.3 0.44 1.5E-05 46.0 7.8 35 10-45 10-45 (265)
279 2x9g_A PTR1, pteridine reducta 91.3 0.48 1.7E-05 46.8 8.2 37 7-44 18-55 (288)
280 3kvo_A Hydroxysteroid dehydrog 91.3 0.69 2.3E-05 47.5 9.5 87 9-110 42-136 (346)
281 2yy7_A L-threonine dehydrogena 91.2 0.34 1.2E-05 47.8 7.0 33 12-45 2-37 (312)
282 3obb_A Probable 3-hydroxyisobu 91.2 1 3.4E-05 45.4 10.5 116 13-139 4-126 (300)
283 4gbj_A 6-phosphogluconate dehy 91.2 0.16 5.4E-06 51.2 4.5 118 11-139 4-126 (297)
284 4dqx_A Probable oxidoreductase 91.2 0.55 1.9E-05 46.4 8.4 34 10-44 25-59 (277)
285 4fn4_A Short chain dehydrogena 91.1 0.75 2.6E-05 45.3 9.3 63 9-93 4-67 (254)
286 3grp_A 3-oxoacyl-(acyl carrier 91.1 0.44 1.5E-05 46.8 7.6 35 9-44 24-59 (266)
287 1z7e_A Protein aRNA; rossmann 91.1 0.68 2.3E-05 51.6 10.0 106 9-141 312-437 (660)
288 3n74_A 3-ketoacyl-(acyl-carrie 91.1 0.53 1.8E-05 45.5 8.1 36 9-45 6-42 (261)
289 1gpj_A Glutamyl-tRNA reductase 91.1 0.18 6E-06 53.2 4.9 34 10-43 165-198 (404)
290 1npy_A Hypothetical shikimate 91.1 0.18 6.1E-06 50.3 4.7 68 11-113 118-185 (271)
291 2uvd_A 3-oxoacyl-(acyl-carrier 91.0 0.5 1.7E-05 45.5 7.8 33 10-43 2-35 (246)
292 2dvm_A Malic enzyme, 439AA lon 91.0 0.17 5.7E-06 54.1 4.7 35 9-43 183-219 (439)
293 2q2v_A Beta-D-hydroxybutyrate 91.0 0.5 1.7E-05 45.8 7.8 33 10-43 2-35 (255)
294 3qha_A Putative oxidoreductase 91.0 0.41 1.4E-05 47.9 7.3 33 12-45 15-47 (296)
295 3s55_A Putative short-chain de 91.0 1 3.6E-05 44.1 10.3 92 9-110 7-106 (281)
296 1hdc_A 3-alpha, 20 beta-hydrox 91.0 0.37 1.3E-05 46.8 6.8 35 10-45 3-38 (254)
297 1lnq_A MTHK channels, potassiu 91.0 0.37 1.3E-05 49.0 7.1 88 12-129 115-203 (336)
298 3l6e_A Oxidoreductase, short-c 90.9 0.59 2E-05 44.9 8.1 33 11-44 2-35 (235)
299 3ajr_A NDP-sugar epimerase; L- 90.9 0.55 1.9E-05 46.5 8.2 32 14-45 1-34 (317)
300 2qq5_A DHRS1, dehydrogenase/re 90.9 0.52 1.8E-05 45.7 7.9 34 10-44 3-37 (260)
301 3cxt_A Dehydrogenase with diff 90.9 0.5 1.7E-05 47.0 7.9 34 10-44 32-66 (291)
302 1yo6_A Putative carbonyl reduc 90.9 0.31 1E-05 46.4 6.1 35 11-45 2-38 (250)
303 3a28_C L-2.3-butanediol dehydr 90.9 0.79 2.7E-05 44.4 9.1 32 12-44 2-34 (258)
304 1xkq_A Short-chain reductase f 90.9 0.48 1.6E-05 46.6 7.6 34 10-44 4-38 (280)
305 2cfc_A 2-(R)-hydroxypropyl-COM 90.8 0.64 2.2E-05 44.4 8.3 32 12-44 2-34 (250)
306 4dmm_A 3-oxoacyl-[acyl-carrier 90.8 0.55 1.9E-05 46.1 8.1 33 10-43 26-59 (269)
307 1omo_A Alanine dehydrogenase; 90.8 0.76 2.6E-05 46.8 9.3 73 11-113 124-197 (322)
308 1eq2_A ADP-L-glycero-D-mannohe 90.8 0.35 1.2E-05 47.7 6.6 32 14-45 1-33 (310)
309 3k96_A Glycerol-3-phosphate de 90.8 0.39 1.4E-05 49.7 7.2 89 12-123 29-119 (356)
310 3hdj_A Probable ornithine cycl 90.8 0.36 1.2E-05 49.1 6.8 72 12-113 121-193 (313)
311 4huj_A Uncharacterized protein 90.8 0.35 1.2E-05 46.2 6.3 29 12-41 23-51 (220)
312 4dry_A 3-oxoacyl-[acyl-carrier 90.8 0.39 1.3E-05 47.6 6.9 35 9-44 30-65 (281)
313 1db3_A GDP-mannose 4,6-dehydra 90.8 0.66 2.3E-05 47.0 8.8 32 13-45 2-34 (372)
314 1nff_A Putative oxidoreductase 90.8 0.63 2.2E-05 45.3 8.3 35 10-45 5-40 (260)
315 4f3y_A DHPR, dihydrodipicolina 90.7 0.72 2.5E-05 46.0 8.8 100 11-139 6-107 (272)
316 1edo_A Beta-keto acyl carrier 90.7 0.59 2E-05 44.5 7.9 28 13-41 2-30 (244)
317 2c07_A 3-oxoacyl-(acyl-carrier 90.7 0.56 1.9E-05 46.3 7.9 33 10-43 42-75 (285)
318 3ijp_A DHPR, dihydrodipicolina 90.6 0.84 2.9E-05 45.9 9.2 106 5-139 13-122 (288)
319 1e7w_A Pteridine reductase; di 90.5 0.87 3E-05 45.1 9.3 34 9-43 6-40 (291)
320 1lld_A L-lactate dehydrogenase 90.5 0.24 8.2E-06 49.9 5.2 35 11-45 6-41 (319)
321 1p77_A Shikimate 5-dehydrogena 90.5 0.17 5.7E-06 50.3 3.9 74 10-114 117-191 (272)
322 2b4q_A Rhamnolipids biosynthes 90.5 0.57 1.9E-05 46.2 7.8 34 10-44 27-61 (276)
323 3uf0_A Short-chain dehydrogena 90.5 0.91 3.1E-05 44.6 9.3 33 10-43 29-62 (273)
324 2p4q_A 6-phosphogluconate dehy 90.4 0.89 3.1E-05 49.2 9.9 34 11-45 9-42 (497)
325 2nwq_A Probable short-chain de 90.4 0.47 1.6E-05 46.8 7.0 35 8-44 18-53 (272)
326 1jw9_B Molybdopterin biosynthe 90.4 0.25 8.5E-06 48.5 5.0 57 374-434 190-248 (249)
327 3rc1_A Sugar 3-ketoreductase; 90.4 0.62 2.1E-05 47.7 8.2 37 9-45 24-62 (350)
328 3b1f_A Putative prephenate deh 90.3 1 3.6E-05 44.4 9.6 93 11-135 5-101 (290)
329 2pk3_A GDP-6-deoxy-D-LYXO-4-he 90.3 1.2 4E-05 44.2 9.9 36 9-45 9-45 (321)
330 3f1l_A Uncharacterized oxidore 90.2 0.47 1.6E-05 46.0 6.8 37 8-45 8-45 (252)
331 4g65_A TRK system potassium up 90.2 1.1 3.8E-05 47.9 10.3 96 12-134 235-331 (461)
332 4fs3_A Enoyl-[acyl-carrier-pro 90.2 0.64 2.2E-05 45.4 7.8 34 10-44 4-40 (256)
333 3t7c_A Carveol dehydrogenase; 90.2 0.91 3.1E-05 45.2 9.1 36 9-45 25-61 (299)
334 1z45_A GAL10 bifunctional prot 90.1 1.1 3.9E-05 50.0 10.8 37 7-44 6-43 (699)
335 2ywl_A Thioredoxin reductase r 90.1 0.29 1E-05 44.5 5.0 33 13-46 2-34 (180)
336 4fgw_A Glycerol-3-phosphate de 90.1 0.31 1E-05 51.3 5.7 100 13-134 35-150 (391)
337 3oec_A Carveol dehydrogenase ( 90.1 0.92 3.2E-05 45.6 9.2 92 9-110 43-142 (317)
338 3d4o_A Dipicolinate synthase s 90.1 0.26 9E-06 49.3 5.0 35 9-44 152-186 (293)
339 1xhl_A Short-chain dehydrogena 90.1 0.58 2E-05 46.7 7.5 34 10-44 24-58 (297)
340 3i83_A 2-dehydropantoate 2-red 90.1 0.26 9E-06 49.8 5.0 33 12-45 2-34 (320)
341 4gx0_A TRKA domain protein; me 90.0 1.3 4.4E-05 48.3 10.9 86 13-130 349-435 (565)
342 1kew_A RMLB;, DTDP-D-glucose 4 89.9 1.4 4.6E-05 44.5 10.3 31 14-45 2-34 (361)
343 3h8v_A Ubiquitin-like modifier 89.9 0.17 5.8E-06 51.2 3.4 61 371-435 211-273 (292)
344 3g17_A Similar to 2-dehydropan 89.9 0.23 7.9E-06 49.6 4.4 33 12-45 2-34 (294)
345 1zk4_A R-specific alcohol dehy 89.9 0.56 1.9E-05 44.9 7.0 36 9-45 3-39 (251)
346 1udb_A Epimerase, UDP-galactos 89.8 1.7 5.7E-05 43.4 10.8 30 14-44 2-32 (338)
347 1o6z_A MDH, malate dehydrogena 89.8 1 3.5E-05 45.3 9.2 72 13-112 1-79 (303)
348 3ppi_A 3-hydroxyacyl-COA dehyd 89.8 0.6 2.1E-05 45.8 7.3 35 9-44 27-62 (281)
349 3is3_A 17BETA-hydroxysteroid d 89.8 0.61 2.1E-05 45.6 7.3 34 9-43 15-49 (270)
350 1hye_A L-lactate/malate dehydr 89.8 1 3.5E-05 45.6 9.1 32 13-44 1-34 (313)
351 1vkn_A N-acetyl-gamma-glutamyl 89.7 0.62 2.1E-05 48.2 7.5 93 13-135 14-107 (351)
352 3op4_A 3-oxoacyl-[acyl-carrier 89.7 0.67 2.3E-05 44.8 7.4 34 10-44 7-41 (248)
353 2rir_A Dipicolinate synthase, 89.7 0.29 1E-05 49.1 5.0 36 9-45 154-189 (300)
354 3u9l_A 3-oxoacyl-[acyl-carrier 89.7 0.93 3.2E-05 45.9 8.8 84 10-110 3-94 (324)
355 1x1t_A D(-)-3-hydroxybutyrate 89.7 0.65 2.2E-05 45.0 7.3 34 10-44 2-36 (260)
356 3ctm_A Carbonyl reductase; alc 89.6 0.51 1.7E-05 46.1 6.6 34 10-44 32-66 (279)
357 3f9i_A 3-oxoacyl-[acyl-carrier 89.6 0.54 1.8E-05 45.1 6.7 35 9-44 11-46 (249)
358 3fef_A Putative glucosidase LP 89.6 0.38 1.3E-05 51.5 5.9 94 11-129 4-103 (450)
359 3edm_A Short chain dehydrogena 89.5 0.66 2.3E-05 45.1 7.3 33 9-42 5-38 (259)
360 4hb9_A Similarities with proba 89.5 0.31 1.1E-05 49.8 5.1 33 12-45 1-33 (412)
361 2ggs_A 273AA long hypothetical 89.5 1 3.5E-05 43.4 8.6 31 13-45 1-32 (273)
362 2pgd_A 6-phosphogluconate dehy 89.5 1.5 5.2E-05 47.1 10.8 31 13-44 3-33 (482)
363 2dtx_A Glucose 1-dehydrogenase 89.5 0.57 2E-05 45.8 6.8 37 9-46 5-42 (264)
364 3ghy_A Ketopantoate reductase 89.5 0.3 1E-05 49.8 4.9 31 12-43 3-33 (335)
365 1yj8_A Glycerol-3-phosphate de 89.4 0.42 1.4E-05 49.5 6.1 90 13-123 22-123 (375)
366 3tpc_A Short chain alcohol deh 89.4 0.54 1.8E-05 45.5 6.5 35 10-45 5-40 (257)
367 3hn2_A 2-dehydropantoate 2-red 89.4 0.25 8.5E-06 49.8 4.2 33 12-45 2-34 (312)
368 1u8x_X Maltose-6'-phosphate gl 89.4 1.2 3.9E-05 48.1 9.6 93 12-130 28-131 (472)
369 3p19_A BFPVVD8, putative blue 89.4 0.82 2.8E-05 44.8 7.9 36 9-45 13-49 (266)
370 1nvt_A Shikimate 5'-dehydrogen 89.4 0.21 7E-06 50.0 3.5 32 10-43 126-157 (287)
371 1hxh_A 3BETA/17BETA-hydroxyste 89.3 0.52 1.8E-05 45.6 6.3 35 9-44 3-38 (253)
372 1h5q_A NADP-dependent mannitol 89.3 0.51 1.7E-05 45.5 6.2 34 10-44 12-46 (265)
373 1ks9_A KPA reductase;, 2-dehyd 89.2 0.34 1.2E-05 47.6 5.0 94 13-134 1-96 (291)
374 3i4f_A 3-oxoacyl-[acyl-carrier 89.2 0.57 1.9E-05 45.4 6.5 33 10-43 5-38 (264)
375 3oig_A Enoyl-[acyl-carrier-pro 89.2 0.91 3.1E-05 44.0 8.0 34 10-44 5-41 (266)
376 2qhx_A Pteridine reductase 1; 89.2 1.2 4.2E-05 45.0 9.3 33 10-43 44-77 (328)
377 3oid_A Enoyl-[acyl-carrier-pro 89.1 0.68 2.3E-05 45.1 7.1 61 11-93 3-65 (258)
378 3u5t_A 3-oxoacyl-[acyl-carrier 89.1 1.3 4.6E-05 43.3 9.2 33 10-43 25-58 (267)
379 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.1 1.2 4E-05 48.0 9.5 31 13-44 2-32 (478)
380 2ehd_A Oxidoreductase, oxidore 89.1 0.57 1.9E-05 44.4 6.3 34 11-45 4-38 (234)
381 1dih_A Dihydrodipicolinate red 89.1 1.3 4.3E-05 44.1 9.0 99 12-139 5-106 (273)
382 1mld_A Malate dehydrogenase; o 89.0 0.99 3.4E-05 45.8 8.4 34 13-46 1-36 (314)
383 1g0o_A Trihydroxynaphthalene r 88.9 0.88 3E-05 44.8 7.8 34 10-44 27-61 (283)
384 3grk_A Enoyl-(acyl-carrier-pro 88.9 0.98 3.4E-05 44.9 8.2 35 9-44 28-65 (293)
385 2wsb_A Galactitol dehydrogenas 88.9 1.1 3.7E-05 42.8 8.3 35 10-45 9-44 (254)
386 1t2a_A GDP-mannose 4,6 dehydra 88.7 1.8 6E-05 44.0 10.2 32 13-45 25-57 (375)
387 1yde_A Retinal dehydrogenase/r 88.7 0.95 3.3E-05 44.3 7.8 36 9-45 6-42 (270)
388 2ew2_A 2-dehydropantoate 2-red 88.6 0.4 1.4E-05 47.6 5.0 31 13-44 4-34 (316)
389 2p91_A Enoyl-[acyl-carrier-pro 88.6 0.71 2.4E-05 45.5 6.8 35 10-45 19-56 (285)
390 1np3_A Ketol-acid reductoisome 88.6 0.47 1.6E-05 48.6 5.7 93 7-134 11-106 (338)
391 1xgk_A Nitrogen metabolite rep 88.6 1.8 6.2E-05 44.1 10.1 101 11-137 4-114 (352)
392 3guy_A Short-chain dehydrogena 88.5 1 3.4E-05 42.7 7.6 32 13-45 2-34 (230)
393 3ek2_A Enoyl-(acyl-carrier-pro 88.5 0.65 2.2E-05 45.0 6.4 37 8-45 10-49 (271)
394 1n7h_A GDP-D-mannose-4,6-dehyd 88.5 1.2 4E-05 45.5 8.6 32 13-45 29-61 (381)
395 3hhp_A Malate dehydrogenase; M 88.4 1.7 5.7E-05 44.2 9.6 75 13-112 1-78 (312)
396 2vhw_A Alanine dehydrogenase; 88.4 0.4 1.4E-05 50.0 5.0 35 9-44 165-199 (377)
397 3ego_A Probable 2-dehydropanto 88.4 0.4 1.4E-05 48.3 4.9 31 12-44 2-32 (307)
398 1f0y_A HCDH, L-3-hydroxyacyl-C 88.3 0.42 1.4E-05 47.8 5.0 32 13-45 16-47 (302)
399 2vns_A Metalloreductase steap3 88.3 0.48 1.6E-05 45.1 5.1 32 12-44 28-59 (215)
400 3oh8_A Nucleoside-diphosphate 88.3 2.3 7.9E-05 45.8 11.2 33 12-45 147-180 (516)
401 2a4k_A 3-oxoacyl-[acyl carrier 88.3 0.84 2.9E-05 44.6 7.0 34 10-44 4-38 (263)
402 3dii_A Short-chain dehydrogena 88.2 1.5 5.2E-05 42.1 8.8 33 12-45 2-35 (247)
403 1pjc_A Protein (L-alanine dehy 88.1 0.42 1.5E-05 49.4 5.0 34 10-44 165-198 (361)
404 3uuw_A Putative oxidoreductase 88.1 1.4 4.9E-05 43.8 8.8 35 10-44 4-40 (308)
405 2nqt_A N-acetyl-gamma-glutamyl 88.1 0.35 1.2E-05 50.1 4.3 98 12-137 9-112 (352)
406 2c29_D Dihydroflavonol 4-reduc 88.0 1.8 6.1E-05 43.2 9.5 79 11-110 4-84 (337)
407 1qsg_A Enoyl-[acyl-carrier-pro 87.9 1 3.4E-05 43.8 7.4 35 10-45 7-44 (265)
408 3ip1_A Alcohol dehydrogenase, 87.9 1.1 3.7E-05 46.8 8.1 32 12-43 214-245 (404)
409 2wyu_A Enoyl-[acyl carrier pro 87.9 0.93 3.2E-05 44.0 7.1 35 10-45 6-43 (261)
410 1obb_A Maltase, alpha-glucosid 87.9 0.77 2.6E-05 49.5 6.9 93 11-129 2-105 (480)
411 3gdg_A Probable NADP-dependent 87.8 0.55 1.9E-05 45.6 5.3 35 9-44 17-54 (267)
412 3k31_A Enoyl-(acyl-carrier-pro 87.7 1.1 3.7E-05 44.6 7.6 35 9-44 27-64 (296)
413 4g81_D Putative hexonate dehyd 87.7 0.99 3.4E-05 44.5 7.2 62 10-93 7-69 (255)
414 2eez_A Alanine dehydrogenase; 87.7 0.46 1.6E-05 49.2 5.0 34 10-44 164-197 (369)
415 3gem_A Short chain dehydrogena 87.7 0.86 2.9E-05 44.5 6.7 36 9-45 24-60 (260)
416 1bg6_A N-(1-D-carboxylethyl)-L 87.7 0.5 1.7E-05 48.0 5.1 33 12-45 4-36 (359)
417 3icc_A Putative 3-oxoacyl-(acy 87.6 1.1 3.6E-05 43.0 7.3 63 10-93 5-68 (255)
418 3ond_A Adenosylhomocysteinase; 87.4 0.46 1.6E-05 51.3 4.8 35 10-45 263-297 (488)
419 3ezl_A Acetoacetyl-COA reducta 87.4 0.55 1.9E-05 45.3 5.0 38 5-43 6-44 (256)
420 2vt3_A REX, redox-sensing tran 87.3 1.7 5.8E-05 41.7 8.4 87 12-132 85-173 (215)
421 4e3z_A Putative oxidoreductase 87.3 1.2 4.1E-05 43.5 7.5 62 11-93 25-87 (272)
422 2cul_A Glucose-inhibited divis 87.3 0.62 2.1E-05 44.5 5.3 34 11-45 2-35 (232)
423 3gk3_A Acetoacetyl-COA reducta 87.3 1.2 4.3E-05 43.3 7.6 34 9-43 22-56 (269)
424 2d1y_A Hypothetical protein TT 87.3 1.5 5.2E-05 42.3 8.2 35 10-45 4-39 (256)
425 4gwg_A 6-phosphogluconate dehy 87.3 0.61 2.1E-05 50.4 5.8 34 12-46 4-37 (484)
426 3pwk_A Aspartate-semialdehyde 87.3 1.1 3.8E-05 46.6 7.5 92 12-136 2-96 (366)
427 4fgs_A Probable dehydrogenase 87.3 1.3 4.3E-05 44.2 7.7 37 8-45 25-62 (273)
428 1i24_A Sulfolipid biosynthesis 87.2 3.5 0.00012 42.1 11.4 34 11-45 10-44 (404)
429 3m6i_A L-arabinitol 4-dehydrog 87.2 2 7E-05 43.8 9.5 33 12-44 180-212 (363)
430 3fpc_A NADP-dependent alcohol 87.1 0.52 1.8E-05 48.1 4.9 33 12-44 167-199 (352)
431 3ec7_A Putative dehydrogenase; 87.1 1.8 6.3E-05 44.3 9.1 38 7-44 18-57 (357)
432 1yqg_A Pyrroline-5-carboxylate 87.1 0.59 2E-05 45.4 5.1 31 13-43 1-31 (263)
433 2f1k_A Prephenate dehydrogenas 87.1 0.57 1.9E-05 46.0 5.0 89 13-135 1-91 (279)
434 1gq2_A Malic enzyme; oxidoredu 87.0 2.1 7.2E-05 46.6 9.6 74 8-86 278-367 (555)
435 4a2c_A Galactitol-1-phosphate 86.9 0.81 2.8E-05 46.3 6.2 34 11-44 160-193 (346)
436 1yvv_A Amine oxidase, flavin-c 86.9 0.55 1.9E-05 46.8 4.8 33 12-45 2-34 (336)
437 3tl3_A Short-chain type dehydr 86.8 0.86 2.9E-05 44.1 6.1 35 9-44 6-41 (257)
438 2v6g_A Progesterone 5-beta-red 86.8 0.95 3.2E-05 45.6 6.7 33 13-45 2-39 (364)
439 3nrc_A Enoyl-[acyl-carrier-pro 86.8 0.64 2.2E-05 45.7 5.2 37 8-45 22-61 (280)
440 2z5l_A Tylkr1, tylactone synth 86.7 1.8 6E-05 47.0 9.1 81 12-110 259-342 (511)
441 3kzv_A Uncharacterized oxidore 86.7 1.5 5.2E-05 42.3 7.8 33 12-44 2-36 (254)
442 2pd4_A Enoyl-[acyl-carrier-pro 86.6 1.1 3.7E-05 43.9 6.8 35 10-45 4-41 (275)
443 2izz_A Pyrroline-5-carboxylate 86.6 0.57 2E-05 47.5 4.8 82 10-123 20-104 (322)
444 4ea9_A Perosamine N-acetyltran 86.5 3.7 0.00013 38.8 10.3 86 11-130 11-97 (220)
445 3rp8_A Flavoprotein monooxygen 86.5 0.64 2.2E-05 48.0 5.3 39 7-46 18-56 (407)
446 1zud_1 Adenylyltransferase THI 86.5 0.86 3E-05 44.6 5.9 58 375-436 188-246 (251)
447 3euw_A MYO-inositol dehydrogen 86.4 2.6 9E-05 42.6 9.7 86 13-132 5-93 (344)
448 1c0p_A D-amino acid oxidase; a 86.3 0.72 2.5E-05 46.8 5.5 36 12-48 6-41 (363)
449 2g5c_A Prephenate dehydrogenas 86.2 0.71 2.4E-05 45.4 5.2 91 13-135 2-96 (281)
450 1uay_A Type II 3-hydroxyacyl-C 86.1 1.4 4.8E-05 41.6 7.1 34 12-46 2-36 (242)
451 3zv4_A CIS-2,3-dihydrobiphenyl 86.1 0.97 3.3E-05 44.5 6.2 34 10-44 3-37 (281)
452 3q2i_A Dehydrogenase; rossmann 86.1 1.5 5E-05 44.8 7.7 33 12-44 13-47 (354)
453 3db2_A Putative NADPH-dependen 86.1 1.9 6.6E-05 43.9 8.6 33 12-44 5-38 (354)
454 3dje_A Fructosyl amine: oxygen 86.1 0.74 2.5E-05 48.0 5.5 37 12-48 6-42 (438)
455 1xyg_A Putative N-acetyl-gamma 86.0 0.59 2E-05 48.5 4.7 98 10-135 14-112 (359)
456 1iuk_A Hypothetical protein TT 86.0 2.5 8.7E-05 37.5 8.3 40 5-45 5-49 (140)
457 2fr1_A Erythromycin synthase, 86.0 2.1 7.1E-05 46.1 9.1 81 12-110 226-313 (486)
458 3nv9_A Malic enzyme; rossmann 85.9 0.57 1.9E-05 50.0 4.4 39 9-47 216-256 (487)
459 3m1a_A Putative dehydrogenase; 85.9 0.7 2.4E-05 45.3 4.9 35 10-45 3-38 (281)
460 2r00_A Aspartate-semialdehyde 85.8 2 6.8E-05 44.0 8.4 94 12-136 3-97 (336)
461 3fbs_A Oxidoreductase; structu 85.7 2.9 9.8E-05 40.4 9.3 34 12-46 2-35 (297)
462 4hkt_A Inositol 2-dehydrogenas 85.7 2.1 7.2E-05 43.1 8.5 33 12-44 3-36 (331)
463 2ixa_A Alpha-N-acetylgalactosa 85.6 2 6.7E-05 45.5 8.6 99 9-132 17-119 (444)
464 1o0s_A NAD-ME, NAD-dependent m 85.6 1.8 6.1E-05 47.5 8.2 73 9-86 317-405 (605)
465 4ej6_A Putative zinc-binding d 85.5 0.93 3.2E-05 46.7 5.9 32 12-43 183-214 (370)
466 1z82_A Glycerol-3-phosphate de 85.5 0.75 2.5E-05 46.7 5.1 33 11-44 13-45 (335)
467 3c96_A Flavin-containing monoo 85.5 0.8 2.7E-05 47.5 5.4 36 11-46 3-38 (410)
468 1leh_A Leucine dehydrogenase; 85.4 0.69 2.4E-05 48.1 4.8 34 10-44 171-204 (364)
469 1s6y_A 6-phospho-beta-glucosid 85.4 2.3 8E-05 45.4 9.0 94 12-129 7-111 (450)
470 1y56_B Sarcosine oxidase; dehy 85.2 0.8 2.8E-05 46.6 5.2 36 12-48 5-40 (382)
471 2d0i_A Dehydrogenase; structur 85.2 0.63 2.1E-05 47.7 4.3 35 9-44 143-177 (333)
472 3gvx_A Glycerate dehydrogenase 85.2 0.74 2.5E-05 46.3 4.7 36 9-45 119-154 (290)
473 4dpk_A Malonyl-COA/succinyl-CO 85.2 1.5 5E-05 45.5 7.1 96 12-136 7-111 (359)
474 4dpl_A Malonyl-COA/succinyl-CO 85.2 1.5 5E-05 45.5 7.1 96 12-136 7-111 (359)
475 3cky_A 2-hydroxymethyl glutara 85.2 0.69 2.4E-05 45.8 4.5 32 12-44 4-35 (301)
476 3hsk_A Aspartate-semialdehyde 85.1 0.98 3.4E-05 47.2 5.8 99 10-136 17-125 (381)
477 2nm0_A Probable 3-oxacyl-(acyl 85.1 1.2 4.2E-05 43.2 6.2 37 8-45 17-54 (253)
478 3d1c_A Flavin-containing putat 85.1 0.56 1.9E-05 47.4 3.9 35 12-46 4-38 (369)
479 3evt_A Phosphoglycerate dehydr 85.0 0.81 2.8E-05 46.8 5.0 36 9-45 134-169 (324)
480 2rh8_A Anthocyanidin reductase 84.9 3.1 0.00011 41.4 9.4 78 12-110 9-87 (338)
481 2ekl_A D-3-phosphoglycerate de 84.9 0.76 2.6E-05 46.6 4.8 34 9-43 139-172 (313)
482 2dbq_A Glyoxylate reductase; D 84.9 0.75 2.6E-05 47.1 4.7 35 9-44 147-181 (334)
483 1x13_A NAD(P) transhydrogenase 84.9 0.72 2.5E-05 48.5 4.7 36 10-46 170-205 (401)
484 2uyy_A N-PAC protein; long-cha 84.9 0.8 2.7E-05 45.9 4.9 32 13-45 31-62 (316)
485 2gcg_A Glyoxylate reductase/hy 84.8 0.68 2.3E-05 47.3 4.4 35 9-44 152-186 (330)
486 1txg_A Glycerol-3-phosphate de 84.7 0.79 2.7E-05 46.0 4.8 31 13-44 1-31 (335)
487 3hwr_A 2-dehydropantoate 2-red 84.7 0.88 3E-05 46.0 5.1 31 11-42 18-48 (318)
488 3e9m_A Oxidoreductase, GFO/IDH 84.6 1.1 3.8E-05 45.4 5.8 24 11-34 4-27 (330)
489 2yut_A Putative short-chain ox 84.5 1.2 4E-05 41.1 5.6 29 13-44 1-30 (207)
490 1j4a_A D-LDH, D-lactate dehydr 84.5 0.86 2.9E-05 46.7 5.0 35 9-44 143-177 (333)
491 3evn_A Oxidoreductase, GFO/IDH 84.5 1.5 5.2E-05 44.2 6.8 36 11-46 4-40 (329)
492 2uzz_A N-methyl-L-tryptophan o 84.4 0.6 2.1E-05 47.3 3.8 36 12-48 2-37 (372)
493 3lk7_A UDP-N-acetylmuramoylala 84.4 2.1 7.1E-05 45.5 8.1 36 10-46 7-42 (451)
494 4a26_A Putative C-1-tetrahydro 84.4 1.2 4.1E-05 45.1 5.8 34 10-44 163-197 (300)
495 1ryi_A Glycine oxidase; flavop 84.3 0.84 2.9E-05 46.4 4.8 36 12-48 17-52 (382)
496 3pp8_A Glyoxylate/hydroxypyruv 84.3 0.82 2.8E-05 46.5 4.6 36 9-45 136-171 (315)
497 2gf2_A Hibadh, 3-hydroxyisobut 84.3 0.77 2.6E-05 45.4 4.4 31 13-44 1-31 (296)
498 2o7s_A DHQ-SDH PR, bifunctiona 84.1 0.71 2.4E-05 50.2 4.4 35 9-44 361-395 (523)
499 2ejw_A HDH, homoserine dehydro 84.1 2.3 7.9E-05 43.5 8.0 86 12-134 3-97 (332)
500 2gf3_A MSOX, monomeric sarcosi 84.1 0.82 2.8E-05 46.5 4.6 36 12-48 3-38 (389)
No 1
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=1.2e-109 Score=923.00 Aligned_cols=504 Identities=39% Similarity=0.678 Sum_probs=432.5
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+|+++|++|+++||+||||||+||+++++|+++|||+|+|+|+|+|+.|||+|||||+.+|||++||++++++++++||+
T Consensus 7 ~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~ 86 (640)
T 1y8q_B 7 LPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPK 86 (640)
T ss_dssp CCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTT
T ss_pred cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCCCccccccCCCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 161 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~t~Cy~C~~~~~ 161 (563)
++|+++..++++..++.++++++|+||+|+||.++|.++|++|+.+++|+|++|+.|+.|++++++|+.++||+|.+.|+
T Consensus 87 v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~Cy~C~~~p~ 166 (640)
T 1y8q_B 87 ANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPT 166 (640)
T ss_dssp CEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSCCTTSSCCCC
T ss_pred CeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCCCcccCCCCC
Confidence 99999999998776778999999999999999999999999999999999999999999999999999999999999898
Q ss_pred CCCCCceeeccCCCCchhHHHHHHHHHHHHHhCCCCcccccccCCccc-----c-----------chhhhhhhhhcCCch
Q 008516 162 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDA-----S-----------SSAHAEDVFVRRKDE 225 (563)
Q Consensus 162 ~~~~p~cti~~~p~~~~hci~~a~~~lf~~lf~~~~~~~~~~~~~~~~-----~-----------~~~~~~~~~~~~~~~ 225 (563)
++++|+||++++|+.++|||+||++ +|+.+|++....+++.....+. . .++.+... ..+.|.
T Consensus 167 ~~~~p~Cti~~~p~~~~hci~~a~~-~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 244 (640)
T 1y8q_B 167 QRTFPGATIRNTPSEPIHCIVWAKY-LFNQLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGDIKRI-STKEWA 244 (640)
T ss_dssp CCCCCTTTTTSCCCSHHHHHHHHHH-HHHHHHSCCCGGGCCSCCTTCTTSCCC----------------------CHHHH
T ss_pred CcccceeeecCCCCchHHHHHHHHH-HHHHHhCCcchhhhhcccccchhhhhhhhhhhhhhhhhhhhhHHHHH-hhhhHH
Confidence 9999999999999999999999998 8999999765433332111000 0 00111111 122466
Q ss_pred hHHHHHH-HHhhhhhhccHHHHhcCCcccCCCCCCCccccCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCc
Q 008516 226 DIDQYGR-RIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDT 304 (563)
Q Consensus 226 ~~~~~a~-~~f~~~F~~~I~~ll~~~~~W~~~~~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (563)
+|+.||+ .+|+++|+++|++||++++||++||+|+||.|+...+.+.... ..+......+++++ +++
T Consensus 245 ~~~~~a~~~~f~k~F~~~I~~Ll~~~~fW~~kr~P~pl~fd~~~~~~~~~~-----------~~~~~~~~~~~~~d-~~~ 312 (640)
T 1y8q_B 245 KSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQSQGEETN-----------ASDQQNEPQLGLKD-QQV 312 (640)
T ss_dssp HHTTSCHHHHHHHHHTHHHHHHTTCGGGCSSSCCCCCCCHHHHHHC-------------------------CCCGG-GSC
T ss_pred HhHhHHHHHHHHHHHhhHHHHHHhCcccccCCCCCCCcccCcccccccccc-----------ccccccccccCCCh-hhh
Confidence 7777776 4999999999999999999999999999999984332211100 00111122345544 779
Q ss_pred cccccchHHHHHHHHHHHHhhhh--ccCCcccCCCcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhHHH
Q 008516 305 WTLLESSRIFLEALKLFFAKREK--EIGNLSFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNA 382 (563)
Q Consensus 305 ~s~~e~~~~f~~~~~~l~~~~~~--~~~~l~FdKDDd~h~dFV~AasNLRA~~f~I~~~s~~~~K~iAGnIIPAIATTnA 382 (563)
|+++++.++|.++++++.++... .+.|++||||||+|||||+|||||||+||+||++|+|++|+||||||||||||||
T Consensus 313 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~FdKDDd~h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnA 392 (640)
T 1y8q_B 313 LDVKSYARLFSKSIETLRVHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNA 392 (640)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCTTCCCCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHH
T ss_pred cChhhhhhhHHHHHHHHHHHhhhcccCCCcccCCCCHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHH
Confidence 99999999999999998876432 4789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCccccceeeeccc-ccccccccccCCCCCCCCcccCC-CccEEEEEcCCCCCHHHHHHHHHHHh
Q 008516 383 IIAGLIVIEAIKVLLKDTDKYRMTYCLEH-ITKKMLLMPVEPYEPNKSCYVCS-ETPLSLEINTSRSKLRDFVEKIVKAK 460 (563)
Q Consensus 383 iVAGl~vlE~~K~l~~~~~~~r~~f~~~~-~~~~~~~~p~~~~~pn~~C~vC~-~~~~~l~i~~~~~TL~~li~~~lk~~ 460 (563)
|||||+|+|+||+++++.+.|||+|+|++ +.+++++.+..|.+|||+|++|+ .++++++++.+++||++|++++++++
T Consensus 393 iVaGl~~lE~~Kvl~~~~~~~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~~~TL~~li~~~~~~~ 472 (640)
T 1y8q_B 393 VIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEK 472 (640)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTTTCBHHHHHHCCCCCC
T ss_pred HHHHHHHHHHHHHHhccHHhhhhhheeeccCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999998 55678899999999999999994 66789999988999999999977999
Q ss_pred cCCCcCeEEe---cCeEEEeeCCCchHHHHHHhhhhhhcchhhhcCcccCCCcceeeccCCCccceeeEEe
Q 008516 461 LGINFPLIMH---GSNLLYEVGDDLDEVEVANYAANLEKVKIQASSVTLCSSPPDFCCSCNDADVLLFCFF 528 (563)
Q Consensus 461 ~~l~~~~i~~---g~~~LY~~~~~~~~~~~~~~~~nl~k~L~el~~gv~~g~~~~~~~~~~~~d~~~~~~~ 528 (563)
|||++|||++ |+++||..+++ .+++||+|+|++| |+++|+++.+.+.-.++++-+.+..
T Consensus 473 ~~l~~~~is~~~~~~~~ly~~~~~-------~~~~~l~~~l~el--~v~~~~~~~v~d~~~~~~~~i~~~~ 534 (640)
T 1y8q_B 473 FAMVAPDVQIEDGKGTILISSEEG-------ETEANNHKKLSEF--GIRNGSRLQADDFLQDYTLLINILH 534 (640)
T ss_dssp TCCSSCEEEESSSSCCEEECSSSS-------SSTTGGGSBGGGG--TCCTTCEEEEEETTTTEEEEEEEEE
T ss_pred hCCCCceEEEEcCCCcEEEeccch-------hhHHhhhCcHHHh--CccCCcEEEecCCCccEEEEEEEEe
Confidence 9999999999 88999987754 3578999999999 8999999999886666666555543
No 2
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-100 Score=889.30 Aligned_cols=515 Identities=27% Similarity=0.398 Sum_probs=402.5
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCC-----CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHH
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGF-----QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVL 76 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gv-----g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~ 76 (563)
+|.++|++|+++||+||||||+|||++|+|+++|| |+|+|+|+|+|+.|||||||||+.+|||++||++|+++++
T Consensus 415 ~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~ 494 (1015)
T 3cmm_A 415 FGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVC 494 (1015)
T ss_dssp HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred cCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHH
Confidence 47899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhCCCc--eEEEeccCCCCC---cchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCCC
Q 008516 77 KFRPQM--SITAHHANVKDP---KFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKT 151 (563)
Q Consensus 77 ~~np~v--~I~~~~~~i~~~---~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~t 151 (563)
++||++ +|+++..+++.. .++.+|++++|+||+|+||.++|.++|++|+.+++|+|++|+.|+.|++++++|+.+
T Consensus 495 ~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G~v~v~~p~~t 574 (1015)
T 3cmm_A 495 AMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQVIIPRLT 574 (1015)
T ss_dssp HHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTB
T ss_pred HHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCccccceEEEeCCCC
Confidence 999999 999999998642 356789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCceeeccCCCCchhHHHHHHHHHHHHHhCCCCccc-cc-c-cC--------Cc-cccchhhhhhhh
Q 008516 152 ECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQEN-DL-N-VR--------SS-DASSSAHAEDVF 219 (563)
Q Consensus 152 ~Cy~C~~~~~~~~~p~cti~~~p~~~~hci~~a~~~lf~~lf~~~~~~~-~~-~-~~--------~~-~~~~~~~~~~~~ 219 (563)
+||+|.++|+++++|+||++++|+.++|||+||++ +|+.+|++..++. .+ . +. .. ....++.+.+.+
T Consensus 575 ~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~-~f~~lf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~l 653 (1015)
T 3cmm_A 575 ESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKS-LFQGYFTDSAENVNMYLTQPNFVEQTLKQSGDVKGVLESISDSL 653 (1015)
T ss_dssp CCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHH-HHHHHHTHHHHHHHHHHHCTTHHHHHHC---CCHHHHHHHHHHH
T ss_pred CccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHH-HHHHHHhhhhhhhhhhccCchhHHHHHhccchhHHHHHHHHHHh
Confidence 99999998889999999999999999999999999 8999999643321 11 1 10 00 001122333333
Q ss_pred --hcCCchhHHHHHHHHhhhhhhccHHHHhcC----------CcccCC-CCCCCccccCCCCCcc--hhhhcccccccc-
Q 008516 220 --VRRKDEDIDQYGRRIYDHVFGYNIEVASSN----------EETWKN-RNRPKPIYSADVMPEN--LTEQNGNVAKNC- 283 (563)
Q Consensus 220 --~~~~~~~~~~~a~~~f~~~F~~~I~~ll~~----------~~~W~~-~~~P~pl~~~~~~~~~--~~~~~~~~~~~~- 283 (563)
.+.++++|++||+.+|+++|+++|++||++ ++||++ ||+|+||.||...+.+ +....+++.+..
T Consensus 654 ~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~ 733 (1015)
T 3cmm_A 654 SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHFVVAGASLRAYNY 733 (1015)
T ss_dssp HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCCCCHHHHHHHHHHHHhHHHhc
Confidence 245789999999999999999999999987 899996 9999999999655433 222222221110
Q ss_pred --cc-----cchhhhHHhhc---CC-----CCCCCcccccc-----chHH-HHHHHHHHHHhhh-------hccCCcccC
Q 008516 284 --VV-----DTSSVSAMASL---GL-----KNPQDTWTLLE-----SSRI-FLEALKLFFAKRE-------KEIGNLSFD 335 (563)
Q Consensus 284 --~~-----~~~~~~~~~~~---~~-----~~~~~~~s~~e-----~~~~-f~~~~~~l~~~~~-------~~~~~l~Fd 335 (563)
.. ..+.....+.+ .+ +..-+++..+. .... +.++++++..+.. ..+.|++||
T Consensus 734 ~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~Fe 813 (1015)
T 3cmm_A 734 GIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPDPSTLAGFKLEPVDFE 813 (1015)
T ss_dssp TCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHHTTSCCGGGGTTCCCCCCCCC
T ss_pred CCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHHHHhccchhcccCCCCceeee
Confidence 00 00000000000 00 00001110000 0111 4445566654422 136799999
Q ss_pred CCcHh--HHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHHhc--Cccccceeeeccc
Q 008516 336 KDDQL--AVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLK--DTDKYRMTYCLEH 411 (563)
Q Consensus 336 KDDd~--h~dFV~AasNLRA~~f~I~~~s~~~~K~iAGnIIPAIATTnAiVAGl~vlE~~K~l~~--~~~~~r~~f~~~~ 411 (563)
||||+ |||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|+||+++| +.+.|||+|+|++
T Consensus 814 KDDd~n~h~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE~~K~~~~~~~~~~~kn~f~nla 893 (1015)
T 3cmm_A 814 KDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLA 893 (1015)
T ss_dssp TTCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHTTCCCGGGCCEEEEETT
T ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHHHHHHHhcccchhhhhhHHHhcc
Confidence 99999 9999999999999999999999999999999999999999999999999999999998 5799999999998
Q ss_pred ccccccccccCC-CCCCCCcccCCC--ccEEEEEcCCCCCHHHHHHHHHHHhcCCCcCeEEecCeEEEeeCCCchHHHHH
Q 008516 412 ITKKMLLMPVEP-YEPNKSCYVCSE--TPLSLEINTSRSKLRDFVEKIVKAKLGINFPLIMHGSNLLYEVGDDLDEVEVA 488 (563)
Q Consensus 412 ~~~~~~~~p~~~-~~pn~~C~vC~~--~~~~l~i~~~~~TL~~li~~~lk~~~~l~~~~i~~g~~~LY~~~~~~~~~~~~ 488 (563)
++. +.+.+| .+|+++|+.|++ .+.+++++. ++||++|+++ ++++||++++||+.|+++||+++++..
T Consensus 894 ~~~---~~~~~p~~~~~~~~~~~~~~t~wd~~~v~~-~~Tl~~li~~-~~~~~~~~~~~i~~~~~~ly~~~~~~~----- 963 (1015)
T 3cmm_A 894 LPF---FGFSEPIASPKGEYNNKKYDKIWDRFDIKG-DIKLSDLIEH-FEKDEGLEITMLSYGVSLLYASFFPPK----- 963 (1015)
T ss_dssp TTE---EEEECCCBCCEEEETTEEEETTTCEEEEES-CCBHHHHHHH-HHHTTCCEEEEEEETTEEEEETTCCHH-----
T ss_pred CCc---eeecCCCCCCCCCCCCCCCCeEEEEEEECC-CCcHHHHHHH-HHHHhCCcceeeccCCcEEEecCCCch-----
Confidence 553 333333 356677776653 233566664 8999999999 589999999999999999999987522
Q ss_pred HhhhhhhcchhhhcCcccCCCc--------ceeeccC---CCccceeeEE
Q 008516 489 NYAANLEKVKIQASSVTLCSSP--------PDFCCSC---NDADVLLFCF 527 (563)
Q Consensus 489 ~~~~nl~k~L~el~~gv~~g~~--------~~~~~~~---~~~d~~~~~~ 527 (563)
..++||+|+|++|...+....+ ++++|.. +|+|+|+...
