Query 008519
Match_columns 563
No_of_seqs 187 out of 713
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 05:27:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ii2_A Phosphoenolpyruvate car 100.0 1E-111 5E-116 912.6 33.8 371 142-515 2-392 (524)
2 2olr_A Phosphoenolpyruvate car 100.0 3E-110 1E-114 902.0 34.4 377 131-517 9-421 (540)
3 1ytm_A Phosphoenolpyruvate car 100.0 4E-110 1E-114 902.4 33.2 394 131-531 4-438 (532)
4 1j3b_A ATP-dependent phosphoen 100.0 4E-101 1E-105 831.7 34.3 377 133-514 3-403 (529)
5 2faf_A Phosphoenolpyruvate car 99.9 7.4E-23 2.5E-27 221.4 28.2 332 140-481 24-445 (608)
6 2zci_A Phosphoenolpyruvate car 99.9 4.9E-23 1.7E-27 223.2 25.0 334 140-481 32-443 (610)
7 3moe_A Phosphoenolpyruvate car 99.9 5.6E-20 1.9E-24 199.3 26.4 332 140-474 41-457 (624)
8 3tqf_A HPR(Ser) kinase; transf 97.7 1.1E-05 3.8E-10 77.3 2.4 49 321-370 4-56 (181)
9 1ko7_A HPR kinase/phosphatase; 97.5 3.8E-05 1.3E-09 78.9 3.8 49 318-367 129-180 (314)
10 1knx_A Probable HPR(Ser) kinas 97.5 3E-05 1E-09 79.6 2.9 47 320-367 134-183 (312)
11 2qmh_A HPR kinase/phosphorylas 97.3 8.9E-05 3.1E-09 72.2 2.3 49 318-367 19-70 (205)
12 3tr0_A Guanylate kinase, GMP k 94.6 0.011 3.8E-07 53.8 1.7 20 333-352 6-25 (205)
13 4gp7_A Metallophosphoesterase; 94.5 0.0091 3.1E-07 54.3 0.9 21 332-352 7-27 (171)
14 1zp6_A Hypothetical protein AT 94.4 0.011 3.9E-07 53.2 1.4 21 332-352 7-27 (191)
15 1kgd_A CASK, peripheral plasma 94.4 0.013 4.3E-07 53.5 1.7 20 333-352 4-23 (180)
16 1znw_A Guanylate kinase, GMP k 94.2 0.016 5.4E-07 54.0 1.8 21 332-352 18-38 (207)
17 1qhx_A CPT, protein (chloramph 94.2 0.014 4.8E-07 52.0 1.5 19 334-352 3-21 (178)
18 3uie_A Adenylyl-sulfate kinase 94.1 0.014 4.8E-07 53.9 1.4 21 332-352 23-43 (200)
19 2j41_A Guanylate kinase; GMP, 93.9 0.018 6.2E-07 52.3 1.7 20 333-352 5-24 (207)
20 3tau_A Guanylate kinase, GMP k 93.9 0.019 6.4E-07 53.7 1.7 21 332-352 6-26 (208)
21 3a00_A Guanylate kinase, GMP k 93.8 0.016 5.5E-07 53.0 1.1 19 334-352 1-19 (186)
22 1z6g_A Guanylate kinase; struc 93.8 0.017 5.8E-07 54.7 1.3 21 332-352 21-41 (218)
23 1lvg_A Guanylate kinase, GMP k 93.7 0.016 5.5E-07 54.0 0.9 20 333-352 3-22 (198)
24 1s96_A Guanylate kinase, GMP k 93.7 0.021 7.2E-07 54.8 1.8 21 332-352 14-34 (219)
25 3c8u_A Fructokinase; YP_612366 93.7 0.019 6.5E-07 53.4 1.4 21 332-352 20-40 (208)
26 1kag_A SKI, shikimate kinase I 93.7 0.016 5.6E-07 51.4 0.9 19 334-352 4-22 (173)
27 3lnc_A Guanylate kinase, GMP k 93.3 0.024 8.2E-07 53.4 1.5 21 332-352 25-45 (231)
28 4eun_A Thermoresistant glucoki 93.3 0.026 8.8E-07 52.1 1.6 21 332-352 27-47 (200)
29 2qor_A Guanylate kinase; phosp 93.2 0.021 7.2E-07 52.9 0.9 20 333-352 11-30 (204)
30 1knq_A Gluconate kinase; ALFA/ 93.2 0.025 8.4E-07 50.5 1.3 20 333-352 7-26 (175)
31 3ec2_A DNA replication protein 93.2 0.023 7.7E-07 51.3 1.0 20 333-352 37-56 (180)
32 3asz_A Uridine kinase; cytidin 93.1 0.027 9.4E-07 51.8 1.4 21 332-352 4-24 (211)
33 3tif_A Uncharacterized ABC tra 92.9 0.034 1.2E-06 53.7 1.9 21 332-352 29-49 (235)
34 2bdt_A BH3686; alpha-beta prot 92.9 0.024 8E-07 51.4 0.6 19 334-352 2-20 (189)
35 3vaa_A Shikimate kinase, SK; s 92.8 0.034 1.2E-06 51.2 1.6 21 332-352 23-43 (199)
36 2pcj_A ABC transporter, lipopr 92.8 0.034 1.2E-06 53.3 1.6 21 332-352 28-48 (224)
37 1htw_A HI0065; nucleotide-bind 92.8 0.034 1.2E-06 50.9 1.6 21 332-352 31-51 (158)
38 2ehv_A Hypothetical protein PH 92.7 0.034 1.2E-06 51.8 1.5 21 332-352 28-48 (251)
39 3kb2_A SPBC2 prophage-derived 92.7 0.034 1.2E-06 48.8 1.4 17 336-352 3-19 (173)
40 1kht_A Adenylate kinase; phosp 92.6 0.036 1.2E-06 49.4 1.4 19 334-352 3-21 (192)
41 4a74_A DNA repair and recombin 92.5 0.036 1.2E-06 51.0 1.2 21 332-352 23-43 (231)
42 2rhm_A Putative kinase; P-loop 92.5 0.04 1.4E-06 49.5 1.5 19 334-352 5-23 (193)
43 3lw7_A Adenylate kinase relate 92.4 0.036 1.2E-06 48.1 1.2 17 336-352 3-19 (179)
44 3trf_A Shikimate kinase, SK; a 92.4 0.04 1.4E-06 49.5 1.5 19 334-352 5-23 (185)
45 1b0u_A Histidine permease; ABC 92.4 0.044 1.5E-06 53.9 1.9 21 332-352 30-50 (262)
46 3ney_A 55 kDa erythrocyte memb 92.3 0.046 1.6E-06 52.3 1.9 21 332-352 17-37 (197)
47 2pez_A Bifunctional 3'-phospho 92.1 0.041 1.4E-06 49.5 1.2 21 332-352 3-23 (179)
48 2cbz_A Multidrug resistance-as 92.1 0.051 1.7E-06 52.6 1.9 21 332-352 29-49 (237)
49 2kjq_A DNAA-related protein; s 91.9 0.057 1.9E-06 48.6 1.8 20 333-352 35-54 (149)
50 1ly1_A Polynucleotide kinase; 91.9 0.046 1.6E-06 48.3 1.2 17 336-352 4-20 (181)
51 2qt1_A Nicotinamide riboside k 91.9 0.054 1.8E-06 49.9 1.7 37 332-368 19-60 (207)
52 3iij_A Coilin-interacting nucl 91.8 0.046 1.6E-06 49.1 1.2 20 333-352 10-29 (180)
53 1g6h_A High-affinity branched- 91.8 0.051 1.7E-06 53.1 1.5 21 332-352 31-51 (257)
54 3b85_A Phosphate starvation-in 91.8 0.059 2E-06 51.4 2.0 21 332-352 20-40 (208)
55 2olj_A Amino acid ABC transpor 91.8 0.057 2E-06 53.4 1.9 21 332-352 48-68 (263)
56 2ff7_A Alpha-hemolysin translo 91.7 0.053 1.8E-06 52.9 1.5 21 332-352 33-53 (247)
57 2pze_A Cystic fibrosis transme 91.7 0.053 1.8E-06 52.1 1.5 21 332-352 32-52 (229)
58 2d2e_A SUFC protein; ABC-ATPas 91.7 0.054 1.8E-06 52.7 1.5 21 332-352 27-47 (250)
59 1ji0_A ABC transporter; ATP bi 91.7 0.054 1.8E-06 52.4 1.5 21 332-352 30-50 (240)
60 1nks_A Adenylate kinase; therm 91.6 0.048 1.7E-06 48.6 1.1 17 336-352 3-19 (194)
61 2cdn_A Adenylate kinase; phosp 91.6 0.063 2.1E-06 49.2 1.8 21 332-352 18-38 (201)
62 4g1u_C Hemin import ATP-bindin 91.6 0.055 1.9E-06 53.5 1.5 21 332-352 35-55 (266)
63 1mv5_A LMRA, multidrug resista 91.6 0.056 1.9E-06 52.3 1.5 21 332-352 26-46 (243)
64 2wwf_A Thymidilate kinase, put 91.6 0.063 2.1E-06 49.0 1.8 20 333-352 9-28 (212)
65 2ixe_A Antigen peptide transpo 91.5 0.064 2.2E-06 53.1 1.9 21 332-352 43-63 (271)
66 3gfo_A Cobalt import ATP-bindi 91.5 0.057 1.9E-06 53.8 1.5 21 332-352 32-52 (275)
67 1cke_A CK, MSSA, protein (cyti 91.5 0.057 1.9E-06 50.0 1.4 19 334-352 5-23 (227)
68 3fvq_A Fe(3+) IONS import ATP- 91.5 0.066 2.2E-06 55.8 2.0 21 332-352 28-48 (359)
69 3t61_A Gluconokinase; PSI-biol 91.5 0.046 1.6E-06 50.2 0.8 19 334-352 18-36 (202)
70 1vpl_A ABC transporter, ATP-bi 91.4 0.066 2.3E-06 52.7 1.9 21 332-352 39-59 (256)
71 2ghi_A Transport protein; mult 91.4 0.067 2.3E-06 52.5 1.9 21 332-352 44-64 (260)
72 2yz2_A Putative ABC transporte 91.4 0.067 2.3E-06 52.6 1.9 21 332-352 31-51 (266)
73 2zu0_C Probable ATP-dependent 91.3 0.069 2.3E-06 52.6 1.9 21 332-352 44-64 (267)
74 1nn5_A Similar to deoxythymidy 91.1 0.077 2.6E-06 48.4 1.9 20 333-352 8-27 (215)
75 1sgw_A Putative ABC transporte 91.1 0.055 1.9E-06 52.0 0.9 21 332-352 33-53 (214)
76 1gvn_B Zeta; postsegregational 91.0 0.066 2.2E-06 53.2 1.4 20 333-352 32-51 (287)
77 2ihy_A ABC transporter, ATP-bi 91.0 0.068 2.3E-06 53.2 1.5 21 332-352 45-65 (279)
78 2vp4_A Deoxynucleoside kinase; 91.0 0.075 2.6E-06 50.4 1.7 21 332-352 18-38 (230)
79 2plr_A DTMP kinase, probable t 91.0 0.062 2.1E-06 48.7 1.1 19 334-352 4-22 (213)
80 2nq2_C Hypothetical ABC transp 90.9 0.071 2.4E-06 52.2 1.6 21 332-352 29-49 (253)
81 1rj9_A FTSY, signal recognitio 90.9 0.069 2.3E-06 53.9 1.5 20 333-352 101-120 (304)
82 3cm0_A Adenylate kinase; ATP-b 90.9 0.053 1.8E-06 48.6 0.6 19 334-352 4-22 (186)
83 2yyz_A Sugar ABC transporter, 90.9 0.079 2.7E-06 55.0 1.9 21 332-352 27-47 (359)
84 3aez_A Pantothenate kinase; tr 90.8 0.068 2.3E-06 54.1 1.3 21 332-352 88-108 (312)
85 2jeo_A Uridine-cytidine kinase 90.8 0.07 2.4E-06 50.9 1.3 21 332-352 23-43 (245)
86 3rlf_A Maltose/maltodextrin im 90.8 0.081 2.8E-06 55.6 1.9 21 332-352 27-47 (381)
87 2yvu_A Probable adenylyl-sulfa 90.8 0.073 2.5E-06 48.1 1.4 20 333-352 12-31 (186)
88 2it1_A 362AA long hypothetical 90.7 0.083 2.8E-06 54.9 1.9 21 332-352 27-47 (362)
89 2qi9_C Vitamin B12 import ATP- 90.7 0.076 2.6E-06 52.0 1.5 21 332-352 24-44 (249)
90 2w0m_A SSO2452; RECA, SSPF, un 90.7 0.077 2.6E-06 48.4 1.5 21 332-352 21-41 (235)
91 1v43_A Sugar-binding transport 90.6 0.084 2.9E-06 55.0 1.9 21 332-352 35-55 (372)
92 2v54_A DTMP kinase, thymidylat 90.6 0.087 3E-06 47.8 1.7 20 333-352 3-22 (204)
93 2bbw_A Adenylate kinase 4, AK4 90.4 0.082 2.8E-06 50.3 1.5 19 334-352 27-45 (246)
94 1z47_A CYSA, putative ABC-tran 90.4 0.081 2.8E-06 54.9 1.5 21 332-352 39-59 (355)
95 2eyu_A Twitching motility prot 90.4 0.082 2.8E-06 52.0 1.5 21 332-352 23-43 (261)
96 2cvh_A DNA repair and recombin 90.4 0.092 3.2E-06 47.9 1.7 21 332-352 18-38 (220)
97 2vli_A Antibiotic resistance p 90.4 0.081 2.8E-06 47.1 1.3 19 334-352 5-23 (183)
98 1rz3_A Hypothetical protein rb 90.4 0.083 2.9E-06 48.9 1.4 20 333-352 21-40 (201)
99 1g29_1 MALK, maltose transport 90.3 0.083 2.8E-06 55.0 1.5 21 332-352 27-47 (372)
100 2c95_A Adenylate kinase 1; tra 90.3 0.098 3.4E-06 47.0 1.8 20 333-352 8-27 (196)
101 2bbs_A Cystic fibrosis transme 90.3 0.1 3.4E-06 52.4 2.0 21 332-352 62-82 (290)
102 2v9p_A Replication protein E1; 90.3 0.099 3.4E-06 53.2 2.0 21 332-352 124-144 (305)
103 1jbk_A CLPB protein; beta barr 90.2 0.096 3.3E-06 45.5 1.6 19 334-352 43-61 (195)
104 1ex7_A Guanylate kinase; subst 90.2 0.074 2.5E-06 50.2 0.9 18 335-352 2-19 (186)
105 2qz4_A Paraplegin; AAA+, SPG7, 90.2 0.19 6.5E-06 47.2 3.7 44 303-352 13-57 (262)
106 2pjz_A Hypothetical protein ST 90.1 0.098 3.4E-06 51.7 1.8 20 332-352 29-48 (263)
107 1n0w_A DNA repair protein RAD5 90.1 0.092 3.1E-06 48.7 1.5 21 332-352 22-42 (243)
108 4e22_A Cytidylate kinase; P-lo 90.1 0.097 3.3E-06 50.5 1.7 21 332-352 25-45 (252)
109 2i3b_A HCR-ntpase, human cance 90.1 0.08 2.7E-06 49.7 1.0 19 334-352 1-19 (189)
110 3bos_A Putative DNA replicatio 90.1 0.098 3.4E-06 47.8 1.6 20 333-352 51-70 (242)
111 2bwj_A Adenylate kinase 5; pho 90.1 0.05 1.7E-06 49.0 -0.3 19 334-352 12-30 (199)
112 2jaq_A Deoxyguanosine kinase; 90.1 0.079 2.7E-06 47.7 0.9 17 336-352 2-18 (205)
113 1y63_A LMAJ004144AAA protein; 90.0 0.1 3.4E-06 47.6 1.7 20 333-352 9-28 (184)
114 3d31_A Sulfate/molybdate ABC t 90.0 0.076 2.6E-06 54.9 0.9 21 332-352 24-44 (348)
115 2ze6_A Isopentenyl transferase 89.9 0.082 2.8E-06 51.3 0.9 29 336-364 3-36 (253)
116 1ye8_A Protein THEP1, hypothet 89.8 0.1 3.5E-06 48.3 1.5 17 336-352 2-18 (178)
117 1gtv_A TMK, thymidylate kinase 89.8 0.057 2E-06 49.3 -0.2 17 336-352 2-18 (214)
118 1m7g_A Adenylylsulfate kinase; 89.7 0.099 3.4E-06 48.5 1.4 21 332-352 23-43 (211)
119 1oxx_K GLCV, glucose, ABC tran 89.7 0.071 2.4E-06 55.1 0.4 21 332-352 29-49 (353)
120 2p65_A Hypothetical protein PF 89.6 0.094 3.2E-06 45.8 1.1 19 334-352 43-61 (187)
121 3tui_C Methionine import ATP-b 89.6 0.11 3.9E-06 54.2 1.9 21 332-352 52-72 (366)
122 2p5t_B PEZT; postsegregational 89.6 0.085 2.9E-06 50.8 0.9 20 333-352 31-50 (253)
123 1pui_A ENGB, probable GTP-bind 89.6 0.12 4E-06 46.9 1.7 21 332-352 24-44 (210)
124 1tev_A UMP-CMP kinase; ploop, 89.6 0.096 3.3E-06 46.7 1.1 19 334-352 3-21 (196)
125 3b9q_A Chloroplast SRP recepto 89.5 0.094 3.2E-06 52.8 1.1 47 303-352 71-118 (302)
126 2lkc_A Translation initiation 89.5 0.14 4.9E-06 44.6 2.1 24 329-352 3-26 (178)
127 3nh6_A ATP-binding cassette SU 89.2 0.095 3.3E-06 53.2 0.9 21 332-352 78-98 (306)
128 1sq5_A Pantothenate kinase; P- 89.2 0.12 3.9E-06 51.7 1.5 21 332-352 78-98 (308)
129 3fb4_A Adenylate kinase; psych 89.2 0.1 3.4E-06 48.1 1.0 17 336-352 2-18 (216)
130 1ixz_A ATP-dependent metallopr 89.1 0.1 3.5E-06 49.5 1.0 16 337-352 52-67 (254)
131 1via_A Shikimate kinase; struc 89.0 0.11 3.6E-06 46.6 0.9 17 336-352 6-22 (175)
132 2z0h_A DTMP kinase, thymidylat 89.0 0.11 3.7E-06 46.8 1.0 17 336-352 2-18 (197)
133 2onk_A Molybdate/tungstate ABC 88.9 0.14 4.7E-06 49.9 1.8 20 332-352 23-42 (240)
134 3dl0_A Adenylate kinase; phosp 88.9 0.11 3.8E-06 48.0 1.0 17 336-352 2-18 (216)
135 2w58_A DNAI, primosome compone 88.8 0.13 4.5E-06 46.8 1.5 18 335-352 55-72 (202)
136 3gd7_A Fusion complex of cysti 88.8 0.15 5.1E-06 53.5 2.0 21 332-352 45-65 (390)
137 2pbr_A DTMP kinase, thymidylat 88.7 0.12 4.2E-06 46.0 1.2 17 336-352 2-18 (195)
138 1aky_A Adenylate kinase; ATP:A 88.7 0.14 4.8E-06 47.6 1.6 20 333-352 3-22 (220)
139 1jjv_A Dephospho-COA kinase; P 88.6 0.13 4.3E-06 47.2 1.2 17 336-352 4-20 (206)
140 1lv7_A FTSH; alpha/beta domain 88.6 0.13 4.4E-06 48.9 1.3 18 335-352 46-63 (257)
141 3b9p_A CG5977-PA, isoform A; A 88.6 0.14 4.7E-06 49.6 1.5 21 332-352 52-72 (297)
142 3cf0_A Transitional endoplasmi 88.6 0.15 5.2E-06 50.3 1.8 21 332-352 47-67 (301)
143 1e6c_A Shikimate kinase; phosp 88.5 0.12 4.1E-06 45.6 0.9 18 335-352 3-20 (173)
144 3syl_A Protein CBBX; photosynt 88.4 0.18 6.1E-06 48.8 2.2 21 332-352 65-85 (309)
145 1nlf_A Regulatory protein REPA 88.4 0.15 5.2E-06 49.5 1.6 21 332-352 28-48 (279)
146 3e70_C DPA, signal recognition 88.4 0.12 4.2E-06 52.7 1.1 21 332-352 127-147 (328)
147 2if2_A Dephospho-COA kinase; a 88.3 0.15 5.1E-06 46.5 1.5 17 336-352 3-19 (204)
148 3h4m_A Proteasome-activating n 88.2 0.17 5.7E-06 48.6 1.8 20 333-352 50-69 (285)
149 1zak_A Adenylate kinase; ATP:A 88.2 0.14 4.9E-06 47.6 1.3 19 334-352 5-23 (222)
150 2pt5_A Shikimate kinase, SK; a 88.1 0.14 4.8E-06 45.0 1.1 17 336-352 2-18 (168)
151 1ukz_A Uridylate kinase; trans 88.1 0.15 5.2E-06 46.5 1.4 19 334-352 15-33 (203)
152 2gj8_A MNME, tRNA modification 88.1 0.16 5.4E-06 45.3 1.5 20 333-352 3-22 (172)
153 1oix_A RAS-related protein RAB 88.0 0.2 6.8E-06 45.5 2.1 17 336-352 31-47 (191)
154 1zd8_A GTP:AMP phosphotransfer 88.0 0.17 5.7E-06 47.5 1.6 19 334-352 7-25 (227)
155 3nwj_A ATSK2; P loop, shikimat 87.9 0.13 4.5E-06 50.5 0.9 19 334-352 48-66 (250)
156 1qf9_A UMP/CMP kinase, protein 87.9 0.15 5.3E-06 45.2 1.3 18 335-352 7-24 (194)
157 2dr3_A UPF0273 protein PH0284; 87.7 0.18 6E-06 46.8 1.6 21 332-352 21-41 (247)
158 2iyv_A Shikimate kinase, SK; t 87.7 0.14 4.9E-06 45.9 1.0 18 335-352 3-20 (184)
159 2dpy_A FLII, flagellum-specifi 87.7 0.19 6.4E-06 53.3 2.0 20 333-352 156-175 (438)
160 3n70_A Transport activator; si 87.6 0.16 5.4E-06 44.7 1.2 20 333-352 23-42 (145)
161 1cr0_A DNA primase/helicase; R 87.6 0.19 6.5E-06 48.9 1.8 21 332-352 33-53 (296)
162 2obl_A ESCN; ATPase, hydrolase 87.6 0.19 6.3E-06 51.7 1.8 20 333-352 70-89 (347)
163 1uf9_A TT1252 protein; P-loop, 87.5 0.18 6.1E-06 45.5 1.5 19 334-352 8-26 (203)
164 2x8a_A Nuclear valosin-contain 87.4 0.15 5.1E-06 50.2 0.9 16 337-352 47-62 (274)
165 1iy2_A ATP-dependent metallopr 87.3 0.15 5.2E-06 49.3 1.0 16 337-352 76-91 (278)
166 2og2_A Putative signal recogni 87.3 0.16 5.3E-06 52.8 1.1 21 332-352 155-175 (359)
167 3sop_A Neuronal-specific septi 87.3 0.19 6.5E-06 49.6 1.6 17 336-352 4-20 (270)
168 1vht_A Dephospho-COA kinase; s 87.1 0.19 6.3E-06 46.6 1.3 19 334-352 4-22 (218)
169 4eaq_A DTMP kinase, thymidylat 87.1 0.18 6.3E-06 48.2 1.3 20 333-352 25-44 (229)
170 3uk6_A RUVB-like 2; hexameric 87.0 0.2 6.9E-06 49.7 1.6 19 334-352 70-88 (368)
171 1in4_A RUVB, holliday junction 86.9 0.16 5.6E-06 50.9 0.9 18 335-352 52-69 (334)
172 3co5_A Putative two-component 86.8 0.18 6E-06 44.4 0.9 19 334-352 27-45 (143)
173 2f1r_A Molybdopterin-guanine d 86.8 0.12 4.2E-06 47.8 -0.1 18 335-352 3-20 (171)
174 3a4m_A L-seryl-tRNA(SEC) kinas 86.7 0.19 6.5E-06 48.6 1.2 19 334-352 4-22 (260)
175 3tlx_A Adenylate kinase 2; str 86.7 0.2 6.9E-06 48.0 1.4 19 334-352 29-47 (243)
176 2gza_A Type IV secretion syste 86.6 0.19 6.5E-06 51.5 1.2 21 332-352 173-193 (361)
177 1u0l_A Probable GTPase ENGC; p 86.6 0.22 7.6E-06 49.5 1.7 20 333-352 168-187 (301)
178 1njg_A DNA polymerase III subu 86.5 0.22 7.6E-06 44.6 1.5 18 335-352 46-63 (250)
179 1odf_A YGR205W, hypothetical 3 86.4 0.2 7E-06 50.0 1.3 20 333-352 30-49 (290)
180 2yv5_A YJEQ protein; hydrolase 86.4 0.23 7.8E-06 49.6 1.7 20 333-352 164-183 (302)