T Consensus 964 ~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~d~~~p~v~~ 1013 (1015)
T 3cmm_A 964 KLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITI 1013 (1015)
T ss_dssp HHHHHTTSBHHHHHHHHSSSCCCSSCCEEEEEEEEECTTSCEECCCEEEE
T ss_pred hhHHhccCCHHHHHHhhccCcCCCCceEEEEEEEecCCCCCcCCCCcEEE
Confidence 3578999999999754444433 4566654 4677887653
No 3
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=3.1e-68 Score=572.25 Aligned_cols=375 Identities=31% Similarity=0.516 Sum_probs=306.3
Q ss_pred HHHH-HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCc
Q 008516 4 ERQL-EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQM 82 (563)
Q Consensus 4 ~~~q-~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v 82 (563)
.+.+ .+|+++||+|||+||+||+++++|+++|||+|+|+|+|+|+.|||+|||||+.+|||++||++++++++++||++
T Consensus 31 ~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v 110 (434)
T 1tt5_B 31 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNC 110 (434)
T ss_dssp SSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCC
Confidence 3444 456999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhc------------CCCEEEeccccceeeEEEEeCCC
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA------------DVPLVESGTTGFLGQVTVHVKGK 150 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~------------~~pli~~gt~G~~G~v~v~~~~~ 150 (563)
+|+++..++++. +.++++++|+||+|+||.++|.++|+.|+.. ++|+|++|+.|+.|++.++.|+.
T Consensus 111 ~v~~~~~~i~~~--~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~ 188 (434)
T 1tt5_B 111 NVVPHFNKIQDF--NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM 188 (434)
T ss_dssp CCEEEESCGGGB--CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEEEECTTT
T ss_pred EEEEEecccchh--hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEEEECCCC
Confidence 999999988653 4689999999999999999999999999884 99999999999999999999999
Q ss_pred CccccccCC--CCCCCCCceeeccCCCCchhHHHHHHHHHHHHHhCCCCcccccccCCccccchhhhhhhhhcCCchhHH
Q 008516 151 TECYECQPK--PAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHAEDVFVRRKDEDID 228 (563)
Q Consensus 151 t~Cy~C~~~--~~~~~~p~cti~~~p~~~~hci~~a~~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (563)
++||+|..+ |++.++|.||++++|+.++|||+||+.++|+..+
T Consensus 189 t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i~~~~~~----------------------------------- 233 (434)
T 1tt5_B 189 TACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQ----------------------------------- 233 (434)
T ss_dssp SCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHSC-----------------------------------
T ss_pred CCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHHHHhhhc-----------------------------------
Confidence 999999854 5678999999999999999999999985443210
Q ss_pred HHHHHHhhhhhhccHHHHhcCCcccCCCCCCCccccCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCccccc
Q 008516 229 QYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWTLL 308 (563)
Q Consensus 229 ~~a~~~f~~~F~~~I~~ll~~~~~W~~~~~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 308 (563)
|.
T Consensus 234 ------------------------------~~------------------------------------------------ 235 (434)
T 1tt5_B 234 ------------------------------PF------------------------------------------------ 235 (434)
T ss_dssp ------------------------------TT------------------------------------------------
T ss_pred ------------------------------cc------------------------------------------------
Confidence 00
Q ss_pred cchHHHHHHHHHHHHhhhhccCCcccCCCcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhHHHHHHHHH
Q 008516 309 ESSRIFLEALKLFFAKREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLI 388 (563)
Q Consensus 309 e~~~~f~~~~~~l~~~~~~~~~~l~FdKDDd~h~dFV~AasNLRA~~f~I~~~s~~~~K~iAGnIIPAIATTnAiVAGl~ 388 (563)
.+++.||+||++|++||+++||+||..|||+..+++.+++++|+||||||||||||||++
T Consensus 236 --------------------~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~ 295 (434)
T 1tt5_B 236 --------------------GEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVC 295 (434)
T ss_dssp --------------------CTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred --------------------ccccccCCCcHHHHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHH
Confidence 012369999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccceeeecccccccccccccCCCCCCCCcccCCCccEEEEEcCCCCCHHHHHHHHHHH-hcCCCcCe
Q 008516 389 VIEAIKVLLKDTDKYRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVKA-KLGINFPL 467 (563)
Q Consensus 389 vlE~~K~l~~~~~~~r~~f~~~~~~~~~~~~p~~~~~pn~~C~vC~~~~~~l~i~~~~~TL~~li~~~lk~-~~~l~~~~ 467 (563)
++|++|+|.|..+...+.++.-... ..+. .....+++|+|++|+..+..++++. ++||++|++.+.++ +++++.|+
T Consensus 296 a~EaiK~l~g~~~~l~~~l~~d~~~-~~~~-~~~~~~~~~~C~vC~~~~~~~~~~~-~~tl~~~~~~l~~~~~~~~~~~~ 372 (434)
T 1tt5_B 296 ATEVFKIATSAYIPLNNYLVFNDVD-GLYT-YTFEAERKENCPACSQLPQNIQFSP-SAKLQEVLDYLTNSASLQMKSPA 372 (434)
T ss_dssp HHHHHHHHHTCSCCCCSEEEEECSB-SCEE-EEECCCCCTTCTTTCSSCBCCCC------CTTHHHHHHHCSSCCCSSCC
T ss_pred HHHHHHHHhCCCcccCceEEEEcCC-Ccee-EEEeccCCCCCCccCCCCceEEECC-CccHHHHHHHHhccCccceEccE
Confidence 9999999998754333322211111 1111 1123458999999997666666664 57999999996443 57899999
Q ss_pred EEe----cCeEEEeeCCCchHHHHHHhhhhhhcchhhhcCcccCCCcceeeccCCCcc
Q 008516 468 IMH----GSNLLYEVGDDLDEVEVANYAANLEKVKIQASSVTLCSSPPDFCCSCNDAD 521 (563)
Q Consensus 468 i~~----g~~~LY~~~~~~~~~~~~~~~~nl~k~L~el~~gv~~g~~~~~~~~~~~~d 521 (563)
|+. |+++||+.+.+ +.++.+++||+|+|+|| |+.+|+++.+++.....+
T Consensus 373 is~~~~~~~~~ly~~~~~---~~~~~~~~~l~~~l~~l--~~~~g~~~~v~d~~~~~~ 425 (434)
T 1tt5_B 373 ITATLEGKNRTLYLQSVT---SIEERTRPNLSKTLKEL--GLVDGQELAVADVTTPQT 425 (434)
T ss_dssp CEET----TEECCCCCCT---TTTTTSCC-CCC-------CCCSSCCEECCCTTCSSC
T ss_pred EEEEccCCCcEEEecCCc---chhhhhHhhhcCCHHHc--CCCCCCEEEEECCCCccc
Confidence 988 58999987642 22235789999999999 899999999887554444
No 4
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=1.5e-63 Score=576.07 Aligned_cols=378 Identities=32% Similarity=0.520 Sum_probs=325.2
Q ss_pred CCHHHHHHH-cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC
Q 008516 2 VSERQLEAI-KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP 80 (563)
Q Consensus 2 ~~~~~q~kL-~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np 80 (563)
++++.|+++ +++||+|||+||+||+++++|+++|||+|+|+|+|+|+.|||+|||||+.+|||++||++++++++++||
T Consensus 400 ~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np 479 (805)
T 2nvu_B 400 PSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP 479 (805)
T ss_dssp CCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC
Confidence 577888887 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhc------------CCCEEEeccccceeeEEEEeC
Q 008516 81 QMSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA------------DVPLVESGTTGFLGQVTVHVK 148 (563)
Q Consensus 81 ~v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~------------~~pli~~gt~G~~G~v~v~~~ 148 (563)
+++|+++..++++. +.++++++|+||+|+||.++|+++|+.|+.. ++|+|++|+.|+.|++.+++|
T Consensus 480 ~~~v~~~~~~~~~~--~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~~~~p 557 (805)
T 2nvu_B 480 NCNVVPHFNKIQDF--NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILP 557 (805)
T ss_dssp TCEEEEEESCGGGS--CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEEEECT
T ss_pred CCEEEEEecccccc--HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEEEECC
Confidence 99999999998653 4689999999999999999999999999884 999999999999999999999
Q ss_pred CCCccccccCC--CCCCCCCceeeccCCCCchhHHHHHHHHHHHHHhCCCCcccccccCCccccchhhhhhhhhcCCchh
Q 008516 149 GKTECYECQPK--PAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHAEDVFVRRKDED 226 (563)
Q Consensus 149 ~~t~Cy~C~~~--~~~~~~p~cti~~~p~~~~hci~~a~~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (563)
+.++||+|..+ |++..+|.|+++++|+.++|||.||+.++|+..+
T Consensus 558 ~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~~~~~~~--------------------------------- 604 (805)
T 2nvu_B 558 GMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQ--------------------------------- 604 (805)
T ss_dssp TTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHHC---------------------------------
T ss_pred CCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHhhccccc---------------------------------
Confidence 99999999854 6678899999999999999999999985543211
Q ss_pred HHHHHHHHhhhhhhccHHHHhcCCcccCCCCCCCccccCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCccc
Q 008516 227 IDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWT 306 (563)
Q Consensus 227 ~~~~a~~~f~~~F~~~I~~ll~~~~~W~~~~~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 306 (563)
|.
T Consensus 605 --------------------------------~~---------------------------------------------- 606 (805)
T 2nvu_B 605 --------------------------------PF---------------------------------------------- 606 (805)
T ss_dssp --------------------------------TT----------------------------------------------
T ss_pred --------------------------------CC----------------------------------------------
Confidence 00
Q ss_pred cccchHHHHHHHHHHHHhhhhccCCcccCCCcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhHHHHHHH
Q 008516 307 LLESSRIFLEALKLFFAKREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAG 386 (563)
Q Consensus 307 ~~e~~~~f~~~~~~l~~~~~~~~~~l~FdKDDd~h~dFV~AasNLRA~~f~I~~~s~~~~K~iAGnIIPAIATTnAiVAG 386 (563)
.+++.||+||++|++||++.+|+||..|||+..+++.+++++|+||||||||||||+|
T Consensus 607 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~ 664 (805)
T 2nvu_B 607 ----------------------GEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAA 664 (805)
T ss_dssp ----------------------STTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHH
T ss_pred ----------------------CCcccCCCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHH
Confidence 0234799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccceeeecccccccccccccCCCCCCCCcccCCCccEEEEEcCCCCCHHHHHHHHHHH-hcCCCc
Q 008516 387 LIVIEAIKVLLKDTDKYRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVKA-KLGINF 465 (563)
Q Consensus 387 l~vlE~~K~l~~~~~~~r~~f~~~~~~~~~~~~p~~~~~pn~~C~vC~~~~~~l~i~~~~~TL~~li~~~lk~-~~~l~~ 465 (563)
++++|++|+|.|..+..++.++.-... ..+ ......+++|+|++|+..+..++++. ++||++|++.+.++ +++++.
T Consensus 665 ~~a~e~ik~l~~~~~~l~~~~~~~~~~-~~~-~~~~~~~~~~~C~~C~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 741 (805)
T 2nvu_B 665 VCATEVFKIATSAYIPLNNYLVFNDVD-GLY-TYTFEAERKENCPACSQLPQNIQFSP-SAKLQEVLDYLTNSASLQMKS 741 (805)
T ss_dssp HHHHHHHHHHHCSSCCCCSEEEEECSB-SCE-EEEECCCCCTTCTTTSCCCEEEEECT-TSBHHHHHHHHHHCTTTCCSS
T ss_pred HHHHHHHHHHhccccccCceEEecCCC-Ccc-cccccCCCCCCCCeeCceeEEEEECC-cChHHHHHHHHHhhhccCccc
Confidence 999999999998765444422211111 111 11123457999999998778888885 58999999996544 678999
Q ss_pred CeEEe----cCeEEEeeCCCchHHHHHHhhhhhhcchhhhcCcccCCCcceeeccCCCccc
Q 008516 466 PLIMH----GSNLLYEVGDDLDEVEVANYAANLEKVKIQASSVTLCSSPPDFCCSCNDADV 522 (563)
Q Consensus 466 ~~i~~----g~~~LY~~~~~~~~~~~~~~~~nl~k~L~el~~gv~~g~~~~~~~~~~~~d~ 522 (563)
|+|+. |+++||+.+. ++.++.+++||+|+|+|| |+++|+++.+++.....++
T Consensus 742 ~~~~~~~~~~~~~ly~~~~---~~~~~~~~~~l~~~l~~l--~~~~~~~~~~~~~~~~~~~ 797 (805)
T 2nvu_B 742 PAITATLEGKNRTLYLQSV---TSIEERTRPNLSKTLKEL--GLVDGQELAVADVTTPQTV 797 (805)
T ss_dssp CEEEEEETTEEEEEECCSS---HHHHHHHGGGGGSBTTTT--TCCTTCEEEEECTTSSSCE
T ss_pred ceEEEEccCCCcEEEecCc---cchhhhhHhhhcCCHHHc--CCCCCCEEEEEcCCCCeeE
Confidence 99988 5889998774 344556889999999999 9999999999876655443
No 5
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=3e-44 Score=363.00 Aligned_cols=214 Identities=20% Similarity=0.289 Sum_probs=137.6
Q ss_pred CCCCCCCceeeccCCCCchhHHHHHHHHHHHHHhCCCCccc-ccccCC---------cc-c--cchhhhhhhh---hcCC
Q 008516 160 PAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQEN-DLNVRS---------SD-A--SSSAHAEDVF---VRRK 223 (563)
Q Consensus 160 ~~~~~~p~cti~~~p~~~~hci~~a~~~lf~~lf~~~~~~~-~~~~~~---------~~-~--~~~~~~~~~~---~~~~ 223 (563)
+-+++||+|||||+|+.++|||+|||+ +|+.+|+...++. .+...+ .. . ..++.+.+.+ .+.+
T Consensus 9 ~~~ks~P~CTlrsfP~~i~HcI~WAr~-lFe~lF~~~~~~~n~~l~dp~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~ 87 (276)
T 1z7l_A 9 EFEKSIPICTLKNFPNAIEHTLQWARD-EFEGLFKQPAENVNQYLTDSKFVERTLRLAGTQPLEVLEAVQRSLVLQRPQT 87 (276)
T ss_dssp -----CCHHHHHTCCCSHHHHHHHHHH-HHHHHHTHHHHHHHHHTTCSHHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSS
T ss_pred cCCCCCceeccCCCCCChhHHHHHHHH-HHHHHHcCCHHHHHHhhcChHHHHHHHhccchhhHHHHHHHHHHHhhcCCCc
Confidence 457899999999999999999999999 8999999654321 111100 00 0 0123333333 3457
Q ss_pred chhHHHHHHHHhhhhhhccHHHHhcC----------CcccCC-CCCCCccccCCCCCc--chhhhcccccccc---cccc
Q 008516 224 DEDIDQYGRRIYDHVFGYNIEVASSN----------EETWKN-RNRPKPIYSADVMPE--NLTEQNGNVAKNC---VVDT 287 (563)
Q Consensus 224 ~~~~~~~a~~~f~~~F~~~I~~ll~~----------~~~W~~-~~~P~pl~~~~~~~~--~~~~~~~~~~~~~---~~~~ 287 (563)
+++|++||+.+|+++|+++|++||.+ ++||++ ||+|+||.|+...+. .++...++|.+.. ....
T Consensus 88 ~~~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~~ 167 (276)
T 1z7l_A 88 WGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQ 167 (276)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88999999999999999999999988 899996 999999999965443 3333333332211 1100
Q ss_pred hhhhH---HhhcCC-----CCCCCcccccc-----chHHHHHHHHHHHHhhh-------hccCCcccCCCcHh--HHHHH
Q 008516 288 SSVSA---MASLGL-----KNPQDTWTLLE-----SSRIFLEALKLFFAKRE-------KEIGNLSFDKDDQL--AVEFV 345 (563)
Q Consensus 288 ~~~~~---~~~~~~-----~~~~~~~s~~e-----~~~~f~~~~~~l~~~~~-------~~~~~l~FdKDDd~--h~dFV 345 (563)
+.... .....+ +...+++..+. ...++.++++++..+.. ..+.|++||||||+ |||||
T Consensus 168 d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~pl~FeKDDd~N~hmdFI 247 (276)
T 1z7l_A 168 DRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFI 247 (276)
T ss_dssp CHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------CCSHHHHHHHHHSCCGGGSTTCCCCCCCCCSSCTTSSHHHHH
T ss_pred CHHHHHHHHhcCCCCCcCCccccccccchhhhchhcccccHHHHHHHHHHhhhhhhcccccCCCcceecCCCcccHHHHH
Confidence 11110 111111 01011221110 01123345666655432 23779999999999 99999
Q ss_pred HHHHHHHHHHcCCCCCCHHHHHhhhcccc
Q 008516 346 TAAANIRAASFGISLHSLFEAKGIAGNIV 374 (563)
Q Consensus 346 ~AasNLRA~~f~I~~~s~~~~K~iAGnII 374 (563)
+|||||||+||+||++|||++|+||||||
T Consensus 248 tAaSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 248 VAASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred HHHHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 99999999999999999999999999998
No 6
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=2.2e-38 Score=332.17 Aligned_cols=155 Identities=21% Similarity=0.424 Sum_probs=147.4
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+++++|++|++++|+|||+||+||+++|+|+++|||+|+|+|+|+|+.+||+|||||+.+|||++||++++++++++||.
T Consensus 26 ~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~ 105 (346)
T 1y8q_A 26 WGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPM 105 (346)
T ss_dssp HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTT
T ss_pred hCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCCCccccccCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPK 159 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~t~Cy~C~~~ 159 (563)
++|+++..++++ ...++++++|+||+|+||.++|.++|+.|+.+++|+|.+|+.|+.|++++.++ .++|+.|.++
T Consensus 106 v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~~d~~-~~~~~~~~~~ 180 (346)
T 1y8q_A 106 VDVKVDTEDIEK--KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLG-EHEFVEEKTK 180 (346)
T ss_dssp SEEEEECSCGGG--CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEEEECS-EEEEEEECC-
T ss_pred eEEEEEecccCc--chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEEEecC-CCCEEEcCCC
Confidence 999999988854 35789999999999999999999999999999999999999999999999986 7899999866
No 7
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=5.7e-35 Score=298.52 Aligned_cols=155 Identities=28% Similarity=0.551 Sum_probs=129.0
Q ss_pred CH-HHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 3 SE-RQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 3 ~~-~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+. ++|++|+++||+|||+||+||+++++|+++|||+|+|+|.|+|+.|||+||| |+.+|||++||++++++++++||+
T Consensus 26 G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~aa~~~L~~iNP~ 104 (292)
T 3h8v_A 26 GIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPD 104 (292)
T ss_dssp ------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHHHHHHHHHHCTT
T ss_pred ChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHHHHHHHHhhCCC
Confidence 44 7899999999999999999999999999999999999999999999999996 799999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhc-----------ccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecccc--ceeeEEEEeC
Q 008516 82 MSITAHHANVKDPKFNVEFF-----------KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTG--FLGQVTVHVK 148 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~-----------~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G--~~G~v~v~~~ 148 (563)
++|+++..++++....++|+ +++|+||+|+||.++|.++|+.|+.+++|+|++|+.| +.|++.++.|
T Consensus 105 v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~~~~~Gqv~~~~p 184 (292)
T 3h8v_A 105 VLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIP 184 (292)
T ss_dssp SEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECTTSSEEEEEEECT
T ss_pred cEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeecceeEEEEEEECC
Confidence 99999999986522223454 6899999999999999999999999999999999986 8999999999
Q ss_pred CCCccccccC
Q 008516 149 GKTECYECQP 158 (563)
Q Consensus 149 ~~t~Cy~C~~ 158 (563)
+.++||+|..
T Consensus 185 g~t~Cy~Cl~ 194 (292)
T 3h8v_A 185 GESACFACAP 194 (292)
T ss_dssp TTSCCTTSSS
T ss_pred CCCCCHhhcC
Confidence 9999999984
No 8
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=7.9e-35 Score=320.27 Aligned_cols=179 Identities=20% Similarity=0.319 Sum_probs=163.3
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+++++|++|++++|+|||+||+|||++|+|+++|||+|+|+|+|+|+.|||+|||||+.+|||++||++++++++++||+
T Consensus 22 ~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~ 101 (531)
T 1tt5_A 22 WGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD 101 (531)
T ss_dssp HHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTT
T ss_pred cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCC-cchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCCCccccccCCC
Q 008516 82 MSITAHHANVKDP-KFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKP 160 (563)
Q Consensus 82 v~I~~~~~~i~~~-~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~t~Cy~C~~~~ 160 (563)
++|+++...+++. ....+++++||+||+|+||.++|.++|+.|+.+++|+|++|+.|+.|++++++| .+.|+++.+
T Consensus 102 v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~~p-~~~~~d~~~-- 178 (531)
T 1tt5_A 102 VSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIK-EHPVIESHP-- 178 (531)
T ss_dssp SBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEECS-CEEESCCCC--
T ss_pred CeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEEcC-CceeccCCC--
Confidence 9999998877421 124578999999999999999999999999999999999999999999999999 566777643
Q ss_pred CCCCCCceeeccCCCCchhHHHH
Q 008516 161 APKTYPVCTITSTPSKFVHCIVW 183 (563)
Q Consensus 161 ~~~~~p~cti~~~p~~~~hci~~ 183 (563)
.+..+|.|++..+|..++||-..
T Consensus 179 ~~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 179 DNALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp SSCCCCCCSSSCCHHHHHHHHTC
T ss_pred CCCCCcccccCCCCCchhhhhcc
Confidence 35678999999999999998443
No 9
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=2.4e-33 Score=291.05 Aligned_cols=191 Identities=24% Similarity=0.382 Sum_probs=158.9
Q ss_pred CCCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC
Q 008516 1 MVSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP 80 (563)
Q Consensus 1 ~~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np 80 (563)
++|+.++++|+++||+|||+||+||+++++|+++|||+|+|+|.|+|+.|||+|||||+.+|+|++||++++++++++||
T Consensus 23 ll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP 102 (340)
T 3rui_A 23 ILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP 102 (340)
T ss_dssp TCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred hcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccCCCC--------------CcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEE
Q 008516 81 QMSITAHHANVKD--------------PKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVH 146 (563)
Q Consensus 81 ~v~I~~~~~~i~~--------------~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~ 146 (563)
+++|+++..++.. .....++++++|+|++|+||.++|.++|++|+.+++|+|+++ .|+.|++.+.
T Consensus 103 ~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l~v~ 181 (340)
T 3rui_A 103 LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMR 181 (340)
T ss_dssp TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEEEEE
T ss_pred CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEEEEe
Confidence 9999999876521 011256889999999999999999999999999999999986 8999999886
Q ss_pred e-------CCCCccccccCCCCCC-C------CCceeeccCCCCchhHHHHHHHHHHHHHhC
Q 008516 147 V-------KGKTECYECQPKPAPK-T------YPVCTITSTPSKFVHCIVWAKDLLFAKLFG 194 (563)
Q Consensus 147 ~-------~~~t~Cy~C~~~~~~~-~------~p~cti~~~p~~~~hci~~a~~~lf~~lf~ 194 (563)
. |+.++||+|.....|. + -+.|++.. |...+..-.-|.+ ....+.+
T Consensus 182 ~g~~~~~~~~~~~Cy~C~~~~~p~~~~~~~t~~~~c~v~~-p~vg~igs~qA~E-~lk~l~~ 241 (340)
T 3rui_A 182 HGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMSTVTR-PGVAMMASSLAVE-LMTSLLQ 241 (340)
T ss_dssp CCCCCSSCCCCBCCGGGGSSSCCCCCTTTCCCGGGGGCSC-HHHHHHHHHHHHH-HHHHHTS
T ss_pred ecccccCCCCCCCeeeeCCCCCCcccccccccCCCcceec-chHHHHHHHHHHH-HHHHHhC
Confidence 4 5689999999642221 1 25688432 3222333345666 4566655
No 10
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=9.3e-33 Score=277.29 Aligned_cols=157 Identities=27% Similarity=0.492 Sum_probs=147.8
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+++++|++|++++|+|+|+||+|++++++|+++|+|+|+|+|.|.|+.|||+||+||+.+|||++||++++++++++||+
T Consensus 18 ~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 18 IALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp THHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCC-CccccccCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGK-TECYECQPK 159 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~-t~Cy~C~~~ 159 (563)
++|+++...+++. ...++++++|+||+|+||.++|..+|+.|+..++|+|++++.|+.|++.++.|+. ++||.|...
T Consensus 98 ~~v~~~~~~~~~~-~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~~~p~~~~~c~~cl~~ 175 (251)
T 1zud_1 98 IQLTALQQRLTGE-ALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWP 175 (251)
T ss_dssp SEEEEECSCCCHH-HHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEEECTTCTTCCHHHHCC
T ss_pred CEEEEEeccCCHH-HHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEEEccCCCCCcEEEeCC
Confidence 9999998877543 2356789999999999999999999999999999999999999999999998887 799999854
No 11
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=1.4e-31 Score=281.26 Aligned_cols=156 Identities=32% Similarity=0.496 Sum_probs=145.0
Q ss_pred CHHH-HHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 3 SERQ-LEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 3 ~~~~-q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+.++ |++|++++|+|||+||+||+++++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++|+++++++++++||+
T Consensus 108 ~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 187 (353)
T 3h5n_A 108 NPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE 187 (353)
T ss_dssp CHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred ChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence 3455 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCCHH-HHHHHHHHHHhcCCCEEEeccccceeeEEEE-eCCCCccccccCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLD-ARRHVNRLCLAADVPLVESGTTGFLGQVTVH-VKGKTECYECQPK 159 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~-ar~~in~~c~~~~~pli~~gt~G~~G~v~v~-~~~~t~Cy~C~~~ 159 (563)
++|+++..++++.....+ ++++|+||+|+||.. +|.++|+.|+.+++|+|.+|+.|..|++.++ .|+.++||+|...
T Consensus 188 v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~~g~~g~~~~p~~~~C~~C~~~ 266 (353)
T 3h5n_A 188 ISVSEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKV 266 (353)
T ss_dssp SEEEEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETTEEEEEEEECTTTSCCTTTTC-
T ss_pred CeEEEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCCEEEEEEEEcCCCCCChhhcCC
Confidence 999999999876542334 899999999999999 9999999999999999999999999999776 5999999999853
No 12
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.97 E-value=7.4e-32 Score=296.68 Aligned_cols=191 Identities=24% Similarity=0.402 Sum_probs=158.0
Q ss_pred CCCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC
Q 008516 1 MVSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP 80 (563)
Q Consensus 1 ~~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np 80 (563)
++|+.++++|+++||+||||||+||+++++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++||++++++++++||
T Consensus 315 llp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP 394 (615)
T 4gsl_A 315 ILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP 394 (615)
T ss_dssp TCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred hcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC
Confidence 36788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccCCCC--------------CcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEE
Q 008516 81 QMSITAHHANVKD--------------PKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVH 146 (563)
Q Consensus 81 ~v~I~~~~~~i~~--------------~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~ 146 (563)
+++|+++..++.. .....++++++|+||+|+||.++|.++|++|+.+++|+|+++ .|+.|++.+.
T Consensus 395 ~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~Gql~v~ 473 (615)
T 4gsl_A 395 LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMR 473 (615)
T ss_dssp TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSSEEEEEE
T ss_pred CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccceeEEEEe
Confidence 9999999876521 011246789999999999999999999999999999999986 8999999876
Q ss_pred e-------CCCCccccccCCCCCC-C------CCceeeccCCCCchhHHHHHHHHHHHHHhC
Q 008516 147 V-------KGKTECYECQPKPAPK-T------YPVCTITSTPSKFVHCIVWAKDLLFAKLFG 194 (563)
Q Consensus 147 ~-------~~~t~Cy~C~~~~~~~-~------~p~cti~~~p~~~~hci~~a~~~lf~~lf~ 194 (563)
. ++.++||+|.....|. + -+.|++.. |...+....-|.+ ....+.+
T Consensus 474 ~g~~~~~~~~~~~CY~Cl~~~~P~~~~~~rtl~~~C~Vl~-P~vgiigs~qA~E-aLk~Ll~ 533 (615)
T 4gsl_A 474 HGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTR-PGVAMMASSLAVE-LMTSLLQ 533 (615)
T ss_dssp CCC------CCCCCTTTSCSSCTTSCTTTTTTTCTTCCCC-HHHHHHHHHHHHH-HHHHHHS
T ss_pred ecccccCCCCCCCceeeCCCCCCcccccccccccCcceec-chHHHHHHHHHHH-HHHHHhC
Confidence 4 4689999999642221 1 24688432 3222333445666 4566655
No 13
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=1.8e-31 Score=267.65 Aligned_cols=157 Identities=36% Similarity=0.614 Sum_probs=146.9
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+++++|++|++++|+|||+||+|++++++|+++|+|+|+|+|.|.|+.|||+||+||+.+|||++|+++++++++++||.
T Consensus 21 ~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 100 (249)
T 1jw9_B 21 FDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH 100 (249)
T ss_dssp THHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCC-CccccccCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGK-TECYECQPK 159 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~-t~Cy~C~~~ 159 (563)
++|+++..++++. ...++++++|+||+|+||.++|..+++.|+..++|+|++++.|+.|++.++.|+. ++||.|...
T Consensus 101 ~~v~~~~~~~~~~-~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~~~~p~~~~~c~~c~~~ 178 (249)
T 1jw9_B 101 IAITPVNALLDDA-ELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSR 178 (249)
T ss_dssp SEEEEECSCCCHH-HHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEEEECCCTTCCCTHHHHT
T ss_pred cEEEEEeccCCHh-HHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEEEEeCCCCCCceEEECC
Confidence 9999998877532 2246789999999999999999999999999999999999999999999998877 799999853
No 14
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.97 E-value=1.4e-31 Score=294.41 Aligned_cols=191 Identities=25% Similarity=0.397 Sum_probs=158.6
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+|+.+|++|+++||+||||||+||+++++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++||++++++++++||+
T Consensus 317 l~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~ 396 (598)
T 3vh1_A 317 LPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL 396 (598)
T ss_dssp CTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT
T ss_pred cchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCC--------------CcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEe
Q 008516 82 MSITAHHANVKD--------------PKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHV 147 (563)
Q Consensus 82 v~I~~~~~~i~~--------------~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~ 147 (563)
++|+++..++.. .....++++++|+||+|+||.++|..+|++|+.+++|+|++ +.|+.|++.+..
T Consensus 397 v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~plI~a-a~G~~Gqv~v~~ 475 (598)
T 3vh1_A 397 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA-ALGFDSYLVMRH 475 (598)
T ss_dssp CEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCEEEEE-EECSSEEEEEEE
T ss_pred cEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCCEEEE-EECCccEEEEEc
Confidence 999999877521 01124688999999999999999999999999999999996 689999998774
Q ss_pred C-------CCCccccccCCCCCC------C-CCceeeccCCCCchhHHHHHHHHHHHHHhCC
Q 008516 148 K-------GKTECYECQPKPAPK------T-YPVCTITSTPSKFVHCIVWAKDLLFAKLFGD 195 (563)
Q Consensus 148 ~-------~~t~Cy~C~~~~~~~------~-~p~cti~~~p~~~~hci~~a~~~lf~~lf~~ 195 (563)
+ +.++||+|.....|. + .+.|++.. |...+.....|.+ ....+.+.
T Consensus 476 g~~p~~~~~~~~Cy~Cl~~~~p~~~~~~~tld~~C~Vl~-p~vgvigslqA~E-alk~Llg~ 535 (598)
T 3vh1_A 476 GNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTR-PGVAMMASSLAVE-LMTSLLQT 535 (598)
T ss_dssp C--------CBCCTTTSCSSCSSSCTTTTTTTBSCCCSC-THHHHHHHHHHHH-HHHHHHSC
T ss_pred cCCCccCCCCCCceeecCccCCCccccccccCCCCCccC-cHHHHHHHHHHHH-HHHHHhCC
Confidence 2 367899998432221 1 35687532 3333444557777 57777764
No 15
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-30 Score=300.83 Aligned_cols=174 Identities=20% Similarity=0.424 Sum_probs=158.7
Q ss_pred CCHHHHHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 2 VSERQLEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 2 ~~~~~q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+++++|++|++++|+|||+||+||+++|+|+++|||+|+|+|.|+|+.+||+||||++.+|||++||++++++++++||.
T Consensus 17 ~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lNP~ 96 (1015)
T 3cmm_A 17 LGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAY 96 (1015)
T ss_dssp SCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSCTT
T ss_pred cCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccC-CHHHHHHHHHHHHhcCCCEEEeccccceeeEEEEeCCCCccccccC--
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLD-NLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQP-- 158 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alD-n~~ar~~in~~c~~~~~pli~~gt~G~~G~v~v~~~~~t~Cy~C~~-- 158 (563)
++|+++...++ .++++++|+||+|.| |.++|..+|++|+.+++|+|.+++.|+.|++++.. ++||.|..
T Consensus 97 v~v~~~~~~l~-----~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d~---~~~~~c~~~~ 168 (1015)
T 3cmm_A 97 VPVNVLDSLDD-----VTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDL---GDEFTVLDPT 168 (1015)
T ss_dssp SCEEECCCCCC-----STTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEC---CSCEEESBSS
T ss_pred CeEEEecCCCC-----HHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEecC---CCceEEeeCC
Confidence 99999988774 358899999999999 99999999999999999999999999999998754 56788864
Q ss_pred CCCCCCCCceeeccCCCCchhHHHHHH
Q 008516 159 KPAPKTYPVCTITSTPSKFVHCIVWAK 185 (563)
Q Consensus 159 ~~~~~~~p~cti~~~p~~~~hci~~a~ 185 (563)
++.|.++++|+| +.| ..+||+.+.+
T Consensus 169 ~~~p~~~~i~~i-~~p-~~v~~l~~~~ 193 (1015)
T 3cmm_A 169 GEEPRTGMVSDI-EPD-GTVTMLDDNR 193 (1015)
T ss_dssp CCCCCEEEEEEE-CTT-CEEEESTTCC
T ss_pred CCCCccccccCC-CCC-ceeEeeeccc
Confidence 345678889999 555 5789987544
No 16
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=98.69 E-value=1.9e-08 Score=85.75 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=63.0
Q ss_pred cCCCccEEEEEcCCCCCHHHHHHHHHHH--hcCCCcCeEEec----CeEEEeeCCCchHHHHHHhhhhhhcchhhhcCcc
Q 008516 432 VCSETPLSLEINTSRSKLRDFVEKIVKA--KLGINFPLIMHG----SNLLYEVGDDLDEVEVANYAANLEKVKIQASSVT 505 (563)
Q Consensus 432 vC~~~~~~l~i~~~~~TL~~li~~~lk~--~~~l~~~~i~~g----~~~LY~~~~~~~~~~~~~~~~nl~k~L~el~~gv 505 (563)
+|+.....++++. ++||++|||.+ .+ ++.|..|+|+.+ ++.||... .+..+++++.||.|+|.|| |+
T Consensus 1 ~Cg~~~~~l~v~~-~~TL~~lid~L-~~~p~~qlk~PSltt~~~~~~k~LYmq~---pp~Lee~Tr~NL~k~l~eL--gl 73 (98)
T 1y8x_B 1 GSSQLPQNIQFSP-SAKLQEVLDYL-TNSASLQMKSPAITATLEGKNRTLYMQS---VTSIEERTRPNLSKTLKEL--GL 73 (98)
T ss_dssp ----CCCCEECCT-TCBHHHHHHHH-HHCTTCCCSSCEEEEEETTEEEEEECSS---CHHHHHHHHHHHHSBSGGG--TC
T ss_pred CCCCCcEEEEECC-chhHHHHHHHH-HhChHhhccCCeeeeecCCCCCeEEEeC---cHHHHHHhHhhhhCCHHHh--CC
Confidence 4776666788884 78999999994 55 789999999998 89999765 3577788999999999999 99
Q ss_pred cCCCcceeecc
Q 008516 506 LCSSPPDFCCS 516 (563)
Q Consensus 506 ~~g~~~~~~~~ 516 (563)
.+|+.+.|++-
T Consensus 74 ~~g~ei~VtD~ 84 (98)
T 1y8x_B 74 VDGQELAVADV 84 (98)
T ss_dssp CTTCEEEEECT
T ss_pred CCCCEEEEECC
Confidence 99999888643
No 17
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.53 E-value=5.1e-08 Score=98.39 Aligned_cols=62 Identities=18% Similarity=0.369 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHh----------------hhhccCCcccCCCcHhHHHHHHHHHHHHHHHcCCCC-CCHHHHHhhhccc
Q 008516 312 RIFLEALKLFFAK----------------REKEIGNLSFDKDDQLAVEFVTAAANIRAASFGISL-HSLFEAKGIAGNI 373 (563)
Q Consensus 312 ~~f~~~~~~l~~~----------------~~~~~~~l~FdKDDd~h~dFV~AasNLRA~~f~I~~-~s~~~~K~iAGnI 373 (563)
..|...+++|+.. .+....||+||..|+.|++||.|||||||.+|||+. .|+-.+..++.++
T Consensus 101 k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~~d~~~i~~~~~~~ 179 (276)
T 1z7l_A 101 TQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQDRAAVASLLQSV 179 (276)
T ss_dssp HHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHhcC
Confidence 3566777888765 122367999999999999999999999999999986 4555555555443
No 18
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=98.43 E-value=2.4e-07 Score=81.60 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=62.8
Q ss_pred cEEEEEcC---CCCCHHHHHHHHHHHhcCCCc-CeEEe--cCeEEEeeCCCchHHHHHHhhhhhhcchhhhcCcccCCCc
Q 008516 437 PLSLEINT---SRSKLRDFVEKIVKAKLGINF-PLIMH--GSNLLYEVGDDLDEVEVANYAANLEKVKIQASSVTLCSSP 510 (563)
Q Consensus 437 ~~~l~i~~---~~~TL~~li~~~lk~~~~l~~-~~i~~--g~~~LY~~~~~~~~~~~~~~~~nl~k~L~el~~gv~~g~~ 510 (563)
+..+.++. +++||++||+. ++++||+.. -+|.- +.++||+++ +++|++|+|++| |+++|+.
T Consensus 7 Rgvl~v~~~dl~~~TL~dLV~~-l~~~~gy~~eiSV~~~~~~rLLyD~D----------fDDnl~k~L~dL--gv~~gsf 73 (127)
T 3onh_A 7 RGVIKLSSDCLNKMKLSDFVVL-IREKYSYPQDISLLDASNQRLLFDYD----------FEDLNDRTLSEI--NLGNGSI 73 (127)
T ss_dssp EEEEEECHHHHHHCBHHHHHHH-HHHHHTCCSSEEEEETTTTEEEEETT----------BCTTTTSBTTTT--TCCTTCE
T ss_pred EEEEEeCcccccccCHHHHHHH-HHHhcCCCCcEEEEecCCCCeEeCCC----------ccccccCcHHHc--CcCCCcE
Confidence 44677765 67999999999 799999975 23442 478999987 458999999999 9999999
Q ss_pred ceeeccCCC----ccceeeEEee
Q 008516 511 PDFCCSCND----ADVLLFCFFN 529 (563)
Q Consensus 511 ~~~~~~~~~----~d~~~~~~~~ 529 (563)
+.+++..++ ..+-+|-.++
T Consensus 74 Ltv~DEdde~~~r~~lelyi~~~ 96 (127)
T 3onh_A 74 ILFSDEEGDTMIRKAIELFLDVD 96 (127)
T ss_dssp EEEEESCCSSEEECCEEEEEEEC
T ss_pred EEEEccccccccccCEEEEEEec
Confidence 999988755 3566665553
No 19
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.66 E-value=0.00016 Score=61.65 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=65.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.++|+|+|+|++|..+++.|...|..+++++|.+ ..|.+.+. .+.+.+ ...++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~-------------------~~~~~~~~------~~~~~~--~~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD-------------------LAALAVLN------RMGVAT--KQVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC-------------------HHHHHHHH------TTTCEE--EECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC-------------------HHHHHHHH------hCCCcE--EEecC
Confidence 4689999999999999999999996678888743 12222221 233333 33444
Q ss_pred CCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
.+...-.+.++++|+||+++.. .....+.+.|...+++.++..
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPF-FLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCG-GGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCc-hhhHHHHHHHHHhCCCEEEec
Confidence 4332234567899999999854 344566778889999888754
No 20
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.56 E-value=0.00016 Score=73.26 Aligned_cols=79 Identities=24% Similarity=0.346 Sum_probs=63.1
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+++++++|+|+||+|..++..|+..|+++|+|++.+ ..|++.+++.+....|.+++.+...
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~~ 185 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVDA 185 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcCH
Confidence 568899999999999999999999999999998643 3688888888888777777766541
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
. . -.+.+.++|+||+|+.
T Consensus 186 --~--~-l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 186 --R--G-IEDVIAAADGVVNATP 203 (283)
T ss_dssp --T--T-HHHHHHHSSEEEECSS
T ss_pred --H--H-HHHHHhcCCEEEECCC
Confidence 1 1 1345678999999975
No 21
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.28 E-value=0.0017 Score=58.84 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=61.9
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.+. .+..+ .
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~------------------------~g~~~--~ 67 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSE------------------------FSGFT--V 67 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTT------------------------CCSEE--E
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhc------------------------CCCcE--E
Confidence 45677899999999999999999999997 799998764322222100 01111 1
Q ss_pred ccCCCCCcchHh-hcccccEEEEccCCHHHHHHHHHHHHh-cCCCEEEec
Q 008516 88 HANVKDPKFNVE-FFKQFNVVLNGLDNLDARRHVNRLCLA-ADVPLVESG 135 (563)
Q Consensus 88 ~~~i~~~~~~~~-~~~~~dvVi~alDn~~ar~~in~~c~~-~~~pli~~g 135 (563)
..+..+...-.+ -+.++|+||.++.+......+...++. .+...+-+-
T Consensus 68 ~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 68 VGDAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp ESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 111111000011 156899999999998877777777765 454444433
No 22
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.08 E-value=0.005 Score=54.53 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=62.9
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
....+|+|+|+|.+|..+++.|...|. +++++|.|. .+.+.+ ++. .. ..+..
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~~~~----~~~--~~--~~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKIELL----EDE--GF--DAVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHHH----HHT--TC--EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHHHHH----HHC--CC--cEEEC
Confidence 345789999999999999999999997 688988541 122222 221 22 33444
Q ss_pred CCCCCcchHh-hcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEe
Q 008516 90 NVKDPKFNVE-FFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVES 134 (563)
Q Consensus 90 ~i~~~~~~~~-~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~ 134 (563)
+.++...-.+ -..++|+||.++++.+....+...++..+.+.+-+
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEE
Confidence 4433211111 24689999999998887777777777765544433
No 23
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.04 E-value=0.0023 Score=67.74 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=71.9
Q ss_pred CcEEEECCcHHHHHHHHHHHHhC-C-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSG-F-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~G-v-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+||+|+|+|++|..+++.|+..| + ..+++.|.+ ..|++.+++.+....+ .++.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 3 688888743 2466666666654321 234455555
Q ss_pred CCCCcchHhhccc--ccEEEEccCCHHHHHHHHHHHHhcCCCEEEe
Q 008516 91 VKDPKFNVEFFKQ--FNVVLNGLDNLDARRHVNRLCLAADVPLVES 134 (563)
Q Consensus 91 i~~~~~~~~~~~~--~dvVi~alDn~~ar~~in~~c~~~~~pli~~ 134 (563)
+++...-.+.+++ .|+||++..... ...+.+.|.+.++.+++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 5443223456666 899999987543 456678899999999985
No 24
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.00 E-value=0.0011 Score=64.78 Aligned_cols=91 Identities=18% Similarity=0.228 Sum_probs=65.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
.|++.+|+|||+|.+|...++.|...|. +++++|.+.- + .+.+...+ ..+. ...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~------------------~---~l~~l~~~--~~i~--~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVS------------------A---EINEWEAK--GQLR--VKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCC------------------H---HHHHHHHT--TSCE--EEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCC------------------H---HHHHHHHc--CCcE--EEE
Confidence 3788999999999999999999999996 7999986411 0 11121111 2233 332
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCE
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPL 131 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pl 131 (563)
.. +..+.+.++|+||.|+|+.+.-..+.+.|. .++|+
T Consensus 82 ~~-----~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~V 118 (223)
T 3dfz_A 82 KK-----VGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLV 118 (223)
T ss_dssp SC-----CCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEE
T ss_pred CC-----CCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEE
Confidence 22 345567899999999999998888888887 77774
No 25
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.99 E-value=0.0025 Score=56.00 Aligned_cols=94 Identities=20% Similarity=0.321 Sum_probs=55.6
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
++...+|+|+|+|++|..+++.|...|. +++++|.+.-....+ ++. ... ...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-----------------------~~~--~~~--~~~ 54 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-----------------------ASY--ATH--AVI 54 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-----------------------TTT--CSE--EEE
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-----------------------HHh--CCE--EEE
Confidence 4567789999999999999999999996 688888653111111 111 111 122
Q ss_pred cCCCCCcchHh-hcccccEEEEccCCH-HHHHHHHHHHHhcCCC
Q 008516 89 ANVKDPKFNVE-FFKQFNVVLNGLDNL-DARRHVNRLCLAADVP 130 (563)
Q Consensus 89 ~~i~~~~~~~~-~~~~~dvVi~alDn~-~ar~~in~~c~~~~~p 130 (563)
.+.++...-.+ -+.++|+|+.++.+. .....+...++..+.+
T Consensus 55 ~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 2hmt_A 55 ANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIP 98 (144)
T ss_dssp CCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred eCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCC
Confidence 22221111111 157899999998864 5445566666665544
No 26
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.90 E-value=0.0028 Score=65.90 Aligned_cols=94 Identities=22% Similarity=0.331 Sum_probs=63.7
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+++||+|+|||.+|..+++.|+.. ..+++.|.+ ..+.+ +..+.+. ....+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~~~~~-------~~~~~~~--~~~~d 64 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------NENLE-------KVKEFAT--PLKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------HHHHH-------HHTTTSE--EEECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------HHHHH-------HHhccCC--cEEEe
Confidence 467899999999999999999753 478877632 12222 2222222 22334
Q ss_pred CCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
+.+...-.++++++|+||+++... .-..+.+.|.+.++.+++..