181 3kta_A Chromosome segregation 86.3 0.24 8.1E-06 44.4 1.5 16 336-351 28-43 (182)
182 1lw7_A Transcriptional regulat 86.3 0.17 5.8E-06 51.4 0.6 19 334-352 170-188 (365)
183 2px0_A Flagellar biosynthesis 86.0 0.25 8.4E-06 49.5 1.7 21 332-352 103-123 (296)
184 3b60_A Lipid A export ATP-bind 86.0 0.26 9.1E-06 53.4 2.0 21 332-352 367-387 (582)
185 2chg_A Replication factor C sm 86.0 0.21 7.1E-06 44.5 1.0 17 336-352 40-56 (226)
186 1ltq_A Polynucleotide kinase; 86.0 0.22 7.4E-06 48.4 1.2 18 335-352 3-20 (301)
187 2yl4_A ATP-binding cassette SU 86.0 0.27 9.4E-06 53.4 2.1 21 332-352 368-388 (595)
188 1zuh_A Shikimate kinase; alpha 85.9 0.23 8E-06 43.9 1.3 18 335-352 8-25 (168)
189 2ce2_X GTPase HRAS; signaling 85.9 0.26 9E-06 41.7 1.6 17 336-352 5-21 (166)
190 2f9l_A RAB11B, member RAS onco 85.8 0.24 8.3E-06 44.8 1.4 17 336-352 7-23 (199)
191 2zej_A Dardarin, leucine-rich 85.7 0.25 8.4E-06 44.2 1.4 17 336-352 4-20 (184)
192 1a7j_A Phosphoribulokinase; tr 85.5 0.27 9.2E-06 49.0 1.6 19 334-352 5-23 (290)
193 1d2n_A N-ethylmaleimide-sensit 85.5 0.22 7.6E-06 47.8 1.0 18 335-352 65-82 (272)
194 3cr8_A Sulfate adenylyltranfer 85.5 0.18 6.1E-06 55.2 0.3 21 332-352 367-387 (552)
195 1nrj_B SR-beta, signal recogni 85.4 0.32 1.1E-05 44.4 2.0 19 334-352 12-30 (218)
196 2wji_A Ferrous iron transport 85.4 0.27 9.1E-06 43.2 1.4 17 336-352 5-21 (165)
197 1e4v_A Adenylate kinase; trans 85.4 0.24 8.1E-06 46.0 1.1 17 336-352 2-18 (214)
198 1l8q_A Chromosomal replication 85.4 0.22 7.6E-06 49.0 1.0 19 334-352 37-55 (324)
199 3eie_A Vacuolar protein sortin 85.4 0.26 9.1E-06 48.9 1.5 19 334-352 51-69 (322)
200 4a82_A Cystic fibrosis transme 85.4 0.29 9.8E-06 53.2 1.9 21 332-352 365-385 (578)
201 2pt7_A CAG-ALFA; ATPase, prote 85.3 0.24 8.2E-06 50.3 1.2 21 332-352 169-189 (330)
202 3b5x_A Lipid A export ATP-bind 85.1 0.29 9.8E-06 53.1 1.8 21 332-352 367-387 (582)
203 2ewv_A Twitching motility prot 85.1 0.28 9.5E-06 50.6 1.6 21 332-352 134-154 (372)
204 3be4_A Adenylate kinase; malar 85.0 0.3 1E-05 45.6 1.6 19 334-352 5-23 (217)
205 2yhs_A FTSY, cell division pro 84.9 0.28 9.5E-06 53.5 1.5 21 332-352 291-311 (503)
206 2qby_A CDC6 homolog 1, cell di 84.9 0.27 9.2E-06 48.2 1.3 20 333-352 44-63 (386)
207 1np6_A Molybdopterin-guanine d 84.9 0.3 1E-05 45.4 1.5 18 335-352 7-24 (174)
208 1ofh_A ATP-dependent HSL prote 84.8 0.25 8.4E-06 47.4 1.0 20 333-352 49-68 (310)
209 1kao_A RAP2A; GTP-binding prot 84.8 0.3 1E-05 41.5 1.4 17 336-352 5-21 (167)
210 2xb4_A Adenylate kinase; ATP-b 84.8 0.25 8.4E-06 46.5 0.9 17 336-352 2-18 (223)
211 2rcn_A Probable GTPase ENGC; Y 84.8 0.3 1E-05 50.8 1.7 20 333-352 214-233 (358)
212 1pzn_A RAD51, DNA repair and r 84.7 0.27 9.1E-06 50.3 1.2 21 332-352 129-149 (349)
213 1xwi_A SKD1 protein; VPS4B, AA 84.7 0.29 1E-05 49.0 1.5 19 334-352 45-63 (322)
214 1p5z_B DCK, deoxycytidine kina 84.7 0.29 9.8E-06 47.1 1.3 21 332-352 22-42 (263)
215 1ak2_A Adenylate kinase isoenz 84.6 0.33 1.1E-05 45.8 1.7 20 333-352 15-34 (233)
216 3qf4_B Uncharacterized ABC tra 84.6 0.35 1.2E-05 52.8 2.1 21 332-352 379-399 (598)
217 3ux8_A Excinuclease ABC, A sub 84.6 0.29 1E-05 53.9 1.6 20 332-351 42-61 (670)
218 2wjg_A FEOB, ferrous iron tran 84.6 0.31 1.1E-05 43.0 1.4 18 335-352 8-25 (188)
219 1vma_A Cell division protein F 84.5 0.27 9.2E-06 49.7 1.1 43 304-352 79-122 (306)
220 3ux8_A Excinuclease ABC, A sub 84.5 0.3 1E-05 53.9 1.6 20 332-351 346-365 (670)
221 1z2a_A RAS-related protein RAB 84.5 0.32 1.1E-05 41.7 1.4 17 336-352 7-23 (168)
222 1u8z_A RAS-related protein RAL 84.5 0.32 1.1E-05 41.4 1.4 17 336-352 6-22 (168)
223 4fcw_A Chaperone protein CLPB; 84.3 0.29 9.9E-06 47.3 1.2 18 335-352 48-65 (311)
224 1yqt_A RNAse L inhibitor; ATP- 84.3 0.34 1.2E-05 52.5 1.9 21 332-352 45-65 (538)
225 1xjc_A MOBB protein homolog; s 84.3 0.31 1E-05 45.6 1.3 18 335-352 5-22 (169)
226 3q72_A GTP-binding protein RAD 84.3 0.34 1.2E-05 41.6 1.6 17 336-352 4-20 (166)
227 3lda_A DNA repair protein RAD5 84.3 0.32 1.1E-05 51.1 1.6 21 332-352 176-196 (400)
228 2dyk_A GTP-binding protein; GT 84.3 0.33 1.1E-05 41.4 1.4 17 336-352 3-19 (161)
229 1svm_A Large T antigen; AAA+ f 84.2 0.34 1.1E-05 50.6 1.7 21 332-352 167-187 (377)
230 1ek0_A Protein (GTP-binding pr 84.2 0.33 1.1E-05 41.5 1.4 17 336-352 5-21 (170)
231 1t9h_A YLOQ, probable GTPase E 84.2 0.18 6.2E-06 51.3 -0.3 21 332-352 171-191 (307)
232 1g8f_A Sulfate adenylyltransfe 84.2 0.23 7.7E-06 54.1 0.4 21 332-352 393-413 (511)
233 1uj2_A Uridine-cytidine kinase 84.1 0.3 1E-05 46.7 1.2 18 335-352 23-40 (252)
234 3tqc_A Pantothenate kinase; bi 84.1 0.29 1E-05 50.0 1.2 17 336-352 94-110 (321)
235 1c1y_A RAS-related protein RAP 84.1 0.34 1.2E-05 41.4 1.4 17 336-352 5-21 (167)
236 3ozx_A RNAse L inhibitor; ATP 84.0 0.36 1.2E-05 52.5 1.9 29 323-352 15-43 (538)
237 2r62_A Cell division protease 83.9 0.14 4.8E-06 48.7 -1.2 18 335-352 45-62 (268)
238 3t15_A Ribulose bisphosphate c 83.8 0.34 1.1E-05 47.9 1.5 18 335-352 37-54 (293)
239 1g16_A RAS-related protein SEC 83.8 0.37 1.3E-05 41.3 1.6 17 336-352 5-21 (170)
240 1ky3_A GTP-binding protein YPT 83.8 0.35 1.2E-05 42.0 1.4 17 336-352 10-26 (182)
241 3q85_A GTP-binding protein REM 83.8 0.35 1.2E-05 41.7 1.4 17 336-352 4-20 (169)
242 3hws_A ATP-dependent CLP prote 83.8 0.28 9.6E-06 49.4 0.9 20 333-352 50-69 (363)
243 3ake_A Cytidylate kinase; CMP 83.8 0.32 1.1E-05 44.0 1.2 17 336-352 4-20 (208)
244 3zvl_A Bifunctional polynucleo 83.7 0.36 1.2E-05 50.4 1.7 20 333-352 257-276 (416)
245 2fn4_A P23, RAS-related protei 83.6 0.38 1.3E-05 41.7 1.5 18 335-352 10-27 (181)
246 2npi_A Protein CLP1; CLP1-PCF1 83.6 0.34 1.2E-05 51.7 1.5 21 332-352 136-156 (460)
247 1z08_A RAS-related protein RAB 83.6 0.36 1.2E-05 41.5 1.4 17 336-352 8-24 (170)
248 2ged_A SR-beta, signal recogni 83.6 0.35 1.2E-05 42.9 1.4 19 334-352 48-66 (193)
249 2nzj_A GTP-binding protein REM 83.6 0.36 1.2E-05 41.7 1.4 17 336-352 6-22 (175)
250 2qgz_A Helicase loader, putati 83.5 0.33 1.1E-05 48.6 1.3 19 334-352 152-170 (308)
251 3j16_B RLI1P; ribosome recycli 83.5 0.39 1.3E-05 53.1 1.9 21 332-352 101-121 (608)
252 2v1u_A Cell division control p 83.4 0.28 9.5E-06 48.2 0.7 20 333-352 43-62 (387)
253 1sxj_C Activator 1 40 kDa subu 83.4 0.31 1.1E-05 48.5 1.1 16 337-352 49-64 (340)
254 3jvv_A Twitching mobility prot 83.3 0.36 1.2E-05 49.9 1.5 19 334-352 123-141 (356)
255 2vf7_A UVRA2, excinuclease ABC 83.3 0.51 1.7E-05 54.3 2.8 35 319-353 13-55 (842)
256 1tf7_A KAIC; homohexamer, hexa 83.3 0.39 1.3E-05 51.3 1.8 21 332-352 37-57 (525)
257 3qf4_A ABC transporter, ATP-bi 83.3 0.4 1.4E-05 52.2 2.0 21 332-352 367-387 (587)
258 3r20_A Cytidylate kinase; stru 83.3 0.34 1.2E-05 47.4 1.2 19 334-352 9-27 (233)
259 1fnn_A CDC6P, cell division co 83.3 0.41 1.4E-05 47.3 1.8 17 336-352 46-62 (389)
260 1nij_A Hypothetical protein YJ 83.1 0.4 1.4E-05 48.1 1.7 17 336-352 6-22 (318)
261 1r8s_A ADP-ribosylation factor 83.1 0.39 1.3E-05 41.2 1.4 17 336-352 2-18 (164)
262 3pqc_A Probable GTP-binding pr 83.1 0.4 1.4E-05 42.2 1.5 18 335-352 24-41 (195)
263 2erx_A GTP-binding protein DI- 83.1 0.39 1.3E-05 41.1 1.4 17 336-352 5-21 (172)
264 2qag_B Septin-6, protein NEDD5 82.8 0.43 1.5E-05 50.8 1.9 21 332-352 38-60 (427)
265 1r2q_A RAS-related protein RAB 82.8 0.41 1.4E-05 40.9 1.4 17 336-352 8-24 (170)
266 1wms_A RAB-9, RAB9, RAS-relate 82.8 0.4 1.4E-05 41.6 1.4 17 336-352 9-25 (177)
267 1sxj_E Activator 1 40 kDa subu 82.8 0.34 1.2E-05 47.8 1.0 16 337-352 39-54 (354)
268 1upt_A ARL1, ADP-ribosylation 82.7 0.42 1.4E-05 41.1 1.4 18 335-352 8-25 (171)
269 3m6a_A ATP-dependent protease 82.6 0.39 1.3E-05 52.0 1.4 20 333-352 107-126 (543)
270 2y8e_A RAB-protein 6, GH09086P 82.5 0.45 1.5E-05 41.2 1.6 17 336-352 16-32 (179)
271 2bjv_A PSP operon transcriptio 82.4 0.37 1.3E-05 45.9 1.1 19 334-352 29-47 (265)