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 433333356789999999999754 34568899999999999964
No 27
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.78 E-value=0.004 Score=62.46 Aligned_cols=74 Identities=20% Similarity=0.402 Sum_probs=58.5
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
++.++++|+|+||.+..++-.|+..|+++|+|++.+ ..|++.+++.+....|...+.....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~~ 183 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQFS 183 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCCS
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhhh
Confidence 357899999999999999999999999999997521 3588888998888887766543221
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
-..++|+||||+.
T Consensus 184 ----------~~~~~dliiNaTp 196 (269)
T 3tum_A 184 ----------GLEDFDLVANASP 196 (269)
T ss_dssp ----------CSTTCSEEEECSS
T ss_pred ----------hhhcccccccCCc
Confidence 2457899999874
No 28
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.76 E-value=0.0054 Score=53.54 Aligned_cols=90 Identities=19% Similarity=0.273 Sum_probs=54.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
..+|+|+|+|.+|..+++.|...|. +++++|.+. .+++.+++ +. ++. .+..+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~-------------------~~~~~~~~---~~--~~~--~~~~d~ 56 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK-------------------DICKKASA---EI--DAL--VINGDC 56 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHH---HC--SSE--EEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHHHHHH---hc--CcE--EEEcCC
Confidence 3689999999999999999999995 688888432 12221111 11 222 222222
Q ss_pred CCCc-chHhhcccccEEEEccCCHHHHHHHHHHHHhcC
Q 008516 92 KDPK-FNVEFFKQFNVVLNGLDNLDARRHVNRLCLAAD 128 (563)
Q Consensus 92 ~~~~-~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~ 128 (563)
.+.. .....+.++|+|+.++.+......+...+...+
T Consensus 57 ~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 57 TKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp TSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 2111 111225689999999988766555556665544
No 29
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.74 E-value=0.0051 Score=59.15 Aligned_cols=104 Identities=16% Similarity=0.150 Sum_probs=61.4
Q ss_pred HHHHHHHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCc
Q 008516 4 ERQLEAIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQM 82 (563)
Q Consensus 4 ~~~q~kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v 82 (563)
.....++++++|+|.|+ |+||.++++.|+..|. ++++++.+. .+.+.+ .. +
T Consensus 13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~-------------------~~~~~~----~~--~-- 64 (236)
T 3e8x_A 13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNE-------------------EQGPEL----RE--R-- 64 (236)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSG-------------------GGHHHH----HH--T--
T ss_pred cccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECCh-------------------HHHHHH----Hh--C--
Confidence 34567899999999997 9999999999999996 788876432 111111 11 1
Q ss_pred eE-EEeccCCCCCcchHhhcccccEEEEccC-------------CHHHHHHHHHHHHhcCC-CEEEeccc
Q 008516 83 SI-TAHHANVKDPKFNVEFFKQFNVVLNGLD-------------NLDARRHVNRLCLAADV-PLVESGTT 137 (563)
Q Consensus 83 ~I-~~~~~~i~~~~~~~~~~~~~dvVi~alD-------------n~~ar~~in~~c~~~~~-pli~~gt~ 137 (563)
.+ +.+..+++ . .-.+.+.+.|+||++.. |...-..+-+.|++.+. .+|..++.
T Consensus 65 ~~~~~~~~Dl~-~-~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 65 GASDIVVANLE-E-DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp TCSEEEECCTT-S-CCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred CCceEEEcccH-H-HHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 23 44555555 2 22456789999999653 33333455566666654 46665553
No 30
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.72 E-value=0.0027 Score=65.13 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=58.5
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+++++++|+|+||+|..++..|+..|+++|+|++.+. --..|++.+++.+....+ +.+....
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~----------------~~~~~a~~la~~~~~~~~-~~~~~~~- 213 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD----------------DFYANAEKTVEKINSKTD-CKAQLFD- 213 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS----------------TTHHHHHHHHHHHHHHSS-CEEEEEE-
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC----------------chHHHHHHHHHHhhhhcC-CceEEec-
Confidence 5678999999999999999999999999999986331 013578888887776543 4444432
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+.+...-.+.+.++|+||+|+.
T Consensus 214 -~~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 214 -IEDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp -TTCHHHHHHHHHTCSEEEECSS
T ss_pred -cchHHHHHhhhcCCCEEEECcc
Confidence 1110001234678999999874
No 31
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.54 E-value=0.0074 Score=61.77 Aligned_cols=84 Identities=19% Similarity=0.282 Sum_probs=57.6
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+.+++++|+|+||.|..++..|+..|+++|+|++.+. -...|++.+++.+....+ ..+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC----------------chHHHHHHHHHHhhhccC-cceEEech
Confidence 4678999999999999999999999999999985320 013577877777766543 34443321
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.+.....+.+.++|+||||+.
T Consensus 209 --~~l~~~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 209 --ADQHAFTEALASADILTNGTK 229 (312)
T ss_dssp --TCHHHHHHHHHHCSEEEECSS
T ss_pred --HhhhhhHhhccCceEEEECCc
Confidence 110001344678999999875
No 32
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.51 E-value=0.0053 Score=61.72 Aligned_cols=112 Identities=16% Similarity=0.360 Sum_probs=67.7
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCcc--ccCCCCCCCCchHHHHHHHHHHhh-CCC-----
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNR--QFLFRQSHVGQSKAKVARDAVLKF-RPQ----- 81 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnR--qfLf~~~diGk~Ka~va~~~l~~~-np~----- 81 (563)
|++++|+|||+|.+|...++.|...|. +++++|.+.-+. +.. +-+.. +-++ ++. ....+++ ++.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~--l~~~~~~l~~--~~~~-~~~--~~~~~~~~~~~~~~~~ 82 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ-PDY--REDAKRFINPNWDPTK 82 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTT--HHHHHCGGGC----------------CEEECTTCCTTS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcc--hhHHHHHHHh--cccc-ccc--cchhhccccccccccc
Confidence 678999999999999999999999995 699999765211 100 00000 0000 000 0000111 111
Q ss_pred ceE-EEeccCCCCCcchHhhcc------cccEEEEccCCHHHHHHHHHHHHhc---CCCEEEe
Q 008516 82 MSI-TAHHANVKDPKFNVEFFK------QFNVVLNGLDNLDARRHVNRLCLAA---DVPLVES 134 (563)
Q Consensus 82 v~I-~~~~~~i~~~~~~~~~~~------~~dvVi~alDn~~ar~~in~~c~~~---~~pli~~ 134 (563)
-+| ..+... +..+.+. ++|+||.|+++.+....+.+.|+.. ++|+--+
T Consensus 83 g~i~~~i~~~-----~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv 140 (274)
T 1kyq_A 83 NEIYEYIRSD-----FKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVA 140 (274)
T ss_dssp CCCSEEECSS-----CCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEET
T ss_pred CCeeEEEcCC-----CCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC
Confidence 122 333322 2334455 8999999999998888999999998 7766333
No 33
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.47 E-value=0.0097 Score=56.93 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=62.0
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVK 92 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i~ 92 (563)
++|+|+|+|.+|..+++.|...|. .++++|.|. .+++.+++ + .+. ..+..+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~~l~~---~--~~~--~~i~gd~~ 53 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCEEFAK---K--LKA--TIIHGDGS 53 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHHHHH---H--SSS--EEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHHHHHH---H--cCC--eEEEcCCC
Confidence 479999999999999999999997 688988432 12222221 1 122 33444443
Q ss_pred CCc-chHhhcccccEEEEccCCHHHHHHHHHHHHh-cCCCEEEe
Q 008516 93 DPK-FNVEFFKQFNVVLNGLDNLDARRHVNRLCLA-ADVPLVES 134 (563)
Q Consensus 93 ~~~-~~~~~~~~~dvVi~alDn~~ar~~in~~c~~-~~~pli~~ 134 (563)
+.. ....-++++|+|+.++++......+...++. ++.+-+-+
T Consensus 54 ~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 54 HKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 321 1222367899999999998877777777765 45544443
No 34
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.46 E-value=0.015 Score=52.29 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=61.1
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.- .+++.+++. ...++ ..+.++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~~~~~~---~~~~~--~~i~gd 57 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIKQLEQR---LGDNA--DVIPGD 57 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHHHHHHH---HCTTC--EEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHHHHHHh---hcCCC--eEEEcC
Confidence 46789999999999999999999996 6889885410 122222221 11233 334445
Q ss_pred CCCCcc-hHhhcccccEEEEccCCHHHHHHHHHHHHhc
Q 008516 91 VKDPKF-NVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 127 (563)
Q Consensus 91 i~~~~~-~~~~~~~~dvVi~alDn~~ar~~in~~c~~~ 127 (563)
.++... ...-+.++|+||.++++.+.-..+...++..
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 58 SNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp TTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 443221 1223678999999999887777777777665
No 35
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.36 E-value=0.0061 Score=63.69 Aligned_cols=94 Identities=21% Similarity=0.325 Sum_probs=62.6
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
++++|+|+|+|++|..+++.|+.. .++++.|.+ ..|++.+++ ... ....+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~-------------------~~~a~~la~-------~~~--~~~~d 64 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------NENLEKVKE-------FAT--PLKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------HHHHHHHTT-------TSE--EEECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECC-------------------HHHHHHHHh-------hCC--eEEEe
Confidence 578999999999999999999987 578887632 233333322 111 11112
Q ss_pred CCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
+.+...-.+.++++|+||+++... .-..+.+.|.+.++.+++..
T Consensus 65 ~~~~~~l~~ll~~~DvVIn~~P~~-~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TTCHHHHHHHHTTCSCEEECCCHH-HHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHhCCCEEEECCChh-hhHHHHHHHHHhCCeEEEcc
Confidence 222122246678999999997643 23346788999999999854
No 36
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.36 E-value=0.019 Score=53.20 Aligned_cols=91 Identities=18% Similarity=0.166 Sum_probs=57.2
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+.+|+|+|+|.+|..+++.|... |. +++++|.|. .|++. +++. ++. ...
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~~----~~~~--g~~--~~~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQQ----HRSE--GRN--VIS 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHHH----HHHT--TCC--EEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHHH----HHHC--CCC--EEE
Confidence 4467999999999999999999999 97 688888543 12222 2222 222 222
Q ss_pred cCCCCCcchHhh--cccccEEEEccCCHHHHHHHHHHHHhcC
Q 008516 89 ANVKDPKFNVEF--FKQFNVVLNGLDNLDARRHVNRLCLAAD 128 (563)
Q Consensus 89 ~~i~~~~~~~~~--~~~~dvVi~alDn~~ar~~in~~c~~~~ 128 (563)
.+.++...-.+. +.++|+||.++.+...-..+-..++..+
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 233221111222 5689999999988766555555555544
No 37
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.32 E-value=0.0079 Score=60.31 Aligned_cols=74 Identities=22% Similarity=0.386 Sum_probs=52.5
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+.+++++|+|+||.|..++..|+..|+.+|+|++.+ ..|++.+++.+.. . .+.+..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~--~--~~~~~~- 173 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD-------------------MAKALALRNELDH--S--RLRISR- 173 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHCC--T--TEEEEC-
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC-------------------HHHHHHHHHHhcc--C--CeeEee-
Confidence 457899999999999999999999999999997522 2477777766654 1 233321
Q ss_pred CCCCCcchHhhcccccEEEEccCC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+. ... . .++|+||+|+..
T Consensus 174 -~~--~l~-~--~~~DivInaTp~ 191 (272)
T 3pwz_A 174 -YE--ALE-G--QSFDIVVNATSA 191 (272)
T ss_dssp -SG--GGT-T--CCCSEEEECSSG
T ss_pred -HH--Hhc-c--cCCCEEEECCCC
Confidence 11 011 1 689999999863
No 38
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.29 E-value=0.02 Score=54.31 Aligned_cols=97 Identities=18% Similarity=0.277 Sum_probs=64.1
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.| .|++|..+++.|...|. ++++++.+.-....+ . -.++.+..++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------------------~--~~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIE--------------------------N--EHLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCC--------------------------C--TTEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhc--------------------------c--CceEEEEecC
Confidence 6899999 59999999999999994 788887653221111 1 2345556666
Q ss_pred CCCcchHhhcccccEEEEccC-----------CHHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 92 KDPKFNVEFFKQFNVVLNGLD-----------NLDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alD-----------n~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
++...-.+.++++|+||++.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 543333456778888888643 33444556667777775 577776655
No 39
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.28 E-value=0.0099 Score=59.90 Aligned_cols=74 Identities=24% Similarity=0.424 Sum_probs=54.1
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+.+++++|+|+||+|..++..|+..|+.+|+|++.+ ..|++.+++.+.... .+.+....
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~-~~~~~~~~- 182 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG-EVKAQAFE- 182 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS-CEEEEEGG-
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC-CeeEeeHH-
Confidence 467899999999999999999999999999998632 257777777776542 22322211
Q ss_pred CCCCCcchHhhcccccEEEEccCC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+.-.++|+||+++..
T Consensus 183 ---------~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 183 ---------QLKQSYDVIINSTSA 197 (281)
T ss_dssp ---------GCCSCEEEEEECSCC
T ss_pred ---------HhcCCCCEEEEcCcC
Confidence 112689999999864
No 40
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.28 E-value=0.018 Score=53.33 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=60.1
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+++|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ ..+ +++.+..+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-------------------------~~~--~~~~~~~D 54 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSE-------------------------GPR--PAHVVVGD 54 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSS-------------------------SCC--CSEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccc-------------------------cCC--ceEEEEec
Confidence 368999997 9999999999999994 788887653211100 011 23344445
Q ss_pred CCCCcchHhhcccccEEEEccC----------CHHHHHHHHHHHHhcCC-CEEEeccccc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLD----------NLDARRHVNRLCLAADV-PLVESGTTGF 139 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alD----------n~~ar~~in~~c~~~~~-pli~~gt~G~ 139 (563)
+++...-.+.++++|+||++.. |...-..+-+.|.+.++ .+|..++.+.
T Consensus 55 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 55 VLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL 114 (206)
T ss_dssp TTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred CCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeee
Confidence 5433222345667788887643 22334445556666664 4666665544
No 41
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.27 E-value=0.011 Score=60.12 Aligned_cols=42 Identities=19% Similarity=0.337 Sum_probs=27.1
Q ss_pred CHHHHHHHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 3 SERQLEAIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 3 ~~~~q~kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++..++.+..++|+|.|+ |.||..+++.|...|. +++++|..
T Consensus 10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp -----------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 455677889999999997 9999999999999996 67777654
No 42
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.26 E-value=0.012 Score=63.19 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=66.6
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+++++|+|||.|.+|...++.|...|. +++++|.+.-+ .+.+...+ .. ++.+..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~---------------------~~~~l~~~--~~--i~~~~~ 63 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP---------------------QFTVWANE--GM--LTLVEG 63 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH---------------------HHHHHHTT--TS--CEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH---------------------HHHHHHhc--CC--EEEEEC
Confidence 678999999999999999999999995 79999964110 01111111 12 333333
Q ss_pred CCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCE
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPL 131 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pl 131 (563)
. +..+.+.++|+||.++++.+....+.+.|++.++|+
T Consensus 64 ~-----~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 64 P-----FDETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp S-----CCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred C-----CCccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 2 234556799999999999888888999999999985
No 43
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.24 E-value=0.016 Score=57.27 Aligned_cols=99 Identities=17% Similarity=0.275 Sum_probs=63.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+.++|+|.|+|.||..+++.|...|. +++.++.+.- ++ .+. ++.+..+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~--------------------------~~~--~~~~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQ---PM--------------------------PAG--VQTLIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTS---CC--------------------------CTT--CCEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcc---cc--------------------------ccC--CceEEcc
Confidence 45789999999999999999999997 6777764311 10 122 3334455
Q ss_pred CCCCcchHhhccc-ccEEEEcc------------CCHHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 91 VKDPKFNVEFFKQ-FNVVLNGL------------DNLDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 91 i~~~~~~~~~~~~-~dvVi~al------------Dn~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
+.+...-.+.+++ +|+||.+. .|...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 5443322345555 99999864 134444555666666664 577777766555
No 44
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.09 E-value=0.0094 Score=64.22 Aligned_cols=98 Identities=10% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhC-C--CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSG-F--QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~G-v--g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.||+|+|+||+|+.++..|++.+ + ..|+++|.+.. ++.. .+.. .+++..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~~~----~~~~-----g~~~~~-- 65 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KVDV----AQQY-----GVSFKL-- 65 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SCCH----HHHH-----TCEEEE--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hhhH----Hhhc-----CCceeE--
Confidence 578999999999999999999864 5 58999985442 2111 1111 233333
Q ss_pred cCCCCCcc---hHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccc
Q 008516 89 ANVKDPKF---NVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTT 137 (563)
Q Consensus 89 ~~i~~~~~---~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~ 137 (563)
..++..+. -..++++.|+|||+...... ..+-+.|++.|+-+++....
T Consensus 66 ~~Vdadnv~~~l~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 66 QQITPQNYLEVIGSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAATE 116 (480)
T ss_dssp CCCCTTTHHHHTGGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSCC
T ss_pred EeccchhHHHHHHHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCCC
Confidence 23333322 12456667999998765543 45678899999999999864
No 45
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.04 E-value=0.0094 Score=61.23 Aligned_cols=112 Identities=20% Similarity=0.271 Sum_probs=66.9
Q ss_pred HHHHHHHcCCcEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 4 ERQLEAIKGAKVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 4 ~~~q~kL~~~~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
+.+...++.++|+|.| .|.||..+++.|... |. +++++|...-....+ ...
T Consensus 16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~--------------------------~~~ 68 (372)
T 3slg_A 16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDL--------------------------VKH 68 (372)
T ss_dssp -------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGG--------------------------GGS
T ss_pred hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhh--------------------------ccC
Confidence 3445678889999999 599999999999998 65 688877543111100 001
Q ss_pred ceEEEeccCCC-CCcchHhhcccccEEEEccC--CHHH---------------HHHHHHHHHhcCCCEEEeccccceee
Q 008516 82 MSITAHHANVK-DPKFNVEFFKQFNVVLNGLD--NLDA---------------RRHVNRLCLAADVPLVESGTTGFLGQ 142 (563)
Q Consensus 82 v~I~~~~~~i~-~~~~~~~~~~~~dvVi~alD--n~~a---------------r~~in~~c~~~~~pli~~gt~G~~G~ 142 (563)
-+++.+..+++ +...-.+.++++|+||.+.. .... -..+-+.|.+.+..+|..++.+.+|.
T Consensus 69 ~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 69 ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM 147 (372)
T ss_dssp TTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBS
T ss_pred CCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCC
Confidence 24556666775 43333456778999998432 1111 13345566666678888887766654
No 46
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.03 E-value=0.0081 Score=60.88 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=52.0
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+..++|+|+|+||+|..++..|+..|+.+|+++|.+. .|++.+++.+....+ .+...
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~-------------------~ka~~la~~~~~~~~--~~~~~-- 195 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV-------------------EKAERLVREGDERRS--AYFSL-- 195 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH-------------------HHHHHHHHHSCSSSC--CEECH--
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHhhhccC--ceeeH--
Confidence 4578999999999999999999999999999986332 455555544322111 11110
Q ss_pred CCCCCcchHhhcccccEEEEccCC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
....+.+.++|+||+++..
T Consensus 196 -----~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 196 -----AEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp -----HHHHHTGGGCSEEEECSCT
T ss_pred -----HHHHhhhccCCEEEECCCC
Confidence 0113456889999999864
No 47
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.02 E-value=0.032 Score=56.63 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=70.0
Q ss_pred HHHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC---ce
Q 008516 8 EAIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ---MS 83 (563)
Q Consensus 8 ~kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~---v~ 83 (563)
..++.++|+|.|+ |.||..+++.|...|. +++.+|...-. ... ..+.+....+. -+
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~----~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG---------------HQY----NLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHH----HHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC---------------chh----hhhhhhhccccccCCc
Confidence 4567899999995 9999999999999995 67776632210 001 11122221110 24
Q ss_pred EEEeccCCCCCcchHhhcccccEEEEccCC-----------------HHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 84 ITAHHANVKDPKFNVEFFKQFNVVLNGLDN-----------------LDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 84 I~~~~~~i~~~~~~~~~~~~~dvVi~alDn-----------------~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
++.+..++.+...-.+.++++|+||.+... ...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 81 ~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred eEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 566677776544345667899999997532 1112235556777775 677777766554
No 48
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.046 Score=54.68 Aligned_cols=85 Identities=14% Similarity=0.223 Sum_probs=63.8
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCC--eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCce
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQ--DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMS 83 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg--~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~ 83 (563)
...|.+++++|.| .||||.++++.|+..|.+ ++.++|.+ ..+.+.+++.+....|+.+
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 88 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPNAK 88 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTTCE
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCCCe
Confidence 4578899999998 589999999999999875 77777632 2456667777777778888
Q ss_pred EEEeccCCCCCcchHhhc-------ccccEEEEc
Q 008516 84 ITAHHANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 84 I~~~~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
+..+..++++...-..++ .+.|+||++
T Consensus 89 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 89 VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp EEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 988888886543333333 367888884
No 49
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.87 E-value=0.033 Score=52.64 Aligned_cols=96 Identities=21% Similarity=0.278 Sum_probs=63.4
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.| .|++|.++++.|+..|. ++++++.+.-....+ + +++.+..++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~--~~~~~~~D~ 50 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------N--NVKAVHFDV 50 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------T--TEEEEECCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------C--CceEEEecc
Confidence 3799999 79999999999999995 788887543111000 2 355566666
Q ss_pred CC-CcchHhhcccccEEEEccC---------CHHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 92 KD-PKFNVEFFKQFNVVLNGLD---------NLDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 92 ~~-~~~~~~~~~~~dvVi~alD---------n~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
++ ...-.+.++++|+||++.. |...-..+-+.|++.++ .+|..++.+
T Consensus 51 ~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 51 DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp TSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred cCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 55 3333456788999999653 44445566667777775 466665543
No 50
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.86 E-value=0.029 Score=49.75 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=55.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
+.+|+|+|+|.+|..+++.|...|. .++++|.|. .+.+. +++ .++. .+..+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~~----~~~--~g~~--~i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR-------------------TRVDE----LRE--RGVR--AVLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHH----HHH--TTCE--EEESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH-------------------HHHHH----HHH--cCCC--EEECCC
Confidence 4689999999999999999999997 689988543 12222 222 2333 344444
Q ss_pred CCCcc-hHhhcccccEEEEccCCHHHHHHHHHHHHh
Q 008516 92 KDPKF-NVEFFKQFNVVLNGLDNLDARRHVNRLCLA 126 (563)
Q Consensus 92 ~~~~~-~~~~~~~~dvVi~alDn~~ar~~in~~c~~ 126 (563)
++... ...-..++|+||.++++...-..+-..++.
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~ 94 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARA 94 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHH
Confidence 32211 111256899999999887655545445444
No 51
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.77 E-value=0.0092 Score=53.24 Aligned_cols=75 Identities=12% Similarity=0.216 Sum_probs=51.5
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+....+|+|+|+|++|..+++.|...|+. ++++|.+ ..|++.+++.+. ..+...
T Consensus 17 ~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~-------------------~~~~~~~a~~~~-----~~~~~~ 71 (144)
T 3oj0_A 17 RKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN-------------------IDHVRAFAEKYE-----YEYVLI 71 (144)
T ss_dssp HHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC-------------------HHHHHHHHHHHT-----CEEEEC
T ss_pred HhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC-------------------HHHHHHHHHHhC-----CceEee
Confidence 344588999999999999999999999987 9988743 234444444332 222211
Q ss_pred ccCCCCCcchHhhcccccEEEEccCCH
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDNL 114 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn~ 114 (563)
. ...+.+.++|+||+++...
T Consensus 72 ~-------~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 72 N-------DIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp S-------CHHHHHHTCSEEEECSCCS
T ss_pred c-------CHHHHhcCCCEEEEeCCCC
Confidence 1 1245678899999998754
No 52
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.76 E-value=0.078 Score=53.16 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=52.8
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe-
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH- 87 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~- 87 (563)
+++++|+|.|+ |+||..+++.|+..|. +++++|.+. .+.+.+.+.+....+ -+++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 45688999996 9999999999999996 677765321 233333344433322 245555
Q ss_pred ccCCCCCcchHhhcccccEEEEcc
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGL 111 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~al 111 (563)
..++++...-.+.+++.|+||.+.
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A 91 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIA 91 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeC
Confidence 566654433345677899999964
No 53
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.68 E-value=0.068 Score=51.05 Aligned_cols=76 Identities=16% Similarity=0.297 Sum_probs=50.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+.+++|+|.| .|+||.++++.|+..|.. +++++|.+.-. +.. .+ .+ .+..+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~---~~~-----------~~-----------~~--~~~~~ 68 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT---FDE-----------EA-----------YK--NVNQE 68 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC---CCS-----------GG-----------GG--GCEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC---ccc-----------cc-----------cC--CceEE
Confidence 6678999999 699999999999999973 78888754311 100 00 01 23445
Q ss_pred ccCCCCCcchHhhcccccEEEEccC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
..++++...-.+.+++.|+||++..
T Consensus 69 ~~D~~d~~~~~~~~~~~d~vi~~ag 93 (242)
T 2bka_A 69 VVDFEKLDDYASAFQGHDVGFCCLG 93 (242)
T ss_dssp ECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred ecCcCCHHHHHHHhcCCCEEEECCC
Confidence 5566443333456788999999754
No 54
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.64 E-value=0.038 Score=55.80 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=31.5
Q ss_pred HHHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3567889999996 9999999999999995 78888754
No 55
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.62 E-value=0.1 Score=54.66 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=59.9
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC--CceE
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP--QMSI 84 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np--~v~I 84 (563)
..+++++|+|.| .|+||+++++.|+..|..+++++|.. ..+...+.+.+.+..+ ..++
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 457789999999 58999999999999997788887632 2334444455555444 3578
Q ss_pred EEeccCCCCCcchHhhc--ccccEEEEcc
Q 008516 85 TAHHANVKDPKFNVEFF--KQFNVVLNGL 111 (563)
Q Consensus 85 ~~~~~~i~~~~~~~~~~--~~~dvVi~al 111 (563)
+.+..++++......++ .+.|+|+++.
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 120 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLS 120 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 88888886543333333 5899999864
No 56
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.60 E-value=0.053 Score=54.13 Aligned_cols=98 Identities=12% Similarity=0.167 Sum_probs=61.9
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.| .|.+|..+++.|...|. +++.++.+.-... +. +++.+..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~-----------------------------~~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN-----------------------------DYEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC-----------------------------------CCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC-----------------------------ceEEEEcc
Confidence 47899999 59999999999999996 6777775410000 00 23334444
Q ss_pred CCCCcchHhhcccccEEEEccC-------------CHHHHHHHHHHHHhcCCC-EEEecccccee
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLD-------------NLDARRHVNRLCLAADVP-LVESGTTGFLG 141 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alD-------------n~~ar~~in~~c~~~~~p-li~~gt~G~~G 141 (563)
++ ...-.+.++++|+||.+.. |...-..+-+.|.+.+++ +|..++.+.+|
T Consensus 51 l~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YT-LEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp CC-HHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred cc-HHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 44 3223445667787777532 233345566677888876 88777766554
No 57
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.59 E-value=0.049 Score=55.41 Aligned_cols=115 Identities=17% Similarity=0.089 Sum_probs=67.7
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+..++|+|.|+ |+||..+++.|+..|. +++++|...- -...+...+.+.+.... .-+++.+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~~~ 87 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFAT---------------GHQRNLDEVRSLVSEKQ-WSNFKFIQ 87 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSS---------------CCHHHHHHHHHHSCHHH-HTTEEEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCc---------------cchhhHHHHhhhccccc-CCceEEEE
Confidence 67789999997 9999999999999995 6777764211 00112222222111110 12455666
Q ss_pred cCCCCCcchHhhcccccEEEEccCC---------H--------HHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDN---------L--------DARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn---------~--------~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
.++.+...-.+.++++|+||++... . ..-..+-+.|...++ .+|..++.+.+|
T Consensus 88 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 88 GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 6775443334567899999996431 1 112344556666665 477776665444
No 58
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.56 E-value=0.032 Score=57.32 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=52.2
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC----CCceE
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR----PQMSI 84 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n----p~v~I 84 (563)
+++..||.|+|+|.+|..++..|+..|.++++++|.+. .|++..+..+.+.+ ...+|
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v 64 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKF 64 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCE
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEE
Confidence 45678999999999999999999999988899988432 23333333444332 23455
Q ss_pred EEeccCCCCCcchHhhcccccEEEEccC
Q 008516 85 TAHHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.+..+ .+-++++|+||.+..
T Consensus 65 ~~t~d--------~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 65 TGAND--------YAAIEGADVVIVTAG 84 (324)
T ss_dssp EEESS--------GGGGTTCSEEEECCS
T ss_pred EEeCC--------HHHHCCCCEEEEccC
Confidence 54321 245789999999864
No 59
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.55 E-value=0.011 Score=59.90 Aligned_cols=111 Identities=18% Similarity=0.168 Sum_probs=64.4
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+..++|+|.|+ |.||..+++.|...|.. ++..+|...... +. +.+..+...-+++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~-~~--------------------~~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG-NL--------------------NNVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC-CG--------------------GGGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc-ch--------------------hhhhhhccCCCeEEE
Confidence 55678999997 99999999999999943 455555432110 00 001112222345556
Q ss_pred ccCCCCCcchHhhccc--ccEEEEccCC-----------------HHHHHHHHHHHHhcCCC-EEEecccccee
Q 008516 88 HANVKDPKFNVEFFKQ--FNVVLNGLDN-----------------LDARRHVNRLCLAADVP-LVESGTTGFLG 141 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~--~dvVi~alDn-----------------~~ar~~in~~c~~~~~p-li~~gt~G~~G 141 (563)
..++++...-.+.+++ +|+||.+... ...-..+-+.|...+++ +|..++.+.+|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 6666544333445555 8888875321 11124455667777776 88777766555
No 60
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.47 E-value=0.079 Score=54.19 Aligned_cols=80 Identities=11% Similarity=0.163 Sum_probs=56.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
.+++++|+|.| .|++|..+++.|+.. |..+++++|.+. .|...+++.+. ..++..
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~~----~~~v~~ 74 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEFN----DPRMRF 74 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHHC----CTTEEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHhc----CCCEEE
Confidence 46678999999 599999999999999 987888877432 23333333332 235666
Q ss_pred eccCCCCCcchHhhcccccEEEEcc
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGL 111 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~al 111 (563)
+..++.+...-.+.+++.|+||.+.
T Consensus 75 ~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 75 FIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp EECCTTCHHHHHHHTTTCSEEEECC
T ss_pred EECCCCCHHHHHHHHhcCCEEEECC
Confidence 7777765433346678999999964
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.44 E-value=0.025 Score=56.54 Aligned_cols=32 Identities=25% Similarity=0.561 Sum_probs=28.8
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999998 78888744
No 62
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.43 E-value=0.075 Score=53.98 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=64.3
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+..++|+|.|+ |.+|..+++.|...| .++++++.+. .-...|+..+. .+.. + .++.+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~---------------~~~~~~~~~~~-~l~~--~--~v~~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPG---------------PRSPSKAKIFK-ALED--K--GAIIVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSS---------------CCCHHHHHHHH-HHHH--T--TCEEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCC---------------CCChhHHHHHH-HHHh--C--CcEEEE
Confidence 45679999998 999999999999999 4677766432 11112333221 2221 2 344556
Q ss_pred cCCCCCcchHhhcc--cccEEEEccC--CHHHHHHHHHHHHhcC-CCEEE
Q 008516 89 ANVKDPKFNVEFFK--QFNVVLNGLD--NLDARRHVNRLCLAAD-VPLVE 133 (563)
Q Consensus 89 ~~i~~~~~~~~~~~--~~dvVi~alD--n~~ar~~in~~c~~~~-~pli~ 133 (563)
.++.+...-.+.++ ++|+||.+.. |...-..+-+.|...+ ++.+-
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 66655433456677 9999999754 5555566677777777 65543
No 63
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.30 E-value=0.079 Score=53.27 Aligned_cols=101 Identities=18% Similarity=0.228 Sum_probs=60.7
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.|+ |.||..+++.|+..|. +++++|.+.-...++. . + +++.+..++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-----------------------~--~--~~~~~~~Dl 65 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLA-----------------------Y--L--EPECRVAEM 65 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGG-----------------------G--G--CCEEEECCT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhc-----------------------c--C--CeEEEEecC
Confidence 58999995 9999999999999995 7888875432111110 0 1 234445555
Q ss_pred CCCcchHhhcccccEEEEccCC---------------HHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDN---------------LDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn---------------~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
++...-.+.+++.|+||.+... ...-..+-+.|...++ .+|..++.+.+|
T Consensus 66 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 66 LDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp TCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred CCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 4432234556778888885421 1222345556666664 678777766544
No 64
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.30 E-value=0.067 Score=51.36 Aligned_cols=105 Identities=16% Similarity=0.127 Sum_probs=64.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+..++|+|.| .|+||.++++.|+..|--++++++.+.-....+ . .-.++.+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------------------------~-~~~~~~~ 72 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------------------------Y-PTNSQII 72 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------------------------C-CTTEEEE
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------------------------c-cCCcEEE
Confidence 34456899999 699999999999999943788877543211100 0 0135566
Q ss_pred ccCCCCCcchHhhcccccEEEEccCCHHH---HHHHHHHHHhcCC-CEEEeccccce
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDNLDA---RRHVNRLCLAADV-PLVESGTTGFL 140 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn~~a---r~~in~~c~~~~~-pli~~gt~G~~ 140 (563)
..++++...-.+.+++.|+||++...... -..+-+.+++.++ .+|..++.+.+
T Consensus 73 ~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~ 129 (236)
T 3qvo_A 73 MGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIY 129 (236)
T ss_dssp ECCTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred EecCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceec
Confidence 67776544445678899999986543221 2234445566665 47777665543
No 65
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.25 E-value=0.079 Score=52.61 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=59.9
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.|+ |.||..+++.|+..|. +++++|...-... .. ..+ .++.+..++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----~~---------------------~~~--~~~~~~~Dl 52 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRR----EF---------------------VNP--SAELHVRDL 52 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSCCG----GG---------------------SCT--TSEEECCCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCch----hh---------------------cCC--CceEEECcc
Confidence 47999997 9999999999999996 6777764321100 00 022 234445555
Q ss_pred CCCcchHhhcccccEEEEccC-----------------CHHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 92 KDPKFNVEFFKQFNVVLNGLD-----------------NLDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alD-----------------n~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
.+.. -.+.++. |+||++.. |...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 53 ~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg 118 (312)
T 3ko8_A 53 KDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG 118 (312)
T ss_dssp TSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred ccHH-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhC
Confidence 4433 3344555 99988543 22222345566666665 577777666554
No 66
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.03 Score=60.39 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=61.4
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
.+..++|+|+|+|++|..+++.|+..|-.+++++|.+ ..|++.+++. +.+.. ..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~-------------------~~ka~~la~~-----~~~~~--~~ 73 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT-------------------LANAQALAKP-----SGSKA--IS 73 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS-------------------HHHHHHHHGG-----GTCEE--EE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC-------------------HHHHHHHHHh-----cCCcE--EE
Confidence 4667899999999999999999999843378887633 1344333321 22322 22
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
.++.+...-.+.++++|+||+++.... ...+.+.|...++.+++..
T Consensus 74 ~D~~d~~~l~~~l~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 74 LDVTDDSALDKVLADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp CCTTCHHHHHHHHHTSSEEEECSCGGG-HHHHHHHHHHHTCEEEECS
T ss_pred EecCCHHHHHHHHcCCCEEEECCchhh-hHHHHHHHHhcCCEEEEee
Confidence 233221112345678999999987532 2335667778888777753
No 67
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.23 E-value=0.062 Score=50.80 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=61.3
Q ss_pred CcEEEEC-CcHHHHHHHHHHH-HhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 13 AKVLMVG-AGGIGCELLKTLA-LSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLa-l~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
++|+|.| .|++|.++++.|+ ..|. ++++++.+.- .+.+. +....+ +++.+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~------------------~~~~~----~~~~~~--~~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLK------------------TRIPP----EIIDHE--RVTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHH------------------HHSCH----HHHTST--TEEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCcc------------------ccchh----hccCCC--ceEEEECC
Confidence 3599999 5999999999999 8897 6887764310 01111 111222 45666677
Q ss_pred CCCCcchHhhcccccEEEEccC--CHHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLD--NLDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alD--n~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
+++...-.+.+++.|+||++.. |...+ .+-+.+.+.+. .+|..++.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~~~-~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSDMA-SIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHHHH-HHHHHHHHTTCCEEEEEEETT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChhHH-HHHHHHHhcCCCeEEEEeece
Confidence 7654434567789999999764 34433 33444555554 456555444
No 68
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.23 E-value=0.061 Score=52.80 Aligned_cols=93 Identities=15% Similarity=0.267 Sum_probs=58.6
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
+...+|.|||+|.+|..+++.|+..|...++++|.+. .+++.+++.+ ++.+ . .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~--~-~ 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV-----EAEY--T-T 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT-----TCEE--E-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc-----CCce--e-C
Confidence 4457999999999999999999999976577776321 2333332221 1222 1 1
Q ss_pred CCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHh--cCCCEEEec
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLA--ADVPLVESG 135 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~g 135 (563)
+ ..+.++++|+|+.++-+...+..+.++... .+..+++..
T Consensus 61 ~------~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 61 D------LAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp C------GGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred C------HHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 1 134567899999999876665555554322 344566553
No 69
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.16 E-value=0.052 Score=54.06 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=31.0
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+..++|+|+|+|++|..+++.|...|+ +++++|.
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r 160 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNR 160 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEEC
Confidence 567899999999999999999999998 8998864
No 70
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.12 E-value=0.024 Score=56.72 Aligned_cols=80 Identities=24% Similarity=0.276 Sum_probs=53.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| +||+|..+++.|+..|.. ++++|.+ ..|++.+++.+... +.+.+ ..
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~-------------------~~~~~~l~~~~~~~-~~~~~--~~ 173 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRK-------------------LDKAQAAADSVNKR-FKVNV--TA 173 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESS-------------------HHHHHHHHHHHHHH-HTCCC--EE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECC-------------------HHHHHHHHHHHHhc-CCcEE--EE
Confidence 5678999999 999999999999999985 8887632 13566555555432 12222 22
Q ss_pred cCCCCCcchHhhcccccEEEEccC
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.++++...-.+.++++|+||++..
T Consensus 174 ~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 174 AETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp EECCSHHHHHHHTTTCSEEEECCC
T ss_pred ecCCCHHHHHHHHHhCCEEEECCC
Confidence 233322222356778899999874
No 71
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=95.12 E-value=0.058 Score=53.52 Aligned_cols=65 Identities=22% Similarity=0.275 Sum_probs=42.0
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEE
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSIT 85 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~ 85 (563)
...+++++|+|.| .||||.++++.|+..|. ++.++|.+ ..|.+.+.+.+++..+ .++.
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~-~~~~ 65 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD-------------------VTKGHEAVEKLKNSNH-ENVV 65 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHTTTC-CSEE
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC-CceE
Confidence 3456778889988 58999999999999997 68877643 2455555666655543 2455
Q ss_pred EeccCCC
Q 008516 86 AHHANVK 92 (563)
Q Consensus 86 ~~~~~i~ 92 (563)
.+..+++
T Consensus 66 ~~~~Dl~ 72 (311)
T 3o26_A 66 FHQLDVT 72 (311)
T ss_dssp EEECCTT
T ss_pred EEEccCC
Confidence 5555554
No 72
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.10 E-value=0.05 Score=54.42 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=53.8
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCC--eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQ--DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg--~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+..+|.|||+|.+|..+++.|+..|+. +++++|.+. .|++.+++. + ++++ ..
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~---~--gi~~--~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEK---C--GVHT--TQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHT---T--CCEE--ES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHH---c--CCEE--eC
Confidence 457899999999999999999999962 688876322 233333221 1 2222 11
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHH
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLC 124 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c 124 (563)
...+.+++.|+||.|+.....+..+.++.
T Consensus 56 -------~~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 56 -------DNRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp -------CHHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred -------ChHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 13456789999999996655566565554
No 73
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.05 E-value=0.051 Score=55.68 Aligned_cols=76 Identities=17% Similarity=0.270 Sum_probs=52.3
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC----CCceEE
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR----PQMSIT 85 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n----p~v~I~ 85 (563)
+...||.|+|+|.+|..++..|+..|+++++++|.+. .|++..+..+.+.. ..++|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4467999999999999999999999988899988432 23333334444332 244555
Q ss_pred EeccCCCCCcchHhhcccccEEEEccC
Q 008516 86 AHHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+.. +.+-++++|+||.+..
T Consensus 64 ~t~--------d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 64 GTN--------DYKDLENSDVVIVTAG 82 (321)
T ss_dssp EES--------CGGGGTTCSEEEECCS
T ss_pred EcC--------CHHHHCCCCEEEEcCC
Confidence 422 1245789999999853
No 74
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.05 E-value=0.082 Score=51.85 Aligned_cols=98 Identities=15% Similarity=0.068 Sum_probs=62.0
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+.++|+|.|+|.+|..+++.|...|. +++.++.+. .+...+ .. + .++.+..+
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~----~~--~--~~~~~~~D 55 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQMEAI----RA--S--GAEPLLWP 55 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHHHH----HH--T--TEEEEESS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhhhH----hh--C--CCeEEEec
Confidence 34799999999999999999999996 577765321 122111 11 2 35556666
Q ss_pred CCCCcchHhhcccccEEEEccCC----HHHHHHHHHHHHh--cC-CCEEEecccccee
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDN----LDARRHVNRLCLA--AD-VPLVESGTTGFLG 141 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn----~~ar~~in~~c~~--~~-~pli~~gt~G~~G 141 (563)
+.+. + +.++|+||.+... ......+-+.|.. .+ ..+|..++.+.+|
T Consensus 56 ~~d~----~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 56 GEEP----S-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp SSCC----C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cccc----c-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 6542 2 7899999996521 1233444555665 44 4577777777665
No 75
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.04 E-value=0.081 Score=50.39 Aligned_cols=37 Identities=14% Similarity=0.398 Sum_probs=28.8
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
-++...+|.|+|+|.+|+.+++.|+..|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35778899999999999999999999996 68888743
No 76
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.04 E-value=0.028 Score=53.09 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=58.3
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
+||+|.|+ |+||.++++.|+..|. ++++++.+. .+.. .+ ..+. ++.+..++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~----~~--~~~~--~~~~~~D~ 52 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDP-------------------QKAA----DR--LGAT--VATLVKEP 52 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHH----HH--TCTT--SEEEECCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecc-------------------cccc----cc--cCCC--ceEEeccc
Confidence 37999997 9999999999999996 677765321 1111 11 1123 44455666
Q ss_pred CCCcchHhhcccccEEEEccCC----------HHHHHHHHHHHHhcCCCEEEeccc
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDN----------LDARRHVNRLCLAADVPLVESGTT 137 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn----------~~ar~~in~~c~~~~~pli~~gt~ 137 (563)
++... +.+.++|+||++... ...-..+-+.|.+.+..+|..++.
T Consensus 53 ~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 53 LVLTE--ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp GGCCH--HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred ccccH--hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 44332 677899999997532 223333444455555566666554
No 77
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.03 E-value=0.05 Score=53.05 Aligned_cols=65 Identities=15% Similarity=0.325 Sum_probs=46.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC-ceEEE
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ-MSITA 86 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~-v~I~~ 86 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.+.++. .++..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 35678899998 58999999999999998 68887643 24556666666666554 45666
Q ss_pred eccCCCC
Q 008516 87 HHANVKD 93 (563)
Q Consensus 87 ~~~~i~~ 93 (563)
+..++++
T Consensus 64 ~~~Dv~~ 70 (250)
T 3nyw_A 64 LPLDITD 70 (250)
T ss_dssp EECCTTC
T ss_pred EeccCCC
Confidence 6666654
No 78
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.02 E-value=0.08 Score=53.68 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=30.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
...+|.|||+|.+|..++++|+..|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789998854
No 79
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.98 E-value=0.045 Score=54.98 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.9
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
+.+++++|+|+||.|..++..|+..|++++++++.+.
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 6788999999999999999999999999999987654
No 80
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.95 E-value=0.071 Score=54.78 Aligned_cols=75 Identities=25% Similarity=0.327 Sum_probs=53.8
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC---CceEEE
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP---QMSITA 86 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np---~v~I~~ 86 (563)
...||.|+|+|.+|+.++..|+..|+ ++++++|. ...|++..+.-+.+..| .+++..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~-------------------~~~k~~g~a~DL~~~~~~~~~~~i~~ 68 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLEDALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC-------------------ChHHHHHHHhhHhhhhhhcCCcEEEE
Confidence 45789999999999999999999998 58999884 23466665566665543 333331
Q ss_pred eccCCCCCcchHhhcccccEEEEccCC
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+ +.+-++++|+||.+...
T Consensus 69 --~-------~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 69 --A-------EYSDAKDADLVVITAGA 86 (326)
T ss_dssp --C-------CGGGGTTCSEEEECCCC
T ss_pred --C-------cHHHhcCCCEEEECCCC
Confidence 1 12458899999997653
No 81
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.93 E-value=0.11 Score=52.24 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=27.9
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|++++|+|.|+ |+||..+++.|+..|. +++++|.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 35678999996 9999999999999995 6777764
No 82
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.93 E-value=0.042 Score=52.94 Aligned_cols=89 Identities=15% Similarity=0.072 Sum_probs=59.1
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.+.+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ .+. ++ +..+..+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~-------------------~~~~----~~~---~~--~~~i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK----VLR---SG--ANFVHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG-------------------GHHH----HHH---TT--CEEEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH-------------------HHHH----HHh---cC--CeEEEcC
Confidence 35689999999999999999998887 88887432 1111 122 23 3344555
Q ss_pred CCCCcc-hHhhcccccEEEEccCCHHHHHHHHHHHHhcCC
Q 008516 91 VKDPKF-NVEFFKQFNVVLNGLDNLDARRHVNRLCLAADV 129 (563)
Q Consensus 91 i~~~~~-~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~ 129 (563)
.++... ...-++++|.||.++++.+.-..+...++..+.
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 543221 112367899999999987777777777777654
No 83
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.92 E-value=0.18 Score=50.90 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=60.9
Q ss_pred CHHHHHHHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCC
Q 008516 3 SERQLEAIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQ 81 (563)
Q Consensus 3 ~~~~q~kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~ 81 (563)
++.....+..++|+|.|+ |.||..+++.|...|. +++++|...-. ..+. +..+...
T Consensus 18 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~-------------------~~~~~~~ 74 (343)
T 2b69_A 18 YFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTG---RKRN-------------------VEHWIGH 74 (343)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---CGGG-------------------TGGGTTC
T ss_pred ccccccccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCcc---chhh-------------------hhhhccC
Confidence 445556778899999997 9999999999999995 67777643211 0000 0011111
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCC---------H--------HHHHHHHHHHHhcCCCEEEecccccee
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDN---------L--------DARRHVNRLCLAADVPLVESGTTGFLG 141 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn---------~--------~ar~~in~~c~~~~~pli~~gt~G~~G 141 (563)
.+++....++.+. .+.++|+||.+... . ..-..+-+.|...++.+|..++.+.+|
T Consensus 75 ~~~~~~~~D~~~~-----~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 75 ENFELINHDVVEP-----LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp TTEEEEECCTTSC-----CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred CceEEEeCccCCh-----hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 2344455555332 25678999986421 1 112334456666677788777666554
No 84
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.82 E-value=0.11 Score=52.89 Aligned_cols=118 Identities=15% Similarity=0.245 Sum_probs=67.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHH--hCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLAL--SGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal--~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
+..++|+|.| .|+||..+++.|+. .|. +++++|...-... .... ..+.+++.. .. +...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-~~~~---~~~~~~~~~---------~~-~~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTL-FSNN---RPSSLGHFK---------NL-IGFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCGG---------GG-TTCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccc-cccc---chhhhhhhh---------hc-cccCceE
Confidence 5678999997 59999999999999 675 6777775332000 0000 001111110 11 1223455
Q ss_pred eccCCCCCcchHhh-cccccEEEEccC-------C--------HHHHHHHHHHHHhcCCCEEEeccccceee
Q 008516 87 HHANVKDPKFNVEF-FKQFNVVLNGLD-------N--------LDARRHVNRLCLAADVPLVESGTTGFLGQ 142 (563)
Q Consensus 87 ~~~~i~~~~~~~~~-~~~~dvVi~alD-------n--------~~ar~~in~~c~~~~~pli~~gt~G~~G~ 142 (563)
+..++++...-... ..++|+||++.. + ...-..+-+.|.+.+.++|..++.+.+|.
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~ 144 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGN 144 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCS
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCC
Confidence 56666543222333 678888888532 1 12224556677777777888887766653
No 85
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.77 E-value=0.041 Score=58.99 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=29.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~ 35 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRT 35 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECC
Confidence 45789999999999999999999995 58888744
No 86
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=94.76 E-value=0.11 Score=51.20 Aligned_cols=82 Identities=12% Similarity=0.225 Sum_probs=53.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+++.....++..+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV-------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh-------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 46778899997 68999999999999996 577776431 2344455555555444566666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|+||++
T Consensus 89 ~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~ 118 (279)
T 1xg5_A 89 RCDLSNEEDILSMFSAIRSQHSGVDICINN 118 (279)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred EecCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 66665432212222 356777774
No 87
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.73 E-value=0.056 Score=52.87 Aligned_cols=64 Identities=28% Similarity=0.411 Sum_probs=45.2
Q ss_pred HHcCCcEEEECC-c-HHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 9 AIKGAKVLMVGA-G-GIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 9 kL~~~~VlvvGa-G-giG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
.+++++++|.|+ | |||.++++.|+..|. ++.++|.+ ..+.+.+.+.+++.. ..++..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~-~~~~~~ 77 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYH-------------------ERRLGETRDQLADLG-LGRVEA 77 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHTTC-SSCEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCC-------------------HHHHHHHHHHHHhcC-CCceEE
Confidence 367889999998 7 899999999999997 57777643 234444555554443 346666
Q ss_pred eccCCCC
Q 008516 87 HHANVKD 93 (563)
Q Consensus 87 ~~~~i~~ 93 (563)
+..++++
T Consensus 78 ~~~Dl~~ 84 (266)
T 3o38_A 78 VVCDVTS 84 (266)
T ss_dssp EECCTTC
T ss_pred EEeCCCC
Confidence 7767654
No 88
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.73 E-value=0.091 Score=51.46 Aligned_cols=82 Identities=21% Similarity=0.359 Sum_probs=54.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+.+..+..++..+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSS-------------------EGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Confidence 46778899998 68999999999999996 577776321 2344455556555555567777
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|+||++
T Consensus 70 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 99 (267)
T 1iy8_A 70 VADVSDEAQVEAYVTATTERFGRIDGFFNN 99 (267)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 77775432222222 356777774
No 89
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=94.72 E-value=0.12 Score=51.39 Aligned_cols=99 Identities=21% Similarity=0.238 Sum_probs=58.3
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.|+ |+||..+++.|...| ++.+++...-. .. .. ..+ .++.+..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~~~~--~~--~~---------------------~~~--~~~~~~~Dl 52 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNLSSG--NE--EF---------------------VNE--AARLVKADL 52 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCCSSC--CG--GG---------------------SCT--TEEEECCCT
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcCCCC--Ch--hh---------------------cCC--CcEEEECcC
Confidence 47999995 999999999999998 45554421110 00 00 011 244555666
Q ss_pred CCCcchHhhcccccEEEEccC-----------------CHHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 92 KDPKFNVEFFKQFNVVLNGLD-----------------NLDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alD-----------------n~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
.+ ..-.+.+++.|+||.+.. |...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 53 ~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 53 AA-DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG 119 (313)
T ss_dssp TT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred Ch-HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence 54 333566778898887532 12222334455666665 678877776655
No 90
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=94.70 E-value=0.074 Score=52.26 Aligned_cols=81 Identities=16% Similarity=0.313 Sum_probs=57.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+.+.+....+...+..+.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEEe
Confidence 5667888888 58999999999999997 57777632 245556667777777777888877
Q ss_pred cCCCCCcchHhh---cccccEEEEc
Q 008516 89 ANVKDPKFNVEF---FKQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~---~~~~dvVi~a 110 (563)
.++++...-.++ +.+.|++|++
T Consensus 68 ~D~~~~~~~~~~~~~~g~id~lv~n 92 (267)
T 3t4x_A 68 ADLGTEQGCQDVIEKYPKVDILINN 92 (267)
T ss_dssp CCTTSHHHHHHHHHHCCCCSEEEEC
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 777543222222 3467888875
No 91
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.66 E-value=0.041 Score=56.35 Aligned_cols=153 Identities=18% Similarity=0.273 Sum_probs=81.6
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHh-------h--CCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLK-------F--RPQ 81 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~-------~--np~ 81 (563)
.-.+|.|||+|.+|+.++..|+..|. +++++|.+. .+.+.+.+.+++ . -+.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~-------------------~~~~~~~~~i~~~l~~l~~~G~~~g 64 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP-------------------RQITGALENIRKEMKSLQQSGSLKG 64 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH-------------------HHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHHHHHHHHHcCcccc
Confidence 34689999999999999999999998 688887543 122222222111 0 011
Q ss_pred c--------eEEEeccCCCCCcchHhhcccccEEEEccCC-HHHHHH-HHHHHHh--cCCCEEEecccccee-eEEEEeC
Q 008516 82 M--------SITAHHANVKDPKFNVEFFKQFNVVLNGLDN-LDARRH-VNRLCLA--ADVPLVESGTTGFLG-QVTVHVK 148 (563)
Q Consensus 82 v--------~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn-~~ar~~-in~~c~~--~~~pli~~gt~G~~G-~v~v~~~ 148 (563)
. ++.... ...+.++++|+||.|+-. ...... +.++... .+. +|-+.+.|..- .+.-..+
T Consensus 65 ~~~~~~~~~~i~~~~-------~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~-Ii~s~tS~i~~~~la~~~~ 136 (319)
T 2dpo_A 65 SLSAEEQLSLISSCT-------NLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRV-VLSSSSSCLLPSKLFTGLA 136 (319)
T ss_dssp SSCHHHHHHTEEEEC-------CHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSS-EEEECCSSCCHHHHHTTCT
T ss_pred ccchHHHhhceEEeC-------CHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCe-EEEEeCCChHHHHHHHhcC
Confidence 0 121111 123567899999999854 444333 3333221 222 44333333221 0000011
Q ss_pred CCCccccccCCCCCCCCCceeeccCCCCchhHHHHHHHHHHHHH
Q 008516 149 GKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKL 192 (563)
Q Consensus 149 ~~t~Cy~C~~~~~~~~~p~cti~~~p~~~~hci~~a~~~lf~~l 192 (563)
....+...++-.++...|..++...+......+..+++ +++.+
T Consensus 137 ~~~r~ig~Hp~~P~~~~~lveiv~g~~t~~e~~~~~~~-l~~~l 179 (319)
T 2dpo_A 137 HVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHA-LMRKI 179 (319)
T ss_dssp TGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHH-HHHHT
T ss_pred CCCCeEEeecCCchhhcceEEEeCCCCCCHHHHHHHHH-HHHHc
Confidence 11223333333333345677777777777888999998 56654
No 92
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.64 E-value=0.13 Score=52.25 Aligned_cols=41 Identities=22% Similarity=0.270 Sum_probs=33.3
Q ss_pred CCCHHHHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 1 MVSERQLEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 1 ~~~~~~q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
|++. +.+++++|+|.| .|+||..+++.|...|. +++++|.+
T Consensus 1 mi~~---~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 1 MINN---SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp -CCH---HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCc---hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 5555 457889999999 59999999999999996 68887753
No 93
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.63 E-value=0.12 Score=53.32 Aligned_cols=108 Identities=14% Similarity=0.180 Sum_probs=62.9
Q ss_pred HHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+++.++|+|.|+ |.||..+++.|...|..+++++|...-.. ...+- ..-+++.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~l~---------------------~~~~v~~~ 83 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE----KINVP---------------------DHPAVRFS 83 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC----GGGSC---------------------CCTTEEEE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc----hhhcc---------------------CCCceEEE
Confidence 466788999995 99999999999999944788776432110 00000 01245556
Q ss_pred ccCCCCCcchHhhcccccEEEEccCCH-----------------HHHHHHHHHHHhc-CC-CEEEecccccee
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDNL-----------------DARRHVNRLCLAA-DV-PLVESGTTGFLG 141 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn~-----------------~ar~~in~~c~~~-~~-pli~~gt~G~~G 141 (563)
..++.+...-.+.++++|+||.+.... ..-..+-+.|... ++ .+|..++.+.+|
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIA 156 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcC
Confidence 666654332345677899999864321 1123344556665 54 677777665544
No 94
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.61 E-value=0.087 Score=51.69 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=55.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
|++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+..+..++..+.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD-------------------GERLRAAESALRQRFPGARLFASV 65 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEEe
Confidence 5678899998 68999999999999997 57777643 245566666676666666677777
Q ss_pred cCCCCCcchHhh-------cccccEEEEc
Q 008516 89 ANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
.++++...-..+ +.+.|++|++
T Consensus 66 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 94 (265)
T 3lf2_A 66 CDVLDALQVRAFAEACERTLGCASILVNN 94 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCSEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 777543221222 2355776664
No 95
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.55 E-value=0.19 Score=48.95 Aligned_cols=109 Identities=18% Similarity=0.226 Sum_probs=58.9
Q ss_pred HHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 7 LEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 7 q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
...+..++|.|||+|.+|..++++|+..|. ++++.|.+.=. .+.+. .....+.... +.+.+..+....
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~--~~~~~---~~~~~~~~~~----~~~~~~~~~~~~-- 81 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA--TLARA---EPDAMGAPPF----SQWLPEHPHVHL-- 81 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHTCC----------CCH----HHHGGGSTTCEE--
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh--hhhhh---hhhhhcchhh----hHHHhhcCceec--
Confidence 457889999999999999999999999996 68888754311 00000 0001111111 111111222111
Q ss_pred eccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHH-H-HhcCCCEEEec
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRL-C-LAADVPLVESG 135 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~-c-~~~~~pli~~g 135 (563)
....+..++.|+||.++-....+..+.+. . ...+..+|+.+
T Consensus 82 --------~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 82 --------AAFADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp --------EEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred --------cCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence 11345678899999999877666665543 1 11445555554
No 96
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=94.53 E-value=0.16 Score=49.21 Aligned_cols=80 Identities=24% Similarity=0.446 Sum_probs=52.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|...+.++|.+. + + + ..+.+.+..+..++..+.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~---------------~----~-~-~~~~l~~~~~~~~~~~~~ 61 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE---------------N----P-T-ALAELKAINPKVNITFHT 61 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC---------------C----H-H-HHHHHHHHCTTSEEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc---------------h----H-H-HHHHHHHhCCCceEEEEE
Confidence 4678899998 689999999999999987688876431 0 1 1 123344455566777777
Q ss_pred cCCCCC-cchHhhc-------ccccEEEEc
Q 008516 89 ANVKDP-KFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~-~~~~~~~-------~~~dvVi~a 110 (563)
.++++. ..-.+++ .+.|+||++
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~g~id~lv~~ 91 (254)
T 1sby_A 62 YDVTVPVAESKKLLKKIFDQLKTVDILING 91 (254)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EecCCChHHHHHHHHHHHHhcCCCCEEEEC
Confidence 777643 2222222 367888885
No 97
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.48 E-value=0.11 Score=52.15 Aligned_cols=110 Identities=23% Similarity=0.271 Sum_probs=63.3
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
.+++|+|.| .|+||..+++.|+..|. +++++|.+.-. .. ...+.+.+.. ..+++.+..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~---------------~~----~~~~~~~~~~-~~~~~~~~~ 62 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNS---------------KR----EAIARIEKIT-GKTPAFHET 62 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSS---------------CT----HHHHHHHHHH-SCCCEEECC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcc---------------hH----HHHHHHHhhc-CCCceEEEe
Confidence 356899998 59999999999999996 57776632210 00 1112222221 123455566
Q ss_pred CCCCCcchHhhcc--cccEEEEccC-----------------CHHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 90 NVKDPKFNVEFFK--QFNVVLNGLD-----------------NLDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 90 ~i~~~~~~~~~~~--~~dvVi~alD-----------------n~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
++++...-.+.++ +.|+||++.. |...-..+-+.|++.+. .+|..++.+.+|
T Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred ecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 6654433344555 7888888542 12222344455666664 577776655544
No 98
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.41 E-value=0.15 Score=51.84 Aligned_cols=72 Identities=18% Similarity=0.316 Sum_probs=49.6
Q ss_pred cEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHh----hCCCceEEEecc
Q 008516 14 KVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLK----FRPQMSITAHHA 89 (563)
Q Consensus 14 ~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~----~np~v~I~~~~~ 89 (563)
||.|+|+|.+|..++-.|+..|++++.++|.+. .|++..+..+.+ .+..++|.+..+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 689999999999999999999996699998441 223322233332 344566665421
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.+-++++|+||.+..
T Consensus 62 --------~~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 62 --------YEDMRGSDIVLVTAG 76 (308)
T ss_dssp --------GGGGTTCSEEEECCS
T ss_pred --------HHHhCCCCEEEEeCC
Confidence 134789999999854
No 99
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.41 E-value=0.091 Score=53.97 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC----CceEEE
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP----QMSITA 86 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np----~v~I~~ 86 (563)
..||.|+|+|.+|+.++..|+..|. ++++++|.+ ..|++..+.-+++..| .+++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~- 64 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTS- 64 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEE-
Confidence 4689999999999999999999997 589998832 3456655555554433 33332
Q ss_pred eccCCCCCcchHhhcccccEEEEccC
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.+. .+-++++|+||.+..
T Consensus 65 -~~~-------~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 65 -YGT-------YEDCKDADIVCICAG 82 (326)
T ss_dssp -EEC-------GGGGTTCSEEEECCS
T ss_pred -eCc-------HHHhCCCCEEEEecc
Confidence 211 245789999999764
No 100
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.37 E-value=0.046 Score=58.01 Aligned_cols=90 Identities=17% Similarity=0.236 Sum_probs=62.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
+.+|+|+|+|.+|..+++.|...|+ .+++||.|.- +++. +++. + +..+.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v~~----~~~~--g--~~vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HIET----LRKF--G--MKVFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HHHH----HHHT--T--CCCEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HHHH----HHhC--C--CeEEEcCC
Confidence 4689999999999999999999997 6899986632 2222 2222 2 23344555
Q ss_pred CCCcchH-hhcccccEEEEccCCHHHHHHHHHHHHhcCC
Q 008516 92 KDPKFNV-EFFKQFNVVLNGLDNLDARRHVNRLCLAADV 129 (563)
Q Consensus 92 ~~~~~~~-~~~~~~dvVi~alDn~~ar~~in~~c~~~~~ 129 (563)
++...-. .-+.++|+||.++++.+.-..+-..++..+.
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 4322111 2257899999999998888888888877654
No 101
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=94.36 E-value=0.18 Score=50.89 Aligned_cols=37 Identities=27% Similarity=0.301 Sum_probs=28.8
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+..++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 54 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNF 54 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 356678999998 69999999999999994 78888754
No 102
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.34 E-value=0.15 Score=52.50 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=28.8
Q ss_pred cCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 3468999997 9999999999999995 78888754
No 103
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=94.34 E-value=0.069 Score=51.48 Aligned_cols=42 Identities=29% Similarity=0.537 Sum_probs=32.4
Q ss_pred CCCHHHHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 1 MVSERQLEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 1 ~~~~~~q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|.+.+.. ++.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 1 m~~~~~~-~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 1 MFNSDNL-RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CCCGGGG-CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCccCC-CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4444432 36788899998 58999999999999996 6777763
No 104
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.32 E-value=0.14 Score=47.82 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=58.0
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
+||+|.|+ |+||..+++.|+..|. ++++++.+. .+.. .+.+.+ +.+..++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~-------~~~~~~--~~~~~D~ 51 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GKIT-------QTHKDI--NILQKDI 51 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HHHH-------HHCSSS--EEEECCG
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hhhh-------hccCCC--eEEeccc
Confidence 47999995 9999999999999995 677776431 1211 111333 4455566
Q ss_pred CCCcchHhhcccccEEEEccCC--------HHHHHHHHHHHHhcC-CCEEEeccc
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDN--------LDARRHVNRLCLAAD-VPLVESGTT 137 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn--------~~ar~~in~~c~~~~-~pli~~gt~ 137 (563)
++... +.+.++|+||++... ...-..+-+.|++.+ ..+|..++.
T Consensus 52 ~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 52 FDLTL--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp GGCCH--HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred cChhh--hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 44332 667899999997532 233344555565553 345555443
No 105
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.29 E-value=0.039 Score=59.33 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=65.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.+||+|+|+|.+|..+++.|...|. .+++||.|.=. . +.+.+. ..+..+.++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~~-------------------~----~~~~~~---~~~~~i~Gd~ 55 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN-DITIVDKDGDR-------------------L----RELQDK---YDLRVVNGHA 55 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHHH-------------------H----HHHHHH---SSCEEEESCT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHH-------------------H----HHHHHh---cCcEEEEEcC
Confidence 4689999999999999999998885 69999966421 1 122211 1234455555
Q ss_pred CCCc-chHhhcccccEEEEccCCHHHHHHHHHHHHhc-CCCEEEec
Q 008516 92 KDPK-FNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA-DVPLVESG 135 (563)
Q Consensus 92 ~~~~-~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~-~~pli~~g 135 (563)
++.. ....-.+++|++|.++++.+.-..+..+++.. +.|-+-+.
T Consensus 56 ~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 56 SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEE
T ss_pred CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCccceeE
Confidence 4322 22334688999999999988877777777763 66655443
No 106
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.21 E-value=0.25 Score=48.42 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=60.5
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.|+ |.+|..+++.|...+-.++++++.+.-....+ ..+ .++.+..++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~--~v~~~~~D~ 53 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRG--KVSVRQLDY 53 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBT--TBEEEECCT
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhC--CCEEEEcCC
Confidence 47999995 99999999999987334677766443111100 012 344555666
Q ss_pred CCCcchHhhcccccEEEEccCC-------HHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDN-------LDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn-------~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
++...-.+.++++|+||++... ...-..+-+.|.+.++ .+|..++.|
T Consensus 54 ~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 54 FNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp TCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 5443335567899999986532 2333455566777775 466666543
No 107
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.17 E-value=0.083 Score=51.76 Aligned_cols=96 Identities=11% Similarity=0.116 Sum_probs=60.2
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.| .|+||.++++.|+..|. ++.++|.+..... ..+++.+..+
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~------------------------------~~~~~~~~~D 51 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA------------------------------GPNEECVQCD 51 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC------------------------------CTTEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc------------------------------CCCCEEEEcC
Confidence 35789998 69999999999999985 6778775432111 1245556666
Q ss_pred CCCCcchHhhcccccEEEEcc-----CC--------HHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGL-----DN--------LDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~al-----Dn--------~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
+++...-..++++.|+||++. ++ ...-..+-+.|++.+. .+|..++..
T Consensus 52 l~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~ 113 (267)
T 3rft_A 52 LADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113 (267)
T ss_dssp TTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchH
Confidence 654433345667788888752 22 1222345566666664 566665543
No 108
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=94.17 E-value=0.14 Score=51.72 Aligned_cols=115 Identities=23% Similarity=0.198 Sum_probs=63.3
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.| .|+||..+++.|+..|. +++++|...-...+. .-...+. +.+.+.. ..+++.+..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~---------~~~~~~~----~~l~~~~-~~~~~~~~~D 66 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGG---------GSLPESL----RRVQELT-GRSVEFEEMD 66 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCS---------SSSBHHH----HHHHHHH-TCCCEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccc---------cccHHHH----HHHHhcc-CCceEEEECC
Confidence 46899998 59999999999999995 677776432111110 0011111 1222211 1234555566
Q ss_pred CCCCcchHhhcc--cccEEEEccCC-----------------HHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 91 VKDPKFNVEFFK--QFNVVLNGLDN-----------------LDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 91 i~~~~~~~~~~~--~~dvVi~alDn-----------------~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
+++...-.+.++ ++|+||++... ...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 67 ~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 67 ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp TTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 654332234555 78999986431 1112334455666664 577766655544
No 109
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.16 E-value=0.11 Score=51.79 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=27.3
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++|+|.|+ |+||..+++.|+..|. +++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEcc
Confidence 578999996 9999999999999994 6887774
No 110
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=94.16 E-value=0.13 Score=52.29 Aligned_cols=37 Identities=32% Similarity=0.588 Sum_probs=28.3
Q ss_pred HHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+++|+|.|+ |.||..+++.|+..|..+++++|..
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 356689999997 9999999999999996678888754
No 111
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.15 E-value=0.16 Score=51.30 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=49.3
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC----CCceEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR----PQMSITAH 87 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n----p~v~I~~~ 87 (563)
+||.|+|+|.+|..++..|+..|.. +++++|.+. .|++..+..+.+.+ ...+|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEe
Confidence 4799999999999999999999974 899988432 23332222233322 34566553
Q ss_pred ccCCCCCcchHhhcccccEEEEccC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
.+ .+-++++|+||.+..
T Consensus 62 ~d--------~~a~~~aDiVViaag 78 (294)
T 1oju_A 62 AD--------YSLLKGSEIIVVTAG 78 (294)
T ss_dssp SC--------GGGGTTCSEEEECCC
T ss_pred CC--------HHHhCCCCEEEECCC
Confidence 21 345789999999864
No 112
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.13 E-value=0.37 Score=48.61 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=49.2
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC----CCceEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR----PQMSITAH 87 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n----p~v~I~~~ 87 (563)
.||.|+|+|.+|+.++..|+..|+ .+++++|.+ ..|++..+..+.+.+ ..+++..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~- 61 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN-------------------EAKVKADQIDFQDAMANLEAHGNIVI- 61 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHHHGGGSSSCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC-------------------HHHHHHHHHHHHhhhhhcCCCeEEEe-
Confidence 489999999999999999999997 678888743 224444443333222 1233321
Q ss_pred ccCCCCCcchHhhcccccEEEEccCCH
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDNL 114 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn~ 114 (563)
.+ .+-++++|+||.++-..
T Consensus 62 -~d-------~~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 62 -ND-------WAALADADVVISTLGNI 80 (309)
T ss_dssp -SC-------GGGGTTCSEEEECCSCG
T ss_pred -CC-------HHHhCCCCEEEEecCCc
Confidence 11 13468999999998653
No 113
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=94.12 E-value=0.18 Score=50.53 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=62.5
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
.+++|+|.| .|+||..+++.|+..|- -+++++|...-. .+..+ +.++...-+++.+.
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~-~~~~~--------------------~~~~~~~~~~~~~~ 60 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYG-SNPAN--------------------LKDLEDDPRYTFVK 60 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT-CCGGG--------------------GTTTTTCTTEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCccc-CchhH--------------------HhhhccCCceEEEE
Confidence 456899999 59999999999999984 368877754210 01000 00111112455556
Q ss_pred cCCCCCcchHhhcccccEEEEccCC-----------------HHHHHHHHHHHHhcC--CCEEEecccccee
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDN-----------------LDARRHVNRLCLAAD--VPLVESGTTGFLG 141 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn-----------------~~ar~~in~~c~~~~--~pli~~gt~G~~G 141 (563)
.++++...-.+.+.+.|+||++... ...-..+-+.|...+ ..+|..++.+.+|
T Consensus 61 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 61 GDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp CCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred cCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 6665433233455788999885421 112233445566554 3677777665544
No 114
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.06 E-value=0.21 Score=50.49 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=49.9
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHh----hCCCceEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLK----FRPQMSITAH 87 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~----~np~v~I~~~ 87 (563)
+||.|+|+|++|+.++-.|+..|. ++|.|+|- -+.|++.-+.-+.+ ++...++...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI-------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS-------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC-------------------CCCcchhhhhhhhcccccCCCCCeEecC
Confidence 489999999999999999999986 78999872 23345544444554 3333444432
Q ss_pred ccCCCCCcchHhhcccccEEEEccC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
. +.+-+++.|+||.+..
T Consensus 62 ~--------d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 62 A--------DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp S--------CGGGGTTCSEEEECCC
T ss_pred C--------CHHHhCCCCEEEEecC
Confidence 2 1234789999988643
No 115
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.06 E-value=0.17 Score=51.42 Aligned_cols=73 Identities=23% Similarity=0.306 Sum_probs=49.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC----CceEEE
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP----QMSITA 86 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np----~v~I~~ 86 (563)
..||.|+|+|.+|..++..|+..|. ++|.++|.+ ..|++..+..+.+..+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~-------------------~~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN-------------------ESKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------cchHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999885 679998843 1233333333333333 455542
Q ss_pred eccCCCCCcchHhhcccccEEEEccC
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+. .+-++++|+||.+..
T Consensus 67 --~~-------~~al~~aDvViia~~ 83 (316)
T 1ldn_A 67 --GD-------YDDCRDADLVVICAG 83 (316)
T ss_dssp --CC-------GGGTTTCSEEEECCS
T ss_pred --Cc-------HHHhCCCCEEEEcCC
Confidence 11 234789999999854
No 116
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.04 E-value=0.069 Score=53.40 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=29.4
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
+++++|+|+||.|..++..|+..| .+|+|++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~n 148 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLN 148 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 789999999999999999999999 8999975
No 117
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.04 E-value=0.14 Score=52.37 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=31.1
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+....||.|+|+|.+|..++..|+..|...++++|.|
T Consensus 10 ~~~~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 10 TVIMRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34455799999999999999999999999569999854
No 118
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.03 E-value=0.14 Score=49.56 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=52.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
++++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.+.. .++..+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 63 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADIN-------------------AEAAEAVAKQIVADG--GTAISV 63 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTT--CEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCC-------------------HHHHHHHHHHHHhcC--CcEEEE
Confidence 46788899998 58999999999999997 57777643 234555555555543 355666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|+||++
T Consensus 64 ~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 93 (253)
T 3qiv_A 64 AVDVSDPESAKAMADRTLAEFGGIDYLVNN 93 (253)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665432222222 366777774
No 119
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.03 E-value=0.24 Score=46.57 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=55.5
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.||+|+| +|.+|..+++.|+..|. +++++|.+. .+++.+++.+...-+...+.. .
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~--~-- 56 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRRE-------------------EKAEAKAAEYRRIAGDASITG--M-- 56 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSH-------------------HHHHHHHHHHHHHHSSCCEEE--E--
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHhccccccCCCCh--h--
Confidence 3799999 99999999999999996 688876431 122222222111101111221 1
Q ss_pred CCCcchHhhcccccEEEEccCCHHHHHHHHHHHH-hcCCCEEEec
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCL-AADVPLVESG 135 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~-~~~~pli~~g 135 (563)
...+.++++|+|+.++.....+..+.++.. ..+..+++..
T Consensus 57 ----~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~~ 97 (212)
T 1jay_A 57 ----KNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPL 97 (212)
T ss_dssp ----EHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred ----hHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCEEEEcC
Confidence 123457889999999976555555544321 1355555554
No 120
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.01 E-value=0.2 Score=50.86 Aligned_cols=34 Identities=21% Similarity=0.484 Sum_probs=30.6
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||.|+|+|.+|+.++..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999998679999854
No 121
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.98 E-value=0.098 Score=52.06 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=28.4
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 689999999999999999999996 68887744
No 122
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.97 E-value=0.042 Score=54.35 Aligned_cols=35 Identities=31% Similarity=0.577 Sum_probs=31.8
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+ +++|+|+||.|..++..|...|+++|+++|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 356 99999999999999999999999999998754
No 123
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.94 E-value=0.14 Score=50.66 Aligned_cols=84 Identities=18% Similarity=0.255 Sum_probs=48.9
Q ss_pred HHHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCce
Q 008516 5 RQLEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMS 83 (563)
Q Consensus 5 ~~q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~ 83 (563)
+.+..+++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.++... .+
T Consensus 17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~--~~ 74 (279)
T 3sju_A 17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARD-------------------AKNVSAAVDGLRAAG--HD 74 (279)
T ss_dssp --------CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHTTT--CC
T ss_pred CcccccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcC--Cc
Confidence 344556778899998 68999999999999997 47777643 234555556665543 34
Q ss_pred EEEeccCCCCCcchHhh-------cccccEEEEc
Q 008516 84 ITAHHANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 84 I~~~~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
+..+..++++...-.++ +.+.|+||++
T Consensus 75 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 108 (279)
T 3sju_A 75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNS 108 (279)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 55566666543211222 2356777764
No 124
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.90 E-value=0.16 Score=50.23 Aligned_cols=81 Identities=21% Similarity=0.329 Sum_probs=51.0
Q ss_pred HHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+. .+.+.+++.+.+.. ..++..+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~ 83 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSK-------------------ETLQKVVSHCLELG-AASAHYI 83 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHT-CSEEEEE
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHHHHHHHHhC-CCceEEE
Confidence 467788999985 8999999999999996 688876431 23344444454443 2356666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|+||++
T Consensus 84 ~~Dl~d~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665432212222 356777764
No 125
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.86 E-value=0.2 Score=51.06 Aligned_cols=37 Identities=32% Similarity=0.650 Sum_probs=31.3
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
+++..||.|+|+|.+|..++-.|+..|. .+|.++|-+
T Consensus 3 ~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 3 KFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3456799999999999999999999886 679998843
No 126
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=93.85 E-value=0.2 Score=50.49 Aligned_cols=75 Identities=20% Similarity=0.308 Sum_probs=48.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCC------CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCc
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGF------QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQM 82 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gv------g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v 82 (563)
+..++|+|.| .|+||..+++.|+..|. .+++++|.+.-. .. . ....
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~---~~--------~----------------~~~~ 64 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPE---AP--------A----------------GFSG 64 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCC---CC--------T----------------TCCS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCc---cc--------c----------------ccCC
Confidence 4567899999 69999999999999983 478887754211 00 0 0123
Q ss_pred eEEEeccCCCCCcchHhhc-ccccEEEEcc
Q 008516 83 SITAHHANVKDPKFNVEFF-KQFNVVLNGL 111 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~-~~~dvVi~al 111 (563)
+++.+..++++...-.+.+ .+.|+||++.
T Consensus 65 ~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A 94 (342)
T 2hrz_A 65 AVDARAADLSAPGEAEKLVEARPDVIFHLA 94 (342)
T ss_dssp EEEEEECCTTSTTHHHHHHHTCCSEEEECC
T ss_pred ceeEEEcCCCCHHHHHHHHhcCCCEEEECC
Confidence 5566666665543333455 4789998854
No 127
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=93.84 E-value=0.16 Score=50.15 Aligned_cols=66 Identities=17% Similarity=0.249 Sum_probs=45.4
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC-CceEE
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP-QMSIT 85 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np-~v~I~ 85 (563)
-.+.+++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+++..+ ..++.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 66 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRN-------------------PDKLAGAVQELEALGANGGAIR 66 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHTTCCSSCEEE
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhCCCCceEE
Confidence 356788899998 68999999999999997 57777743 2344555555655433 22566
Q ss_pred EeccCCCC
Q 008516 86 AHHANVKD 93 (563)
Q Consensus 86 ~~~~~i~~ 93 (563)
.+..++++
T Consensus 67 ~~~~Dv~~ 74 (281)
T 3svt_A 67 YEPTDITN 74 (281)
T ss_dssp EEECCTTS
T ss_pred EEeCCCCC
Confidence 66666654
No 128
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.83 E-value=0.22 Score=49.30 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=29.6
Q ss_pred HHcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 9 AIKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 9 kL~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.++.++|+|.|+ |.+|..+++.|...|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 456789999997 9999999999999996 677777554
No 129
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.83 E-value=0.25 Score=49.59 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=62.5
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.| .|+||..+++.|+..|. +++++|... |. ......+.+.. .+ +++.+..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------~~-----------~~~~~~~~l~~-~~--~~~~~~~Dl 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLS-------RK-----------GATDNLHWLSS-LG--NFEFVHGDI 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC-------ST-----------THHHHHHHHHT-TC--CCEEEECCT
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCC-------cc-----------Cchhhhhhhcc-CC--ceEEEEcCC
Confidence 4799999 69999999999999995 677776321 10 01111122322 12 344555666
Q ss_pred CCCcchHhhccc--ccEEEEccCC---------H--------HHHHHHHHHHHhcCCC--EEEecccccee
Q 008516 92 KDPKFNVEFFKQ--FNVVLNGLDN---------L--------DARRHVNRLCLAADVP--LVESGTTGFLG 141 (563)
Q Consensus 92 ~~~~~~~~~~~~--~dvVi~alDn---------~--------~ar~~in~~c~~~~~p--li~~gt~G~~G 141 (563)
++...-.+.+++ +|+||++... . ..-..+-+.|...++. +|..++.+.+|
T Consensus 60 ~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 543323455666 8999986431 1 1123445566666654 77777665544
No 130
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.80 E-value=0.16 Score=51.89 Aligned_cols=167 Identities=15% Similarity=0.228 Sum_probs=90.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCceEEEec
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~I~~~~ 88 (563)
..+|.|||+|-+|+-++-.++..|+ .++++|.+.= .+.+ +..+.....+.+.+.. +....+..-
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~---~l~~---------~~~~i~~~l~~~~~~g~~~~~~~~~~~l 72 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPR---QITG---------ALENIRKEMKSLQQSGSLKGSLSAEEQL 72 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHH---HHHH---------HHHHHHHHHHHHHHTTCCCSSSCHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHH---HHHH---------HHHHHHHHHHHHHHcCCCCCccCHHHHH
Confidence 4589999999999999999999998 5889885431 1110 0011110111111110 000000000
Q ss_pred cCCCCCcchHhhcccccEEEEcc-CCHHHHHHHHHHHHhcCC--CEEEeccccceee-EEEEeCCCCccccccCCCCCCC
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGL-DNLDARRHVNRLCLAADV--PLVESGTTGFLGQ-VTVHVKGKTECYECQPKPAPKT 164 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~al-Dn~~ar~~in~~c~~~~~--pli~~gt~G~~G~-v~v~~~~~t~Cy~C~~~~~~~~ 164 (563)
.+++....-.+.++++|+|+-|. .+.+..+.+-+..-..-. .++.+.|++..=. +.-...+..-|...++-.++.-
T Consensus 73 ~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~ 152 (319)
T 3ado_A 73 SLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYY 152 (319)
T ss_dssp HTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTT
T ss_pred hhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccc
Confidence 11110011134588999999986 677777666554433322 4677777764310 0000122223334444445556
Q ss_pred CCceeeccCCCCchhHHHHHHHHHHHHH
Q 008516 165 YPVCTITSTPSKFVHCIVWAKDLLFAKL 192 (563)
Q Consensus 165 ~p~cti~~~p~~~~hci~~a~~~lf~~l 192 (563)
-|.-.|...+.+....+..+.+ +...+
T Consensus 153 m~LVEiv~g~~Ts~~~~~~~~~-~~~~~ 179 (319)
T 3ado_A 153 IPLVELVPHPETSPATVDRTHA-LMRKI 179 (319)
T ss_dssp CCEEEEEECTTCCHHHHHHHHH-HHHHT
T ss_pred cchHHhcCCCCCcHHHHHHHHH-HHHHh
Confidence 6888888888888888998887 45543
No 131
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.76 E-value=0.2 Score=48.85 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=28.6
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567899998 68999999999999997 6777764
No 132
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.75 E-value=0.19 Score=49.52 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=53.0
Q ss_pred CcEEEECC-cHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.||.|+|+ |.+|..+++.+... |+.-+-++|.+ .+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-------------------------------------------~d 37 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-------------------------------------------DP 37 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-------------------------------------------CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-------------------------------------------CC
Confidence 37999997 99999999998865 66444466532 01
Q ss_pred CCCCcchHhhc-ccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccce
Q 008516 91 VKDPKFNVEFF-KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFL 140 (563)
Q Consensus 91 i~~~~~~~~~~-~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~~ 140 (563)
+ .+.+ .+.|+||+.+. +++-...-+.|.++++|+|-+- .|+.
T Consensus 38 l------~~~~~~~~DvvIDfT~-p~a~~~~~~~a~~~g~~~VigT-TG~~ 80 (245)
T 1p9l_A 38 L------SLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGT-TGFT 80 (245)
T ss_dssp T------HHHHHTTCCEEEECSC-TTTHHHHHHHHHHTTCEEEECC-CCCC
T ss_pred H------HHHhccCCcEEEEccC-hHHHHHHHHHHHHcCCCEEEcC-CCCC
Confidence 1 1223 37899999885 4555556678899999987663 4543
No 133
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.71 E-value=0.1 Score=52.17 Aligned_cols=32 Identities=19% Similarity=0.540 Sum_probs=28.4
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.||.|||+|.+|..++++|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 68887643
No 134
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.69 E-value=0.32 Score=48.68 Aligned_cols=102 Identities=19% Similarity=0.274 Sum_probs=61.5
Q ss_pred CcEEEECC-cHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
++|+|.|+ |.||..+++.|... |. +++++|...- .+.+ +...-+++.+..+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~---~~~~-----------------------~~~~~~~~~~~~D 53 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSD---AISR-----------------------FLNHPHFHFVEGD 53 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCG---GGGG-----------------------GTTCTTEEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcc---hHHH-----------------------hhcCCCeEEEecc
Confidence 47999996 99999999999998 64 6777775321 1100 0001235555666
Q ss_pred CCCC-cchHhhcccccEEEEccC--CH-------H--------HHHHHHHHHHhcCCCEEEecccccee
Q 008516 91 VKDP-KFNVEFFKQFNVVLNGLD--NL-------D--------ARRHVNRLCLAADVPLVESGTTGFLG 141 (563)
Q Consensus 91 i~~~-~~~~~~~~~~dvVi~alD--n~-------~--------ar~~in~~c~~~~~pli~~gt~G~~G 141 (563)
+++. ..-.+.++++|+||.+.. .. . .-..+-+.|...+..+|..++.+.+|
T Consensus 54 ~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g 122 (345)
T 2bll_A 54 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 122 (345)
T ss_dssp TTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred ccCcHHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcC
Confidence 6542 222345678899998522 11 1 12234456666667788877766555
No 135
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.60 E-value=0.23 Score=50.15 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=48.0
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCceEEEec
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMSITAHH 88 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~I~~~~ 88 (563)
.||.|+|+|.+|..++..|+..|. ++++++|.+. .|++..+..+.+.. +..++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~-- 59 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH-- 59 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--
Confidence 489999999999999999999985 5799998542 23332233333332 2344443
Q ss_pred cCCCCCcchHhhcccccEEEEccCC
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
. +.+-++++|+||.+...
T Consensus 60 ~-------~~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 60 G-------GHSELADAQVVILTAGA 77 (304)
T ss_dssp E-------CGGGGTTCSEEEECC--
T ss_pred C-------CHHHhCCCCEEEEcCCC
Confidence 1 12347899999999753
No 136
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.57 E-value=0.33 Score=49.29 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=60.9
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
...+|.|||+|.+|..++++|+..|.-+++++|.+.-. . .|++...+.+.+. ++ . ...