272 3bc1_A RAS-related protein RAB 82.4 0.43 1.5E-05 41.7 1.4 17 336-352 13-29 (195)
273 3ozx_A RNAse L inhibitor; ATP 82.3 0.41 1.4E-05 52.1 1.5 21 332-352 292-312 (538)
274 1z0j_A RAB-22, RAS-related pro 82.2 0.44 1.5E-05 40.8 1.4 17 336-352 8-24 (170)
275 3pfi_A Holliday junction ATP-d 82.2 0.37 1.2E-05 47.5 1.0 18 335-352 56-73 (338)
276 3tw8_B RAS-related protein RAB 82.1 0.44 1.5E-05 41.3 1.4 17 336-352 11-27 (181)
277 2ocp_A DGK, deoxyguanosine kin 82.1 0.41 1.4E-05 45.3 1.2 19 334-352 2-20 (241)
278 2f6r_A COA synthase, bifunctio 82.1 0.41 1.4E-05 47.1 1.3 18 335-352 76-93 (281)
279 1q3t_A Cytidylate kinase; nucl 82.1 0.49 1.7E-05 44.7 1.8 21 332-352 14-34 (236)
280 3con_A GTPase NRAS; structural 82.0 0.45 1.5E-05 42.2 1.4 17 336-352 23-39 (190)
281 2cxx_A Probable GTP-binding pr 81.9 0.47 1.6E-05 41.7 1.5 17 336-352 3-19 (190)
282 3bk7_A ABC transporter ATP-bin 81.9 0.48 1.6E-05 52.3 1.9 21 332-352 115-135 (607)
283 4dsu_A GTPase KRAS, isoform 2B 81.9 0.46 1.6E-05 41.6 1.4 17 336-352 6-22 (189)
284 1moz_A ARL1, ADP-ribosylation 81.8 0.44 1.5E-05 41.7 1.3 19 334-352 18-36 (183)
285 3d8b_A Fidgetin-like protein 1 81.8 0.49 1.7E-05 47.9 1.8 21 332-352 115-135 (357)
286 2qby_B CDC6 homolog 3, cell di 81.8 0.53 1.8E-05 46.6 2.0 19 334-352 45-63 (384)
287 2a9k_A RAS-related protein RAL 81.7 0.47 1.6E-05 41.3 1.4 17 336-352 20-36 (187)
288 3umf_A Adenylate kinase; rossm 81.5 0.44 1.5E-05 46.0 1.3 21 332-352 27-47 (217)
289 1g8p_A Magnesium-chelatase 38 81.4 0.37 1.3E-05 47.2 0.7 16 337-352 48-63 (350)
290 2bov_A RAla, RAS-related prote 81.4 0.49 1.7E-05 42.3 1.4 17 336-352 16-32 (206)
291 2zts_A Putative uncharacterize 81.4 0.48 1.7E-05 43.8 1.4 21 332-352 28-48 (251)
292 3ihw_A Centg3; RAS, centaurin, 81.4 0.48 1.6E-05 42.6 1.4 17 336-352 22-38 (184)
293 3a8t_A Adenylate isopentenyltr 81.3 0.46 1.6E-05 49.3 1.4 20 333-352 39-58 (339)
294 1svi_A GTP-binding protein YSX 81.3 0.5 1.7E-05 41.9 1.5 19 334-352 23-41 (195)
295 2g6b_A RAS-related protein RAB 81.3 0.5 1.7E-05 41.1 1.4 17 336-352 12-28 (180)
296 2hxs_A RAB-26, RAS-related pro 81.2 0.5 1.7E-05 41.0 1.4 17 336-352 8-24 (178)
297 1mh1_A RAC1; GTP-binding, GTPa 81.2 0.51 1.7E-05 41.2 1.4 17 336-352 7-23 (186)
298 3t5g_A GTP-binding protein RHE 81.2 0.53 1.8E-05 41.2 1.6 17 336-352 8-24 (181)
299 1hqc_A RUVB; extended AAA-ATPa 81.1 0.38 1.3E-05 46.7 0.7 19 334-352 38-56 (324)
300 1z0f_A RAB14, member RAS oncog 81.1 0.51 1.7E-05 40.8 1.4 17 336-352 17-33 (179)
301 2fu5_C RAS-related protein RAB 81.1 0.56 1.9E-05 41.2 1.7 17 336-352 10-26 (183)
302 1fzq_A ADP-ribosylation factor 81.0 0.54 1.8E-05 42.0 1.6 18 335-352 17-34 (181)
303 1zu4_A FTSY; GTPase, signal re 80.9 0.44 1.5E-05 48.3 1.1 21 332-352 103-123 (320)
304 4edh_A DTMP kinase, thymidylat 80.9 0.46 1.6E-05 45.4 1.1 20 333-352 5-24 (213)
305 2efe_B Small GTP-binding prote 80.9 0.52 1.8E-05 41.1 1.4 17 336-352 14-30 (181)
306 4tmk_A Protein (thymidylate ki 80.9 0.53 1.8E-05 45.0 1.6 19 334-352 3-21 (213)
307 2c9o_A RUVB-like 1; hexameric 80.8 0.49 1.7E-05 49.6 1.4 19 334-352 63-81 (456)
308 3t1o_A Gliding protein MGLA; G 80.8 0.53 1.8E-05 41.4 1.4 17 336-352 16-32 (198)
309 2bme_A RAB4A, RAS-related prot 80.8 0.56 1.9E-05 41.2 1.6 17 336-352 12-28 (186)
310 3v9p_A DTMP kinase, thymidylat 80.6 0.52 1.8E-05 45.7 1.4 20 333-352 24-43 (227)
311 3j16_B RLI1P; ribosome recycli 80.6 0.56 1.9E-05 51.9 1.8 21 332-352 376-396 (608)
312 3kkq_A RAS-related protein M-R 80.6 0.54 1.9E-05 41.2 1.4 17 336-352 20-36 (183)
313 1um8_A ATP-dependent CLP prote 80.6 0.44 1.5E-05 48.1 1.0 20 333-352 71-90 (376)
314 2oil_A CATX-8, RAS-related pro 80.6 0.53 1.8E-05 41.9 1.4 17 336-352 27-43 (193)
315 3lv8_A DTMP kinase, thymidylat 80.4 0.56 1.9E-05 45.7 1.6 19 334-352 27-45 (236)
316 4bas_A ADP-ribosylation factor 80.4 0.55 1.9E-05 41.7 1.4 18 335-352 18-35 (199)
317 3bwd_D RAC-like GTP-binding pr 80.3 0.56 1.9E-05 40.9 1.4 18 335-352 9-26 (182)
318 4b4t_M 26S protease regulatory 80.2 0.5 1.7E-05 50.4 1.3 19 334-352 215-233 (434)
319 3pih_A Uvrabc system protein A 80.1 0.61 2.1E-05 54.1 2.0 22 332-353 22-43 (916)
320 1yqt_A RNAse L inhibitor; ATP- 80.0 0.57 1.9E-05 50.8 1.6 21 332-352 310-330 (538)
321 1p9r_A General secretion pathw 80.0 0.55 1.9E-05 49.6 1.5 20 333-352 166-185 (418)
322 3tmk_A Thymidylate kinase; pho 80.0 0.66 2.3E-05 44.7 1.9 20 333-352 4-23 (216)
323 1m8p_A Sulfate adenylyltransfe 80.0 0.55 1.9E-05 51.5 1.5 21 332-352 394-414 (573)
324 3cbq_A GTP-binding protein REM 79.9 0.58 2E-05 42.6 1.4 17 336-352 25-41 (195)
325 3clv_A RAB5 protein, putative; 79.9 0.59 2E-05 40.9 1.4 17 336-352 9-25 (208)
326 1f6b_A SAR1; gtpases, N-termin 79.9 0.55 1.9E-05 42.7 1.3 18 335-352 26-43 (198)
327 3lxx_A GTPase IMAP family memb 79.8 0.57 2E-05 44.0 1.4 17 336-352 31-47 (239)
328 3tkl_A RAS-related protein RAB 79.7 0.6 2.1E-05 41.3 1.4 17 336-352 18-34 (196)
329 2qp9_X Vacuolar protein sortin 79.7 0.5 1.7E-05 48.0 1.0 19 334-352 84-102 (355)
330 1z06_A RAS-related protein RAB 79.6 0.6 2.1E-05 41.5 1.4 17 336-352 22-38 (189)
331 1sxj_D Activator 1 41 kDa subu 79.6 0.51 1.7E-05 46.2 1.0 16 337-352 61-76 (353)
332 2h57_A ADP-ribosylation factor 79.6 0.63 2.2E-05 41.4 1.5 18 335-352 22-39 (190)
333 1m7b_A RND3/RHOE small GTP-bin 79.5 0.64 2.2E-05 41.2 1.6 17 336-352 9-25 (184)
334 3vfd_A Spastin; ATPase, microt 79.5 0.58 2E-05 47.7 1.4 20 333-352 147-166 (389)
335 1tf7_A KAIC; homohexamer, hexa 79.5 0.59 2E-05 50.0 1.6 21 332-352 279-299 (525)
336 3l0i_B RAS-related protein RAB 79.4 0.77 2.6E-05 41.4 2.1 17 336-352 35-51 (199)
337 2qm8_A GTPase/ATPase; G protei 79.4 0.6 2.1E-05 47.4 1.5 21 332-352 53-73 (337)
338 2grj_A Dephospho-COA kinase; T 79.3 0.57 2E-05 44.0 1.2 18 335-352 13-30 (192)
339 1sky_E F1-ATPase, F1-ATP synth 79.3 0.56 1.9E-05 50.7 1.3 19 334-352 151-169 (473)
340 3dz8_A RAS-related protein RAB 79.3 0.66 2.3E-05 41.4 1.6 17 336-352 25-41 (191)
341 2gf0_A GTP-binding protein DI- 79.2 0.66 2.3E-05 41.1 1.5 18 335-352 9-26 (199)
342 3sr0_A Adenylate kinase; phosp 79.2 0.58 2E-05 44.5 1.2 17 336-352 2-18 (206)
343 2r44_A Uncharacterized protein 79.2 0.37 1.3E-05 47.5 -0.2 19 334-352 46-64 (331)
344 3exa_A TRNA delta(2)-isopenten 79.2 0.54 1.9E-05 48.5 1.1 19 334-352 3-21 (322)
345 2qnr_A Septin-2, protein NEDD5 79.1 0.59 2E-05 46.6 1.3 17 336-352 20-36 (301)
346 3bk7_A ABC transporter ATP-bin 79.0 0.64 2.2E-05 51.3 1.6 21 332-352 380-400 (607)
347 1ksh_A ARF-like protein 2; sma 79.0 0.66 2.2E-05 40.9 1.4 19 334-352 18-36 (186)
348 2oap_1 GSPE-2, type II secreti 78.9 0.6 2E-05 50.5 1.4 21 332-352 258-278 (511)
349 3c5c_A RAS-like protein 12; GD 78.9 0.65 2.2E-05 41.6 1.4 17 336-352 23-39 (187)
350 3ld9_A DTMP kinase, thymidylat 78.8 0.63 2.2E-05 45.1 1.4 21 332-352 19-39 (223)
351 2hf9_A Probable hydrogenase ni 78.8 0.69 2.4E-05 42.5 1.6 18 335-352 39-56 (226)
352 2iwr_A Centaurin gamma 1; ANK 78.8 0.55 1.9E-05 41.0 0.9 17 336-352 9-25 (178)
353 2ygr_A Uvrabc system protein A 78.8 0.59 2E-05 54.7 1.4 22 332-353 44-65 (993)
354 4b4t_L 26S protease subunit RP 78.8 0.59 2E-05 49.8 1.3 19 334-352 215-233 (437)
355 2gf9_A RAS-related protein RAB 78.8 0.67 2.3E-05 41.2 1.4 17 336-352 24-40 (189)
356 3k1j_A LON protease, ATP-depen 78.8 0.54 1.9E-05 51.2 1.0 19 334-352 60-78 (604)
357 2r6f_A Excinuclease ABC subuni 78.7 0.61 2.1E-05 54.5 1.4 22 332-353 42-63 (972)
358 2zan_A Vacuolar protein sortin 78.7 0.62 2.1E-05 48.9 1.4 19 334-352 167-185 (444)
359 2fh5_B SR-beta, signal recogni 78.7 0.67 2.3E-05 42.1 1.4 18 335-352 8-25 (214)
360 3llu_A RAS-related GTP-binding 78.6 0.71 2.4E-05 41.6 1.6 18 335-352 21-38 (196)
361 1m2o_B GTP-binding protein SAR 78.5 0.72 2.5E-05 41.6 1.6 20 333-352 22-41 (190)
362 4b4t_K 26S protease regulatory 78.5 0.6 2.1E-05 49.6 1.2 45 303-352 179-224 (428)