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~--------------~--~~~~~~~~~~~~~--g~---~-~~s 80 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFND--------------P--AASGALRARAAEL--GV---E-PLD 80 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGC--------------T--TTHHHHHHHHHHT--TC---E-EES
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCcc--------------c--cchHHHHHHHHHC--CC---C-CCC
Confidence 35789999999999999999999994478888754310 0 1233333333332 22 0 001
Q ss_pred CCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHh--cCCCEEEecc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLA--ADVPLVESGT 136 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~gt 136 (563)
..+..++.|+||.++-.......+.++... .+..+|+.++
T Consensus 81 ------~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st 122 (317)
T 4ezb_A 81 ------DVAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNS 122 (317)
T ss_dssp ------SGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCS
T ss_pred ------HHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCC
Confidence 235577899999998777666666554322 3445666554
No 137
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.52 E-value=0.16 Score=49.65 Aligned_cols=80 Identities=16% Similarity=0.261 Sum_probs=51.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+.+.+++.. ..++..+.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~-~~~~~~~~ 66 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRST-------------------ADIDACVADLDQLG-SGKVIGVQ 66 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHTTS-SSCEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhC-CCcEEEEE
Confidence 5678888887 68999999999999997 688877432 34455555555443 23566666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-..++ .+.|++|++
T Consensus 67 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 95 (262)
T 3pk0_A 67 TDVSDRAQCDALAGRAVEEFGGIDVVCAN 95 (262)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 6665432222222 356777764
No 138
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.50 E-value=0.21 Score=49.03 Aligned_cols=33 Identities=30% Similarity=0.610 Sum_probs=29.7
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++ +|+|+|+|++|..+++.|...|+ +++++|.
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r 147 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNR 147 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 466 99999999999999999999998 8988763
No 139
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.48 E-value=0.22 Score=51.70 Aligned_cols=36 Identities=19% Similarity=0.557 Sum_probs=30.3
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
++..+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCH
Confidence 456899999999999999999999995 688887653
No 140
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=93.45 E-value=0.21 Score=47.90 Aligned_cols=37 Identities=30% Similarity=0.531 Sum_probs=30.8
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 357788899998 58999999999999997 58887743
No 141
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.44 E-value=0.15 Score=51.15 Aligned_cols=32 Identities=34% Similarity=0.636 Sum_probs=28.7
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+|.||| +|.+|..+++.|+..|. +++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 4899999 99999999999999997 68888754
No 142
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.42 E-value=0.59 Score=46.04 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=59.8
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCc--hHHHHHHHHHHhhCCCceEEEec
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQ--SKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk--~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
.++|+|.|+ |++|..+++.|+..|. ++++++.+.- .-.. .|++.+. .+. .+++ +.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--------------~~~~~~~~~~~~~-~l~--~~~v--~~v~ 61 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTI--------------TAANPETKEELID-NYQ--SLGV--ILLE 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSC--------------CSSCHHHHHHHHH-HHH--HTTC--EEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCc--------------ccCChHHHHHHHH-HHH--hCCC--EEEE
Confidence 468999996 9999999999999995 5777653310 0001 2333222 222 2333 4455
Q ss_pred cCCCCCcchHhhcccccEEEEccCC--HHHHHHHHHHHHhcC-CCE
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDN--LDARRHVNRLCLAAD-VPL 131 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn--~~ar~~in~~c~~~~-~pl 131 (563)
.++.+...-...+++.|+||++... ...-..+-+.|.+.+ ++.
T Consensus 62 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 107 (307)
T 2gas_A 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKK 107 (307)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSE
T ss_pred eCCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceE
Confidence 6665443335667899999997543 333344555666665 543
No 143
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.38 E-value=0.17 Score=49.33 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=29.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC---CeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF---QDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv---g~I~iiD~D 45 (563)
..+|.|||+|.+|+.+++.|+..|+ ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 4689999999999999999999995 578888754
No 144
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.34 E-value=0.28 Score=50.01 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=51.3
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCceEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMSITAH 87 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~I~~~ 87 (563)
..||.|+|+|.+|..++-.|+..|. .+|.++|- -..|++..+.-+.+.. +.+++.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~- 64 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS- 64 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE-
Confidence 3689999999999999999999885 57888873 2245554444444332 4455554
Q ss_pred ccCCCCCcchHhhcccccEEEEccCC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+. .+-++++|+||.+...
T Consensus 65 -~~-------~~a~~~aDvVii~ag~ 82 (318)
T 1ez4_A 65 -GE-------YSDCKDADLVVITAGA 82 (318)
T ss_dssp -CC-------GGGGTTCSEEEECCCC
T ss_pred -CC-------HHHhCCCCEEEECCCC
Confidence 11 2348899999998753
No 145
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.30 E-value=0.14 Score=51.82 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=53.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+ ..|.+.+.+.+....++.++..+.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR-------------------QDSIDKALATLEAEGSGPEVMGVQ 65 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCeEEEEE
Confidence 4567899998 58999999999999997 57777643 234555556666555555666666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-..++ .+.|+||++
T Consensus 66 ~Dl~~~~~v~~~~~~~~~~~g~id~lv~n 94 (319)
T 3ioy_A 66 LDVASREGFKMAADEVEARFGPVSILCNN 94 (319)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 6665432212222 355777774
No 146
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.29 E-value=0.34 Score=49.47 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=29.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||.|+|+|.+|..++..|+..|...+.++|.|
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 3589999999999999999999998559998844
No 147
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.28 E-value=0.26 Score=49.65 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=28.8
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...+|.|||+|.+|..++++|+..|. +++++|.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999997 5777763
No 148
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.25 E-value=0.21 Score=48.58 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=29.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSR 46 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46678888887 68999999999999997 6887764
No 149
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=93.24 E-value=0.42 Score=47.87 Aligned_cols=108 Identities=16% Similarity=0.290 Sum_probs=62.0
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHh---CC--CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 13 AKVLMVG-AGGIGCELLKTLALS---GF--QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~---Gv--g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
++|+|.| .|+||..+++.|+.. |+ .+++++|...-. .+. . .+..+...-+++.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~-~~~--~------------------~~~~~~~~~~~~~ 59 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA-GNR--A------------------NLAPVDADPRLRF 59 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTT-CCG--G------------------GGGGGTTCTTEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCcc-Cch--h------------------hhhhcccCCCeEE
Confidence 3799998 599999999999996 53 478887753210 000 0 0011111124555
Q ss_pred eccCCCCCcchHhhcccccEEEEccCC-----------------HHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDN-----------------LDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn-----------------~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
+..++++...-.+.+.++|+||.+... ...-..+-+.|...++ .+|..++.+.+|
T Consensus 60 ~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 60 VHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (337)
T ss_dssp EECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhC
Confidence 566665433233556788999886421 1122344556676665 677777665544
No 150
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.24 E-value=0.58 Score=46.25 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=60.7
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.|+ |.+|..+++.|...|. ++++++.+.- .-...|++.+. .+. .++ ++.+..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--------------~~~~~~~~~~~-~~~--~~~--~~~~~~D 63 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEV--------------VSNIDKVQMLL-YFK--QLG--AKLIEAS 63 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCC--------------SSCHHHHHHHH-HHH--TTT--CEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCc--------------ccchhHHHHHH-HHH--hCC--eEEEeCC
Confidence 468999995 9999999999999995 5777653210 00012332221 121 233 4445566
Q ss_pred CCCCcchHhhcccccEEEEccC------CHHHHHHHHHHHHhcC-CCE
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLD------NLDARRHVNRLCLAAD-VPL 131 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alD------n~~ar~~in~~c~~~~-~pl 131 (563)
+++...-.+.++++|+||++.. |...-..+-+.|.+.+ +..
T Consensus 64 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~ 111 (313)
T 1qyd_A 64 LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKR 111 (313)
T ss_dssp SSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSE
T ss_pred CCCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCce
Confidence 6543333466789999999653 3444455666777776 543
No 151
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=93.23 E-value=0.11 Score=51.28 Aligned_cols=32 Identities=28% Similarity=0.543 Sum_probs=26.3
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
++|+|.|+ |.+|..+++.|. .|. +++.+|.+.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~ 33 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG-NLIALDVHS 33 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS-EEEEECTTC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC-eEEEecccc
Confidence 37999996 999999999999 784 688777543
No 152
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=93.22 E-value=0.32 Score=48.52 Aligned_cols=32 Identities=31% Similarity=0.534 Sum_probs=26.9
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.| .|.||..+++.|+..|. +++++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4799998 59999999999999995 67777643
No 153
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.22 E-value=0.39 Score=48.60 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=49.3
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHh----hCCCceEEEec
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLK----FRPQMSITAHH 88 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~----~np~v~I~~~~ 88 (563)
.||.|+|+|.+|..++..|+..|.-.++++|.+. .|++..+..+.+ .....++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 6899999999999999999999974599988542 122222222222 23345555432
Q ss_pred cCCCCCcchHhhcccccEEEEccCC
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+ + +-++++|+||.+...
T Consensus 64 d------~--~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 64 N------Y--ADTANSDVIVVTSGA 80 (309)
T ss_dssp C------G--GGGTTCSEEEECCCC
T ss_pred C------H--HHHCCCCEEEEcCCC
Confidence 1 1 347899999998754
No 154
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=93.21 E-value=0.21 Score=48.59 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=29.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899998 67999999999999997 6888774
No 155
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.19 E-value=0.27 Score=47.46 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=28.9
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899998 68999999999999996 6888763
No 156
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.18 E-value=0.19 Score=51.37 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=31.6
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+..||.|+|+|.+|+.++..|+..|+++++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45689999999999999999999999889999854
No 157
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.16 E-value=0.11 Score=50.97 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=61.4
Q ss_pred CcEEEECC-cHHHHHHHHHHHHh--CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 13 AKVLMVGA-GGIGCELLKTLALS--GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~--Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
++|+|.|+ |.+|..+++.|... |. ++++++.+. + ++.. +.. +. ++.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~---~----------------~~~~----l~~--~~--~~~~~~ 52 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNV---E----------------KAST----LAD--QG--VEVRHG 52 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCT---T----------------TTHH----HHH--TT--CEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCH---H----------------HHhH----Hhh--cC--CeEEEe
Confidence 47999996 99999999999988 74 677776421 0 1111 111 22 334555
Q ss_pred CCCCCcchHhhcccccEEEEccC-------CHHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD-------NLDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD-------n~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
++++...-.+.++++|+||.+.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 53 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 53 DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred ccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 66543333456778999998643 44444556667777775 566666554
No 158
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=93.15 E-value=0.26 Score=48.26 Aligned_cols=39 Identities=23% Similarity=0.297 Sum_probs=27.7
Q ss_pred HHHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 5 RQLEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 5 ~~q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+.++++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 ~~~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 4 TSHEASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp -------CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 345567788888887 68999999999999996 6777764
No 159
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.15 E-value=0.16 Score=49.27 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=49.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC---CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF---QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv---g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
..||.|||+|.+|..+++.|+..|. .+++++|.+ ..|++.+++.. ++.+
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~-------------------~~~~~~~~~~~-----g~~~---- 53 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN-------------------TANLKNASEKY-----GLTT---- 53 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC-------------------HHHHHHHHHHH-----CCEE----
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC-------------------HHHHHHHHHHh-----CCEE----
Confidence 3689999999999999999999996 367777632 22444333322 1221
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHH
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVN 121 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in 121 (563)
. ....+..++.|+|+.|+.....+..+.
T Consensus 54 ---~--~~~~e~~~~aDvVilav~~~~~~~v~~ 81 (247)
T 3gt0_A 54 ---T--TDNNEVAKNADILILSIKPDLYASIIN 81 (247)
T ss_dssp ---C--SCHHHHHHHCSEEEECSCTTTHHHHC-
T ss_pred ---e--CChHHHHHhCCEEEEEeCHHHHHHHHH
Confidence 1 113456788999999996544444443
No 160
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.12 E-value=0.3 Score=48.19 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=59.6
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.|+ |.+|..+++.|...|. ++++++.+.-.. + ...|+..+. .+. .++ ++.+..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~----~---------~~~~~~~~~-~l~--~~~--v~~v~~D 64 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTAS----S---------NSEKAQLLE-SFK--ASG--ANIVHGS 64 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTT----T---------THHHHHHHH-HHH--TTT--CEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccc----c---------CHHHHHHHH-HHH--hCC--CEEEEec
Confidence 468999996 9999999999999994 566665321100 0 012332221 121 233 4445566
Q ss_pred CCCCcchHhhcccccEEEEccCCH--HHHHHHHHHHHhcC-CCE
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNL--DARRHVNRLCLAAD-VPL 131 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~--~ar~~in~~c~~~~-~pl 131 (563)
+++...-.+.+++.|+||++.... ..-..+-+.|.+.+ ++.
T Consensus 65 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (308)
T 1qyc_A 65 IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKR 108 (308)
T ss_dssp TTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSE
T ss_pred cCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCce
Confidence 654333345678899999976532 22344556667666 543
No 161
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.12 E-value=0.24 Score=48.94 Aligned_cols=81 Identities=11% Similarity=0.277 Sum_probs=50.9
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
-.|++++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+.... .++..
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~ 86 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKP-------------------GSTAAVQQRIIASG--GTAQE 86 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESST-------------------TTTHHHHHHHHHTT--CCEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCH-------------------HHHHHHHHHHHhcC--CeEEE
Confidence 346778888888 58999999999999997 687876421 12233444444433 35556
Q ss_pred eccCCCCCcchHhhc------ccccEEEEc
Q 008516 87 HHANVKDPKFNVEFF------KQFNVVLNG 110 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~------~~~dvVi~a 110 (563)
+..++++...-..++ .+.|++|++
T Consensus 87 ~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnn 116 (275)
T 4imr_A 87 LAGDLSEAGAGTDLIERAEAIAPVDILVIN 116 (275)
T ss_dssp EECCTTSTTHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEecCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 666665443223333 256777764
No 162
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.11 E-value=0.17 Score=51.17 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=30.1
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.-.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 34689999999999999999999997 788887543
No 163
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.06 E-value=0.34 Score=47.08 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=28.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677899998 68999999999999996 6777764
No 164
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=93.06 E-value=0.11 Score=51.27 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=24.0
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGF 36 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gv 36 (563)
++.++|+|.| .|.||..+++.|...|.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 4578999999 59999999999999986
No 165
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=93.06 E-value=0.35 Score=51.76 Aligned_cols=125 Identities=13% Similarity=0.177 Sum_probs=67.3
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHh---CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEE
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALS---GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSIT 85 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~---Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~ 85 (563)
...++|+|.|+ |+||.++++.|+.. | .++.+++...-....+.|. -..-.-|.+ ... +...... .-+++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g-~~V~~l~R~~~~~~~~~~l--~~~~~~~~~--~~~-~~~~~~~-~~~v~ 143 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVD-GRLICLVRAESDEDARRRL--EKTFDSGDP--ELL-RHFKELA-ADRLE 143 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTT-CEEEEEECSSSHHHHHHHH--HGGGCSSCH--HHH-HHHHHHH-TTTEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCC-CEEEEEECCCCcHHHHHHH--HHHHHhcch--hhh-hhhhhhc-cCceE
Confidence 35678999995 99999999999998 4 3677776432111000000 000000000 000 0011111 13567
Q ss_pred EeccCCCCCcc------hHhhcccccEEEEccC-------------CHHHHHHHHHHHHhcCC-CEEEecccccee
Q 008516 86 AHHANVKDPKF------NVEFFKQFNVVLNGLD-------------NLDARRHVNRLCLAADV-PLVESGTTGFLG 141 (563)
Q Consensus 86 ~~~~~i~~~~~------~~~~~~~~dvVi~alD-------------n~~ar~~in~~c~~~~~-pli~~gt~G~~G 141 (563)
.+..++++..+ -...+++.|+||++.. |...-..+-+.|...++ ++|..++.+.+|
T Consensus 144 ~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 144 VVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219 (478)
T ss_dssp EEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGT
T ss_pred EEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcC
Confidence 77777754321 2345678999998642 23334456667777664 788777765443
No 166
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=93.01 E-value=0.39 Score=46.34 Aligned_cols=33 Identities=33% Similarity=0.439 Sum_probs=27.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.||.|||+|.+|..++++|...|+.-..+.|.+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 379999999999999999998887544677755
No 167
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=93.00 E-value=0.19 Score=50.05 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=26.2
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
.+++|+|.| .|.||..+++.|...|. ++++++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~ 34 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLR 34 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT-EEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEe
Confidence 356899999 59999999999999886 455554
No 168
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.00 E-value=0.32 Score=49.74 Aligned_cols=74 Identities=24% Similarity=0.310 Sum_probs=50.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhh---CCCceEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKF---RPQMSITAH 87 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~---np~v~I~~~ 87 (563)
..||.|+|+|.+|..++-.|+..|. .+|.++|- -..|++..+..+.+. ...+++.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~i~~- 68 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLSNALPFTSPKKIYS- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHhHHHHHHHHHHHHhcCCeEEEE-
Confidence 4689999999999999999998885 57888873 223454434444433 24455553
Q ss_pred ccCCCCCcchHhhcccccEEEEccCC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+. .+-++++|+||.+...
T Consensus 69 -~~-------~~a~~~aDvVii~ag~ 86 (326)
T 2zqz_A 69 -AE-------YSDAKDADLVVITAGA 86 (326)
T ss_dssp -CC-------GGGGGGCSEEEECCCC
T ss_pred -CC-------HHHhCCCCEEEEcCCC
Confidence 11 2348999999998653
No 169
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.00 E-value=0.17 Score=49.04 Aligned_cols=35 Identities=31% Similarity=0.540 Sum_probs=29.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r 38 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDI 38 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 47788999998 58999999999999997 5777664
No 170
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=92.99 E-value=0.2 Score=48.85 Aligned_cols=63 Identities=16% Similarity=0.336 Sum_probs=44.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+.. .++..+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 83 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARD-------------------VEKLRAVEREIVAAG--GEAESH 83 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTT--CEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhC--CceeEE
Confidence 35677899998 58999999999999997 57777643 234555555665543 356666
Q ss_pred ccCCCC
Q 008516 88 HANVKD 93 (563)
Q Consensus 88 ~~~i~~ 93 (563)
..++++
T Consensus 84 ~~D~~~ 89 (262)
T 3rkr_A 84 ACDLSH 89 (262)
T ss_dssp ECCTTC
T ss_pred EecCCC
Confidence 666654
No 171
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.97 E-value=0.53 Score=46.83 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=58.8
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCC-chHHHHHHHHHHhhCCCceEEEecc
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVG-QSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diG-k~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- +-. ..|++.+.+ +. .++ ++.+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--------------~~~~~~~~~~l~~-~~--~~~--v~~v~~ 63 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLT--------------PDSTPSSVQLREE-FR--SMG--VTIIEG 63 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCC--------------TTCCHHHHHHHHH-HH--HTT--CEEEEC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcc--------------cccChHHHHHHHH-hh--cCC--cEEEEe
Confidence 467999996 9999999999999995 6777664310 000 123322221 21 133 344555
Q ss_pred CCCCCcchHhhcccccEEEEccCCH--HHHHHHHHHHHhcC-CC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNL--DARRHVNRLCLAAD-VP 130 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~--~ar~~in~~c~~~~-~p 130 (563)
++++...-...+++.|+||++.... ..-..+-+.|.+.+ ++
T Consensus 64 D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (321)
T 3c1o_A 64 EMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIK 107 (321)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCC
T ss_pred cCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCcc
Confidence 6654333346688999999976532 23334455666665 44
No 172
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.96 E-value=0.22 Score=49.09 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=29.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788899998 57999999999999998 7888764
No 173
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=92.96 E-value=0.25 Score=48.65 Aligned_cols=79 Identities=20% Similarity=0.348 Sum_probs=50.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.... .++..+.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~--~~~~~~~ 59 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARR-------------------QARIEAIATEIRDAG--GTALAQV 59 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcC--CcEEEEE
Confidence 3567788888 58999999999999997 57777633 234555555665543 3566666
Q ss_pred cCCCCCcchHhh-------cccccEEEEc
Q 008516 89 ANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
.++++...-..+ +.+.|++|++
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 88 (264)
T 3tfo_A 60 LDVTDRHSVAAFAQAAVDTWGRIDVLVNN 88 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 666543222222 2356777774
No 174
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.95 E-value=0.24 Score=48.85 Aligned_cols=74 Identities=20% Similarity=0.205 Sum_probs=47.8
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVK 92 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i~ 92 (563)
.+|.|||+|.+|+.+++.|+. |. +++++|.+ ..|++.+++. ++.+. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~-------------------~~~~~~~~~~------g~~~~--~---- 48 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRT-------------------FEKALRHQEE------FGSEA--V---- 48 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSS-------------------THHHHHHHHH------HCCEE--C----
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCC-------------------HHHHHHHHHC------CCccc--C----
Confidence 479999999999999999999 87 57777632 1233333322 11111 1
Q ss_pred CCcchHhhcccccEEEEccCCHH-HHHHHHHH
Q 008516 93 DPKFNVEFFKQFNVVLNGLDNLD-ARRHVNRL 123 (563)
Q Consensus 93 ~~~~~~~~~~~~dvVi~alDn~~-ar~~in~~ 123 (563)
..+.+.++|+|+.++-+.. .+..+.++
T Consensus 49 ----~~~~~~~~D~vi~~v~~~~~~~~v~~~l 76 (289)
T 2cvz_A 49 ----PLERVAEARVIFTCLPTTREVYEVAEAL 76 (289)
T ss_dssp ----CGGGGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred ----HHHHHhCCCEEEEeCCChHHHHHHHHHH
Confidence 1245678999999998765 44444433
No 175
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.95 E-value=0.29 Score=49.75 Aligned_cols=33 Identities=33% Similarity=0.654 Sum_probs=28.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
.||.|+|+|.+|+.++..|+..|. ++++++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999995 478888743
No 176
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.94 E-value=0.45 Score=46.82 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=56.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+.-....+. +. .-...+.+.+++.+.+.. .++..+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~--~~~~~~ 82 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVT----YA--PASPEDLDETARLVEDQG--RKALTR 82 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCC----SC--CCCHHHHHHHHHHHHTTT--CCEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecccccccccc----cc--ccCHHHHHHHHHHHHhcC--CeEEEE
Confidence 47788899998 68999999999999997 6888886432111111 10 112344555556565543 456666
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-.++ +.+.|++|++
T Consensus 83 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 112 (280)
T 3pgx_A 83 VLDVRDDAALRELVADGMEQFGRLDVVVAN 112 (280)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6677543222222 2367888875
No 177
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=92.91 E-value=0.12 Score=50.64 Aligned_cols=31 Identities=32% Similarity=0.559 Sum_probs=26.8
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~ 44 (563)
++|+|.|+ |.||..+++.|...|. +++.+|.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 48999995 9999999999999885 6777775
No 178
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.90 E-value=0.29 Score=49.03 Aligned_cols=79 Identities=20% Similarity=0.271 Sum_probs=52.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.... .++..+.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~--~~~~~~~ 86 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVD-------------------QPALEQAVNGLRGQG--FDAHGVV 86 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTT--CCEEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcC--CceEEEE
Confidence 5677899998 58999999999999997 57777643 234455555555543 3556666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-.+++ .+.|+||++
T Consensus 87 ~Dv~d~~~v~~~~~~~~~~~g~id~lvnn 115 (301)
T 3tjr_A 87 CDVRHLDEMVRLADEAFRLLGGVDVVFSN 115 (301)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCSEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 6665432222232 367888875
No 179
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.89 E-value=0.12 Score=52.95 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=29.8
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.||.|+|+|.+|..++..|+..|...++++|.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999854
No 180
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.83 E-value=0.23 Score=48.58 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.+.. .++..+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 65 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAART-------------------VERLEDVAKQVTDTG--RRALSV 65 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTT--CCEEEE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCC-------------------HHHHHHHHHHHHhcC--CcEEEE
Confidence 46788899998 57999999999999997 57777642 234455555555443 345556
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-.++ +.+.|++|++
T Consensus 66 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 95 (264)
T 3ucx_A 66 GTDITDDAQVAHLVDETMKAYGRVDVVINN 95 (264)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 6666543222222 2356777764
No 181
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.83 E-value=0.36 Score=46.64 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=29.0
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 39 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAAR 39 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 6678899998 68999999999999997 5777763
No 182
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=92.80 E-value=0.22 Score=48.48 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=51.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+++..+ ++..+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~ 66 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLK-------------------SEGAEAVAAAIRQAGG--KAIGL 66 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESS-------------------HHHHHHHHHHHHHTTC--CEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC--cEEEE
Confidence 36678889988 68999999999999997 47777642 2345555566655443 45556
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-.+++ .+.|++|++
T Consensus 67 ~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 96 (256)
T 3gaf_A 67 ECNVTDEQHREAVIKAALDQFGKITVLVNN 96 (256)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665432222222 356777764
No 183
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=92.78 E-value=0.32 Score=48.24 Aligned_cols=86 Identities=14% Similarity=0.254 Sum_probs=52.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+.-....+. .+.+.+++.+.+.. .++..+.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~ 71 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLP------------GTIYTAAKEIEEAG--GQALPIV 71 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSC------------CCHHHHHHHHHHHT--SEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhh------------HHHHHHHHHHHhcC--CcEEEEE
Confidence 5678899998 58999999999999997 6888876543222221 12333444455543 3566666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-.+++ .+.|++|++
T Consensus 72 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 100 (285)
T 3sc4_A 72 GDIRDGDAVAAAVAKTVEQFGGIDICVNN 100 (285)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6665432222222 256666664
No 184
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.78 E-value=0.2 Score=48.44 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=27.6
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHH-hCCCeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLAL-SGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal-~Gvg~I~iiD~D 45 (563)
++++|+|.| .||||.++++.|+. .|. ++.++|.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARD 38 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCC
Confidence 356788887 69999999999999 897 67777643
No 185
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.76 E-value=0.6 Score=46.00 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=60.7
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.|+ |++|..+++.|...|-.++++++.+.- +.++ +.+.. +++ +....+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-----------------~~~~----~~l~~--~~~--~~~~~D 59 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-----------------KKAA----KELRL--QGA--EVVQGD 59 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-----------------SHHH----HHHHH--TTC--EEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-----------------CHHH----HHHHH--CCC--EEEEec
Confidence 468999997 999999999999988336777653310 1111 11221 233 445556
Q ss_pred CCCCcchHhhcccccEEEEccCCH---------HHHHHHHHHHHhcCC-CEEEeccccc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNL---------DARRHVNRLCLAADV-PLVESGTTGF 139 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~---------~ar~~in~~c~~~~~-pli~~gt~G~ 139 (563)
+++...-...+++.|+||++.... ..-..+-+.|.+.++ .+|.+++.+.
T Consensus 60 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~ 118 (299)
T 2wm3_A 60 QDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENI 118 (299)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCH
T ss_pred CCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 654333345678899999976421 122233445666665 3566555443
No 186
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.76 E-value=0.21 Score=51.55 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=51.6
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhh-CCCceEEE
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKF-RPQMSITA 86 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~-np~v~I~~ 86 (563)
+...||.|+|+ |.+|+.++-.++..|. .++.++|.+ +.|++..+.-+.+. .|..++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 46789999997 9999999999999997 579998842 23555444444432 23223322
Q ss_pred eccCCCCCcchHhhcccccEEEEccCC
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
. . ...+-++++|+||.+...
T Consensus 67 t-----~--d~~~al~dADvVvitaG~ 86 (343)
T 3fi9_A 67 T-----S--DIKEALTDAKYIVSSGGA 86 (343)
T ss_dssp E-----S--CHHHHHTTEEEEEECCC-
T ss_pred c-----C--CHHHHhCCCCEEEEccCC
Confidence 1 1 123457899999987653
No 187
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.75 E-value=0.26 Score=47.92 Aligned_cols=36 Identities=31% Similarity=0.572 Sum_probs=30.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 68999999999999997 57787743
No 188
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=92.75 E-value=0.33 Score=48.10 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=29.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46677899998 68999999999999997 6777764
No 189
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=92.72 E-value=0.35 Score=47.53 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=56.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
++.+++++|.| .||||.++++.|+..|. ++.++|.+.-..+.+.+. . -...+.+.+.+.+...+ .++..+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~--~~~~~~ 78 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYD----P--ASPDDLSETVRLVEAAN--RRIVAA 78 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSC----C--CCHHHHHHHHHHHHHTT--CCEEEE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecccccccccccc----c--cCHHHHHHHHHHHHhcC--CeEEEE
Confidence 57788899998 58999999999999998 688888643222222111 0 12234444555555544 356666
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-..+ +.+.|++|++
T Consensus 79 ~~D~~~~~~v~~~~~~~~~~~g~id~lvnn 108 (277)
T 3tsc_A 79 VVDTRDFDRLRKVVDDGVAALGRLDIIVAN 108 (277)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6666543222222 2457888874
No 190
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.71 E-value=0.39 Score=47.99 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=27.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+-.+++|||.| .|+||..+++.|...|. +++++|.+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC
Confidence 44678999998 59999999999999995 78887753
No 191
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=92.70 E-value=0.38 Score=45.91 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=27.8
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCC------eEEEEeC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQ------DIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg------~I~iiD~ 44 (563)
+++|+|.| .||||.++++.|+..|.. ++.++|.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 45788998 689999999999999985 6777764
No 192
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=92.57 E-value=0.26 Score=48.30 Aligned_cols=63 Identities=24% Similarity=0.342 Sum_probs=42.0
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++|+|.| .||||.++++.|+..|. ++.+++.+. ..+.+.+++.+++.. .++..+.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~--~~~~~~~ 85 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSN------------------AEVADALKNELEEKG--YKAAVIK 85 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSC------------------HHHHHHHHHHHHHTT--CCEEEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCC------------------HHHHHHHHHHHHhcC--CceEEEE
Confidence 5677889988 58999999999999998 577766321 233445555555543 3455555
Q ss_pred cCCCC
Q 008516 89 ANVKD 93 (563)
Q Consensus 89 ~~i~~ 93 (563)
.++++
T Consensus 86 ~D~~~ 90 (271)
T 4iin_A 86 FDAAS 90 (271)
T ss_dssp CCTTC
T ss_pred CCCCC
Confidence 55543
No 193
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=92.56 E-value=0.22 Score=48.35 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=46.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHH---hCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEE
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLAL---SGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSIT 85 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal---~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~ 85 (563)
|++++++|.| .||||.++++.|+. .|. ++.++|.+. .+.+.+++.+.+.+|..++.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~ 63 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSE-------------------SMLRQLKEELGAQQPDLKVV 63 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTSEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCH-------------------HHHHHHHHHHHhhCCCCeEE
Confidence 5667788887 68999999999998 786 677776321 34555566666666666777
Q ss_pred EeccCCCC
Q 008516 86 AHHANVKD 93 (563)
Q Consensus 86 ~~~~~i~~ 93 (563)
.+..++++
T Consensus 64 ~~~~Dv~~ 71 (259)
T 1oaa_A 64 LAAADLGT 71 (259)
T ss_dssp EEECCTTS
T ss_pred EEecCCCC
Confidence 77777754
No 194
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.55 E-value=0.35 Score=49.71 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=53.3
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCce
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMS 83 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~ 83 (563)
......||.|+|+|.+|+.++-.|+..|. .++.++|.+ ..|++..+.-+.+.. +..+
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 35567899999999999999999999997 479998732 356666666666543 2223
Q ss_pred EEEeccCCCCCcchHhhcccccEEEEccC
Q 008516 84 ITAHHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 84 I~~~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+... . .+ +-++++|+||.+..
T Consensus 76 i~~~-~-----d~--~~~~~aDiVvi~aG 96 (331)
T 4aj2_A 76 IVSS-K-----DY--SVTANSKLVIITAG 96 (331)
T ss_dssp EEEC-S-----SG--GGGTTEEEEEECCS
T ss_pred EEEc-C-----CH--HHhCCCCEEEEccC
Confidence 3221 1 12 34899999988743
No 195
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.55 E-value=0.31 Score=46.76 Aligned_cols=35 Identities=29% Similarity=0.528 Sum_probs=29.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++|+|.| .|+||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRK 40 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCC
Confidence 6778899998 58999999999999997 57777643
No 196
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=92.54 E-value=0.35 Score=46.03 Aligned_cols=78 Identities=18% Similarity=0.315 Sum_probs=49.4
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+.+.. ..++..+..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~~~D 60 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSV-------------------DRLEKIAHELMQEQ-GVEVFYHHLD 60 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHH-CCCEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhc-CCeEEEEEec
Confidence 45788888 58999999999999997 477776431 34444445544222 3456666667
Q ss_pred CCCCcchHhhc-------ccccEEEEc
Q 008516 91 VKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 91 i~~~~~~~~~~-------~~~dvVi~a 110 (563)
+++...-.+++ .+.|++|++
T Consensus 61 ~~~~~~v~~~~~~~~~~~g~id~li~~ 87 (235)
T 3l77_A 61 VSKAESVEEFSKKVLERFGDVDVVVAN 87 (235)
T ss_dssp TTCHHHHHHHCC-HHHHHSSCSEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 75432222333 367888775
No 197
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.52 E-value=0.35 Score=47.93 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=28.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.++.++|.| .||||.++++.|+..|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 35667888998 68999999999999997 6777774
No 198
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=92.52 E-value=0.67 Score=47.51 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=27.6
Q ss_pred CCcEEEEC-CcHHHHHHHHHHH-HhCCCeEEEEeCC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLA-LSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLa-l~Gvg~I~iiD~D 45 (563)
+++|+|.| .|+||..+++.|+ ..|. +++++|..
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 45899998 5999999999999 9985 68777743
No 199
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.51 E-value=0.47 Score=46.91 Aligned_cols=80 Identities=19% Similarity=0.277 Sum_probs=50.9
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.. ...+.+.+++.+.... .++..+.
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~------------------~~~~~~~~~~~~~~~~--~~~~~~~ 85 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIG------------------DAEGVAPVIAELSGLG--ARVIFLR 85 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC------------------CHHHHHHHHHHHHHTT--CCEEEEE
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCC------------------CHHHHHHHHHHHHhcC--CcEEEEE
Confidence 4566788888 58999999999999997 57777631 1134445555555543 3566666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-..++ .+.|+||++
T Consensus 86 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 114 (280)
T 4da9_A 86 ADLADLSSHQATVDAVVAEFGRIDCLVNN 114 (280)
T ss_dssp CCTTSGGGHHHHHHHHHHHHSCCCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6775543223333 256777764
No 200
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=92.50 E-value=0.31 Score=47.44 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=28.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVAR 39 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 4567899998 58999999999999997 6777764
No 201
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.49 E-value=0.21 Score=49.24 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=49.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+.+.+++..+ ++..+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~--~~~~~ 80 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTD-------------------PSRVAQTVQEFRNVGH--DAEAV 80 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSC-------------------HHHHHHHHHHHHHTTC--CEEEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC--ceEEE
Confidence 35677888888 58999999999999997 57775532 2344455555555433 45555
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-.+++ .+.|+||++
T Consensus 81 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 110 (271)
T 4ibo_A 81 AFDVTSESEIIEAFARLDEQGIDVDILVNN 110 (271)
T ss_dssp CCCTTCHHHHHHHHHHHHHHTCCCCEEEEC
T ss_pred EcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 55664432222222 256776664
No 202
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=92.48 E-value=0.52 Score=46.28 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=30.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 5678899998 68999999999999997 788888654
No 203
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=92.48 E-value=0.35 Score=46.70 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=29.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 36778899987 78999999999999996 5777764
No 204
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.48 E-value=0.5 Score=46.37 Aligned_cols=92 Identities=21% Similarity=0.158 Sum_probs=54.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|.+.-. .+.- ...-...+.+.+.+.+.... .++..+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~ 76 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDI----ETNE---YPLATSRDLEEAGLEVEKTG--RKAYTA 76 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCC----TTSC---SCCCCHHHHHHHHHHHHHTT--SCEEEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccc----cccc---cchhhhHHHHHHHHHHHhcC--CceEEE
Confidence 46788899998 57999999999999997 58888754211 1110 00012234444555555543 456666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-.+++ .+.|+||++
T Consensus 77 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 106 (287)
T 3pxx_A 77 EVDVRDRAAVSRELANAVAEFGKLDVVVAN 106 (287)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665432222222 366777774
No 205
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.47 E-value=0.25 Score=53.27 Aligned_cols=36 Identities=17% Similarity=0.361 Sum_probs=28.9
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+.+++|.|||+|.+|+.++++|+..|. ++++.|.
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 45778999999999999999999999997 5777763
No 206
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.47 E-value=0.32 Score=48.25 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=27.5
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+|.|||+|.+|..+++.|+..|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 589999999999999999999996 5777763
No 207
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=92.44 E-value=0.27 Score=48.65 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=29.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778899998 68999999999999997 5888774
No 208
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.41 E-value=0.46 Score=48.39 Aligned_cols=74 Identities=14% Similarity=0.200 Sum_probs=50.0
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhh----CCCceEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKF----RPQMSITAH 87 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~----np~v~I~~~ 87 (563)
+||.|+|+|.+|..++..|+..|+ ++++++|.+. .|++..+.-+.+. ...+++.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGT 61 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEEC
Confidence 479999999999999999999997 5899988432 2333333333332 234566543
Q ss_pred ccCCCCCcchHhhcccccEEEEccCC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
. +.+-++++|+||.+...
T Consensus 62 ~--------~~~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 62 N--------DYGPTEDSDVCIITAGL 79 (314)
T ss_dssp S--------SSGGGTTCSEEEECCCC
T ss_pred C--------CHHHhCCCCEEEECCCC
Confidence 1 12457899999998654
No 209
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=92.40 E-value=0.35 Score=47.97 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=52.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCceE
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMSI 84 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~I 84 (563)
+|.+++|+|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+.... ...++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 74 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKL-------------------ERLKSAADELQANLPPTKQARV 74 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTSCTTCCCCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhccccCCccE
Confidence 46778899998 68999999999999996 577776421 23344444444421 13456
Q ss_pred EEeccCCCCCcchHhhc-------ccccEEEEcc
Q 008516 85 TAHHANVKDPKFNVEFF-------KQFNVVLNGL 111 (563)
Q Consensus 85 ~~~~~~i~~~~~~~~~~-------~~~dvVi~al 111 (563)
..+..++++...-..++ .+.|+||++.
T Consensus 75 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~A 108 (303)
T 1yxm_A 75 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 108 (303)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 66666665432222233 3578888753
No 210
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=92.37 E-value=0.18 Score=50.07 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=49.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
++.+++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+++.+.+ +..++..+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~--~~~~~~~~ 62 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNG-------------------NALAELTDEIAG--GGGEAAAL 62 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCH-------------------HHHHHHHHHHTT--TTCCEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHHHHHHHh--cCCcEEEE
Confidence 46678888888 58999999999999997 577766431 233444444433 23455666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|++|++
T Consensus 63 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn 92 (280)
T 3tox_A 63 AGDVGDEALHEALVELAVRRFGGLDTAFNN 92 (280)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665432222222 367777774
No 211
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=92.35 E-value=0.26 Score=48.28 Aligned_cols=81 Identities=21% Similarity=0.383 Sum_probs=52.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+|.+++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+++.+.+.. ..++..+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~-~~~~~~~ 75 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRD-------------------VSELDAARRALGEQF-GTDVHTV 75 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHH-CCCEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhc-CCcEEEE
Confidence 36678888888 68999999999999997 57787643 234444555554421 3456667
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|++|++
T Consensus 76 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 105 (266)
T 4egf_A 76 AIDLAEPDAPAELARRAAEAFGGLDVLVNN 105 (266)
T ss_dssp ECCTTSTTHHHHHHHHHHHHHTSCSEEEEE
T ss_pred EecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 77775543222332 366777774
No 212
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.35 E-value=0.1 Score=52.54 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.7
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++++|+|+||.|..++..|...|+++|+|++
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~n 153 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVT 153 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEE
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEe
Confidence 4678999999999999999999999999999986
No 213
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=92.35 E-value=0.62 Score=46.75 Aligned_cols=108 Identities=11% Similarity=0.114 Sum_probs=64.3
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
++|+|.| .|+||..+++.|+..|- -+++++|...-.. +. . .+..+. .-+++.+..+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~--~------------------~~~~~~-~~~~~~~~~D 62 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG-NK--A------------------NLEAIL-GDRVELVVGD 62 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CG--G------------------GTGGGC-SSSEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC-Ch--h------------------HHhhhc-cCCeEEEECC
Confidence 5899999 59999999999999943 2688877532100 00 0 011111 1245556666
Q ss_pred CCCCcchHhhcccccEEEEccCCH-----------------HHHHHHHHHHHhcCCCEEEeccccceee
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNL-----------------DARRHVNRLCLAADVPLVESGTTGFLGQ 142 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~-----------------~ar~~in~~c~~~~~pli~~gt~G~~G~ 142 (563)
+++...-.+.++++|+||.+.... ..-..+-+.|...+..+|..++.+.+|.
T Consensus 63 l~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~ 131 (348)
T 1oc2_A 63 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGD 131 (348)
T ss_dssp TTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCC
T ss_pred CCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCC
Confidence 654433345677889999864321 1123344566666777888777665553
No 214
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.35 E-value=0.12 Score=54.06 Aligned_cols=37 Identities=27% Similarity=0.457 Sum_probs=35.0
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+|.+.||+|+|+|..|..+++.|..+|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788999999999999999999999999999999976
No 215
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.32 E-value=0.31 Score=49.41 Aligned_cols=35 Identities=17% Similarity=0.468 Sum_probs=29.6
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
....+|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 345689999999999999999999997 68887643
No 216
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.32 E-value=0.12 Score=47.87 Aligned_cols=32 Identities=22% Similarity=0.496 Sum_probs=29.1
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+..|+|||+|..|..+|..|++.|+ +++|+|.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek 33 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEEC
Confidence 4579999999999999999999999 5899884
No 217
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=92.30 E-value=0.16 Score=49.25 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=29.6
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+++++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5678899998 68999999999999996 68887743
No 218
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.29 E-value=0.26 Score=46.79 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=28.0
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhC-CCeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSG-FQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~G-vg~I~iiD~D 45 (563)
..++|+|.| .|++|.++++.|+..| -.++++++.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 357899998 6999999999999995 2367777654
No 219
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=92.29 E-value=0.26 Score=48.08 Aligned_cols=82 Identities=20% Similarity=0.331 Sum_probs=50.0
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.+. .+.+.+.+.+.+..+..++..+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 64 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNL-------------------EAGVQCKAALHEQFEPQKTLFIQ 64 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHTTTSCGGGEEEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHHHHHHHhhcCCCceEEEe
Confidence 4567899998 58999999999999996 677776331 23333334444333334566666
Q ss_pred cCCCCCcchHhh-------cccccEEEEcc
Q 008516 89 ANVKDPKFNVEF-------FKQFNVVLNGL 111 (563)
Q Consensus 89 ~~i~~~~~~~~~-------~~~~dvVi~al 111 (563)
.++++...-..+ +.+.|+||++.
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~A 94 (267)
T 2gdz_A 65 CDVADQQQLRDTFRKVVDHFGRLDILVNNA 94 (267)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 666543221222 23568888853
No 220
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.28 E-value=0.23 Score=50.77 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=27.4
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+||+|.| .|.+|..+++.|...|.-+++.+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999 69999999999999997566666643
No 221
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.28 E-value=0.35 Score=49.06 Aligned_cols=72 Identities=22% Similarity=0.316 Sum_probs=50.3
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC---CCceEEEec
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR---PQMSITAHH 88 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n---p~v~I~~~~ 88 (563)
.||.|+|+|.+|..++-.|+..|. ++|.++|-+ ..|++..+..+.+.. ..+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 489999999999999999998875 579998843 245554444444432 3556654
Q ss_pred cCCCCCcchHhhcccccEEEEccC
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+. .+-++++|+||.+..
T Consensus 60 ~~-------~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 GS-------YGDLEGARAVVLAAG 76 (310)
T ss_dssp CC-------GGGGTTEEEEEECCC
T ss_pred CC-------HHHhCCCCEEEECCC
Confidence 11 234889999999764
No 222
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.28 E-value=0.46 Score=48.76 Aligned_cols=74 Identities=12% Similarity=0.151 Sum_probs=49.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhh---CCCceEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKF---RPQMSITAH 87 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~---np~v~I~~~ 87 (563)
..||.|+|+|.+|..++..|+..|+ ++++++|-+ ..|++..+.-+.+. .+..++...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~t 81 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVSG 81 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEEc
Confidence 4789999999999999999999997 689998832 23444433333332 233445432
Q ss_pred ccCCCCCcchHhhcccccEEEEccC
Q 008516 88 HANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 88 ~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
. + +. + ++++|+||.+..
T Consensus 82 ~-d-----~~-~-~~daDiVIitaG 98 (330)
T 3ldh_A 82 K-D-----YS-V-SAGSKLVVITAG 98 (330)
T ss_dssp S-S-----SC-S-CSSCSEEEECCS
T ss_pred C-C-----HH-H-hCCCCEEEEeCC
Confidence 1 1 21 2 789999998743
No 223
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=92.27 E-value=0.4 Score=46.66 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=29.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 46778899998 68999999999999996 6777764
No 224
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=92.27 E-value=0.21 Score=48.99 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=28.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+=..++|+|.| .|.||..+++.|...|. +++++|.+
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 34567899998 59999999999999984 67777754
No 225
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.24 E-value=0.28 Score=47.11 Aligned_cols=62 Identities=21% Similarity=0.245 Sum_probs=42.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+ ..+.+.+.+.+++..+ ++..+.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~~ 60 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATS-------------------QASAEKFENSMKEKGF--KARGLV 60 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHTTC--CEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC--ceEEEE
Confidence 5677888988 58999999999999997 57777643 2344555555555443 455555
Q ss_pred cCCCC
Q 008516 89 ANVKD 93 (563)
Q Consensus 89 ~~i~~ 93 (563)
.++++
T Consensus 61 ~D~~~ 65 (247)
T 3lyl_A 61 LNISD 65 (247)
T ss_dssp CCTTC
T ss_pred ecCCC
Confidence 55543
No 226
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=92.21 E-value=0.68 Score=45.33 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=57.2
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
..|.+++++|.| .||||.++++.|+..|. ++.++|.+.-. .++.. ..-...+.+.+.+.+....+ ++..