363 3pvs_A Replication-associated 78.4 0.61 2.1E-05 49.4 1.2 18 335-352 51-68 (447)
364 4f4c_A Multidrug resistance pr 78.4 0.94 3.2E-05 54.2 2.9 21 332-352 1103-1123(1321)
365 1zj6_A ADP-ribosylation factor 78.4 0.73 2.5E-05 40.9 1.6 18 335-352 17-34 (187)
366 1vg8_A RAS-related protein RAB 78.3 0.7 2.4E-05 41.4 1.4 17 336-352 10-26 (207)
367 3oes_A GTPase rhebl1; small GT 78.2 0.74 2.5E-05 41.6 1.6 17 336-352 26-42 (201)
368 2axn_A 6-phosphofructo-2-kinas 78.2 0.93 3.2E-05 48.9 2.6 18 335-352 36-53 (520)
369 2zr9_A Protein RECA, recombina 78.2 0.72 2.5E-05 47.3 1.6 20 333-352 60-79 (349)
370 2h17_A ADP-ribosylation factor 78.2 0.67 2.3E-05 41.0 1.3 18 335-352 22-39 (181)
371 1zbd_A Rabphilin-3A; G protein 78.1 0.71 2.4E-05 41.4 1.4 17 336-352 10-26 (203)
372 3reg_A RHO-like small GTPase; 78.1 0.72 2.5E-05 41.2 1.4 17 336-352 25-41 (194)
373 2fg5_A RAB-22B, RAS-related pr 78.1 0.75 2.6E-05 41.2 1.5 17 336-352 25-41 (192)
374 3crm_A TRNA delta(2)-isopenten 78.0 0.64 2.2E-05 47.8 1.2 18 335-352 6-23 (323)
375 2bcg_Y Protein YP2, GTP-bindin 78.0 0.75 2.6E-05 41.4 1.6 17 336-352 10-26 (206)
376 2a5j_A RAS-related protein RAB 78.0 0.71 2.4E-05 41.2 1.4 17 336-352 23-39 (191)
377 2z43_A DNA repair and recombin 77.9 0.75 2.6E-05 46.0 1.6 21 332-352 105-125 (324)
378 2wsm_A Hydrogenase expression/ 77.9 0.75 2.6E-05 42.0 1.5 18 335-352 31-48 (221)
379 1x3s_A RAS-related protein RAB 77.8 0.74 2.5E-05 40.6 1.4 17 336-352 17-33 (195)
380 2il1_A RAB12; G-protein, GDP, 77.8 0.74 2.5E-05 41.3 1.4 17 336-352 28-44 (192)
381 2atv_A RERG, RAS-like estrogen 77.7 0.74 2.5E-05 41.3 1.4 18 335-352 29-46 (196)
382 3hr8_A Protein RECA; alpha and 77.7 0.67 2.3E-05 48.1 1.2 20 333-352 60-79 (356)
383 3d3q_A TRNA delta(2)-isopenten 77.4 0.68 2.3E-05 47.9 1.2 33 335-367 8-45 (340)
384 2yc2_C IFT27, small RAB-relate 77.4 0.58 2E-05 41.7 0.6 17 336-352 22-38 (208)
385 2o52_A RAS-related protein RAB 77.4 0.8 2.7E-05 41.5 1.6 17 336-352 27-43 (200)
386 2z4s_A Chromosomal replication 77.4 0.64 2.2E-05 48.8 1.0 19 334-352 130-148 (440)
387 2q3h_A RAS homolog gene family 77.4 0.77 2.6E-05 41.1 1.4 18 335-352 21-38 (201)
388 2ew1_A RAS-related protein RAB 77.2 0.82 2.8E-05 42.1 1.6 17 336-352 28-44 (201)
389 4gzl_A RAS-related C3 botulinu 77.2 0.82 2.8E-05 41.7 1.6 18 335-352 31-48 (204)
390 1v5w_A DMC1, meiotic recombina 77.1 0.71 2.4E-05 46.8 1.2 21 332-352 120-140 (343)
391 2fv8_A H6, RHO-related GTP-bin 77.1 0.82 2.8E-05 41.5 1.5 17 336-352 27-43 (207)
392 1tq4_A IIGP1, interferon-induc 77.1 0.83 2.9E-05 48.3 1.8 17 336-352 71-87 (413)
393 3cph_A RAS-related protein SEC 76.9 0.81 2.8E-05 41.1 1.4 18 335-352 21-38 (213)
394 1x6v_B Bifunctional 3'-phospho 76.9 0.78 2.7E-05 51.2 1.5 20 333-352 51-70 (630)
395 3euj_A Chromosome partition pr 76.8 0.79 2.7E-05 49.5 1.5 18 335-352 30-47 (483)
396 2p5s_A RAS and EF-hand domain 76.8 0.81 2.8E-05 41.2 1.4 18 335-352 29-46 (199)
397 1zd9_A ADP-ribosylation factor 76.8 0.83 2.8E-05 40.8 1.4 18 335-352 23-40 (188)
398 4djt_A GTP-binding nuclear pro 76.7 0.82 2.8E-05 41.6 1.4 17 336-352 13-29 (218)
399 2qu8_A Putative nucleolar GTP- 76.7 0.82 2.8E-05 42.4 1.4 18 335-352 30-47 (228)
400 1iqp_A RFCS; clamp loader, ext 76.5 0.7 2.4E-05 44.5 0.9 17 336-352 48-64 (327)
401 2chq_A Replication factor C sm 76.5 0.71 2.4E-05 44.2 1.0 16 337-352 41-56 (319)
402 3gj0_A GTP-binding nuclear pro 76.5 0.88 3E-05 41.7 1.5 17 336-352 17-33 (221)
403 2x77_A ADP-ribosylation factor 76.4 0.81 2.8E-05 40.6 1.3 19 334-352 22-40 (189)
404 3foz_A TRNA delta(2)-isopenten 76.4 0.79 2.7E-05 47.2 1.3 19 334-352 10-28 (316)
405 2f7s_A C25KG, RAS-related prot 76.3 0.84 2.9E-05 41.5 1.4 17 336-352 27-43 (217)
406 2atx_A Small GTP binding prote 76.3 0.9 3.1E-05 40.4 1.5 17 336-352 20-36 (194)
407 3llm_A ATP-dependent RNA helic 76.2 0.93 3.2E-05 42.7 1.7 19 332-350 74-92 (235)
408 3k53_A Ferrous iron transport 76.2 0.89 3E-05 43.9 1.6 17 336-352 5-21 (271)
409 2b6h_A ADP-ribosylation factor 76.2 0.91 3.1E-05 40.9 1.6 19 334-352 29-47 (192)
410 1ypw_A Transitional endoplasmi 76.1 0.74 2.5E-05 52.3 1.1 21 332-352 236-256 (806)
411 2i1q_A DNA repair and recombin 76.0 0.8 2.7E-05 45.3 1.2 21 332-352 96-116 (322)
412 2j0v_A RAC-like GTP-binding pr 76.0 0.93 3.2E-05 41.0 1.6 17 336-352 11-27 (212)
413 2j1l_A RHO-related GTP-binding 75.9 0.92 3.2E-05 41.6 1.5 17 336-352 36-52 (214)
414 4b4t_J 26S protease regulatory 75.8 0.74 2.5E-05 48.8 1.0 18 335-352 183-200 (405)
415 2xtp_A GTPase IMAP family memb 75.7 0.92 3.2E-05 43.0 1.5 18 335-352 23-40 (260)
416 3ice_A Transcription terminati 75.5 0.85 2.9E-05 48.8 1.3 20 333-352 173-192 (422)
417 1jr3_A DNA polymerase III subu 75.3 0.92 3.1E-05 44.7 1.4 18 335-352 39-56 (373)
418 4dhe_A Probable GTP-binding pr 75.3 0.58 2E-05 42.6 0.0 19 334-352 29-47 (223)
419 2gco_A H9, RHO-related GTP-bin 75.3 1 3.4E-05 40.8 1.6 17 336-352 27-43 (201)
420 2cjw_A GTP-binding protein GEM 75.1 0.97 3.3E-05 41.0 1.4 17 336-352 8-24 (192)
421 4aby_A DNA repair protein RECN 75.1 0.55 1.9E-05 47.8 -0.3 19 332-351 59-77 (415)
422 1gwn_A RHO-related GTP-binding 74.8 1 3.5E-05 41.4 1.6 17 336-352 30-46 (205)
423 1ojl_A Transcriptional regulat 74.7 0.87 3E-05 45.3 1.1 19 334-352 25-43 (304)
424 1ls1_A Signal recognition part 74.7 0.79 2.7E-05 45.7 0.8 20 333-352 97-116 (295)
425 3t5d_A Septin-7; GTP-binding p 74.6 1 3.5E-05 43.6 1.5 17 336-352 10-26 (274)
426 1sxj_B Activator 1 37 kDa subu 74.3 0.88 3E-05 43.7 1.0 16 337-352 45-60 (323)
427 1bif_A 6-phosphofructo-2-kinas 74.1 0.93 3.2E-05 47.7 1.2 19 334-352 39-57 (469)
428 2dhr_A FTSH; AAA+ protein, hex 74.1 0.88 3E-05 49.2 1.0 17 336-352 66-82 (499)
429 2ce7_A Cell division protein F 74.1 0.97 3.3E-05 48.6 1.3 18 335-352 50-67 (476)
430 2hup_A RAS-related protein RAB 74.1 1.1 3.8E-05 40.7 1.5 17 336-352 31-47 (201)
431 3kl4_A SRP54, signal recogniti 74.0 0.7 2.4E-05 49.2 0.2 20 333-352 96-115 (433)
432 4b4t_I 26S protease regulatory 73.9 0.97 3.3E-05 48.5 1.3 19 334-352 216-234 (437)
433 3eph_A TRNA isopentenyltransfe 73.7 0.95 3.2E-05 48.1 1.1 18 335-352 3-20 (409)
434 3hu3_A Transitional endoplasmi 73.6 1.1 3.9E-05 47.9 1.8 19 334-352 238-256 (489)
435 1w1w_A Structural maintenance 73.4 1.2 4E-05 46.2 1.7 19 333-351 25-43 (430)
436 4b4t_H 26S protease regulatory 73.2 0.87 3E-05 49.2 0.7 19 334-352 243-261 (467)
437 1sxj_A Activator 1 95 kDa subu 73.2 1.1 3.6E-05 47.9 1.4 19 334-352 77-95 (516)
438 4f4c_A Multidrug resistance pr 73.1 1.2 4.2E-05 53.2 2.0 21 332-352 442-462 (1321)
439 3q3j_B RHO-related GTP-binding 73.0 1.2 4E-05 41.2 1.4 17 336-352 29-45 (214)
440 3lxw_A GTPase IMAP family memb 72.9 1.1 3.9E-05 42.9 1.4 17 336-352 23-39 (247)
441 2qag_C Septin-7; cell cycle, c 72.8 1.1 3.8E-05 47.3 1.4 17 336-352 33-49 (418)
442 2iw3_A Elongation factor 3A; a 72.8 1.1 3.8E-05 52.4 1.5 21 332-352 459-479 (986)
443 3nbx_X ATPase RAVA; AAA+ ATPas 72.7 1.1 3.9E-05 48.3 1.5 19 334-352 41-59 (500)
444 3th5_A RAS-related C3 botulinu 75.0 0.74 2.5E-05 41.5 0.0 18 335-352 31-48 (204)
445 2vhj_A Ntpase P4, P4; non- hyd 72.6 1 3.5E-05 46.6 1.1 19 334-352 123-141 (331)
446 2qen_A Walker-type ATPase; unk 72.6 1.3 4.4E-05 42.8 1.7 18 335-352 32-49 (350)
447 1f2t_A RAD50 ABC-ATPase; DNA d 72.6 1.2 4.2E-05 39.8 1.4 16 335-350 24-39 (149)
448 3qf7_A RAD50; ABC-ATPase, ATPa 72.3 1.1 3.7E-05 45.9 1.2 19 332-351 22-40 (365)
449 3g5u_A MCG1178, multidrug resi 72.2 1.3 4.5E-05 52.8 1.9 21 332-352 414-434 (1284)
450 2orw_A Thymidine kinase; TMTK, 72.1 1.3 4.6E-05 40.9 1.6 19 334-352 3-21 (184)
451 3cpj_B GTP-binding protein YPT 71.6 1.3 4.4E-05 40.9 1.4 17 336-352 15-31 (223)
452 3bh0_A DNAB-like replicative h 71.5 1.4 4.8E-05 44.0 1.7 21 332-352 66-86 (315)
453 2h92_A Cytidylate kinase; ross 71.5 1.1 3.8E-05 41.2 0.9 18 335-352 4-21 (219)