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~ 78 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQI-ASVPY------PLATPEELAATVKLVEDIGS--RIVA 78 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCC-TTCSS------CCCCHHHHHHHHHHHHHHTC--CEEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeccccc-ccccc------cccchHHHHHHHHHHHhcCC--eEEE
Confidence 457888999998 58999999999999997 57888754210 00000 00112344455555555543 5666
Q ss_pred eccCCCCCcchHhhc-------ccccEEEEc
Q 008516 87 HHANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
+..++++...-..++ .+.|++|++
T Consensus 79 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 109 (278)
T 3sx2_A 79 RQADVRDRESLSAALQAGLDELGRLDIVVAN 109 (278)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 777776543223333 367888885
No 227
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.21 E-value=0.41 Score=46.88 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=29.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 63 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDI 63 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEc
Confidence 5678899998 68999999999999996 5777774
No 228
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.19 E-value=0.75 Score=46.61 Aligned_cols=92 Identities=21% Similarity=0.246 Sum_probs=57.9
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.+|.|||+|.+|..+++.|...|.. +++++|.+. .+.+.+. +.. +. .....+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~-------------------~~~~~a~----~~G--~~-~~~~~~- 86 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISKAV----DLG--II-DEGTTS- 86 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHHHH----HTT--SC-SEEESC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH-------------------HHHHHHH----HCC--Cc-chhcCC-
Confidence 7899999999999999999999974 788877432 1222221 211 10 000111
Q ss_pred CCCcchHh-hcccccEEEEccCCHHHHHHHHHHHHh--cCCCEEEecc
Q 008516 92 KDPKFNVE-FFKQFNVVLNGLDNLDARRHVNRLCLA--ADVPLVESGT 136 (563)
Q Consensus 92 ~~~~~~~~-~~~~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~gt 136 (563)
..+ .++++|+||.|+-.......+.++... .+..+++.++
T Consensus 87 -----~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 87 -----IAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp -----TTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -----HHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 134 578999999998765566666555432 3555666554
No 229
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=92.19 E-value=0.24 Score=48.29 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=29.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778889988 58999999999999997 5777764
No 230
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=92.18 E-value=0.4 Score=48.35 Aligned_cols=73 Identities=26% Similarity=0.351 Sum_probs=47.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+.- +.| ...-...+.+.+++.+.... .++..+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~ 91 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----LDG-----SPASGGSAAQSVVDEITAAG--GEAVAD 91 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----TTS-----SBTCTTSHHHHHHHHHHHTT--CEEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----ccc-----cccccHHHHHHHHHHHHhcC--CcEEEE
Confidence 35677888887 68999999999999997 7888876531 111 11223445666666666554 356666
Q ss_pred ccCCCC
Q 008516 88 HANVKD 93 (563)
Q Consensus 88 ~~~i~~ 93 (563)
..++++
T Consensus 92 ~~Dv~d 97 (322)
T 3qlj_A 92 GSNVAD 97 (322)
T ss_dssp CCCTTS
T ss_pred ECCCCC
Confidence 666543
No 231
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.17 E-value=0.27 Score=48.47 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=28.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36677788887 68999999999999998 6777764
No 232
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.16 E-value=0.25 Score=49.00 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=28.1
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 479999999999999999999996 58887744
No 233
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.16 E-value=0.28 Score=47.59 Aligned_cols=40 Identities=20% Similarity=0.217 Sum_probs=29.8
Q ss_pred HHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCC--CeEEEEeCC
Q 008516 6 QLEAIKGAKVLMVG-AGGIGCELLKTLALSGF--QDIHIIDMD 45 (563)
Q Consensus 6 ~q~kL~~~~VlvvG-aGgiG~ellknLal~Gv--g~I~iiD~D 45 (563)
....++.++|+|.| .||||.++++.|+..|. .++.++|.+
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 34457788899997 68999999999999994 578888754
No 234
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=92.14 E-value=0.64 Score=45.79 Aligned_cols=96 Identities=17% Similarity=0.195 Sum_probs=55.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+|.+++++|.| .||||.++++.|+..|. ++.++|.+.-....+...-+ . .-...+.+.+++.+.... .++..+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~--~~~~~~ 81 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAI-P--ASTPEDLAETADLVKGHN--RRIVTA 81 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSS-C--CCCHHHHHHHHHHHHTTT--CCEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecccccccccccccc-c--cCCHHHHHHHHHHHhhcC--CceEEE
Confidence 46788899998 57999999999999997 58888865311111110000 0 011234444555555443 356666
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-..+ +.+.|++|++
T Consensus 82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 111 (286)
T 3uve_A 82 EVDVRDYDALKAAVDSGVEQLGRLDIIVAN 111 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 6677543222222 2366777774
No 235
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.11 E-value=0.19 Score=50.26 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=29.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
|++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 5667788887 58999999999999998 78888754
No 236
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=92.10 E-value=0.44 Score=46.94 Aligned_cols=80 Identities=19% Similarity=0.334 Sum_probs=49.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.++|... ..+.+.+++.+++.. .++..+.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~------------------~~~~~~~~~~l~~~~--~~~~~~~ 87 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNA------------------AERAQAVVSEIEQAG--GRAVAIR 87 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSC------------------HHHHHHHHHHHHHTT--CCEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCC------------------HHHHHHHHHHHHhcC--CcEEEEE
Confidence 4567899998 58999999999999997 466665321 234455555565543 3455566
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-.+++ .+.|++|++
T Consensus 88 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 116 (271)
T 3v2g_A 88 ADNRDAEAIEQAIRETVEALGGLDILVNS 116 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 6664432212222 256766664
No 237
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=92.10 E-value=0.38 Score=50.29 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=64.7
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC-------CceE
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP-------QMSI 84 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np-------~v~I 84 (563)
++|+|.|+ |+||.++++.|...|. ++++++... + .....+.+.+.+....+ ..++
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~---------------~-~~~~~~~l~~~l~~~~~~~~~~~~~~~v 132 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRAD---------------N-EEIAWYKLMTNLNDYFSEETVEMMLSNI 132 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECS---------------S-HHHHHHHHHHHHHHHSCHHHHHHHHTTE
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCC---------------C-hHHHHHHHHHHHHHhccccccccccCce
Confidence 48999995 9999999999977775 566654211 0 00112223333333221 1356
Q ss_pred EEeccCCCC-CcchHhhcccccEEEEccC--------------CHHHHHHHHHHHHhcCCCEEEeccccceee
Q 008516 85 TAHHANVKD-PKFNVEFFKQFNVVLNGLD--------------NLDARRHVNRLCLAADVPLVESGTTGFLGQ 142 (563)
Q Consensus 85 ~~~~~~i~~-~~~~~~~~~~~dvVi~alD--------------n~~ar~~in~~c~~~~~pli~~gt~G~~G~ 142 (563)
..+..++++ .... .+.+.|+||++.. |...-..+-+.|......+|..++.+. |.
T Consensus 133 ~~v~~Dl~d~~~l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 133 EVIVGDFECMDDVV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GT 202 (427)
T ss_dssp EEEEECC---CCCC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GS
T ss_pred EEEeCCCCCcccCC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CC
Confidence 666777754 2232 5678999999642 222334555666666678888777766 54
No 238
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.10 E-value=0.38 Score=48.21 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=28.8
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+..+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 34689999999999999999999997 68887643
No 239
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.09 E-value=0.5 Score=47.04 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=57.0
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++|+|.|+ |.+|..+++.|...|. ++++++.+. . .++..+. .+.. +++ +.+..+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------~---~~~~~~~-~l~~--~~v--~~v~~D 66 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPN---------------S---SKTTLLD-EFQS--LGA--IIVKGE 66 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTT---------------C---SCHHHHH-HHHH--TTC--EEEECC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCC---------------C---chhhHHH-Hhhc--CCC--EEEEec
Confidence 358999996 9999999999999995 577665321 1 1222211 1211 233 445566
Q ss_pred CCCCcchHhhcccccEEEEccCCH--HHHHHHHHHHHhcC-CC
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNL--DARRHVNRLCLAAD-VP 130 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~--~ar~~in~~c~~~~-~p 130 (563)
+.+...-...+++.|+||++.... ..-..+-+.|.+.+ ++
T Consensus 67 l~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 109 (318)
T 2r6j_A 67 LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIK 109 (318)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCC
T ss_pred CCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCC
Confidence 654333346678999999976532 22334445666665 44
No 240
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=92.08 E-value=0.47 Score=46.20 Aligned_cols=35 Identities=34% Similarity=0.530 Sum_probs=29.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678899998 68999999999999996 5777763
No 241
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=92.06 E-value=0.49 Score=48.91 Aligned_cols=76 Identities=12% Similarity=0.142 Sum_probs=53.7
Q ss_pred cCCcEEEECCcHHHHHHHHHHHH-hCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLAL-SGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal-~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
...++.|||+|+.|..+++.|.. .++.++++.|. ...|++.+++.+... +++.+....
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r-------------------~~~~a~~la~~~~~~-~g~~~~~~~- 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT-------------------DPLATAKLIANLKEY-SGLTIRRAS- 186 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS-------------------SHHHHHHHHHHHTTC-TTCEEEECS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC-------------------CHHHHHHHHHHHHhc-cCceEEEeC-
Confidence 46789999999999999999864 47888988762 234677666666442 344444321
Q ss_pred CCCCCcchHhhcccccEEEEccCC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
...+.++++|+|++|+-+
T Consensus 187 ------~~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 ------SVAEAVKGVDIITTVTAD 204 (350)
T ss_dssp ------SHHHHHTTCSEEEECCCC
T ss_pred ------CHHHHHhcCCEEEEeccC
Confidence 124567889999999875
No 242
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=92.03 E-value=0.29 Score=47.86 Aligned_cols=83 Identities=13% Similarity=0.260 Sum_probs=53.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|... -...+.+.+++.++.. +.++..+
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~----------------~~~~~~~~~~~~~~~~--~~~~~~~ 68 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQA----------------KDSDTANKLKDELEDQ--GAKVALY 68 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCG----------------GGHHHHHHHHHHHHTT--TCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCc----------------cCHHHHHHHHHHHHhc--CCcEEEE
Confidence 35678899998 68999999999999997 566665321 1223455555566554 3467777
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|++|++
T Consensus 69 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 98 (262)
T 3ksu_A 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINT 98 (262)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 77775432222232 367888874
No 243
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.97 E-value=0.28 Score=52.47 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=30.5
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTI 47 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~V 47 (563)
+||.|||+|.+|..++..|+..|. +++++|.|.-
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHH
Confidence 689999999999999999999997 7889987653
No 244
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.92 E-value=0.31 Score=47.78 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=28.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGR 38 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677888888 58999999999999996 6777764
No 245
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=91.91 E-value=0.37 Score=46.73 Aligned_cols=34 Identities=32% Similarity=0.470 Sum_probs=28.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4667888887 68999999999999996 6777764
No 246
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=91.90 E-value=0.51 Score=46.48 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=28.9
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 54 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCAR 54 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677899997 68999999999999996 6777764
No 247
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.86 E-value=0.32 Score=52.26 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=56.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
..+|.|||+|.+|..++++|+..|. +++++|.+ ..|++.+.+.. +.-.+....
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~-------------------~~~~~~l~~~~----~~~gi~~~~--- 57 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT-------------------TSKTEEVFKEH----QDKNLVFTK--- 57 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS-------------------HHHHHHHHHHT----TTSCEEECS---
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC-------------------HHHHHHHHHhC----cCCCeEEeC---
Confidence 4689999999999999999999997 57776532 12333333221 111122111
Q ss_pred CCCcchHhhccc---ccEEEEccCC-HHHHHHHHHHHH--hcCCCEEEecc
Q 008516 92 KDPKFNVEFFKQ---FNVVLNGLDN-LDARRHVNRLCL--AADVPLVESGT 136 (563)
Q Consensus 92 ~~~~~~~~~~~~---~dvVi~alDn-~~ar~~in~~c~--~~~~pli~~gt 136 (563)
...++.++ .|+|+.++-. ...+..+.++.. ..+..+|+.++
T Consensus 58 ----s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~ 104 (474)
T 2iz1_A 58 ----TLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGN 104 (474)
T ss_dssp ----SHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSC
T ss_pred ----CHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCC
Confidence 12345554 8999998876 345555554432 23455676553
No 248
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.83 E-value=0.28 Score=49.93 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=30.3
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
..||.|+|+|.+|..++-.|+..|. ++|.++|-|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999886 679999854
No 249
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=91.83 E-value=0.24 Score=48.14 Aligned_cols=97 Identities=12% Similarity=0.209 Sum_probs=57.2
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|+|.|+ |+||..+++.|+..|. +++++|.+.-. .+. + .++.+..++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~--------------------------~--~~~~~~~Dl 51 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLG--AAE--------------------------A--HEEIVACDL 51 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCC--CCC--------------------------T--TEEECCCCT
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCcc--ccC--------------------------C--CccEEEccC
Confidence 47999996 9999999999999884 67776543210 000 1 234455555
Q ss_pred CCCcchHhhcccccEEEEccC-------------CHHHHHHHHHHHHhcCC-CEEEeccccce
Q 008516 92 KDPKFNVEFFKQFNVVLNGLD-------------NLDARRHVNRLCLAADV-PLVESGTTGFL 140 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alD-------------n~~ar~~in~~c~~~~~-pli~~gt~G~~ 140 (563)
++...-.+.+++.|+||++.. |...-..+-+.|...++ .+|..++.+.+
T Consensus 52 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 114 (267)
T 3ay3_A 52 ADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTI 114 (267)
T ss_dssp TCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGS
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHh
Confidence 443223455677888887531 22223445556666664 46666555433
No 250
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.80 E-value=0.22 Score=48.59 Aligned_cols=97 Identities=20% Similarity=0.177 Sum_probs=57.8
Q ss_pred cEEEECC-cHHHHHHHHHHHHh--CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 14 KVLMVGA-GGIGCELLKTLALS--GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 14 ~VlvvGa-GgiG~ellknLal~--Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+|+|.|+ |.+|..+++.|... |. ++++++.+.- +... +.. +. ++.+..+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-------------------~~~~----~~~--~~--~~~~~~D 52 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPA-------------------KAQA----LAA--QG--ITVRQAD 52 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTT-------------------TCHH----HHH--TT--CEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChH-------------------hhhh----hhc--CC--CeEEEcC
Confidence 5899996 99999999999987 75 6777764311 0000 111 22 3445556
Q ss_pred CCCCcchHhhcccccEEEEccC-----CHHHHHHHHHHHHhcCC-CEEEecccc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLD-----NLDARRHVNRLCLAADV-PLVESGTTG 138 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alD-----n~~ar~~in~~c~~~~~-pli~~gt~G 138 (563)
+++...-.+.++++|+||.+.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 53 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~ 106 (286)
T 2zcu_A 53 YGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH 106 (286)
T ss_dssp TTCHHHHHHHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 6543333456788999998643 23334455566666665 466665544
No 251
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=91.77 E-value=0.34 Score=47.51 Aligned_cols=37 Identities=22% Similarity=0.446 Sum_probs=30.3
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 53 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASR 53 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3457788899998 68999999999999996 5777764
No 252
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.76 E-value=0.14 Score=53.09 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=36.7
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCccc---cceeeecccccccccccccCCCCCCCCcccCCCc
Q 008516 374 VHAVATTNAIIAGLIVIEAIKVLLKDTDK---YRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSET 436 (563)
Q Consensus 374 IPAIATTnAiVAGl~vlE~~K~l~~~~~~---~r~~f~~~~~~~~~~~~p~~~~~pn~~C~vC~~~ 436 (563)
.|.+++++++|++++++|++|+|.|..+. -|..-++.. ... ......+++|.|.+|+..
T Consensus 291 ~gv~~~~~~iig~l~a~Ealk~l~g~~~~~~~g~l~~~d~~-~~~---~~~~~~~~~p~C~~Cg~~ 352 (353)
T 3h5n_A 291 PATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSD-EIK---IHSQNMGRSPVCSVCGNR 352 (353)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHCSSCCTTBTEEEEECSS-SSC---EEEEECCCCTTCTTTC--
T ss_pred CCchhhHHHHHHHHHHHHHHHHhcCCCCcccCCeEEEEECC-CCE---EEEEccCCCcCCCCCCCC
Confidence 36688899999999999999999985322 222222211 111 011223578999999853
No 253
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=91.75 E-value=0.56 Score=45.40 Aligned_cols=32 Identities=31% Similarity=0.502 Sum_probs=26.8
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADY 34 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788888 68999999999999996 6777763
No 254
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.72 E-value=0.14 Score=53.88 Aligned_cols=38 Identities=16% Similarity=0.398 Sum_probs=35.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
++...||+|+|+|+.|..+++.|..+|+++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 57889999999999999999999999999999999875
No 255
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.72 E-value=0.47 Score=47.20 Aligned_cols=36 Identities=36% Similarity=0.579 Sum_probs=30.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 80 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLD 80 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788999998 58999999999999997 57777643
No 256
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=91.71 E-value=0.36 Score=47.14 Aligned_cols=35 Identities=31% Similarity=0.519 Sum_probs=26.1
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEE
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHII 42 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~ii 42 (563)
+..+++++|+|.| .||||.++++.|+..|.. +.++
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~-v~i~ 56 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFN-IGVH 56 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 4567788899998 589999999999999985 4443
No 257
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.69 E-value=0.33 Score=47.66 Aligned_cols=36 Identities=28% Similarity=0.549 Sum_probs=30.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 46788899998 58999999999999997 68888754
No 258
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=91.63 E-value=0.32 Score=47.25 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=29.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 36678899998 68999999999999996 5777664
No 259
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=91.62 E-value=0.53 Score=44.94 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=27.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+++++|+|.| .||||.++++.|+..|. ++.++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 5677899998 68999999999999996 677764
No 260
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=91.62 E-value=0.29 Score=49.58 Aligned_cols=34 Identities=15% Similarity=0.294 Sum_probs=30.1
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEe
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALS-GFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD 43 (563)
....+|.|||+|.+|..++++|... |+.++++.|
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~d 167 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWN 167 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEEC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEc
Confidence 3467899999999999999999987 888898876
No 261
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.59 E-value=0.39 Score=46.67 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=26.4
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
.+|.|||+|.+|..+++.|...|. .+.++|
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~-~v~~~~ 33 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPH-ELIISG 33 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSC-EEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC-eEEEEC
Confidence 589999999999999999999883 677766
No 262
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=91.54 E-value=0.41 Score=46.12 Aligned_cols=62 Identities=24% Similarity=0.334 Sum_probs=40.4
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
++++++|.| .||||.++++.|+..|. ++.++|... ..+.+.+++.++... .++..+..
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~------------------~~~~~~~~~~~~~~~--~~~~~~~~ 61 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGS------------------KEKAEAVVEEIKAKG--VDSFAIQA 61 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSC------------------HHHHHHHHHHHHHTT--SCEEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCC------------------HHHHHHHHHHHHhcC--CcEEEEEc
Confidence 456788887 68999999999999997 466655321 134555555555543 34555555
Q ss_pred CCCC
Q 008516 90 NVKD 93 (563)
Q Consensus 90 ~i~~ 93 (563)
++++
T Consensus 62 Dv~d 65 (246)
T 3osu_A 62 NVAD 65 (246)
T ss_dssp CTTC
T ss_pred cCCC
Confidence 5543
No 263
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.53 E-value=0.84 Score=46.10 Aligned_cols=33 Identities=24% Similarity=0.484 Sum_probs=28.4
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
.||.|+|+|.+|+.++..|+..|. .+++++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999998764 469999854
No 264
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=91.52 E-value=0.38 Score=47.63 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=29.5
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r 58 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASR 58 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678899998 58999999999999997 5777764
No 265
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=91.52 E-value=0.49 Score=46.41 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=52.7
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEE-EEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIH-IIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~-iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.||.|+|+|.+|..+++.+...+- .+. ++|.+.-. ..++.+ ..++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~------------------------------~~gv~v---~~dl 49 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKA------------------------------TTPYQQ---YQHI 49 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--------------------------------CCSCB---CSCT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccc------------------------------cCCCce---eCCH
Confidence 689999999999999999998875 554 34533210 011111 1111
Q ss_pred CCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
.++. ++|+||+.+....+...+. .++++|+| .||.|+
T Consensus 50 ------~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vV-igTTG~ 86 (243)
T 3qy9_A 50 ------ADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLV-VATTGE 86 (243)
T ss_dssp ------TTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEE-ECCCSS
T ss_pred ------HHHh-CCCEEEEeCChHHHHHHHH---HhcCCceE-eCCCCC
Confidence 2334 8999999876444444443 78899998 467776
No 266
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.51 E-value=0.4 Score=46.70 Aligned_cols=36 Identities=19% Similarity=0.493 Sum_probs=30.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 68999999999999997 68887743
No 267
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.50 E-value=0.15 Score=50.50 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.0
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++++|+|+||+|..+++.|+..| .+++++|
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~ 149 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITN 149 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEE
Confidence 46789999999999999999999999 6898875
No 268
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.45 E-value=0.28 Score=48.62 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=29.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 61 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADI 61 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778888887 68999999999999997 6888774
No 269
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.45 E-value=0.37 Score=44.72 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=29.1
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
+.++|+|.| .|++|.++++.|+..|. .++++++.+
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 457899999 79999999999999996 477776643
No 270
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=91.44 E-value=0.38 Score=45.94 Aligned_cols=34 Identities=29% Similarity=0.496 Sum_probs=28.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567888887 68999999999999996 6777764
No 271
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=91.43 E-value=0.31 Score=47.67 Aligned_cols=56 Identities=11% Similarity=0.208 Sum_probs=38.4
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchH
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSK 67 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~K 67 (563)
++++++++|.| .||||.++++.|+..|. ++.++|.+.-...+. +..+-.-|+..+.
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~ 81 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP--DIHTVAGDISKPE 81 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST--TEEEEESCTTSHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC--ceEEEEccCCCHH
Confidence 46778888988 58999999999999997 688888654333222 1222344565543
No 272
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=91.40 E-value=0.28 Score=48.60 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=30.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 46788899998 58999999999999996 68888754
No 273
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=91.38 E-value=0.35 Score=49.85 Aligned_cols=90 Identities=18% Similarity=0.227 Sum_probs=53.6
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
.|.+++|.|||+|.+|..+++.|...|+ ++...|...-. ..+ .. .
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~-------------~~~-----------------~~--~-- 212 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS-------------GVD-----------------WI--A-- 212 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT-------------TSC-----------------CE--E--
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc-------------ccC-----------------ce--e--
Confidence 4778999999999999999999998887 67777643210 001 00 0
Q ss_pred cCCCCCcchHhhcccccEEEEccC-CHHHHHHHHHHHH---hcCCCEEEecccc
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLD-NLDARRHVNRLCL---AADVPLVESGTTG 138 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alD-n~~ar~~in~~c~---~~~~pli~~gt~G 138 (563)
. ....+.++++|+|+.++- +.+.+..+++... +.+.-+|+.+..+
T Consensus 213 --~---~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~ 261 (340)
T 4dgs_A 213 --H---QSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGN 261 (340)
T ss_dssp --C---SSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-
T ss_pred --c---CCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 0 113577899999999875 4556666644332 3455677776543
No 274
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=91.36 E-value=0.63 Score=45.62 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=28.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 53 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSR 53 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677899998 68999999999999996 5777764
No 275
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=91.34 E-value=0.27 Score=47.84 Aligned_cols=35 Identities=31% Similarity=0.672 Sum_probs=29.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677899998 68999999999999997 68887754
No 276
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.33 E-value=0.42 Score=47.65 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=29.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~ 81 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYL 81 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788899998 68999999999999997 5667653
No 277
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=91.33 E-value=0.39 Score=47.36 Aligned_cols=36 Identities=17% Similarity=0.346 Sum_probs=27.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 61 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRR 61 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 45667788887 58999999999999997 58887743
No 278
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=91.32 E-value=0.44 Score=45.99 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=29.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+++++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLP 45 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5678899998 68999999999999997 67777643
No 279
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=91.29 E-value=0.48 Score=46.79 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=28.4
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r 55 (288)
T 2x9g_A 18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYH 55 (288)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 3457788888888 68999999999999996 6777763
No 280
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=91.26 E-value=0.69 Score=47.50 Aligned_cols=87 Identities=20% Similarity=0.264 Sum_probs=53.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|.+.-....+. + +.+.+++.+.+.. .++..+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~----------~--~l~~~~~~~~~~g--~~~~~~ 106 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLL----------G--TIYTAAEEIEAVG--GKALPC 106 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSC----------C--CHHHHHHHHHHTT--CEEEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhH----------H--HHHHHHHHHHhcC--CeEEEE
Confidence 46788899998 58999999999999997 6888876543222211 1 1223344444443 456666
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-..+ +.+.|+||++
T Consensus 107 ~~Dv~d~~~v~~~~~~~~~~~g~iDilVnn 136 (346)
T 3kvo_A 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNN 136 (346)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6666543222222 2367877774
No 281
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=91.19 E-value=0.34 Score=47.83 Aligned_cols=33 Identities=33% Similarity=0.514 Sum_probs=27.5
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHh--CCCeEEEEeCC
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALS--GFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~--Gvg~I~iiD~D 45 (563)
+++|+|.|+ |.||..+++.|... |. +++++|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIR 37 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCC
Confidence 478999996 99999999999988 54 67777743
No 282
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.17 E-value=1 Score=45.43 Aligned_cols=116 Identities=19% Similarity=0.286 Sum_probs=62.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC-
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV- 91 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i- 91 (563)
+||-+||+|..|..+++||+..|. .+++.|.+.=....+. +.|-..+...++.++. .++-+......-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~--------~~Ga~~a~s~~e~~~~--~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLV--------AAGASAARSARDAVQG--ADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHH--------HTTCEECSSHHHHHTT--CSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHH--------HcCCEEcCCHHHHHhc--CCceeecCCchHH
Confidence 479999999999999999999997 5777763321111110 0111111112222221 222222222110
Q ss_pred -CC----CcchHhhcccccEEEE-ccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 92 -KD----PKFNVEFFKQFNVVLN-GLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 92 -~~----~~~~~~~~~~~dvVi~-alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
.+ ..--....+.=++||+ ++-+++.-+.+.+.+...++-++|+.+.|.
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg 126 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESC
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 00 0000111233357777 455677777788888888998998877663
No 283
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.17 E-value=0.16 Score=51.25 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=62.2
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
++.||.+||+|-.|..+++||+..|+ ++++.|.+.=....+. ..|-.-+...++.++ ..++-+......
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~--------~~G~~~~~s~~e~~~--~~dvvi~~l~~~ 72 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLT--------KLGATVVENAIDAIT--PGGIVFSVLADD 72 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTT--------TTTCEECSSGGGGCC--TTCEEEECCSSH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHH--------HcCCeEeCCHHHHHh--cCCceeeeccch
Confidence 45789999999999999999999998 5777774432222221 112111111111111 112222222111
Q ss_pred C-CCCcc---hHhhcccccEEEE-ccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 91 V-KDPKF---NVEFFKQFNVVLN-GLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 91 i-~~~~~---~~~~~~~~dvVi~-alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
. .+... .....+.-++||+ ++-+++.-+.+.+.+...++-++++...|.
T Consensus 73 ~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 73 AAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp HHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred hhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 0 00000 1122344457776 445567677778888888888888887763
No 284
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=91.16 E-value=0.55 Score=46.39 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=28.9
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADV 59 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677888888 68999999999999997 6778764
No 285
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.15 E-value=0.75 Score=45.31 Aligned_cols=63 Identities=17% Similarity=0.302 Sum_probs=45.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.|+++.++|-| .+|||-++++.|+..|. ++.++|.+ +.+.+.+++.+++.. .++..+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~-------------------~~~~~~~~~~i~~~g--~~~~~~ 61 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL-------------------EDRLNQIVQELRGMG--KEVLGV 61 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTT--CCEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC-------------------HHHHHHHHHHHHhcC--CcEEEE
Confidence 47888888987 68999999999999997 57777732 245666666776654 355566
Q ss_pred ccCCCC
Q 008516 88 HANVKD 93 (563)
Q Consensus 88 ~~~i~~ 93 (563)
..++++
T Consensus 62 ~~Dvt~ 67 (254)
T 4fn4_A 62 KADVSK 67 (254)
T ss_dssp ECCTTS
T ss_pred EccCCC
Confidence 666643
No 286
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=91.07 E-value=0.44 Score=46.80 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=29.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678888888 68999999999999996 6777764
No 287
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=91.06 E-value=0.68 Score=51.59 Aligned_cols=106 Identities=19% Similarity=0.303 Sum_probs=63.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
.++.++|+|.| .|.||+++++.|+.. |. +++++|...- ++.+ . ....+++.
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~---~~~~-~----------------------~~~~~v~~ 364 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSD---AISR-F----------------------LNHPHFHF 364 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCT---TTGG-G----------------------TTCTTEEE
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCch---hhhh-h----------------------ccCCceEE
Confidence 35667899999 599999999999997 65 6777775421 1111 0 00123555
Q ss_pred eccCCCCCc-chHhhcccccEEEEccC--C---------------HHHHHHHHHHHHhcCCCEEEecccccee
Q 008516 87 HHANVKDPK-FNVEFFKQFNVVLNGLD--N---------------LDARRHVNRLCLAADVPLVESGTTGFLG 141 (563)
Q Consensus 87 ~~~~i~~~~-~~~~~~~~~dvVi~alD--n---------------~~ar~~in~~c~~~~~pli~~gt~G~~G 141 (563)
+..++++.. .-...++++|+||.+.. + ...-..+-+.|...+..+|..++.+.+|
T Consensus 365 v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg 437 (660)
T 1z7e_A 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437 (660)
T ss_dssp EECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred EECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcC
Confidence 566665432 12345678899988421 1 1122344556666677788877766554
No 288
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=91.06 E-value=0.53 Score=45.53 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=30.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~ 42 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRD 42 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35678899998 57999999999999996 58887743
No 289
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.05 E-value=0.18 Score=53.19 Aligned_cols=34 Identities=29% Similarity=0.544 Sum_probs=31.8
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+.+|+|+|+|++|..+++.|...|+++++++|
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~ 198 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVAN 198 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEEC
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEe
Confidence 5789999999999999999999999999999986
No 290
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=91.05 E-value=0.18 Score=50.32 Aligned_cols=68 Identities=21% Similarity=0.317 Sum_probs=48.9
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.+++++|+|+||.|..++..|...|+.+|+|++.+ ..|++.+++.+. ..+. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt-------------------~~ka~~la~~~~-----~~~~---~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN-------------------VKTGQYLAALYG-----YAYI---NS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC-------------------HHHHHHHHHHHT-----CEEE---SC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-------------------HHHHHHHHHHcC-----Cccc---hh
Confidence 35789999999999999999999999999997522 246666665542 1111 11
Q ss_pred CCCCcchHhhcccccEEEEccCC
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn 113 (563)
. . ..++|+||+++..
T Consensus 171 ~-------~-~~~~DivInaTp~ 185 (271)
T 1npy_A 171 L-------E-NQQADILVNVTSI 185 (271)
T ss_dssp C-------T-TCCCSEEEECSST
T ss_pred h-------h-cccCCEEEECCCC
Confidence 1 1 3579999999753
No 291
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=91.05 E-value=0.5 Score=45.45 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=27.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
|++++++|.| .||||.++++.|+..|. ++.++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~ 35 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNY 35 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 3567788887 68999999999999997 566665
No 292
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.04 E-value=0.17 Score=54.10 Aligned_cols=35 Identities=23% Similarity=0.550 Sum_probs=32.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCC--CeEEEEe
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGF--QDIHIID 43 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gv--g~I~iiD 43 (563)
.+.+.+|+|+|+||.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3678899999999999999999999999 8999998
No 293
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=91.03 E-value=0.5 Score=45.75 Aligned_cols=33 Identities=33% Similarity=0.586 Sum_probs=27.6
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD 43 (563)
|.+++++|.|+ ||||.++++.|+..|. ++.++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~ 35 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNG 35 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 45678888884 8999999999999997 577765
No 294
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.00 E-value=0.41 Score=47.92 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=29.0
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 4689999999999999999999996 68887744
No 295
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=90.99 E-value=1 Score=44.10 Aligned_cols=92 Identities=21% Similarity=0.204 Sum_probs=53.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+.-.. . .....-...+.+...+.+.+.. .++..+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 76 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSD--V-----VGYPLATADDLAETVALVEKTG--RRCISA 76 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCT--T-----CSSCCCCHHHHHHHHHHHHHTT--CCEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCcccc--c-----cccccccHHHHHHHHHHHHhcC--CeEEEE
Confidence 57788999998 68999999999999997 588888542110 0 0000112233444444455443 356666
Q ss_pred ccCCCCCcchHhhc-------ccccEEEEc
Q 008516 88 HANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
..++++...-..++ .+.|++|++
T Consensus 77 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 106 (281)
T 3s55_A 77 KVDVKDRAALESFVAEAEDTLGGIDIAITN 106 (281)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 66665432222222 356777764
No 296
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=90.96 E-value=0.37 Score=46.76 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=29.3
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
|++++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 38 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVL 38 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999985 8999999999999997 57777643
No 297
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.96 E-value=0.37 Score=48.99 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=59.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
+.+|+|+|+|.+|..+++.|...|. ++++|.|. .+.+ ++ + ++ +..+.++.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~-------------------~~~~-~~----~--~~--~~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK-VL----R--SG--ANFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG-------------------GHHH-HH----H--TT--CEEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh-------------------hhhh-HH----h--CC--cEEEEeCC
Confidence 4589999999999999999999887 88887553 1222 22 1 22 34455555
Q ss_pred CCCcch-HhhcccccEEEEccCCHHHHHHHHHHHHhcCC
Q 008516 92 KDPKFN-VEFFKQFNVVLNGLDNLDARRHVNRLCLAADV 129 (563)
Q Consensus 92 ~~~~~~-~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~ 129 (563)
++...- ..-++++|.|+.++++.+.-..+-..+++.+.
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 433221 12267899999999887766666667776654
No 298
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=90.90 E-value=0.59 Score=44.86 Aligned_cols=33 Identities=18% Similarity=0.404 Sum_probs=27.3
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r 35 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGR 35 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 356788998 58999999999999997 5777764
No 299
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=90.90 E-value=0.55 Score=46.50 Aligned_cols=32 Identities=34% Similarity=0.531 Sum_probs=25.5
Q ss_pred cEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCC
Q 008516 14 KVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMD 45 (563)
Q Consensus 14 ~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D 45 (563)
+|+|.| .|.||..+++.|+.. |-.+++++|..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 34 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIV 34 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESS
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCC
Confidence 589999 599999999999988 32367777743
No 300
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=90.90 E-value=0.52 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=28.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGR 37 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5667788887 68999999999999996 6777763
No 301
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=90.89 E-value=0.5 Score=47.04 Aligned_cols=34 Identities=32% Similarity=0.504 Sum_probs=28.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 66 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDI 66 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899998 78999999999999997 5777663
No 302
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.89 E-value=0.31 Score=46.41 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=29.0
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
++++|+|.| .||||.++++.|+..|- .++.++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 456788887 68999999999999994 578888754
No 303
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=90.87 E-value=0.79 Score=44.39 Aligned_cols=32 Identities=38% Similarity=0.667 Sum_probs=26.7
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADL 34 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788887 68999999999999997 5777763
No 304
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.86 E-value=0.48 Score=46.60 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=28.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGR 38 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677888887 68999999999999997 6777764
No 305
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=90.85 E-value=0.64 Score=44.43 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=27.1
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDL 34 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 46789998 58999999999999996 6888764
No 306
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.85 E-value=0.55 Score=46.08 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=27.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+++++++|.| .||||.++++.|+..|. ++.++|
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~ 59 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA-KVAVNY 59 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 5677788888 58999999999999997 466655
No 307
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=90.85 E-value=0.76 Score=46.75 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=51.9
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
...+++|||+|++|...++.|... ++.++.+.|. ...|++.+++.+.... +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r-------------------~~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV-------------------REKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS-------------------SHHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC-------------------CHHHHHHHHHHHHhcC--ceEE-E-C
Confidence 457899999999999999999874 6888888762 2357777777665421 2332 2 1
Q ss_pred CCCCCcchHhhcccccEEEEccCC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn 113 (563)
+ ..+.+ ++|+|++|+-+
T Consensus 181 ~------~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 P------AEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp C------HHHHT-SSSEEEECCCC
T ss_pred C------HHHHh-CCCEEEEeeCC
Confidence 1 23456 89999999875
No 308
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.83 E-value=0.35 Score=47.65 Aligned_cols=32 Identities=31% Similarity=0.558 Sum_probs=27.5
Q ss_pred cEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 14 KVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 14 ~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+|+|.|+ |.||..+++.|...|..+++++|..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899996 9999999999999996678887754
No 309
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.83 E-value=0.39 Score=49.67 Aligned_cols=89 Identities=13% Similarity=0.193 Sum_probs=52.6
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHH--hhCCCceEEEecc
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVL--KFRPQMSITAHHA 89 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~--~~np~v~I~~~~~ 89 (563)
..||.|+|+|.+|+.++..|+..|. +++++|.+.- +++.+.+.-. ..-|++.+ ..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~-------------------~~~~i~~~~~~~~~l~g~~l---~~ 85 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESD-------------------HVDEMQAEGVNNRYLPNYPF---PE 85 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHH-------------------HHHHHHHHSSBTTTBTTCCC---CT
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHH-------------------HHHHHHHcCCCcccCCCCcc---CC
Confidence 4689999999999999999999996 5888775421 2222222100 01122221 11
Q ss_pred CCCCCcchHhhcccccEEEEccCCHHHHHHHHHH
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRL 123 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~ 123 (563)
++.-.....+.++++|+||.++-....+..+.++
T Consensus 86 ~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i 119 (356)
T 3k96_A 86 TLKAYCDLKASLEGVTDILIVVPSFAFHEVITRM 119 (356)
T ss_dssp TEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHH
T ss_pred CeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHH
Confidence 1100011234578899999999766555555544
No 310
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.81 E-value=0.36 Score=49.14 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=50.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
.++++|||+|.+|...++.|... ++.+|++.|.+ |++..++.+.+.. ++.+... +
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~--~ 176 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA--A 176 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--C
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--C
Confidence 56899999999999999999874 78899997643 3344445444321 3444433 2
Q ss_pred CCCCcchHhhcccccEEEEccCC
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDN 113 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn 113 (563)
..+.++++|+|+.|+-.
T Consensus 177 ------~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 177 ------PADIAAQADIVVTATRS 193 (313)
T ss_dssp ------HHHHHHHCSEEEECCCC
T ss_pred ------HHHHHhhCCEEEEccCC
Confidence 24567899999999864
No 311
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.79 E-value=0.35 Score=46.22 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=25.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEE
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHI 41 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~i 41 (563)
-.||.|||+|.+|..+++.|+..|. ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~ 51 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAII 51 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEE
Confidence 4689999999999999999999997 4555
No 312
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.75 E-value=0.39 Score=47.56 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=26.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGR 65 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 46778888888 58999999999999997 5777764
No 313
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.75 E-value=0.66 Score=47.03 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=26.8
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR 34 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 5799999 59999999999999995 78887643
No 314
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=90.75 E-value=0.63 Score=45.31 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=29.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDIL 40 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 6678899998 68999999999999997 67777643
No 315
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=90.73 E-value=0.72 Score=45.99 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=60.0
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
...||.|+| +|.+|.++++.+... ++.-+-++|...-. +.-.|+|. .+ .+.+++.+
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~---------~~G~d~ge----l~-----g~~~gv~v---- 63 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP---------QLGQDAGA----FL-----GKQTGVAL---- 63 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT---------TTTSBTTT----TT-----TCCCSCBC----
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc---------cccccHHH----Hh-----CCCCCcee----
Confidence 346899999 899999999999865 33223334432100 01123331 11 12222221
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
.. .-++.+.++|+||+++. +++-...-+.|.++++|+|- ||.|+
T Consensus 64 ---~~--dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVi-gTTG~ 107 (272)
T 4f3y_A 64 ---TD--DIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVI-GTTGF 107 (272)
T ss_dssp ---BC--CHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred ---cC--CHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 11 12455678999999985 55555666789999999885 66675
No 316
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=90.72 E-value=0.59 Score=44.51 Aligned_cols=28 Identities=25% Similarity=0.496 Sum_probs=23.3
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEE
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHI 41 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~i 41 (563)
++|+|.| .||||.++++.|+..|. ++.+
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~-~v~~ 30 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGC-KVLV 30 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC-EEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEE
Confidence 5678887 68999999999999997 4555
No 317
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=90.67 E-value=0.56 Score=46.25 Aligned_cols=33 Identities=33% Similarity=0.352 Sum_probs=27.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++|+|.| .||||.++++.|+..|. ++.+++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~ 75 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS-HVICIS 75 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEc
Confidence 4567899998 68999999999999986 566665
No 318
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=90.61 E-value=0.84 Score=45.94 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=58.6
Q ss_pred HHHHHHcC-CcEEEEC-CcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC-C
Q 008516 5 RQLEAIKG-AKVLMVG-AGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR-P 80 (563)
Q Consensus 5 ~~q~kL~~-~~VlvvG-aGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n-p 80 (563)
|.|..+.. .||.|+| +|.+|..+++.+... ++.-+-++|...- . +.-.|+|. . ..+. .
T Consensus 13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~---~------~~G~d~ge----l-----~G~~~~ 74 (288)
T 3ijp_A 13 EAQTQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS---S------FVDKDASI----L-----IGSDFL 74 (288)
T ss_dssp --------CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC---T------TTTSBGGG----G-----TTCSCC
T ss_pred hhhhhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc---c------ccccchHH----h-----hccCcC
Confidence 44444433 5899999 899999999988754 3333334343210 0 11223331 0 0011 1
Q ss_pred CceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 81 QMSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 81 ~v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
++.+ .. .-++.+.++|+||+.+. +++-...-+.|.++++|+| .||+|+
T Consensus 75 gv~v-------~~--dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vV-iGTTG~ 122 (288)
T 3ijp_A 75 GVRI-------TD--DPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHI-IGTTGF 122 (288)
T ss_dssp SCBC-------BS--CHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred Ccee-------eC--CHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 1111 11 12456778999999884 5555556678999999999 566675
No 319
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=90.55 E-value=0.87 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=27.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 40 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 40 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEc
Confidence 46777888887 78999999999999997 677776
No 320
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.52 E-value=0.24 Score=49.86 Aligned_cols=35 Identities=31% Similarity=0.542 Sum_probs=29.9
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D 45 (563)
...||.|+|+|++|+.++..|+..|. ++++++|.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999995 479998854
No 321
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.51 E-value=0.17 Score=50.29 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=50.7
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
++.++++|+|+||+|..++..|+..| .+++++|.+ ..|++.+++.+.... .+....
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~-------------------~~~a~~l~~~~~~~~---~~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRT-------------------FSKTKELAERFQPYG---NIQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESS-------------------HHHHHHHHHHHGGGS---CEEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECC-------------------HHHHHHHHHHccccC---CeEEee-
Confidence 46789999999999999999999999 799998633 246666666654321 222211
Q ss_pred CCCCCcchHhhc-ccccEEEEccCCH
Q 008516 90 NVKDPKFNVEFF-KQFNVVLNGLDNL 114 (563)
Q Consensus 90 ~i~~~~~~~~~~-~~~dvVi~alDn~ 114 (563)
+ .+.- .++|+||+++...