454 3te6_A Regulatory protein SIR3 71.0 1.1 3.8E-05 45.7 0.9 21 332-352 43-63 (318)
455 2www_A Methylmalonic aciduria 70.9 1.4 4.7E-05 44.9 1.5 20 333-352 73-92 (349)
456 2vf7_A UVRA2, excinuclease ABC 70.8 1.4 4.8E-05 50.7 1.7 21 332-352 521-541 (842)
457 1j8m_F SRP54, signal recogniti 70.8 1.2 4.2E-05 44.5 1.1 19 334-352 98-116 (297)
458 3io5_A Recombination and repai 70.8 1.2 4.1E-05 46.3 1.0 19 333-352 28-46 (333)
459 3pxg_A Negative regulator of g 70.7 1.4 4.9E-05 46.4 1.7 18 335-352 202-219 (468)
460 3def_A T7I23.11 protein; chlor 70.6 1.4 4.9E-05 42.3 1.5 18 335-352 37-54 (262)
461 1e69_A Chromosome segregation 70.4 1.6 5.5E-05 43.5 1.9 16 336-351 26-41 (322)
462 1h65_A Chloroplast outer envel 70.3 1.5 5.1E-05 42.3 1.6 17 336-352 41-57 (270)
463 2gks_A Bifunctional SAT/APS ki 69.5 1.4 4.7E-05 48.1 1.2 21 332-352 370-390 (546)
464 2fna_A Conserved hypothetical 69.5 1.6 5.4E-05 42.2 1.6 18 335-352 31-48 (357)
465 3g5u_A MCG1178, multidrug resi 69.5 1.6 5.4E-05 52.1 1.9 21 332-352 1057-1077(1284)
466 2ffh_A Protein (FFH); SRP54, s 69.5 1.2 4.2E-05 47.2 0.8 20 333-352 97-116 (425)
467 1u94_A RECA protein, recombina 69.4 1.5 5.2E-05 45.1 1.5 20 333-352 62-81 (356)
468 2g3y_A GTP-binding protein GEM 69.2 1.6 5.3E-05 41.1 1.4 17 336-352 39-55 (211)
469 3iby_A Ferrous iron transport 69.1 1.7 5.8E-05 42.2 1.7 17 336-352 3-19 (256)
470 1tue_A Replication protein E1; 69.0 1.3 4.3E-05 43.4 0.7 19 334-352 58-76 (212)
471 2v3c_C SRP54, signal recogniti 68.1 1.4 4.7E-05 46.7 0.8 19 334-352 99-117 (432)
472 3i8s_A Ferrous iron transport 67.8 1.8 6.1E-05 42.2 1.5 17 336-352 5-21 (274)
473 3pih_A Uvrabc system protein A 67.8 1.7 5.9E-05 50.4 1.7 20 332-351 608-627 (916)
474 2r6a_A DNAB helicase, replicat 67.7 1.8 6.2E-05 45.3 1.7 21 332-352 201-221 (454)
475 2ga8_A Hypothetical 39.9 kDa p 67.6 1.6 5.4E-05 45.7 1.2 17 336-352 26-42 (359)
476 3b1v_A Ferrous iron uptake tra 67.5 1.7 5.9E-05 42.7 1.4 18 335-352 4-21 (272)
477 2iw3_A Elongation factor 3A; a 67.4 1.1 3.9E-05 52.3 0.0 21 332-352 697-717 (986)
478 1ni3_A YCHF GTPase, YCHF GTP-b 67.3 2.1 7.3E-05 44.9 2.1 21 332-352 18-38 (392)
479 3qks_A DNA double-strand break 67.3 1.8 6.2E-05 40.4 1.4 17 335-351 24-40 (203)
480 3dm5_A SRP54, signal recogniti 67.2 1.5 5E-05 47.0 0.8 19 334-352 100-118 (443)
481 1wb9_A DNA mismatch repair pro 67.2 1.9 6.6E-05 49.2 1.9 21 332-352 605-625 (800)
482 1g41_A Heat shock protein HSLU 66.8 1.6 5.3E-05 46.8 1.0 18 335-352 51-68 (444)
483 4dkx_A RAS-related protein RAB 66.3 1.8 6.1E-05 41.0 1.2 18 335-352 14-31 (216)
484 1w5s_A Origin recognition comp 65.8 1.3 4.6E-05 44.1 0.2 19 334-352 50-70 (412)
485 3cf2_A TER ATPase, transitiona 65.5 1.9 6.4E-05 49.5 1.3 19 334-352 238-256 (806)
486 2o5v_A DNA replication and rep 65.4 1.9 6.5E-05 44.6 1.3 19 332-351 25-43 (359)
487 3szr_A Interferon-induced GTP- 65.2 1.3 4.5E-05 48.6 -0.0 16 337-352 48-63 (608)
488 3a1s_A Iron(II) transport prot 65.1 2.1 7.1E-05 41.5 1.4 17 336-352 7-23 (258)
489 4ag6_A VIRB4 ATPase, type IV s 65.1 1.9 6.5E-05 43.8 1.2 19 334-352 35-53 (392)
490 2qag_A Septin-2, protein NEDD5 64.9 1.6 5.5E-05 44.6 0.6 17 336-352 39-55 (361)
491 2ygr_A Uvrabc system protein A 64.9 2.1 7.3E-05 50.1 1.7 21 332-352 666-686 (993)
492 3r7w_A Gtpase1, GTP-binding pr 64.8 1.9 6.5E-05 42.8 1.1 18 335-352 4-21 (307)
493 1ega_A Protein (GTP-binding pr 64.7 2.2 7.4E-05 42.4 1.5 17 336-352 10-26 (301)
494 3pxi_A Negative regulator of g 64.6 1.9 6.5E-05 48.0 1.2 17 336-352 523-539 (758)
495 1ewq_A DNA mismatch repair pro 64.6 2.2 7.4E-05 48.5 1.6 19 334-352 576-594 (765)
496 2xxa_A Signal recognition part 64.4 1.9 6.6E-05 45.6 1.1 19 334-352 100-118 (433)
497 2e87_A Hypothetical protein PH 64.1 2.6 8.7E-05 42.6 1.9 20 333-352 166-185 (357)
498 2p67_A LAO/AO transport system 63.9 2.4 8.3E-05 42.8 1.7 21 332-352 54-74 (341)
499 2b8t_A Thymidine kinase; deoxy 63.8 2.1 7.1E-05 41.5 1.1 21 332-352 10-30 (223)
500 1xp8_A RECA protein, recombina 63.8 2.4 8.2E-05 43.9 1.6 20 333-352 73-92 (366)
No 1
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=100.00 E-value=1.4e-111 Score=912.63 Aligned_cols=371 Identities=48% Similarity=0.784 Sum_probs=353.0
Q ss_pred ceeEecCCHHHHHHHHHhhcCCcEEecCCceEEecCCcccCCCCceeeecCCCccccccccC----cCccc---------
Q 008519 142 THVLYNLSPAELYEQAIKYEQGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK----MKNHD--------- 208 (563)
Q Consensus 142 ~~v~~Nls~~eLye~A~~~~~Gt~~t~~GaL~~~tG~~TGRSPkdk~IV~d~~~~~~i~wg~----~~e~~--------- 208 (563)
.+|+||++++||||+|+++++|++++++|+|+++||++|||||+|||||+++.++++|||++ ++++.
T Consensus 2 ~~v~~n~~~~eL~e~A~~~~eg~~lt~~Gal~~~tg~~tgRsp~dk~iv~~~~~~~~i~w~~~n~~~~~e~f~~l~~~~~ 81 (524)
T 1ii2_A 2 PTIHRNLLSPELVQWALKIEKDSRLTARGALAVMSYAKTGRSPLDKRIVDTDDVRENVDWGKVNMKLSEESFARVRKIAK 81 (524)
T ss_dssp CEEEESCCHHHHHHHHHHHCTTCEECTTSCEEECCTTCSSBCGGGEEEECCHHHHTTSCBTTTBCEECHHHHHHHHHHHH
T ss_pred CeeEeCCCHHHHHHHHHHhCCCcEEcCCCCEEEecCcccCCCcCceEEeCCCCCccccccCcCcccCCHHHHHHHHHHHH
Confidence 57999999999999999999998899999999999999999999999999999999999996 44432
Q ss_pred -----cc-eEEEEeeeeCCCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCCCCEEEEEcCCCCCCccccCCCccc
Q 008519 209 -----VQ-VFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSST 282 (563)
Q Consensus 209 -----k~-lyV~D~~vG~d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gkPD~tI~~ap~~~~~~~~~g~~s~t 282 (563)
++ |||+|+++|+||+|+++||+|++++||+||++|||+||.++|+++||+|||+||++|+|.++++.+|++|++
T Consensus 82 ~~l~~k~~l~v~d~~~G~d~~~~~~vrvit~~a~~~lf~~nl~~rp~~~e~~~fg~pd~~i~~~p~f~~~~~~~G~~s~~ 161 (524)
T 1ii2_A 82 EFLDTREHLFVVDCFAGHDERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTT 161 (524)
T ss_dssp HHHHTSSEEEEEEEEECSSTTTCEEEEEEESSHHHHHHHHHHSBCCCHHHHHTCCSCSEEEEEETTSCCCTTSTTCCSSC
T ss_pred HHHcCCCcEEEEeeeeecChhhcccEEEEECHHHHHHHHHHhhccCCHHHhcccCCCCEEEEeCCCccCCcccCCcCccc
Confidence 54 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEccccchhhHHHHHHHHHHhcccCceeeeccccccCCCCCEEEEEeCCCCCcccccccCCCceeecC
Q 008519 283 SIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDD 362 (563)
Q Consensus 283 ~i~iD~~~n~iiI~Gt~Y~GEmKK~iLTl~n~ll~~~G~LpmHgsanv~~~G~v~lfFGLSGTGKTTLsad~~r~lIgDD 362 (563)
+|++|+++++++|+||+|+|||||++||+||++++++|+||||||+|++++|++++||||||||||||+++++|.||+||
T Consensus 162 ~v~~~~~~~~~~I~Gt~Y~GemKK~~ftl~n~~~~~~g~L~~H~san~g~~g~~~~ffGlSGtGKTTLs~d~~r~lIgDD 241 (524)
T 1ii2_A 162 CVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDD 241 (524)
T ss_dssp EEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHHHHTTCEEESEEEEECTTCCEEEEECCTTSSHHHHHCCTTSEEEESS
T ss_pred EEEEECCCCeEEEECCcchHHHHHHHHHHHHHHHHHCCcEeecceeeeCCCCCEEEEEccCCcchhhhhhccCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCccccCCceeEEecCCCCCCChhhHhhhcccceEeeeEEcCCCCccccCCCCccccceEEEecccccCCCCCC
Q 008519 363 EHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPC 442 (563)
Q Consensus 363 e~~w~d~Gvfn~EgGcYaK~idL~~e~EP~I~~Ai~fgailENV~lD~~~r~vdf~d~s~TeNtRaiyPi~~i~N~~~~~ 442 (563)
+|+|+++|+||+|+|||+|||||++|.||+||+|++|++|+|||+||++++.|||+|+++|+|+|++||+++|+|+..++
T Consensus 242 e~~w~~~Gvfn~E~G~y~K~idl~~e~eP~I~~ai~~~~ilENV~~d~~g~~vd~~d~s~t~NtR~~~P~~~i~n~~~~~ 321 (524)
T 1ii2_A 242 EHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHIEGALSKA 321 (524)
T ss_dssp CEEECSSCEEESCSEEEEECTTCCTTTCHHHHHTCSTTCEEESCCBCTTTCSBCTTCCSSCSCCEEEEEGGGSTTCCSSC
T ss_pred hhhccCCCccccccceEEEecCCCcccChhHHHhcCcCceEEEEEECCCCCcccCCCCcccCCceEEEEHHHCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCccEEEEEEeccCCCCCCccccCHHHHHHHHHhcccccccccccc-cccchhhhhhhcccccccccccchh
Q 008519 443 VGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALLEQRMVL-RSQRQHFQLALVQHLSCCILPSMQQ 515 (563)
Q Consensus 443 ~~g~P~~IIfLt~DafgvlPPIskLt~eQA~y~FlsGytak~agTE~G-~~~p~~~~~~~~~~Fan~fgp~q~~ 515 (563)
+++||++||||+||+||+||||+|||++||||||++|||||+||||+| +++| |....+.|++||+|.+..
T Consensus 322 ~~g~P~~Iifl~~Da~gvlPPVskLt~eqa~y~F~sG~Tak~agtE~G~~~ep---~~~fs~~fg~PF~~~~~~ 392 (524)
T 1ii2_A 322 IAGHPKNVIFLTNDAFGVMPPVARLTSAQAMFWFVMGYTANVPGVEAGGTRTA---RPIFSSCFGGPFLVRHAT 392 (524)
T ss_dssp EECCEEEEEEEECCTTSCSCSEEEECHHHHHHHHHHCEEEECSSSBTTCCSSC---EEEECGGGCGGGCCSCHH
T ss_pred cCCCCceEEEEEcCCcCCCCCcEecCHHHHHHHHhcCccccccccccCccccC---ceeeccccCCCccCCCHH
Confidence 899999999999999999999999999999999999999999999999 9998 222334566777787654
No 2
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=100.00 E-value=3e-110 Score=902.03 Aligned_cols=377 Identities=44% Similarity=0.733 Sum_probs=355.1
Q ss_pred cccccccCccc-ceeEecCCHHHHHHHHHhhc-----CCcEEecCCceEEecCCcccCCCCceeeecCCCccccccccC-
Q 008519 131 TISVSDSSLKF-THVLYNLSPAELYEQAIKYE-----QGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK- 203 (563)
Q Consensus 131 ~~~l~~~gl~~-~~v~~Nls~~eLye~A~~~~-----~Gt~~t~~GaL~~~tG~~TGRSPkdk~IV~d~~~~~~i~wg~- 203 (563)
...|..+||.. .+|+||+++++|+|+|++++ +| .++++|+|+++||++|||||+|||||+++.+++.|||++
T Consensus 9 ~~~~~~~gi~~~~~v~~n~~~~~L~e~al~~~~~~~eeg-~l~~~Gal~~~tg~~tgRsp~dk~Iv~~~~~~~~i~w~~~ 87 (540)
T 2olr_A 9 PQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERG-VLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADK 87 (540)
T ss_dssp HHHHHHTTCCCCCCEEESCCHHHHHHHHHCTTCCGGGCE-EECTTSCEEECCCSCSSCCGGGEEEECSTTTTTTSCCTTS
T ss_pred ccchhhcCCCCCCeEEeCCCHHHHHHHHHhcCCCccccc-eecCCCCEEEcCCCcccCCCCceEEeCCCCCccccccccc
Confidence 44689999985 79999999999999999988 78 499999999999999999999999999999999999976
Q ss_pred ---------cCccc--------------cceEEEEeeeeCCCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCCCC
Q 008519 204 ---------MKNHD--------------VQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPD 260 (563)
Q Consensus 204 ---------~~e~~--------------k~lyV~D~~vG~d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gkPD 260 (563)
++++. ++|||+|+++|+|++|+++||+|++.+||+||++|||+||+.+|+++| +||
T Consensus 88 ~~~~~~N~~~~~e~f~~l~~~~~~~l~~k~lyv~d~~~G~d~~~~~~vr~ite~a~~alf~~nLf~rp~~ee~~~~-~pd 166 (540)
T 2olr_A 88 GKGKNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPD 166 (540)
T ss_dssp SSSCCSCEEECHHHHHHHHHHHHHHHTTSCEEEEEEEESSSTTTCEEEEEEESCHHHHHHHHHHSBCCCHHHHHTC-CCS
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHcCCCEEEEeeeeeCChhhceeEEEEeCHHHHHHHHHHhhcCCChHHhcCC-CCC
Confidence 44432 789999999999999999999999999999999999999999999999 999
Q ss_pred EEEEEc-----CCCCCCccccCCCcccEEEEecCCCeEEEEccccchhhHHHHHHHHHHhcccCceeeeccccccCCCCC
Q 008519 261 FTIYNA-----GQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGD 335 (563)
Q Consensus 261 ~tI~~a-----p~~~~~~~~~g~~s~t~i~iD~~~n~iiI~Gt~Y~GEmKK~iLTl~n~ll~~~G~LpmHgsanv~~~G~ 335 (563)
|+||++ |+|.++ |++++++|++|+++++++|+||+|+|||||++||+||++++++|+||||||+|++++|+
T Consensus 167 ~~i~~~~~~~~p~f~~~----G~~s~~~v~~~~~~~~~~I~Gt~Y~GemKK~~ftl~n~~l~~~G~L~mH~sanvg~~g~ 242 (540)
T 2olr_A 167 FIVMNGAKCTNPQWKEQ----GLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGD 242 (540)
T ss_dssp EEEEEETTCCCTTTTTT----TCSSSCEEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHTGGGTCEEECEEEEECTTSC
T ss_pred EEEEEeccCCCCCcccC----CccCccEEEEEccCCeEEEeCCcCchHhhhhHHHHhHHHHHHCCcEeecceeeeCCCCC
Confidence 999999 998876 88999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCcccccccCCCceeecCceeecCCCccccCCceeEEecCCCCCCChhhHhhhcccceEeeeEEcCCCCcc
Q 008519 336 VALFFGLSGTGKTTLSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREV 415 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idL~~e~EP~I~~Ai~fgailENV~lD~~~r~v 415 (563)
+++||||||||||||+++++|.||+||+|+|+++||||+|+|||+|||||++|.||+||+|++|++|+|||++|++++.
T Consensus 243 ~~lffGlSGtGKTTLs~d~~r~lIgDDe~~w~~~Gvfn~EgGcyak~i~Ls~e~EP~i~~ai~~~aileNV~~d~~g~~- 321 (540)
T 2olr_A 243 VAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTI- 321 (540)
T ss_dssp EEEEECSTTSSHHHHHCCTTSEEEESSCEEEETTEEEESCSEEEEECTTCCTTTSHHHHHTCSTTCEEESCEECTTSCE-
T ss_pred EEEEEccCCCCHHHHhcCcCCcEEecCceeecCCCcccccCceEEEeccCCcccChhHHHhcCccceeeeeeEcCCCCe-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred ccCCCCccccceEEEecccccCCCCC-CCCCCccEEEEEEeccCCCCCCccccCHHHHHHHHHhcccccccccccccccc
Q 008519 416 DYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALLEQRMVLRSQR 494 (563)
Q Consensus 416 df~d~s~TeNtRaiyPi~~i~N~~~~-~~~g~P~~IIfLt~DafgvlPPIskLt~eQA~y~FlsGytak~agTE~G~~~p 494 (563)
||+|+++|+|+|++||+++|+|+..+ ++++||++||||+||+||+||||+|||++||||||+||||||+||||+|+++|
T Consensus 322 df~d~s~t~NtR~~yPi~~i~n~~~~~~~~g~P~~IifLt~Da~gvlPPVskLt~eqA~y~FlsG~tak~aGtE~Gv~ep 401 (540)
T 2olr_A 322 DFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEP 401 (540)
T ss_dssp ETTCCSSCSCCEEEEEGGGSSSBCCSSSEESCEEEEEEEECCTTSCSCSEEECCHHHHHHHHHHCEEEEETTGGGTCCCE
T ss_pred ecCCCCccccceEEEEHHHCCCcCCccccCCCCCEEEEEecCCcCCCCCceeCCHHHHHHHHHhcchhhhhccccCcccc
Confidence 99999999999999999999999877 78899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccccccchhhh
Q 008519 495 QHFQLALVQHLSCCILPSMQQCW 517 (563)
Q Consensus 495 ~~~~~~~~~~Fan~fgp~q~~~~ 517 (563)
|-...++|+|||+|.+..=.