T Consensus 173 -~------~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 173 -M------DSIPLQTYDLVINATSAG 191 (272)
T ss_dssp -G------GGCCCSCCSEEEECCCC-
T ss_pred -H------HHhccCCCCEEEECCCCC
Confidence 1 0111 3899999998643
No 322
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=90.49 E-value=0.57 Score=46.18 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=28.6
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 61 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICAR 61 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677899998 58999999999999996 5777764
No 323
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=90.49 E-value=0.91 Score=44.65 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=28.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
|++++++|.| .||||.++++.|+..|. ++.++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 62 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWG 62 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEc
Confidence 5677899998 68999999999999998 577776
No 324
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.41 E-value=0.89 Score=49.21 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=29.6
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+|.|||+|.+|+.++.+|+..|. ++++.|.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~ 42 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRT 42 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56789999999999999999999997 57887643
No 325
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=90.38 E-value=0.47 Score=46.81 Aligned_cols=35 Identities=14% Similarity=0.410 Sum_probs=26.9
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..|. ++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r 53 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW-SLVLTGR 53 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4566 6788887 68999999999999996 5777764
No 326
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.37 E-value=0.25 Score=48.49 Aligned_cols=57 Identities=21% Similarity=0.290 Sum_probs=37.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCcccc--ceeeecccccccccccccCCCCCCCCcccCC
Q 008516 374 VHAVATTNAIIAGLIVIEAIKVLLKDTDKY--RMTYCLEHITKKMLLMPVEPYEPNKSCYVCS 434 (563)
Q Consensus 374 IPAIATTnAiVAGl~vlE~~K~l~~~~~~~--r~~f~~~~~~~~~~~~p~~~~~pn~~C~vC~ 434 (563)
.+.++.++++++++++.|++|+|.|..+.. +..+++..... +.... -+++|.|++|+
T Consensus 190 ~g~~~~~~~~~g~~~a~e~lk~l~g~~~~~~~~~~~~d~~~~~---~~~~~-~~~~~~C~~C~ 248 (249)
T 1jw9_B 190 AGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQ---FREMK-LMRNPGCEVCG 248 (249)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHTCSCCCBSEEEEEETTTTE---EEEEE-CCCCTTCTTTC
T ss_pred cCCcchHHHHHHHHHHHHHHHHHhCCCCCccCeEEEEECCCCE---EEEEe-cCCCcCCCCcC
Confidence 356778999999999999999999865432 33333322111 11122 24789999997
No 327
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=90.36 E-value=0.62 Score=47.75 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=26.7
Q ss_pred HHcCCcEEEECCcHHHH-HHHHHHHHh-CCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGC-ELLKTLALS-GFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~-ellknLal~-Gvg~I~iiD~D 45 (563)
.++..||.|||+|.+|. ..+..|... |+.-+.+.|.+
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~ 62 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR 62 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 34567899999999999 799999887 54333466643
No 328
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.29 E-value=1 Score=44.35 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=56.1
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
...+|.|||+|.+|..+++.|+..|.+ +++++|.+. .+.+.+. +.. ..... ..
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~~~----~~g--~~~~~-~~ 58 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD-------------------RSRDIAL----ERG--IVDEA-TA 58 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH-------------------HHHHHHH----HTT--SCSEE-ES
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH-------------------HHHHHHH----HcC--Ccccc-cC
Confidence 346899999999999999999999753 577766321 2222221 111 10001 11
Q ss_pred CCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHh---cCCCEEEec
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLA---ADVPLVESG 135 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~---~~~pli~~g 135 (563)
+ ..+.+++.|+|+.|+-....+..+.++... .+..+++.+
T Consensus 59 ~------~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi~~~ 101 (290)
T 3b1f_A 59 D------FKVFAALADVIILAVPIKKTIDFIKILADLDLKEDVIITDAG 101 (290)
T ss_dssp C------TTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCEEECCC
T ss_pred C------HHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEEECC
Confidence 1 123467899999999876666666665322 244555543
No 329
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=90.25 E-value=1.2 Score=44.17 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=27.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.-..++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~ 45 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRN 45 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 34567788887 69999999999999996 78887754
No 330
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.24 E-value=0.47 Score=45.99 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=31.2
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..|++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 457888999998 58999999999999998 68887743
No 331
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.22 E-value=1.1 Score=47.91 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=70.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.++|+|+|.|-+|..+++.|-. + .++.+|+.| +.|++.+++.+ |++. ..+++.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d-------------------~~r~~~la~~l----~~~~--Vi~GD~ 287 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERN-------------------LQRAEKLSEEL----ENTI--VFCGDA 287 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESC-------------------HHHHHHHHHHC----TTSE--EEESCT
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c-CceEEEecC-------------------HHHHHHHHHHC----CCce--EEeccc
Confidence 4689999999999999999854 3 478888644 34666555543 4443 344555
Q ss_pred CCC-cchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEe
Q 008516 92 KDP-KFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVES 134 (563)
Q Consensus 92 ~~~-~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~ 134 (563)
++. ...++-+.++|+++.++++.+.-.....++++.|++-+-+
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 432 3345567899999999999999988899999988875544
No 332
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.21 E-value=0.64 Score=45.37 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=29.6
Q ss_pred HcCCcEEEECCc---HHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAG---GIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaG---giG~ellknLal~Gvg~I~iiD~ 44 (563)
|+++.++|-|++ |||-++++.|+..|. ++.++|.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r 40 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYR 40 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEEC
Confidence 678899999974 899999999999997 6888774
No 333
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=90.21 E-value=0.91 Score=45.19 Aligned_cols=36 Identities=36% Similarity=0.456 Sum_probs=30.3
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+|+++.++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~ 61 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVC 61 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 46778899998 58999999999999997 57777754
No 334
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=90.15 E-value=1.1 Score=50.00 Aligned_cols=37 Identities=30% Similarity=0.403 Sum_probs=28.0
Q ss_pred HHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 7 LEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 7 q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...+++++|+|.| .|+||..+++.|+..|. +++++|.
T Consensus 6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 6 QSESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 3456788999998 59999999999999995 6777764
No 335
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.14 E-value=0.29 Score=44.45 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.+|+|||+|.+|++++..|+..|. +++++|...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 379999999999999999999997 799998754
No 336
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.31 Score=51.28 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=57.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCC-------eEEEEeCCccCcccCccccCCCCCCC-CchHHHHHHHHHHh--hC---
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQ-------DIHIIDMDTIEVSNLNRQFLFRQSHV-GQSKAKVARDAVLK--FR--- 79 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg-------~I~iiD~D~Ve~sNLnRqfLf~~~di-Gk~Ka~va~~~l~~--~n--- 79 (563)
.||.|+|+|+.|+.+++.|+..|-+ .+++.-. ++++ ++.-++ .+.+ .|
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r---------------~~e~~~~~~~e----~in~~~~N~~Y 95 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVF---------------EEEINGEKLTE----IINTRHQNVKY 95 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECC---------------CCBSSSCBHHH----HHTTTCCBTTT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEc---------------chHhhhHHHHH----HHHhcCcCccc
Confidence 3899999999999999999998732 3555422 2221 221111 1211 11
Q ss_pred -CCceEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHH--hcCCCEEEe
Q 008516 80 -PQMSITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCL--AADVPLVES 134 (563)
Q Consensus 80 -p~v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~--~~~~pli~~ 134 (563)
|++++ +.++.-...-.+.+++.|+||.++-+...|..+.++.- ..+.++|.+
T Consensus 96 Lpgv~L---p~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~ 150 (391)
T 4fgw_A 96 LPGITL---PDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISC 150 (391)
T ss_dssp BTTCCC---CSSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEEC
T ss_pred CCCCcC---CCCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEe
Confidence 33322 11111001124567899999999998888888777632 234455544
No 337
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=90.12 E-value=0.92 Score=45.64 Aligned_cols=92 Identities=24% Similarity=0.294 Sum_probs=54.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAH 87 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~ 87 (563)
+|.+++++|.| .||||.++++.|+..|. ++.++|.+.-. .++.. . .-...+.+.+.+.+.... .++..+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~-~~~~~----~--~~~~~~~~~~~~~~~~~~--~~~~~~ 112 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQ-PNLDY----A--QGSPEELKETVRLVEEQG--RRIIAR 112 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCC-TTCCS----C--CCCHHHHHHHHHHHHHTT--CCEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEeccccc-ccccc----c--ccCHHHHHHHHHHHHhcC--CeEEEE
Confidence 46677888887 68999999999999997 67787754311 11110 0 001233344444454443 456667
Q ss_pred ccCCCCCcchHhh-------cccccEEEEc
Q 008516 88 HANVKDPKFNVEF-------FKQFNVVLNG 110 (563)
Q Consensus 88 ~~~i~~~~~~~~~-------~~~~dvVi~a 110 (563)
..++++...-..+ +.+.|+||++
T Consensus 113 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 142 (317)
T 3oec_A 113 QADVRDLASLQAVVDEALAEFGHIDILVSN 142 (317)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 7777543222222 2367888874
No 338
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.12 E-value=0.26 Score=49.33 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=31.5
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|.+++|+|+|+|++|..+++.|...|. +++++|.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr 186 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGAR 186 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3678999999999999999999999998 8888874
No 339
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.07 E-value=0.58 Score=46.71 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=28.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 58 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGR 58 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5567788887 68999999999999997 5777764
No 340
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.06 E-value=0.26 Score=49.85 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=28.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||+|+|+|++|+.++..|+..|. .++++|.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4689999999999999999999995 78888754
No 341
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.01 E-value=1.3 Score=48.34 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=63.5
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVK 92 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i~ 92 (563)
.+++|+|+|.+|..+++.|...|. .++++|.|.-....+. ..+.++.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~-------------------------------~~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH-------------------------------VVVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS-------------------------------CEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC-------------------------------CEEEeCCC
Confidence 789999999999999999999997 5899997754322210 23344443
Q ss_pred CC-cchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCC
Q 008516 93 DP-KFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVP 130 (563)
Q Consensus 93 ~~-~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~p 130 (563)
+. .....-++++|.||.++++.+.-..+...+++.+.+
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 22 233445789999999999988888888888887754
No 342
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=89.94 E-value=1.4 Score=44.46 Aligned_cols=31 Identities=26% Similarity=0.376 Sum_probs=25.9
Q ss_pred cEEEECC-cHHHHHHHHHHHHh-CCCeEEEEeCC
Q 008516 14 KVLMVGA-GGIGCELLKTLALS-GFQDIHIIDMD 45 (563)
Q Consensus 14 ~VlvvGa-GgiG~ellknLal~-Gvg~I~iiD~D 45 (563)
||+|.|+ |+||..+++.|+.. |. +++++|..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~-~V~~~~r~ 34 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKL 34 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCC-eEEEEecC
Confidence 6999995 99999999999997 54 67777753
No 343
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.92 E-value=0.17 Score=51.16 Aligned_cols=61 Identities=23% Similarity=0.362 Sum_probs=39.3
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCccccceeeecccccccccccccCCCCCCCCcc--cCCC
Q 008516 371 GNIVHAVATTNAIIAGLIVIEAIKVLLKDTDKYRMTYCLEHITKKMLLMPVEPYEPNKSCY--VCSE 435 (563)
Q Consensus 371 GnIIPAIATTnAiVAGl~vlE~~K~l~~~~~~~r~~f~~~~~~~~~~~~p~~~~~pn~~C~--vC~~ 435 (563)
|..-+++++|.++|++++++|++|+|.|..+.-|...++.. .. -+ ..-.-.|+|.|. +|+.
T Consensus 211 gvc~~~l~~~~g~vgslqA~EalK~L~g~g~~~~ll~~D~~-~~--~~-~~~~~~~~p~C~~~~Cg~ 273 (292)
T 3h8v_A 211 GVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAM-QD--FF-PTMSMKPNPQCDDRNCRK 273 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCSEEEEETT-TT--BC-CEECCCCCTTCSCHHHHH
T ss_pred CcccCCcchHHHHHHHHHHHHHHHHHhCCCCCCeEEEEECC-CC--cE-EEEecCCCcCcCccccCC
Confidence 43335689999999999999999999986543332222211 10 11 112235799998 9984
No 344
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.92 E-value=0.23 Score=49.64 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=29.4
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||+|+|+|++|+.++..|+..|. +++++|.+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 4689999999999999999999995 78898865
No 345
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=89.90 E-value=0.56 Score=44.87 Aligned_cols=36 Identities=19% Similarity=0.383 Sum_probs=29.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36678899998 68999999999999996 57777643
No 346
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=89.82 E-value=1.7 Score=43.43 Aligned_cols=30 Identities=37% Similarity=0.579 Sum_probs=25.5
Q ss_pred cEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 14 KVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 14 ~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+|+|.| .|+||..+++.|+..|. +++++|.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~~ 32 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEec
Confidence 789998 59999999999999996 5777663
No 347
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=89.81 E-value=1 Score=45.31 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=47.9
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCC-eEEEEeC--CccCcccCccccCCCCCCCCchHHHHHHHHHHh---hCCCceEE
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQ-DIHIIDM--DTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLK---FRPQMSIT 85 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg-~I~iiD~--D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~---~np~v~I~ 85 (563)
.||+|+| +|.+|..++..|+..|.. ++.++|. +. .|++..+.-+.+ ....+++.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~-------------------~~~~~~~~dl~~~~~~~~~~~v~ 61 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE-------------------DDTVGQAADTNHGIAYDSNTRVR 61 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH-------------------HHHHHHHHHHHHHHTTTCCCEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh-------------------hhHHHHHHHHHHHHhhCCCcEEE
Confidence 4899999 999999999999988864 5888874 21 122222223332 34566666
Q ss_pred EeccCCCCCcchHhhcccccEEEEccC
Q 008516 86 AHHANVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~dvVi~alD 112 (563)
. +. .+.++++|+||.+..
T Consensus 62 ~--~~-------~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 62 Q--GG-------YEDTAGSDVVVITAG 79 (303)
T ss_dssp E--CC-------GGGGTTCSEEEECCC
T ss_pred e--CC-------HHHhCCCCEEEEcCC
Confidence 5 11 244889999998754
No 348
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=89.81 E-value=0.6 Score=45.78 Aligned_cols=35 Identities=31% Similarity=0.659 Sum_probs=29.7
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r 62 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADL 62 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778899998 58999999999999997 5777764
No 349
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.79 E-value=0.61 Score=45.64 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=28.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~ 49 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNY 49 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 46778888888 57999999999999997 566655
No 350
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=89.75 E-value=1 Score=45.57 Aligned_cols=32 Identities=34% Similarity=0.530 Sum_probs=27.8
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCC-CeEEEEeC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGF-QDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gv-g~I~iiD~ 44 (563)
.||+|+|+ |.+|..++..|+..|. .++.++|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 38999999 9999999999998886 45888884
No 351
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=89.74 E-value=0.62 Score=48.24 Aligned_cols=93 Identities=17% Similarity=0.225 Sum_probs=60.3
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.||.||| .|.+|.|+++.|.....-+|..+ ...+..|++=. +..|... ..-.+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l---------------~S~~~aG~~~~--------~~~p~~~---~~l~~ 67 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYL---------------SSRTYAGKKLE--------EIFPSTL---ENSIL 67 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEE---------------ECSTTTTSBHH--------HHCGGGC---CCCBC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEE---------------eCcccccCChH--------HhChhhc---cCceE
Confidence 4799998 58999999999998765555553 23455676433 3334433 11111
Q ss_pred CCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 92 KDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 92 ~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
.+ ....+++++.|+|+.|+.+-.++.+..+. .+..+||.+
T Consensus 68 ~~-~~~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 68 SE-FDPEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp BC-CCHHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred Ee-CCHHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 11 11244568899999999988888877665 566667654
No 352
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=89.70 E-value=0.67 Score=44.79 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=28.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 41 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA-KVIGTAT 41 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677888888 68999999999999997 5777764
No 353
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.66 E-value=0.29 Score=49.10 Aligned_cols=36 Identities=25% Similarity=0.475 Sum_probs=31.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.|.+++|+|+|+|++|..+++.|...|. +++++|.+
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3678899999999999999999999997 78888743
No 354
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=89.66 E-value=0.93 Score=45.93 Aligned_cols=84 Identities=13% Similarity=0.163 Sum_probs=52.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+.+++++|.| .||||.++++.|+..|. ++.+++.+.. +....+.+.+++.+.... .++..+.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~--------------~r~~~~~~~l~~~~~~~~--~~~~~~~ 65 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIV--------------GRNASNVEAIAGFARDND--VDLRTLE 65 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTT--------------TTTHHHHHHHHHHHHHHT--CCEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCccc--------------ccCHHHHHHHHHHHHhcC--CcEEEEE
Confidence 4567788888 59999999999999997 4666554322 122345555666665554 3566666
Q ss_pred cCCCCCcchHhhc-------ccccEEEEc
Q 008516 89 ANVKDPKFNVEFF-------KQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~-------~~~dvVi~a 110 (563)
.++++...-.+++ .+.|+||++
T Consensus 66 ~Dvtd~~~v~~~~~~~~~~~g~iD~lVnn 94 (324)
T 3u9l_A 66 LDVQSQVSVDRAIDQIIGEDGRIDVLIHN 94 (324)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6775432222333 367888875
No 355
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=89.66 E-value=0.65 Score=45.04 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=27.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 36 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGF 36 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeC
Confidence 3567788887 68999999999999997 5777653
No 356
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=89.64 E-value=0.51 Score=46.14 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=28.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 66 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYN 66 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5677888887 68999999999999996 5777764
No 357
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=89.63 E-value=0.54 Score=45.12 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=29.8
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788899998 68999999999999996 5778764
No 358
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=89.60 E-value=0.38 Score=51.55 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=59.2
Q ss_pred cCCcEEEECCcHH--HHHHHHHHHHhC--CCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 11 KGAKVLMVGAGGI--GCELLKTLALSG--FQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 11 ~~~~VlvvGaGgi--G~ellknLal~G--vg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
++.||.|+|+|++ |..++..|+... .|+|+++|.|. .-+.+ ....++.+.+ ...+|++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~---e~le~-------------~~~~~~~l~~--~~~~I~~ 65 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDF---EAAQK-------------NEVIGNHSGN--GRWRYEA 65 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSH---HHHHH-------------HHHHHTTSTT--SCEEEEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCH---HHHHH-------------HHHHHHHHhc--cCCeEEE
Confidence 5679999999996 789999998732 24899988543 11111 1111111111 3345544
Q ss_pred eccCCCCCcchHhhcccccEEEEcc--CCHHHHHHHHHHHHhcCC
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGL--DNLDARRHVNRLCLAADV 129 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~al--Dn~~ar~~in~~c~~~~~ 129 (563)
..+ -.+-++++|+||.+. ...++|..=-++.+++|+
T Consensus 66 TtD-------~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 66 VST-------LKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp ESS-------HHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred ECC-------HHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 221 235689999999987 667888766666777776
No 359
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=89.55 E-value=0.66 Score=45.15 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=28.0
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEE
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHII 42 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~ii 42 (563)
+|++++++|.| .||||.++++.|+..|. ++.++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~ 38 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLT 38 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEE
Confidence 46788999998 57999999999999997 46665
No 360
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=89.53 E-value=0.31 Score=49.83 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.0
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.||+|||+|..|..+|-.|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4799999999999999999999999 68998854
No 361
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=89.53 E-value=1 Score=43.39 Aligned_cols=31 Identities=23% Similarity=0.459 Sum_probs=25.8
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.| .|++|..+++.|+ .| .+++++|.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~ 32 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ER-HEVIKVYNS 32 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TT-SCEEEEESS
T ss_pred CEEEEECCCChhHHHHHHHHh-cC-CeEEEecCC
Confidence 3799999 5999999999999 48 578888754
No 362
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.51 E-value=1.5 Score=47.06 Aligned_cols=31 Identities=19% Similarity=0.405 Sum_probs=27.7
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
++|.|||+|.+|..++.+|+..|. +++++|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeC
Confidence 589999999999999999999997 5788763
No 363
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=89.48 E-value=0.57 Score=45.77 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=31.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.|++++++|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~ 42 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHD 42 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 46778899998 68999999999999997 688887653
No 364
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.48 E-value=0.3 Score=49.80 Aligned_cols=31 Identities=35% Similarity=0.551 Sum_probs=28.1
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
..||.|||+|++|+.++..|+..|. .++++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~ 33 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLA 33 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEE
Confidence 5799999999999999999999996 688876
No 365
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.45 E-value=0.42 Score=49.45 Aligned_cols=90 Identities=11% Similarity=0.163 Sum_probs=52.9
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCC------CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHH--hhCCCce-
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGF------QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVL--KFRPQMS- 83 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gv------g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~--~~np~v~- 83 (563)
.||.|||+|.+|+.++..|+..|. .+++++|.+.- .-++.+++.+.+.-. ..-|+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~--------------~~~~~~~~~l~~~~~~~~~~~~~~~ 87 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF--------------VNGERMVDIINNKHENTKYLKGVPL 87 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC-----------------CCHHHHHHHHCBCTTTSTTCBC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh--------------hhhHHHHHHHHhcCcccccCCcccC
Confidence 489999999999999999999992 36888875421 012334544433210 0112211
Q ss_pred ---EEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHH
Q 008516 84 ---ITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRL 123 (563)
Q Consensus 84 ---I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~ 123 (563)
+.+.. ...+..+++|+||.++-....+..+.++
T Consensus 88 ~~~i~~~~-------~~~ea~~~aDvVilav~~~~~~~vl~~i 123 (375)
T 1yj8_A 88 PHNIVAHS-------DLASVINDADLLIFIVPCQYLESVLASI 123 (375)
T ss_dssp CTTEEEES-------STHHHHTTCSEEEECCCHHHHHHHHHHH
T ss_pred cCCeEEEC-------CHHHHHcCCCEEEEcCCHHHHHHHHHHH
Confidence 11111 1134567899999999765455544443
No 366
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=89.42 E-value=0.54 Score=45.54 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=29.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 40 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLK 40 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5678889998 58999999999999997 57777744
No 367
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.42 E-value=0.25 Score=49.84 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=27.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||+|+|+|++|+.++..|+..|. .++++|.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 3689999999999999999999996 68887643
No 368
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.40 E-value=1.2 Score=48.05 Aligned_cols=93 Identities=15% Similarity=0.218 Sum_probs=60.7
Q ss_pred CCcEEEECCcHH-HHHHHHHHHHh--CC--CeEEEEeCCccCcccCccccCCCCCCCCchHHHHH----HHHHHhhCCCc
Q 008516 12 GAKVLMVGAGGI-GCELLKTLALS--GF--QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVA----RDAVLKFRPQM 82 (563)
Q Consensus 12 ~~~VlvvGaGgi-G~ellknLal~--Gv--g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va----~~~l~~~np~v 82 (563)
+.||.|||+|++ |..++..|+.. ++ .+|.++|.|. .|++.+ ...+.......
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~~ 88 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPDI 88 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCCC
Confidence 459999999998 77788888887 66 4699988433 222222 22223445556
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCC--HHHHHHHHHHHHhcCCC
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDN--LDARRHVNRLCLAADVP 130 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn--~~ar~~in~~c~~~~~p 130 (563)
+|.+..+ -.+-++++|+||.+... .+.|..-..+..++++-
T Consensus 89 ~I~~t~D-------~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~ 131 (472)
T 1u8x_X 89 EFAATTD-------PEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVV 131 (472)
T ss_dssp EEEEESC-------HHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCC
T ss_pred EEEEECC-------HHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcc
Confidence 7766421 12457899999998765 33455556667788774
No 369
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=89.38 E-value=0.82 Score=44.81 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=29.4
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 49 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARR 49 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 46778899998 58999999999999997 57887765
No 370
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.36 E-value=0.21 Score=49.96 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=29.4
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++++|+|+||+|..+++.|+..| +++++|
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~ 157 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIAN 157 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEEC
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEE
Confidence 56789999999999999999999999 898876
No 371
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=89.29 E-value=0.52 Score=45.58 Aligned_cols=35 Identities=31% Similarity=0.565 Sum_probs=29.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778899988 58999999999999997 5777663
No 372
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=89.25 E-value=0.51 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=28.8
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 5567899998 68999999999999996 6888774
No 373
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.24 E-value=0.34 Score=47.57 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=56.2
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVK 92 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i~ 92 (563)
.||.|+|+|.+|+.++..|+..|. +++++|.+.-....+..+. .-|. ....... ..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~-----~~~~---------------~~~~~~~---~~ 56 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVE-----TDGS---------------IFNESLT---AN 56 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEEC-----TTSC---------------EEEEEEE---ES
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEc-----CCCc---------------eeeeeee---ec
Confidence 379999999999999999999997 7999886542111111110 0010 0011111 01
Q ss_pred CCcchHhhcccccEEEEccCCHHHHHHHHHHHHh--cCCCEEEe
Q 008516 93 DPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLA--ADVPLVES 134 (563)
Q Consensus 93 ~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~ 134 (563)
+.+..+++|+||.++-....+..+.++... .+..+++.
T Consensus 57 ----~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 57 ----DPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp ----CHHHHHTCSEEEECSCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred ----CccccCCCCEEEEEecHHhHHHHHHHHHhhCCCCCEEEEe
Confidence 124567899999999877766666554322 24456654
No 374
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=89.20 E-value=0.57 Score=45.39 Aligned_cols=33 Identities=15% Similarity=0.312 Sum_probs=26.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+..++++|.| .||||.++++.|+..|. ++.+++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~ 38 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTY 38 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEc
Confidence 3456788888 58999999999999997 566665
No 375
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.19 E-value=0.91 Score=44.01 Aligned_cols=34 Identities=15% Similarity=0.374 Sum_probs=28.0
Q ss_pred HcCCcEEEECCc---HHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAG---GIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaG---giG~ellknLal~Gvg~I~iiD~ 44 (563)
+++++++|.|++ |||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r 41 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYA 41 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecC
Confidence 567889999974 399999999999998 5777663
No 376
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=89.19 E-value=1.2 Score=45.02 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=27.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~ 77 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 77 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 6677888887 68999999999999996 577776
No 377
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=89.14 E-value=0.68 Score=45.06 Aligned_cols=61 Identities=23% Similarity=0.312 Sum_probs=39.7
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEE-eCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHII-DMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~ii-D~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
++++++|.| .||||.++++.|+..|.. +.++ +.+ ..+.+.+++.+++.. .++..+.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~-vv~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~~ 60 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN-IVINYARS-------------------KKAALETAEEIEKLG--VKVLVVK 60 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSC-------------------HHHHHHHHHHHHTTT--CCEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE-EEEEcCCC-------------------HHHHHHHHHHHHhcC--CcEEEEE
Confidence 456788887 689999999999999974 5554 211 234555555555543 3455666
Q ss_pred cCCCC
Q 008516 89 ANVKD 93 (563)
Q Consensus 89 ~~i~~ 93 (563)
.++++
T Consensus 61 ~Dv~~ 65 (258)
T 3oid_A 61 ANVGQ 65 (258)
T ss_dssp CCTTC
T ss_pred cCCCC
Confidence 66654
No 378
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=89.12 E-value=1.3 Score=43.26 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=25.4
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+.+++++|.| .||||.++++.|+..|. ++.+++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~ 58 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINY 58 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 4567788887 58999999999999997 455543
No 379
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.09 E-value=1.2 Score=47.96 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=27.5
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
++|.|||+|.+|+.++.+|+..|. +++++|.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~-~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF-KVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC-EEEEEeC
Confidence 479999999999999999999997 5788764
No 380
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=89.08 E-value=0.57 Score=44.44 Aligned_cols=34 Identities=26% Similarity=0.496 Sum_probs=27.9
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~ 38 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMARD 38 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 456788887 78999999999999997 67777643
No 381
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=89.07 E-value=1.3 Score=44.14 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=57.3
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC-CCceEEEec
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR-PQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n-p~v~I~~~~ 88 (563)
+.||.|+|+ |.+|..+++.+... |+.-+-++|.+.- .+ ...|+|.. .... .++.+ .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~---~~------~g~d~~~~---------~g~~~~~v~~---~ 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS---SL------LGSDAGEL---------AGAGKTGVTV---Q 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC---TT------CSCCTTCS---------SSSSCCSCCE---E
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCch---hh------hhhhHHHH---------cCCCcCCcee---c
Confidence 468999999 99999999998754 4322225564321 10 01122110 0000 01121 1
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccccc
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGF 139 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~G~ 139 (563)
.++ .+.+.+.|+||+.+ ++++-...-+.|.++++|++-+-+ |+
T Consensus 64 ~dl------~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTt-G~ 106 (273)
T 1dih_A 64 SSL------DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTT-GF 106 (273)
T ss_dssp SCS------TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCC-CC
T ss_pred CCH------HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECC-CC
Confidence 122 23456889999987 466667777889999999765544 54
No 382
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=89.01 E-value=0.99 Score=45.78 Aligned_cols=34 Identities=38% Similarity=0.529 Sum_probs=29.3
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGF-QDIHIIDMDT 46 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gv-g~I~iiD~D~ 46 (563)
.||.|+|+ |.+|..++..|+..|. .+|.++|.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 38999998 9999999999998885 6799999653
No 383
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=88.94 E-value=0.88 Score=44.76 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.9
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 61 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYA 61 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5567788887 78999999999999997 5777663
No 384
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.90 E-value=0.98 Score=44.90 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=29.0
Q ss_pred HHcCCcEEEECCc-H--HHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAG-G--IGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaG-g--iG~ellknLal~Gvg~I~iiD~ 44 (563)
.|++++++|.|++ + ||.++++.|+..|. ++.++|.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r 65 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQ 65 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcC
Confidence 4778899999973 4 99999999999997 5777764
No 385
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=88.89 E-value=1.1 Score=42.84 Aligned_cols=35 Identities=34% Similarity=0.609 Sum_probs=29.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 44 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDRE 44 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677899998 68999999999999996 57777643
No 386
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=88.73 E-value=1.8 Score=44.05 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=27.6
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 5799999 59999999999999995 78888754
No 387
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=88.67 E-value=0.95 Score=44.33 Aligned_cols=36 Identities=31% Similarity=0.536 Sum_probs=29.9
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 42 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKD 42 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36678899998 68999999999999996 67777643
No 388
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.62 E-value=0.4 Score=47.60 Aligned_cols=31 Identities=35% Similarity=0.572 Sum_probs=27.9
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.||.|+|+|.+|+.++..|+..|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 589999999999999999999996 7888764
No 389
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=88.60 E-value=0.71 Score=45.51 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=29.5
Q ss_pred HcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 56 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYAT 56 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCC
Confidence 56778999997 6999999999999996 67777744
No 390
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.58 E-value=0.47 Score=48.57 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=58.7
Q ss_pred HHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 7 LEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 7 q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
...|..++|.|||+|.+|..++++|...|+ ++++.|.+. .++. +...+. ++.+.
T Consensus 11 ~~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~-------------------~~~~---~~a~~~--G~~~~- 64 (338)
T 1np3_A 11 LSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSG-------------------SATV---AKAEAH--GLKVA- 64 (338)
T ss_dssp HHHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTT-------------------CHHH---HHHHHT--TCEEE-
T ss_pred cchhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEECCh-------------------HHHH---HHHHHC--CCEEc-
Confidence 456888999999999999999999999997 577766321 1111 111122 22221
Q ss_pred eccCCCCCcchHhhcccccEEEEccCCHHHHHHHH-HHHH--hcCCCEEEe
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVN-RLCL--AADVPLVES 134 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in-~~c~--~~~~pli~~ 134 (563)
. ..+.++++|+|+.|+-....+..+. ++.. ..+..++++
T Consensus 65 ---~------~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~ 106 (338)
T 1np3_A 65 ---D------VKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFA 106 (338)
T ss_dssp ---C------HHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEES
T ss_pred ---c------HHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEc
Confidence 1 2356789999999997666655555 4321 224445554
No 391
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=88.57 E-value=1.8 Score=44.15 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=61.2
Q ss_pred cCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
..++|+|.|+ |.+|..+++.|+..|. ++++++.+.- +.++ +.+.. .+ .++.+..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-----------------~~~~----~~l~~-~~--~v~~v~~ 58 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLK-----------------GLIA----EELQA-IP--NVTLFQG 58 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSC-----------------SHHH----HHHHT-ST--TEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCC-----------------hhhH----HHHhh-cC--CcEEEEC
Confidence 3578999995 9999999999999885 5777653210 1111 22222 12 3455566
Q ss_pred C-CCCCcchHhhcccccEEEEccC------CHHHHHHHHHHHHhcC-C-CEEEeccc
Q 008516 90 N-VKDPKFNVEFFKQFNVVLNGLD------NLDARRHVNRLCLAAD-V-PLVESGTT 137 (563)
Q Consensus 90 ~-i~~~~~~~~~~~~~dvVi~alD------n~~ar~~in~~c~~~~-~-pli~~gt~ 137 (563)
+ +++...-.+.+++.|+||.+.. |... ..+-+.|.+.+ + .+|..++.
T Consensus 59 D~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 59 PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHH-HHHHHHHHHHSCCSEEEEEECC
T ss_pred CccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCc
Confidence 6 6543333456788999986432 2334 45556667766 4 56666554
No 392
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.51 E-value=1 Score=42.74 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=26.3
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRS 34 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3688888 67999999999999997 48887754
No 393
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.51 E-value=0.65 Score=44.97 Aligned_cols=37 Identities=16% Similarity=0.333 Sum_probs=31.2
Q ss_pred HHHcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~ 49 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVG 49 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecc
Confidence 4577899999996 6999999999999997 68887743
No 394
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=88.47 E-value=1.2 Score=45.51 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=27.8
Q ss_pred CcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 58999996 9999999999999995 78888754
No 395
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=88.40 E-value=1.7 Score=44.16 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=49.2
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHh-CC-CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 13 AKVLMVG-AGGIGCELLKTLALS-GF-QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~-Gv-g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
.||.|+| +|.+|..++..|+.. ++ .+|.++|.+. |++--+.-+++....+++..+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecC
Confidence 4899999 899999999999886 65 5799988432 11111233444433456665422
Q ss_pred CCCCCcchHhhcccccEEEEccC
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLD 112 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alD 112 (563)
+ .+.+-++++|+||.+..
T Consensus 61 --~---~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 61 --E---DATPALEGADVVLISAG 78 (312)
T ss_dssp --S---CCHHHHTTCSEEEECCS
T ss_pred --C---CcHHHhCCCCEEEEeCC
Confidence 1 12456899999988754
No 396
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.39 E-value=0.4 Score=49.99 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=31.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+..++|+|+|+|++|..+++.+...|. +++++|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 3678999999999999999999999998 7888874
No 397
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.37 E-value=0.4 Score=48.28 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=26.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.||+|+|+|++|+.++..|+ .|. ++++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC-ceEEEEC
Confidence 478999999999999999999 884 6887753
No 398
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.32 E-value=0.42 Score=47.79 Aligned_cols=32 Identities=22% Similarity=0.489 Sum_probs=28.6
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999997 78888754
No 399
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.28 E-value=0.48 Score=45.10 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=27.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+|.|+|+|.+|..+++.|+..|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4689999999999999999999997 6777774
No 400
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=88.28 E-value=2.3 Score=45.76 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=28.2
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.++|+|.| .|.||..+++.|...|. +++.++.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 46899999 69999999999999997 67777654
No 401
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=88.25 E-value=0.84 Score=44.60 Aligned_cols=34 Identities=32% Similarity=0.565 Sum_probs=29.0
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r 38 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDR 38 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 6678899998 58999999999999997 6777764
No 402
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=88.16 E-value=1.5 Score=42.10 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=28.1
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788888 58999999999999997 68888754
No 403
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.12 E-value=0.42 Score=49.39 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=31.1
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
++..+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 567899999999999999999999999 8999874
No 404
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=88.12 E-value=1.4 Score=43.85 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=25.4
Q ss_pred HcCCcEEEECCcHHHHH-HHHHHHHh-CCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCE-LLKTLALS-GFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~e-llknLal~-Gvg~I~iiD~ 44 (563)
++..||.|||+|.+|.. .++.|... |+.-+.+.|.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 40 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP 40 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 45679999999999996 89988764 4433336653
No 405
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=88.06 E-value=0.35 Score=50.06 Aligned_cols=98 Identities=17% Similarity=0.270 Sum_probs=56.8
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhC-----CCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEE
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSG-----FQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSIT 85 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~G-----vg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~ 85 (563)
..||+|+| .|.+|.++++.|...+ .-+++.+- +..+.|+. +....|...-.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~---------------s~~~agk~--------~~~~~~~l~~~ 65 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALT---------------AATSAGST--------LGEHHPHLTPL 65 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEE---------------ESSCTTSB--------GGGTCTTCGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEE---------------CCCcCCCc--------hhhhccccccc
Confidence 35899999 8999999999999776 33444432 11123331 11122221100
Q ss_pred EeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEeccc
Q 008516 86 AHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTT 137 (563)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt~ 137 (563)
....+. ..+.+-|.+.|+|+.|+....++.++..+ +.++.+|+.++.
T Consensus 66 -~~~~~~--~~~~~~~~~~DvVf~alg~~~s~~~~~~~--~~G~~vIDlSa~ 112 (352)
T 2nqt_A 66 -AHRVVE--PTEAAVLGGHDAVFLALPHGHSAVLAQQL--SPETLIIDCGAD 112 (352)
T ss_dssp -TTCBCE--ECCHHHHTTCSEEEECCTTSCCHHHHHHS--CTTSEEEECSST
T ss_pred -ceeeec--cCCHHHhcCCCEEEECCCCcchHHHHHHH--hCCCEEEEECCC
Confidence 000010 01223366899999999877777777666 677778876543
No 406
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=88.01 E-value=1.8 Score=43.23 Aligned_cols=79 Identities=24% Similarity=0.289 Sum_probs=46.4
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCC-CceEEEec
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRP-QMSITAHH 88 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np-~v~I~~~~ 88 (563)
.+++|+|.| +|.||+.+++.|...|. +++.++.+. ++. .|.. .+.++.. .-+++.+.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~---~~~-------------~~~~----~~~~~~~~~~~~~~~~ 62 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDP---TNV-------------KKVK----HLLDLPKAETHLTLWK 62 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCT---TCH-------------HHHH----HHHTSTTHHHHEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEECCc---chh-------------HHHH----HHHhcccCCCeEEEEE
Confidence 567899998 89999999999999996 565544221 000 0111 1111110 11355566
Q ss_pred cCCCCCcchHhhcccccEEEEc
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNG 110 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~a 110 (563)
.++++...-.+.++++|+||.+
T Consensus 63 ~Dl~d~~~~~~~~~~~d~Vih~ 84 (337)
T 2c29_D 63 ADLADEGSFDEAIKGCTGVFHV 84 (337)
T ss_dssp CCTTSTTTTHHHHTTCSEEEEC
T ss_pred cCCCCHHHHHHHHcCCCEEEEe
Confidence 6775543335667889999884
No 407
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=87.95 E-value=1 Score=43.81 Aligned_cols=35 Identities=14% Similarity=0.362 Sum_probs=29.5
Q ss_pred HcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCc
Confidence 56778999997 6999999999999996 58887754
No 408
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.94 E-value=1.1 Score=46.76 Aligned_cols=32 Identities=25% Similarity=0.520 Sum_probs=28.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
..+|+|+|+|++|...+..+...|.+++..+|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 45799999999999999999999998888876
No 409
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=87.90 E-value=0.93 Score=43.99 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=29.4
Q ss_pred HcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+++++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 43 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQA 43 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCC
Confidence 56778999997 6999999999999996 57777643
No 410
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=87.87 E-value=0.77 Score=49.55 Aligned_cols=93 Identities=14% Similarity=0.195 Sum_probs=56.8
Q ss_pred cCCcEEEECCcHH--HHHHHHHHHHh-C--CCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHH----HHhhCCC
Q 008516 11 KGAKVLMVGAGGI--GCELLKTLALS-G--FQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDA----VLKFRPQ 81 (563)
Q Consensus 11 ~~~~VlvvGaGgi--G~ellknLal~-G--vg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~----l~~~np~ 81 (563)
+..||.|||+|++ |..++..|+.. + ..+++++|.|. .|++.+.+. +......
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~-------------------e~l~~~~~~~~~~l~~~~~~ 62 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE-------------------ERLDAILTIAKKYVEEVGAD 62 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCH-------------------HHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3579999999996 67778888753 3 36799998433 233322222 2233344
Q ss_pred ceEEEeccCCCCCcchHhhcccccEEEEccCC--HHHHHHHHHHHHhcCC
Q 008516 82 MSITAHHANVKDPKFNVEFFKQFNVVLNGLDN--LDARRHVNRLCLAADV 129 (563)
Q Consensus 82 v~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn--~~ar~~in~~c~~~~~ 129 (563)
.+|.+..+ . .+-++++|+||.+... .+.|....++..+++.
T Consensus 63 ~~I~~ttD------~-~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~ 105 (480)
T 1obb_A 63 LKFEKTMN------L-DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGY 105 (480)
T ss_dssp CEEEEESC------H-HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTC
T ss_pred cEEEEECC------H-HHHhCCCCEEEECCCccccccccccccccccccc
Confidence 56655321 1 2447899999998865 3344445556666654
No 411
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=87.77 E-value=0.55 Score=45.58 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=29.0
Q ss_pred HHcCCcEEEECCc---HHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAG---GIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaG---giG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++++|.|++ |||.++++.|+..|. ++.++|.
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~ 54 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYA 54 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBS
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeC
Confidence 4678889999975 999999999999997 5666653
No 412
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.74 E-value=1.1 Score=44.59 Aligned_cols=35 Identities=14% Similarity=0.413 Sum_probs=29.9
Q ss_pred HHcCCcEEEECCc---HHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAG---GIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaG---giG~ellknLal~Gvg~I~iiD~ 44 (563)
.+++++++|.|++ |||.++++.|+..|. ++.++|.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r 64 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYL 64 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeC
Confidence 3677889999986 999999999999997 5778774
No 413
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.74 E-value=0.99 Score=44.46 Aligned_cols=62 Identities=21% Similarity=0.315 Sum_probs=41.2
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
|+++.++|-| .+|||.++++.|+..|. ++.+.|. ...+.+.+++.+++.. .++..+.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~-------------------~~~~~~~~~~~l~~~g--~~~~~~~ 64 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDI-------------------RATLLAESVDTLTRKG--YDAHGVA 64 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS-------------------CHHHHHHHHHHHHHTT--CCEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC-------------------CHHHHHHHHHHHHhcC--CcEEEEE
Confidence 5667777776 78999999999999997 5777652 2234444555555543 3455566
Q ss_pred cCCCC
Q 008516 89 ANVKD 93 (563)
Q Consensus 89 ~~i~~ 93 (563)
.++++
T Consensus 65 ~Dv~~ 69 (255)
T 4g81_D 65 FDVTD 69 (255)
T ss_dssp CCTTC
T ss_pred eeCCC
Confidence 66543
No 414
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.72 E-value=0.46 Score=49.22 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=31.1
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
+..++|+|+|+|++|..+++.+...|. +++++|.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 678899999999999999999999998 7888873
No 415
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=87.70 E-value=0.86 Score=44.50 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=28.6
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 60 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRT 60 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 58999999999999997 58888754
No 416
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.65 E-value=0.5 Score=47.99 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=28.8
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..||.|+|+|.+|+.++..|+..|. +++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4689999999999999999999996 58887743
No 417
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=87.61 E-value=1.1 Score=43.03 Aligned_cols=63 Identities=25% Similarity=0.248 Sum_probs=41.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
+++++++|.| .||||.++++.|+..|. ++.+++.. ...+.+.+.+.+.+.. .++..+.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~------------------~~~~~~~~~~~~~~~~--~~~~~~~ 63 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGN------------------RKEEAEETVYEIQSNG--GSAFSIG 63 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS------------------CSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC------------------chHHHHHHHHHHHhcC--CceEEEe
Confidence 5677888888 58999999999999997 45554321 1234445555555543 3555666
Q ss_pred cCCCC
Q 008516 89 ANVKD 93 (563)
Q Consensus 89 ~~i~~ 93 (563)
.++++
T Consensus 64 ~D~~~ 68 (255)
T 3icc_A 64 ANLES 68 (255)
T ss_dssp CCTTS
T ss_pred cCcCC
Confidence 66643
No 418
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.38 E-value=0.46 Score=51.31 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=31.3
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
|.+++|+|+|+|+||..+++.|+..|. ++.++|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 578899999999999999999999998 78887753
No 419
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.37 E-value=0.55 Score=45.29 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=26.5
Q ss_pred HHHHHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 5 RQLEAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 5 ~~q~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
+....+++++|+|.| .||||.++++.|+..|. ++.++|
T Consensus 6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~ 44 (256)
T 3ezl_A 6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGC 44 (256)
T ss_dssp -------CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEE
T ss_pred CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEe
Confidence 445567888899997 68999999999999997 466655
No 420
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=87.35 E-value=1.7 Score=41.72 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=51.1
Q ss_pred CCcEEEECCcHHHHHHHHH--HHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 12 GAKVLMVGAGGIGCELLKT--LALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellkn--Lal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
..+|+|||+|.+|..+++. +...|+.-+-++|.|.= .+|+. + .++.|.. ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~--------------k~g~~-----------i-~gv~V~~-~~ 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES--------------KIGTE-----------V-GGVPVYN-LD 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT--------------TTTCE-----------E-TTEEEEE-GG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH--------------HHHhH-----------h-cCCeeec-hh
Confidence 4689999999999999994 34557777778885542 11210 0 1233332 11
Q ss_pred CCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEE
Q 008516 90 NVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLV 132 (563)
Q Consensus 90 ~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli 132 (563)
+ -.++++..|+|+-|+.+... ..+-+.|...++.-|
T Consensus 138 d------l~eli~~~D~ViIAvPs~~~-~ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 138 D------LEQHVKDESVAILTVPAVAA-QSITDRLVALGIKGI 173 (215)
T ss_dssp G------HHHHCSSCCEEEECSCHHHH-HHHHHHHHHTTCCEE
T ss_pred h------HHHHHHhCCEEEEecCchhH-HHHHHHHHHcCCCEE
Confidence 1 23455555999999876544 456677778877644
No 421
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=87.33 E-value=1.2 Score=43.46 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=38.4
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEecc
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHA 89 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~ 89 (563)
.+++|+|.| .||||.++++.|+..|.. +.+++.. ...+.+.+.+.+.+.. .++..+..
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~~------------------~~~~~~~~~~~~~~~~--~~~~~~~~ 83 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYAA------------------NREAADAVVAAITESG--GEAVAIPG 83 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESS------------------CHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCC------------------ChhHHHHHHHHHHhcC--CcEEEEEc
Confidence 345567777 689999999999999974 5444211 1234445555555543 35556666
Q ss_pred CCCC
Q 008516 90 NVKD 93 (563)
Q Consensus 90 ~i~~ 93 (563)
++++
T Consensus 84 Dl~~ 87 (272)
T 4e3z_A 84 DVGN 87 (272)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6643
No 422
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=87.32 E-value=0.62 Score=44.55 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=30.5
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
++.+|+|||+|..|++++..|++.|. +++++|..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecC
Confidence 45689999999999999999999998 68898875
No 423
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=87.31 E-value=1.2 Score=43.29 Aligned_cols=34 Identities=18% Similarity=0.410 Sum_probs=26.2
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD 43 (563)
.+.++.++|.| .||||.++++.|+..|. ++.++|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~ 56 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSH 56 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 35566677877 68999999999999997 466665
No 424
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=87.31 E-value=1.5 Score=42.30 Aligned_cols=35 Identities=31% Similarity=0.527 Sum_probs=29.5
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLR 39 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5678899998 58999999999999996 68787643
No 425
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.31 E-value=0.61 Score=50.37 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=30.0
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.++|.|||+|.+|..++++|+..|. ++++.|.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4689999999999999999999997 688888654
No 426
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=87.26 E-value=1.1 Score=46.60 Aligned_cols=92 Identities=22% Similarity=0.346 Sum_probs=57.2
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCe--EEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQD--IHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~--I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
..||.||| .|.+|.|+++.|...++-. +.++.. .+..|+.-+ +. +..+...
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as---------------~~saG~~~~---------~~-~~~~~~~- 55 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS---------------ARSAGKSLK---------FK-DQDITIE- 55 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC---------------TTTTTCEEE---------ET-TEEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc---------------cccCCCcce---------ec-CCCceEe-
Confidence 45899999 5778999999999886644 444332 223333221 00 1112111
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecc
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGT 136 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt 136 (563)
.+. .+.+++.|+|+.|+....++.+.... ...|..+|+.+.
T Consensus 56 -~~~-----~~~~~~~Dvvf~a~~~~~s~~~a~~~-~~~G~~vIDlSa 96 (366)
T 3pwk_A 56 -ETT-----ETAFEGVDIALFSAGSSTSAKYAPYA-VKAGVVVVDNTS 96 (366)
T ss_dssp -ECC-----TTTTTTCSEEEECSCHHHHHHHHHHH-HHTTCEEEECSS
T ss_pred -eCC-----HHHhcCCCEEEECCChHhHHHHHHHH-HHCCCEEEEcCC
Confidence 111 12357899999999887777776554 567888888765
No 427
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.26 E-value=1.3 Score=44.20 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=31.0
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+||+++.++|-| .+|||-++++.|+..|. ++.++|.+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 367888888888 67999999999999998 68888743
No 428
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=87.25 E-value=3.5 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=27.6
Q ss_pred cCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 11 KGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 11 ~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..++|||.| +|.||..+++.|+..|. +++++|..
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~ 44 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNL 44 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEec
Confidence 457899998 68899999999999996 78888753
No 429
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.16 E-value=2 Score=43.77 Aligned_cols=33 Identities=33% Similarity=0.464 Sum_probs=29.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+|+|.|+|++|...+......|...+..+|.
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 578999999999999999999999988888873
No 430
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.13 E-value=0.52 Score=48.15 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=29.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+|+|+|+|++|...+..+..+|.+++..+|.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 199 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 568999999999999999999999988888864
No 431
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=87.11 E-value=1.8 Score=44.26 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=26.1
Q ss_pred HHHHcCCcEEEECCcHHHHHHHHHHH-H-hCCCeEEEEeC
Q 008516 7 LEAIKGAKVLMVGAGGIGCELLKTLA-L-SGFQDIHIIDM 44 (563)
Q Consensus 7 q~kL~~~~VlvvGaGgiG~ellknLa-l-~Gvg~I~iiD~ 44 (563)
..+++..||.|||+|.+|...++.|. . .|+.-+.+.|.
T Consensus 18 ~~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~ 57 (357)
T 3ec7_A 18 YFQGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI 57 (357)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred ccCCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC
Confidence 34556679999999999999999998 4 35433445553
No 432
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.08 E-value=0.59 Score=45.39 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=27.1
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
.||.|||+|.+|+.+++.|+..|..+++++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEEC
Confidence 3799999999999999999999954677776
No 433
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.07 E-value=0.57 Score=45.98 Aligned_cols=89 Identities=15% Similarity=0.107 Sum_probs=54.4
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVK 92 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i~ 92 (563)
.+|.|||+|.+|..+++.|...|. +++++|.+. .+++.+ .+.. +.... ..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~-------------------~~~~~~----~~~g--~~~~~-~~~-- 51 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQ-------------------STCEKA----VERQ--LVDEA-GQD-- 51 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH-------------------HHHHHH----HHTT--SCSEE-ESC--
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHH----HhCC--CCccc-cCC--
Confidence 379999999999999999999997 687776331 122222 1111 11001 111
Q ss_pred CCcchHhhcccccEEEEccCCHHHHHHHHHHHHh--cCCCEEEec
Q 008516 93 DPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLA--ADVPLVESG 135 (563)
Q Consensus 93 ~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~g 135 (563)
..+. .++|+|+.|+-....+..+.++... .+..+++.+
T Consensus 52 ----~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~~~~vv~~~ 91 (279)
T 2f1k_A 52 ----LSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSPTAIVTDVA 91 (279)
T ss_dssp ----GGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred ----HHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 1244 7899999999866556666554322 345566653
No 434
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=86.97 E-value=2.1 Score=46.57 Aligned_cols=74 Identities=19% Similarity=0.351 Sum_probs=50.7
Q ss_pred HHHcCCcEEEECCcHHHHHHHHHHHH----hCC------CeEEEEeCCccCcc---cCcc--ccCCCCC-CCCchHHHHH
Q 008516 8 EAIKGAKVLMVGAGGIGCELLKTLAL----SGF------QDIHIIDMDTIEVS---NLNR--QFLFRQS-HVGQSKAKVA 71 (563)
Q Consensus 8 ~kL~~~~VlvvGaGgiG~ellknLal----~Gv------g~I~iiD~D~Ve~s---NLnR--qfLf~~~-diGk~Ka~va 71 (563)
.+|.+.||++.|+|+-|+-+++.|.. .|+ ++|.++|..-+=.. +|+. +.+-+.. +.| .+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L 352 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMK-----NL 352 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCC-----CH
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCC-----CH
Confidence 36889999999999999999999998 896 69999998655322 3432 1222221 222 26
Q ss_pred HHHHHhhCCCceEEE
Q 008516 72 RDAVLKFRPQMSITA 86 (563)
Q Consensus 72 ~~~l~~~np~v~I~~ 86 (563)
.+.++...|++-|-.
T Consensus 353 ~eav~~vkp~vlIG~ 367 (555)
T 1gq2_A 353 EDIVKDIKPTVLIGV 367 (555)
T ss_dssp HHHHHHHCCSEEEEC
T ss_pred HHHHhhcCCCEEEEe
Confidence 677777777766544
No 435
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.91 E-value=0.81 Score=46.32 Aligned_cols=34 Identities=26% Similarity=0.514 Sum_probs=30.3
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...+|+|.|+|++|...+..+..+|...+..+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4578999999999999999999999999888873
No 436
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=86.87 E-value=0.55 Score=46.77 Aligned_cols=33 Identities=21% Similarity=0.486 Sum_probs=29.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
...|+|||+|..|..++..|++.|+ +++|+|..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~ 34 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC-cEEEEECC
Confidence 4689999999999999999999998 69999865
No 437
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=86.82 E-value=0.86 Score=44.09 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=27.1
Q ss_pred HHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|+++.++|.| .||||.++++.|+..|. ++.++|.
T Consensus 6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 41 (257)
T 3tl3_A 6 EIRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDI 41 (257)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred eecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 47788899998 58999999999999997 5777764
No 438
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=86.80 E-value=0.95 Score=45.62 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=27.4
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCC----CeEEEEeCC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGF----QDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gv----g~I~iiD~D 45 (563)
++|+|.| .|.||+.+++.|...|- .+++.+|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence 5799999 59999999999999882 468887754
No 439
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=86.79 E-value=0.64 Score=45.74 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=30.6
Q ss_pred HHHcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+++++++|.|+ +|||.++++.|+..|. ++.++|.+
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~ 61 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVG 61 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCc
Confidence 4567888999995 4599999999999997 68888754
No 440
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=86.73 E-value=1.8 Score=47.00 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=51.5
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+++|+|.| .||||.++++.|+..|..++.+++...-+ .++.+.+.+.+... +.++..+..+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~----------------~~~~~~l~~~l~~~--g~~v~~~~~D 320 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPE----------------APGAAELAEELRGH--GCEVVHAACD 320 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGG----------------STTHHHHHHHHHTT--TCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcc----------------cHHHHHHHHHHHhc--CCEEEEEEeC
Confidence 46788886 89999999999999999889888643211 11233344444443 4567777777
Q ss_pred CCCCcchHhhccc--ccEEEEc
Q 008516 91 VKDPKFNVEFFKQ--FNVVLNG 110 (563)
Q Consensus 91 i~~~~~~~~~~~~--~dvVi~a 110 (563)
+++...-..++++ .|+||++
T Consensus 321 vtd~~~v~~~~~~~~ld~VVh~ 342 (511)
T 2z5l_A 321 VAERDALAALVTAYPPNAVFHT 342 (511)
T ss_dssp SSCHHHHHHHHHHSCCSEEEEC
T ss_pred CCCHHHHHHHHhcCCCcEEEEC
Confidence 7543322334433 6777774
No 441
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=86.68 E-value=1.5 Score=42.33 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=25.8
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCC-eEEEEeC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQ-DIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg-~I~iiD~ 44 (563)
+++++|.| .||||.++++.|+..|.+ .+.+++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r 36 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR 36 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC
Confidence 46788888 689999999999999865 4555543
No 442
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=86.65 E-value=1.1 Score=43.87 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=29.6
Q ss_pred HcCCcEEEECC---cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVGA---GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvGa---GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999997 6999999999999996 68887743
No 443
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.58 E-value=0.57 Score=47.45 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=51.8
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCC---CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEE
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGF---QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITA 86 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gv---g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~ 86 (563)
+...+|.|||+|.+|+.++++|+..|+ ..++++|.+.- ..+++.++ +. ++.+..
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~-----------------~~~~~~l~----~~--G~~~~~ 76 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD-----------------LATVSALR----KM--GVKLTP 76 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT-----------------SHHHHHHH----HH--TCEEES
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc-----------------HHHHHHHH----Hc--CCEEeC
Confidence 345689999999999999999999995 56887763210 02333332 21 233211
Q ss_pred eccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHH
Q 008516 87 HHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRL 123 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~ 123 (563)
...+..+++|+||.|+-....+..+.++
T Consensus 77 ---------~~~e~~~~aDvVilav~~~~~~~vl~~l 104 (322)
T 2izz_A 77 ---------HNKETVQHSDVLFLAVKPHIIPFILDEI 104 (322)
T ss_dssp ---------CHHHHHHHCSEEEECSCGGGHHHHHHHH
T ss_pred ---------ChHHHhccCCEEEEEeCHHHHHHHHHHH
Confidence 1245567899999999755555555544
No 444
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=86.53 E-value=3.7 Score=38.77 Aligned_cols=86 Identities=13% Similarity=0.234 Sum_probs=57.2
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
..++++|+|+|+-|.+++..|...|..-+-++|.|.-. . . +. ++.|-.....
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~-~----~-~~----------------------g~~Vlg~~~~ 62 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTR-R----A-VL----------------------GVPVVGDDLA 62 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC--------C-BT----------------------TBCEEESGGG
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCccc-C----c-CC----------------------CeeEECCHHH
Confidence 44689999999999999999998898888899876321 1 1 11 1222221111
Q ss_pred CCCCcchHhhcc-cccEEEEccCCHHHHHHHHHHHHhcCCC
Q 008516 91 VKDPKFNVEFFK-QFNVVLNGLDNLDARRHVNRLCLAADVP 130 (563)
Q Consensus 91 i~~~~~~~~~~~-~~dvVi~alDn~~ar~~in~~c~~~~~p 130 (563)
+ .++.+ ..+-++.|..+.+.|+.+.+.+...+..
T Consensus 63 ~------~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~ 97 (220)
T 4ea9_A 63 L------PMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFS 97 (220)
T ss_dssp H------HHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCE
T ss_pred H------HHhhcccccEEEEecCCHHHHHHHHHHHHhcCCC
Confidence 1 12222 2355778888899999999999887753
No 445
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=86.52 E-value=0.64 Score=48.04 Aligned_cols=39 Identities=26% Similarity=0.262 Sum_probs=31.4
Q ss_pred HHHHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 7 LEAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 7 q~kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.+.-+..+|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 445567899999999999999999999998 699999764
No 446
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.51 E-value=0.86 Score=44.63 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=36.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCccc-cceeeecccccccccccccCCCCCCCCcccCCCc
Q 008516 375 HAVATTNAIIAGLIVIEAIKVLLKDTDK-YRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSET 436 (563)
Q Consensus 375 PAIATTnAiVAGl~vlE~~K~l~~~~~~-~r~~f~~~~~~~~~~~~p~~~~~pn~~C~vC~~~ 436 (563)
+.++.+.++++++++.|++|+|.|..+. .+..+++.... . .. ...-+++|.|.+|+..
T Consensus 188 g~~~p~~~~~g~~~A~e~lk~l~g~~~~~~~~~~~d~~~~--~-~~-~~~~~~~p~C~~C~~~ 246 (251)
T 1zud_1 188 GVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSS--Q-WR-SLALRRASGCPVCGGS 246 (251)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTCCCCCSEEEEEETTTT--E-EE-EEECCCCTTCTTTCC-
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCCcCCcEEEEECCCC--E-EE-EEecCCCcCCCccCCC
Confidence 4567788999999999999999986432 22222222111 1 11 1123478999999853
No 447
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=86.36 E-value=2.6 Score=42.64 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=51.5
Q ss_pred CcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
.||.|||+|.+|...++.|... |+.-+.+.|.+ ..+++.+++ ++. +.+ +. +
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~-------------------~~~~~~~a~---~~g--~~~--~~-~- 56 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPF-------------------IEGAQRLAE---ANG--AEA--VA-S- 56 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS-------------------HHHHHHHHH---TTT--CEE--ES-S-
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC-------------------HHHHHHHHH---HcC--Cce--eC-C-
Confidence 5899999999999999999886 43323355532 233333322 222 222 11 1
Q ss_pred CCCcchHhhcc--cccEEEEccCCHHHHHHHHHHHHhcCCCEE
Q 008516 92 KDPKFNVEFFK--QFNVVLNGLDNLDARRHVNRLCLAADVPLV 132 (563)
Q Consensus 92 ~~~~~~~~~~~--~~dvVi~alDn~~ar~~in~~c~~~~~pli 132 (563)
-.+.+. +.|+|+.|+.+..- ..+-..|..++++++
T Consensus 57 -----~~~~l~~~~~D~V~i~tp~~~h-~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 57 -----PDEVFARDDIDGIVIGSPTSTH-VDLITRAVERGIPAL 93 (344)
T ss_dssp -----HHHHTTCSCCCEEEECSCGGGH-HHHHHHHHHTTCCEE
T ss_pred -----HHHHhcCCCCCEEEEeCCchhh-HHHHHHHHHcCCcEE
Confidence 134555 78999999876443 334445677777655
No 448
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=86.31 E-value=0.72 Score=46.79 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=31.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
...|+|||+|.+|+.+|..|++.|. +++|+|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4689999999999999999999997 79999977654
No 449
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.23 E-value=0.71 Score=45.40 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=56.1
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQ-DIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANV 91 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg-~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~i 91 (563)
++|.|||+|.+|..+++.|+..|.. +++++|.+. .+.+.+ .+.. +..... .+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~~----~~~g--~~~~~~-~~- 54 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISKA----VDLG--IIDEGT-TS- 54 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHHH----HHTT--SCSEEE-SC-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHHHH----HHCC--Cccccc-CC-
Confidence 4799999999999999999999963 677776331 122222 1211 110010 11
Q ss_pred CCCcchHhhcc-cccEEEEccCCHHHHHHHHHHHHh--cCCCEEEec
Q 008516 92 KDPKFNVEFFK-QFNVVLNGLDNLDARRHVNRLCLA--ADVPLVESG 135 (563)
Q Consensus 92 ~~~~~~~~~~~-~~dvVi~alDn~~ar~~in~~c~~--~~~pli~~g 135 (563)
..+.++ ++|+|+.|+-....+..+.++... .+..+++.+
T Consensus 55 -----~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~~~ 96 (281)
T 2g5c_A 55 -----IAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQG 96 (281)
T ss_dssp -----GGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -----HHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 124567 899999999876666666655332 345566644
No 450
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.15 E-value=1.4 Score=41.59 Aligned_cols=34 Identities=24% Similarity=0.504 Sum_probs=28.5
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
+++|+|.| .|+||.++++.|+..|. ++.++|.+.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~ 36 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRR 36 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCc
Confidence 56899998 68999999999999996 688877553
No 451
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=86.14 E-value=0.97 Score=44.54 Aligned_cols=34 Identities=26% Similarity=0.592 Sum_probs=29.1
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|++++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 37 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDK 37 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 5678889998 68999999999999997 6778764
No 452
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=86.13 E-value=1.5 Score=44.81 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=25.9
Q ss_pred CCcEEEECCcHHHHHHHHHHHHh--CCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALS--GFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~--Gvg~I~iiD~ 44 (563)
..||.|||+|.+|...++.|... |+.-+.+.|.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~ 47 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI 47 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 45899999999999999999987 4443446553
No 453
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=86.12 E-value=1.9 Score=43.89 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=25.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~ 44 (563)
..||.|||+|.+|...++.|... |+.-+.+.|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 45899999999999999999876 5443445564
No 454
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=86.07 E-value=0.74 Score=48.02 Aligned_cols=37 Identities=27% Similarity=0.507 Sum_probs=33.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
...|+|||+|..|+..|..|++.|..+++|+|.+.+-
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 4579999999999999999999998789999987763
No 455
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=86.05 E-value=0.59 Score=48.45 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=54.7
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEec
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHH 88 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~ 88 (563)
++..||.|+| .|.+|.++++.|...+--++..+. +..+.|+.-..+- ..+...+ +
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~---------------~~~~~g~~~~~~~----~~~~~~v-~---- 69 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMT---------------ADRKAGQSMESVF----PHLRAQK-L---- 69 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEB---------------CSTTTTSCHHHHC----GGGTTSC-C----
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEe---------------CchhcCCCHHHhC----chhcCcc-c----
Confidence 3457899999 799999999999876532343332 1123333221110 1111110 0
Q ss_pred cCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEec
Q 008516 89 ANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESG 135 (563)
Q Consensus 89 ~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~g 135 (563)
.++.-.. .+.|++.|+|+.|+.....+...... +.|+.+|+.+
T Consensus 70 ~dl~~~~--~~~~~~vDvVf~atp~~~s~~~a~~~--~aG~~VId~s 112 (359)
T 1xyg_A 70 PTLVSVK--DADFSTVDAVFCCLPHGTTQEIIKEL--PTALKIVDLS 112 (359)
T ss_dssp CCCBCGG--GCCGGGCSEEEECCCTTTHHHHHHTS--CTTCEEEECS
T ss_pred ccceecc--hhHhcCCCEEEEcCCchhHHHHHHHH--hCCCEEEECC
Confidence 1110011 23467899999999877777665544 6666666654
No 456
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=86.00 E-value=2.5 Score=37.45 Aligned_cols=40 Identities=10% Similarity=0.170 Sum_probs=30.9
Q ss_pred HHHHHH-cCCcEEEECC----cHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 5 RQLEAI-KGAKVLMVGA----GGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 5 ~~q~kL-~~~~VlvvGa----GgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+...-| .-.+|.|||+ |.+|..++++|...|+ ++.-++..
T Consensus 5 ~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~-~v~~vnp~ 49 (140)
T 1iuk_A 5 ELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGY-RVLPVNPR 49 (140)
T ss_dssp HHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTC-EEEEECGG
T ss_pred HHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCC-EEEEeCCC
Confidence 344445 5789999999 7899999999999998 45555443
No 457
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=85.97 E-value=2.1 Score=46.07 Aligned_cols=81 Identities=19% Similarity=0.279 Sum_probs=50.1
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+.+++|.| .||||.++++.|+..|..++.+++...-+ ..+++.+.+.+... +.++..+..+
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~----------------~~~~~~l~~~l~~~--g~~v~~~~~D 287 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPD----------------ADGAGELVAELEAL--GARTTVAACD 287 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGG----------------STTHHHHHHHHHHT--TCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCC----------------cHHHHHHHHHHHhc--CCEEEEEEeC
Confidence 46788887 89999999999999999889988754311 11233334444443 3466666666
Q ss_pred CCCCcchHhhcc------cccEEEEc
Q 008516 91 VKDPKFNVEFFK------QFNVVLNG 110 (563)
Q Consensus 91 i~~~~~~~~~~~------~~dvVi~a 110 (563)
+++...-...++ ..|+||++
T Consensus 288 v~d~~~v~~~~~~i~~~g~ld~VIh~ 313 (486)
T 2fr1_A 288 VTDRESVRELLGGIGDDVPLSAVFHA 313 (486)
T ss_dssp TTCHHHHHHHHHTSCTTSCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEEC
Confidence 654322223333 34777764
No 458
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=85.88 E-value=0.57 Score=50.04 Aligned_cols=39 Identities=21% Similarity=0.412 Sum_probs=36.1
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCC--CeEEEEeCCcc
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGF--QDIHIIDMDTI 47 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gv--g~I~iiD~D~V 47 (563)
+|.+.||++.|+|+-|.-+++.|+..|+ ++|.++|..-+
T Consensus 216 ~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 216 DIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred ChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 5889999999999999999999999999 89999997754
No 459
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=85.86 E-value=0.7 Score=45.27 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=28.3
Q ss_pred HcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 10 IKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 10 L~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
+..++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 38 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARR 38 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3567788887 58999999999999996 67777754
No 460
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=85.80 E-value=2 Score=44.02 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=57.0
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
..||.|+| .|.+|.++++.|...++..+.++= + ....+.|+.-+ ++ +..+....
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~---i----------~s~~~~G~~~~---------~~-~~~i~~~~-- 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFL---L----------ASERSEGKTYR---------FN-GKTVRVQN-- 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEE---E----------ECTTTTTCEEE---------ET-TEEEEEEE--
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEE---E----------ECCCCCCCcee---------ec-CceeEEec--
Confidence 35899999 899999999999988655444431 0 00112333110 11 11222211
Q ss_pred CCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecc
Q 008516 91 VKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGT 136 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt 136 (563)
. +.+.|++.|+|+.|+....++.+... ..+.|..+|+.+.
T Consensus 58 ~-----~~~~~~~vDvVf~a~g~~~s~~~a~~-~~~~G~~vId~s~ 97 (336)
T 2r00_A 58 V-----EEFDWSQVHIALFSAGGELSAKWAPI-AAEAGVVVIDNTS 97 (336)
T ss_dssp G-----GGCCGGGCSEEEECSCHHHHHHHHHH-HHHTTCEEEECSS
T ss_pred C-----ChHHhcCCCEEEECCCchHHHHHHHH-HHHcCCEEEEcCC
Confidence 1 12245789999999998777776654 4567777887654
No 461
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.71 E-value=2.9 Score=40.37 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=30.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
..+|+|||+|..|..++..|++.|. +++|+|...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK-NILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 3589999999999999999999997 799999653
No 462
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=85.66 E-value=2.1 Score=43.12 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=25.5
Q ss_pred CCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~ 44 (563)
..||.|||+|.+|...++.|... |+.-+.+.|.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 36 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA 36 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence 35899999999999999999986 4433345654
No 463
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=85.62 E-value=2 Score=45.51 Aligned_cols=99 Identities=10% Similarity=0.061 Sum_probs=58.0
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHh-CCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhC-CCceEEE
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALS-GFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFR-PQMSITA 86 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~-Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~n-p~v~I~~ 86 (563)
.++..||.|||+|.+|...+..|... |+.-+.+.| ....|++.+++.+.+.. |.+++
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d-------------------~~~~~~~~~a~~~~~~g~~~~~~-- 75 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFAD-------------------PDPYMVGRAQEILKKNGKKPAKV-- 75 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEC-------------------SCHHHHHHHHHHHHHTTCCCCEE--
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEe-------------------CCHHHHHHHHHHHHhcCCCCCce--
Confidence 44567999999999999999988864 332233444 23456666666665443 33332
Q ss_pred eccCCCCCcchHhhcc--cccEEEEccCCHHHHHHHHHHHHhcCCCEE
Q 008516 87 HHANVKDPKFNVEFFK--QFNVVLNGLDNLDARRHVNRLCLAADVPLV 132 (563)
Q Consensus 87 ~~~~i~~~~~~~~~~~--~~dvVi~alDn~~ar~~in~~c~~~~~pli 132 (563)
+... +.. -.+++. +.|+|+.|+.+. ....+...|.+++++++
T Consensus 76 ~~~~--~~~-~~~ll~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~ 119 (444)
T 2ixa_A 76 FGNG--NDD-YKNMLKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVG 119 (444)
T ss_dssp ECSS--TTT-HHHHTTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEE
T ss_pred eccC--CCC-HHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEE
Confidence 2210 011 134554 589999988754 34444556667776544
No 464
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=85.57 E-value=1.8 Score=47.46 Aligned_cols=73 Identities=19% Similarity=0.312 Sum_probs=51.3
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHH----hCC------CeEEEEeCCccCcc---cCcc--ccCCCCC-CCCchHHHHHH
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLAL----SGF------QDIHIIDMDTIEVS---NLNR--QFLFRQS-HVGQSKAKVAR 72 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal----~Gv------g~I~iiD~D~Ve~s---NLnR--qfLf~~~-diGk~Ka~va~ 72 (563)
+|.+.||++.|+|+-|+.+++.|+. .|+ ++|.++|..-+=.. +|+. +.|-+.. +.| .+.
T Consensus 317 ~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L~ 391 (605)
T 1o0s_A 317 LVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPETT-----SIL 391 (605)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCCCC-----CHH
T ss_pred ChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCCCC-----CHH
Confidence 6889999999999999999999998 786 58999998655332 3432 1222221 222 377
Q ss_pred HHHHhhCCCceEEE
Q 008516 73 DAVLKFRPQMSITA 86 (563)
Q Consensus 73 ~~l~~~np~v~I~~ 86 (563)
+.++...|++-|-.
T Consensus 392 eav~~vkpdVlIG~ 405 (605)
T 1o0s_A 392 EVIRAARPGALIGA 405 (605)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHhhcCCCEEEEe
Confidence 77777777776644
No 465
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.54 E-value=0.93 Score=46.72 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=29.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
..+|+|+|+|++|...+..+...|.+++..+|
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 214 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILST 214 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 57899999999999999999999998888886
No 466
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.54 E-value=0.75 Score=46.68 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=28.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
...||.|+|+|.+|+.++..|+..|. +++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 46799999999999999999999995 6777763
No 467
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=85.46 E-value=0.8 Score=47.47 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=31.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
.+.+|+|||+|..|..++..|++.|+.+++|+|...
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 356899999999999999999999996699998654
No 468
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=85.40 E-value=0.69 Score=48.09 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.7
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
|.+++|.|+|+|.+|..+++.|...|. ++.+.|.
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~ 204 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDV 204 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcC
Confidence 678999999999999999999999998 5778874
No 469
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=85.38 E-value=2.3 Score=45.36 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=59.8
Q ss_pred CCcEEEECCcHH-HHHHHHHHHH--hCC--CeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHH---HH-HhhCCCc
Q 008516 12 GAKVLMVGAGGI-GCELLKTLAL--SGF--QDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARD---AV-LKFRPQM 82 (563)
Q Consensus 12 ~~~VlvvGaGgi-G~ellknLal--~Gv--g~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~---~l-~~~np~v 82 (563)
..||.|||+|++ |..++..|+. .++ .+|.++|.|. |+.|++.+.+ .+ .......
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~-----------------~~e~~~~~~~~~~~~~~~~~~~~ 69 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----------------GKEKLEIVGALAKRMVEKAGVPI 69 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----------------GHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC-----------------ChHHHHHHHHHHHHHHhhcCCCc
Confidence 468999999999 8888888887 565 5699988322 2245444222 22 2445556
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCC--HHHHHHHHHHHHhcCC
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDN--LDARRHVNRLCLAADV 129 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn--~~ar~~in~~c~~~~~ 129 (563)
+|.+..+ -.+-++++|+||.+... .+.|.....+..+++.
T Consensus 70 ~i~~t~D-------~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~ 111 (450)
T 1s6y_A 70 EIHLTLD-------RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGV 111 (450)
T ss_dssp EEEEESC-------HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTC
T ss_pred EEEEeCC-------HHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCc
Confidence 7766321 12457899999998764 3345554555556665
No 470
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=85.25 E-value=0.8 Score=46.58 Aligned_cols=36 Identities=22% Similarity=0.493 Sum_probs=32.0
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
..+|+|||+|..|+.+|..|++.|. +++|+|.+.+.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~-~V~lle~~~~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGE-EVTVIEKRFIG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCC
Confidence 4689999999999999999999998 59999987654
No 471
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.20 E-value=0.63 Score=47.68 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=30.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|.+++|.|||+|.+|..+++.|...|. ++.++|.
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~ 177 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSR 177 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5788999999999999999999998886 6777763
No 472
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.18 E-value=0.74 Score=46.35 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=31.5
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.|.+++|.|||.|.+|..+++.|...|. ++..+|..
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 154 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRS 154 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred eeecchheeeccCchhHHHHHHHHhhCc-EEEEEecc
Confidence 3778999999999999999999999998 67777743
No 473
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=85.17 E-value=1.5 Score=45.54 Aligned_cols=96 Identities=17% Similarity=0.320 Sum_probs=60.2
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHH--------HHHHhhCCCc
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVAR--------DAVLKFRPQM 82 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~--------~~l~~~np~v 82 (563)
..||.|||+ |-+|.|+++.|...-.-+|..+ ...+..|+.-+++.. +... +.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l---------------~S~~saGk~~~~~~p~~~~~~~~~~~~----~~ 67 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYL---------------AGKGSVGKPYGEVVRWQTVGQVPKEIA----DM 67 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEE---------------EESTTTTSBHHHHCCCCSSSCCCHHHH----TC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEE---------------ECchhcCCChhHhcccccccccccccc----cc
Confidence 468999995 8899999998876544344443 344556765443310 0000 11
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecc
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGT 136 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt 136 (563)
.++. .+.+.+.+.|+|+.|+....++.+.... ...+..+|+.+.
T Consensus 68 ~v~~---------~~~~~~~~vDvvf~a~p~~~s~~~a~~~-~~~G~~vIDlSa 111 (359)
T 4dpk_A 68 EIKP---------TDPKLMDDVDIIFSPLPQGAAGPVEEQF-AKEGFPVISNSP 111 (359)
T ss_dssp BCEE---------CCGGGCTTCCEEEECCCTTTHHHHHHHH-HHTTCEEEECSS
T ss_pred eEEe---------CCHHHhcCCCEEEECCChHHHHHHHHHH-HHCCCEEEEcCC
Confidence 2211 1223357999999999988888766554 567888888764
No 474
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=85.17 E-value=1.5 Score=45.54 Aligned_cols=96 Identities=17% Similarity=0.320 Sum_probs=60.2
Q ss_pred CCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHH--------HHHHhhCCCc
Q 008516 12 GAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVAR--------DAVLKFRPQM 82 (563)
Q Consensus 12 ~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~--------~~l~~~np~v 82 (563)
..||.|||+ |-+|.|+++.|...-.-+|..+ ...+..|+.-+++.. +... +.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l---------------~S~~saGk~~~~~~p~~~~~~~~~~~~----~~ 67 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYL---------------AGKGSVGKPYGEVVRWQTVGQVPKEIA----DM 67 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEE---------------EESTTTTSBHHHHCCCCSSSCCCHHHH----TC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEE---------------ECchhcCCChhHhcccccccccccccc----cc
Confidence 468999995 8899999998876544344443 344556765443310 0000 11
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecc
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGT 136 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt 136 (563)
.++. .+.+.+.+.|+|+.|+....++.+.... ...+..+|+.+.
T Consensus 68 ~v~~---------~~~~~~~~vDvvf~a~p~~~s~~~a~~~-~~~G~~vIDlSa 111 (359)
T 4dpl_A 68 EIKP---------TDPKLMDDVDIIFSPLPQGAAGPVEEQF-AKEGFPVISNSP 111 (359)
T ss_dssp BCEE---------CCGGGCTTCCEEEECCCTTTHHHHHHHH-HHTTCEEEECSS
T ss_pred eEEe---------CCHHHhcCCCEEEECCChHHHHHHHHHH-HHCCCEEEEcCC
Confidence 2211 1223357999999999988888766554 567888888764
No 475
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.15 E-value=0.69 Score=45.83 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=28.0
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
..+|.|||+|.+|..+++.|+..|. +++++|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 4689999999999999999999997 6777763
No 476
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=85.10 E-value=0.98 Score=47.24 Aligned_cols=99 Identities=20% Similarity=0.262 Sum_probs=60.9
Q ss_pred HcCCcEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHH--------HHHhhCC
Q 008516 10 IKGAKVLMVGA-GGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARD--------AVLKFRP 80 (563)
Q Consensus 10 L~~~~VlvvGa-GgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~--------~l~~~np 80 (563)
++..||.|||+ |.+|.|+++.|...-.-+|..+- ...+..|+.-+++..- ...
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~--------------aS~~saGk~~~~~~~~~~~~~~p~~~~---- 78 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALG--------------ASSRSAGKKYKDAASWKQTETLPETEQ---- 78 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEE--------------ECTTTTTSBHHHHCCCCCSSCCCHHHH----
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEee--------------ccccccCCCHHHhcccccccccccccc----
Confidence 55678999995 88899999988775544443221 1445677764433100 000
Q ss_pred CceEEEeccCCCCCcchHh-hcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEecc
Q 008516 81 QMSITAHHANVKDPKFNVE-FFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGT 136 (563)
Q Consensus 81 ~v~I~~~~~~i~~~~~~~~-~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~gt 136 (563)
+..++. . +.+ .++++|+|+.|+....++.+..+. ...+..+||.++
T Consensus 79 ~~~v~~----~-----~~~~~~~~~Dvvf~alp~~~s~~~~~~~-~~~G~~VIDlSa 125 (381)
T 3hsk_A 79 DIVVQE----C-----KPEGNFLECDVVFSGLDADVAGDIEKSF-VEAGLAVVSNAK 125 (381)
T ss_dssp TCBCEE----S-----SSCTTGGGCSEEEECCCHHHHHHHHHHH-HHTTCEEEECCS
T ss_pred cceEEe----C-----chhhhcccCCEEEECCChhHHHHHHHHH-HhCCCEEEEcCC
Confidence 111111 1 111 368999999999988888776554 677888888764
No 477
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=85.06 E-value=1.2 Score=43.20 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=29.6
Q ss_pred HHHcCCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 8 EAIKGAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 8 ~kL~~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
..+++++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 54 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRS 54 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467788899998 68999999999999996 67887764
No 478
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=85.05 E-value=0.56 Score=47.35 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=31.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
..+|+|||+|..|..+|..|+..|..+++|+|.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 45799999999999999999999975799999764
No 479
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=85.00 E-value=0.81 Score=46.77 Aligned_cols=36 Identities=22% Similarity=0.451 Sum_probs=31.5
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.|.+++|.|||.|.+|..+++.|...|+ ++..+|..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 4778999999999999999999999997 67777743
No 480
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=84.92 E-value=3.1 Score=41.37 Aligned_cols=78 Identities=17% Similarity=0.134 Sum_probs=47.0
Q ss_pred CCcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCceEEEeccC
Q 008516 12 GAKVLMVG-AGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHAN 90 (563)
Q Consensus 12 ~~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v~I~~~~~~ 90 (563)
+++|+|.| +|.||+.+++.|...|. ++++++.+. +++. +...+ ..+. . .-+++.+..+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~r~~---~~~~-------------~~~~~-~~~~-~--~~~~~~~~~D 67 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDP---DNQK-------------KVSHL-LELQ-E--LGDLKIFRAD 67 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEESCT---TCTT-------------TTHHH-HHHG-G--GSCEEEEECC
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCc---chhh-------------hHHHH-HhcC-C--CCcEEEEecC
Confidence 67899999 79999999999999996 455544321 1110 00101 1111 1 1245556666
Q ss_pred CCCCcchHhhcccccEEEEc
Q 008516 91 VKDPKFNVEFFKQFNVVLNG 110 (563)
Q Consensus 91 i~~~~~~~~~~~~~dvVi~a 110 (563)
+.+...-.+.++++|+||.+
T Consensus 68 l~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 68 LTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp TTTSSSSHHHHTTCSEEEEE
T ss_pred CCChHHHHHHHcCCCEEEEe
Confidence 75543334567889999974
No 481
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.91 E-value=0.76 Score=46.61 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=29.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEe
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIID 43 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD 43 (563)
.|.+++|.|||+|.+|..+++.|...|. ++..+|
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d 172 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYD 172 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEC
Confidence 3678899999999999999999999996 577766
No 482
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.91 E-value=0.75 Score=47.06 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=30.5
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|.+++|.|||+|.+|..+++.|...|. ++.++|.
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 4678899999999999999999999986 6777763
No 483
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=84.88 E-value=0.72 Score=48.49 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=31.9
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
+...+|+|+|+|++|..+++.+..+|. +++++|...
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~ 205 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRP 205 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 457899999999999999999999997 799988543
No 484
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.85 E-value=0.8 Score=45.90 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=28.3
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 689999999999999999999997 58887743
No 485
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=84.81 E-value=0.68 Score=47.26 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=30.8
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|.+++|.|||+|.+|..+++.|...|. +++++|.
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 186 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTG 186 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEES
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECC
Confidence 3678899999999999999999999997 5888874
No 486
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.69 E-value=0.79 Score=46.05 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=27.7
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.||.|+|+|.+|+.++..|+..|. +++++|.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 379999999999999999999996 7888875
No 487
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.68 E-value=0.88 Score=45.96 Aligned_cols=31 Identities=39% Similarity=0.727 Sum_probs=25.9
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCCCeEEEE
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGFQDIHII 42 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gvg~I~ii 42 (563)
...||.|+|+|++|+.++..|+..|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 46789999999999999999999996 56664
No 488
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=84.65 E-value=1.1 Score=45.36 Aligned_cols=24 Identities=13% Similarity=0.051 Sum_probs=21.4
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHh
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALS 34 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~ 34 (563)
+..||.|||+|.+|...++.|...
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~ 27 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES 27 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS
T ss_pred CeEEEEEECchHHHHHHHHHHHhC
Confidence 346899999999999999999886
No 489
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=84.55 E-value=1.2 Score=41.08 Aligned_cols=29 Identities=28% Similarity=0.550 Sum_probs=24.2
Q ss_pred CcEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVG-AGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvG-aGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
++++|.| .|+||.++++.|+.. ++.++|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r 30 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGR 30 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEEC
Confidence 3688998 589999999999877 7888764
No 490
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=84.54 E-value=0.86 Score=46.66 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=30.4
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.|.+++|.|||.|.+|..+++.|...|+ ++..+|.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDI 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 4778899999999999999999999887 5777663
No 491
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=84.52 E-value=1.5 Score=44.24 Aligned_cols=36 Identities=8% Similarity=0.161 Sum_probs=26.7
Q ss_pred cCCcEEEECCcHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 008516 11 KGAKVLMVGAGGIGCELLKTLALSGF-QDIHIIDMDT 46 (563)
Q Consensus 11 ~~~~VlvvGaGgiG~ellknLal~Gv-g~I~iiD~D~ 46 (563)
+..||.|||+|.+|...++.|...+- .-+.+.|.+.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~ 40 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTL 40 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCS
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 45689999999999999999988753 2334556543
No 492
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=84.42 E-value=0.6 Score=47.27 Aligned_cols=36 Identities=14% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
+..|+|||+|.+|+.+|..|++.|. +++|+|.+..-
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCC
Confidence 4579999999999999999999997 69999977553
No 493
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.38 E-value=2.1 Score=45.48 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=31.8
Q ss_pred HcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCc
Q 008516 10 IKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDT 46 (563)
Q Consensus 10 L~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~ 46 (563)
+++++|+|+|.|+.|-.+++.|...|. ++++.|...
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence 568899999999999999999999996 689988643
No 494
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=84.37 E-value=1.2 Score=45.05 Aligned_cols=34 Identities=15% Similarity=0.394 Sum_probs=30.4
Q ss_pred HcCCcEEEECCcH-HHHHHHHHHHHhCCCeEEEEeC
Q 008516 10 IKGAKVLMVGAGG-IGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 10 L~~~~VlvvGaGg-iG~ellknLal~Gvg~I~iiD~ 44 (563)
|.+++++|||.|+ +|..+++.|...|. .+++.+.
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 6889999999998 69999999999998 5888864
No 495
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=84.34 E-value=0.84 Score=46.38 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
...|+|||+|..|+.+|..|++.|. +++|+|.+.+.
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4579999999999999999999998 69999976543
No 496
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.28 E-value=0.82 Score=46.53 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=31.0
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMD 45 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D 45 (563)
.|.+++|.|||+|.+|..+++.|...|+ ++...|.+
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~ 171 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRS 171 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 3678999999999999999999998887 57777743
No 497
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.25 E-value=0.77 Score=45.39 Aligned_cols=31 Identities=29% Similarity=0.529 Sum_probs=27.1
Q ss_pred CcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 13 AKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 13 ~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+|.|||+|.+|..+++.|+..|. +++++|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY-PLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC-CEEEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 379999999999999999999997 5777763
No 498
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=84.13 E-value=0.71 Score=50.23 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=26.9
Q ss_pred HHcCCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeC
Q 008516 9 AIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDM 44 (563)
Q Consensus 9 kL~~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~ 44 (563)
.+.+++++|+|+||+|..+++.|+..|. ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4677899999999999999999999998 7888763
No 499
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=84.09 E-value=2.3 Score=43.52 Aligned_cols=86 Identities=15% Similarity=0.308 Sum_probs=53.2
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhC---------CCeEEEEeCCccCcccCccccCCCCCCCCchHHHHHHHHHHhhCCCc
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSG---------FQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQM 82 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~G---------vg~I~iiD~D~Ve~sNLnRqfLf~~~diGk~Ka~va~~~l~~~np~v 82 (563)
..||.|+|+|.+|..+++.|.... +.-..+.|.+. .| ..+++. .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~------~~-----~~~~~~----------------~ 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDP------RK-----PRAIPQ----------------E 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCT------TS-----CCSSCG----------------G
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCH------HH-----hhccCc----------------c
Confidence 458999999999999999998753 22234555442 11 111110 0
Q ss_pred eEEEeccCCCCCcchHhhcccccEEEEccCCHHHHHHHHHHHHhcCCCEEEe
Q 008516 83 SITAHHANVKDPKFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVES 134 (563)
Q Consensus 83 ~I~~~~~~i~~~~~~~~~~~~~dvVi~alDn~~ar~~in~~c~~~~~pli~~ 134 (563)
. ...++ ++++ ..|+|+.++.+.......-..+.++|+.++.+
T Consensus 56 ~---~~~d~------~~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 56 L---LRAEP------FDLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp G---EESSC------CCCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred c---ccCCH------HHHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 0 11122 1334 89999999988754444455678899988774
No 500
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=84.06 E-value=0.82 Score=46.50 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHHHhCCCeEEEEeCCccC
Q 008516 12 GAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIE 48 (563)
Q Consensus 12 ~~~VlvvGaGgiG~ellknLal~Gvg~I~iiD~D~Ve 48 (563)
...|+|||+|..|+.+|..|++.|. +++|+|.+.+-
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCC
Confidence 3579999999999999999999997 69999977653
Done!