T Consensus 402 ---~~tfs~cFa~PF~p~~p~~y 421 (540)
T 2olr_A 402 ---TPTFSACFGAAFLSLHPTQY 421 (540)
T ss_dssp ---EEEECGGGCGGGCSSCHHHH
T ss_pred ---CCcccccccCcccCCCHHHH
Confidence 23334458888889886543
No 3
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Probab=100.00 E-value=3.6e-110 Score=902.45 Aligned_cols=394 Identities=42% Similarity=0.689 Sum_probs=364.3
Q ss_pred cccccccCccc-ceeEecCCHHHHHHHHHh---hc--CCcEEecCCceEEecCCcccCCCCceeeecCCCccccccc---
Q 008519 131 TISVSDSSLKF-THVLYNLSPAELYEQAIK---YE--QGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWW--- 201 (563)
Q Consensus 131 ~~~l~~~gl~~-~~v~~Nls~~eLye~A~~---~~--~Gt~~t~~GaL~~~tG~~TGRSPkdk~IV~d~~~~~~i~w--- 201 (563)
...|..+||.. .+|+||++++||||+|++ ++ +| .++++|+|+++||++|||||+|||||+++.+++ |||
T Consensus 4 ~~~~~~~g~~~~~~i~~n~~~~~L~e~a~~~~~~~~~eg-~l~~~Gal~~~tg~~tgRsp~dk~iv~~~~~~~-i~w~~~ 81 (532)
T 1ytm_A 4 SESLAKYGITGATNIVHNPSHEELFAAETQASLEGFEKG-TVTEMGAVNVMTGVYTGRSPKDKFIVKNEASKE-IWWTSD 81 (532)
T ss_dssp HHHHHHHTCCCCSEEEESCCHHHHHHHHTCTTCCGGGCE-EECTTSSEEECCTTCCSBCGGGEEEECSGGGTT-SCCCCS
T ss_pred ccchHhcCCCCCCeEEECCCHHHHHHHHHhhccCCcccc-eecCCCCEEEcCCCcccCCCCceEEeCCCCccc-cccccc
Confidence 45688999985 799999999999999998 77 88 599999999999999999999999999999999 999
Q ss_pred --cC----cCcc--------------ccceEEEEeeeeCCCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCCCCE
Q 008519 202 --GK----MKNH--------------DVQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDF 261 (563)
Q Consensus 202 --g~----~~e~--------------~k~lyV~D~~vG~d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gkPD~ 261 (563)
++ ++++ .++|||+|+++|+|++|+++||++++.+||+||++|||+||+.+|+++| +|||
T Consensus 82 ~~~~~n~~~~~e~f~~l~~~~~~~l~~k~l~v~d~~~G~d~~~~~~vr~it~~a~~~lf~~nLf~rp~~ee~~~f-~pd~ 160 (532)
T 1ytm_A 82 EFKNDNKPVTEEAWAQLKALAGKELSNKPLYVVDLFCGANENTRLKIRFVMEVAWQAHFVTNMFIRPTEEELKGF-EPDF 160 (532)
T ss_dssp SSCCSCEEECHHHHHHHHHHHHHHHSSSEEEEEEEEESSCTTTCEEEEEEESCHHHHHHHHHHSBCCCHHHHTTC-CCSE
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHcCCCEEEEEEEeeCChhhceeEEEEeCHHHHHHHHHHhccCCChHHhccC-CCCE
Confidence 54 3332 2789999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEcCC-CCCCccccCCCcccEEEEecCCCeEEEEccccchhhHHHHHHHHHHhcccCceeeeccccccCCCC-CEEEE
Q 008519 262 TIYNAGQ-FPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDG-DVALF 339 (563)
Q Consensus 262 tI~~ap~-~~~~~~~~g~~s~t~i~iD~~~n~iiI~Gt~Y~GEmKK~iLTl~n~ll~~~G~LpmHgsanv~~~G-~v~lf 339 (563)
+||++|+ |.++++.+|++|+++|++|+++++++|+||+|+|||||++||+||++++++|+||||||+|++++| ++++|
T Consensus 161 ~i~~~p~~f~~~~~~~G~~s~~~v~~n~~~~~~~I~gt~Y~GemKK~~ftl~n~~~~~~G~L~~H~sanv~~~g~~~~~f 240 (532)
T 1ytm_A 161 VVLNASKAKVENFKELGLNSETAVVFNLAEKMQIILNTWYGGEMKKGMFSMMNFYLPLQGIAAMHCSANTDLEGKNTAIF 240 (532)
T ss_dssp EEEEETTCCCTTTTTTTCSSSCEEEEETTTTEEEEESCCCTTHHHHHHHHHHHHHTGGGTCEEEEEEEEEETTSCSEEEE
T ss_pred EEEECCccccCCcccCCCCCceEEEEECCCCEEEEeCCccCchhhHhHHHHHHHHHHHCCcEeecCeeeeCCCCCeEEEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999888 99999
Q ss_pred EeCCCCCcccccccCCCceeecCceeecCCCccccCCceeEEecCCCCCCChhhHhhhcccceEeeeEEcCCCCccccCC
Q 008519 340 FGLSGTGKTTLSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSD 419 (563)
Q Consensus 340 FGLSGTGKTTLsad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idL~~e~EP~I~~Ai~fgailENV~lD~~~r~vdf~d 419 (563)
|||||||||||+++++|.||+||+|+|+++||||+|+|||+|||||+++.||+||+|++|++|+|||++|+++ .|||+|
T Consensus 241 fGlSGtGKTTLs~d~~r~lIgDDe~~w~~~Gvfn~EgGcyak~i~Ls~~~EP~i~~ai~~~ailENV~~d~~g-~vd~~d 319 (532)
T 1ytm_A 241 FGLSGTGKTTLSTDPKRLLIGDDEHGWDDDGVFNFEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANG-KVDFAD 319 (532)
T ss_dssp ECCTTSSHHHHHCCTTEEEEESSEEEECSSCEEESCSEEEEECTTCCTTTCHHHHHHCSTTCEEESCEECTTC-CEETTC
T ss_pred EecCCCCHHHHhhCcCCCEEECCeeeeccCCceeccceEEEEeccCCCccChhHHHhcCcCceeeeeEECCCC-ccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred CCccccceEEEecccccCCC-CCCCCCCccEEEEEEeccCCCCCCccccCHHHHHHHHHhcccccccccccccccchhhh
Q 008519 420 KSVTENTRAAYPIEYIPNAK-IPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALLEQRMVLRSQRQHFQ 498 (563)
Q Consensus 420 ~s~TeNtRaiyPi~~i~N~~-~~~~~g~P~~IIfLt~DafgvlPPIskLt~eQA~y~FlsGytak~agTE~G~~~p~~~~ 498 (563)
+++|+|+|++||+++|+|+. .+++++||++||||+||+|||||||+|||++||||||++|||||+||||+|++|| |
T Consensus 320 ~s~t~NtR~~~P~~~i~n~~~~~~~~g~P~~IifL~~DafgvlPPvsklt~~qa~y~FlsG~tak~aGtE~Gv~ep---~ 396 (532)
T 1ytm_A 320 KSVTENTRVSYPIFHIKNIVKPVSKAPAAKRVIFLSADAFGVLPPVSILSKEQTKYYFLSGFTAKLAGTERGITEP---T 396 (532)
T ss_dssp CSSCSCCEEEEEGGGSSSBCCSSSEESCEEEEEEEECCTTSCSCSEEECCHHHHHHHHHHCEEEECTTSBTTCCSC---E
T ss_pred CcccccceEEEEHHHCCCcccCCCcCCCCceEEEEecCCCCCCCCceecCHHHHHHHHHcCCcccccccccCcccc---C
Confidence 99999999999999999998 7888899999999999999999999999999999999999999999999999999 2
Q ss_pred hhhcccccccccccchhhhh---------ceeceeeccCCcc
Q 008519 499 LALVQHLSCCILPSMQQCWL---------RRCRSMVLQDGSS 531 (563)
Q Consensus 499 ~~~~~~Fan~fgp~q~~~~~---------~~~~~~~~~~~~~ 531 (563)
-...++|+|||+|.+..=.. +..+-..+|-|..
T Consensus 397 ~tfs~cF~~PF~~~~~~~ya~~L~~~i~~~~~~vylvNTg~~ 438 (532)
T 1ytm_A 397 PTFSSCFGAAFLTLPPTKYAEVLVKRMEASGAKAYLVNTGWN 438 (532)
T ss_dssp EEECGGGCGGGCCSCHHHHHHHHHHHHHHHTCEEEEEECSBC
T ss_pred CcccccccCCccCCCHHHHHHHHHHHHHhcCCeEEEEeCCcc
Confidence 22233488888888754332 2233445677766
No 4
>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, T thermophilus; 2.00A {Thermus thermophilus} SCOP: c.91.1.1 c.109.1.1 PDB: 1xkv_A* 2pc9_A*
Probab=100.00 E-value=3.7e-101 Score=831.72 Aligned_cols=377 Identities=42% Similarity=0.726 Sum_probs=341.6
Q ss_pred cccccCccc-ceeEecCCHHHHHHHHHhhcCCcEEecCCceEEecCCcccCCCCceeeecCCCccccccccC----cCcc
Q 008519 133 SVSDSSLKF-THVLYNLSPAELYEQAIKYEQGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK----MKNH 207 (563)
Q Consensus 133 ~l~~~gl~~-~~v~~Nls~~eLye~A~~~~~Gt~~t~~GaL~~~tG~~TGRSPkdk~IV~d~~~~~~i~wg~----~~e~ 207 (563)
.|..+||.. .+|+||++.+||||+|+++++|. ++++|+|++.||++|||||+|||||+++.++..+||++ +.++
T Consensus 3 ~~~~~~l~~~~~v~~n~~~~~l~e~a~~~g~g~-~~~~g~~~~~tg~~tgRsp~~~fIv~~~~~~~~~~w~~~n~~~~~e 81 (529)
T 1j3b_A 3 RLEALGIHPKKRVFWNTVSPVLVEHTLLRGEGL-LAHHGPLVVDTTPYTGRSPKDKFVVREPEVEGEIWWGEVNQPFAPE 81 (529)
T ss_dssp CCGGGTCCCSSCEEESCCHHHHHHHHHHTTSCE-ECTTSCEEECCTTCCSCCGGGEEEECCTTTTTTSCBTTTBEEECHH
T ss_pred chhhccCCCCCeEEECCChHHHHHHHHHcCCCE-ECCCCCEEeCCCCcccCCCCceEEeCCCCcCCccccccccCcCCHH
Confidence 478889974 79999999999999999999994 88999999999999999999999999999999999987 2332
Q ss_pred --------------ccceEEEEeeeeCCCCCeEEEEEEccccchhHHhhhcccCCC----hHhhccCCCCCEEEEEcCCC
Q 008519 208 --------------DVQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPT----PEELENFGTPDFTIYNAGQF 269 (563)
Q Consensus 208 --------------~k~lyV~D~~vG~d~~~rl~vRvit~~a~~alfl~NLf~rp~----~eEl~~~gkPD~tI~~ap~~ 269 (563)
.++|||+|.++|+|+++++++|+||+++||+||++|||+||. .+|+++| +|||+||++|+|
T Consensus 82 ~f~~l~~~~~~~m~gr~lyV~~~~~G~~~~~~~~~~~itd~a~~~lf~~~m~~rp~~~~~~~el~~~-~pd~~i~~~p~f 160 (529)
T 1j3b_A 82 AFEALYQRVVQYLSERDLYVQDLYAGADRRYRLAVRVVTESPWHALFARNMFILPRRFGNDDEVEAF-VPGFTVVHAPYF 160 (529)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEEEECSSTTTCEEEEEEESCHHHHHHHHHHSBCGGGGC------CC-CCSEEEEEETTC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEeeeCCcccCeeEEEEcChHHHHHHHHHHhcccCcccchhhhccC-CCCEEEEeCCCc
Confidence 178999999999999999999999999999999999999988 7899999 999999999999
Q ss_pred CCCccccCCCcccEEEEecCCCeEEEEccccchhhHHHHHHHHHHhcccCceeeeccccccCCCCCEEEEEeCCCCCccc
Q 008519 270 PCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTT 349 (563)
Q Consensus 270 ~~~~~~~g~~s~t~i~iD~~~n~iiI~Gt~Y~GEmKK~iLTl~n~ll~~~G~LpmHgsanv~~~G~v~lfFGLSGTGKTT 349 (563)
.++++.+|++++++|++|+++++++|+|++|+|||||++||+||++++++||||||||+|++++|++++|||||||||||
T Consensus 161 ~~~~~~~G~~s~~~i~~~~~~~~i~i~Gt~Y~Ge~KK~~l~i~~~~~~~~G~L~~H~sa~~~~~g~~~~ffGlSGtGKTt 240 (529)
T 1j3b_A 161 QAVPERDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTVMNYLMPKRGVFPMHASANVGKEGDVAVFFGLSGTGKTT 240 (529)
T ss_dssp CCCHHHHCCSSSCEEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHGGGGTCEEEECEEEECTTCCEEEEEECTTSCHHH
T ss_pred ccCcccCCCCCceEEEEECccCEEEEeCCccCcchHHHHHHHHHHHHHHCCeEeccceeeeCCCCcEEEEEccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceeecCceeecCCCccccCCceeEEecCCCCCCChhhHhhh-cccceEeeeEEcCCCCccccCCCCccccceE
Q 008519 350 LSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRA 428 (563)
Q Consensus 350 Lsad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idL~~e~EP~I~~Ai-~fgailENV~lD~~~r~vdf~d~s~TeNtRa 428 (563)
|+++++|.+|+||+|+|+++|+||+|+|||+|+++|+++.||+||+++ +|++|+|||++|++++.|||+|.++|+|+|+
T Consensus 241 Ls~~p~r~lIgDD~~~w~~~Gv~n~E~G~y~k~~~ls~~~eP~i~~ai~~~~~ileNV~~d~dg~~v~~~~~~~t~N~R~ 320 (529)
T 1j3b_A 241 LSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQFEAILENVVVNPESRRVQWDDDSKTENTRS 320 (529)
T ss_dssp HTCBTTBCEEESSEEEECSSCEEESCSEEEEECTTCCTTTCHHHHHHHSSTTCEEESCEECTTTCCEETTCCSSCSCCEE
T ss_pred HhhccCcceEECchhhhccCceecccCceEEEecCCCCcchHHHHHHhCcCCceeEEeEECCCCCcccCCCCCCCCCccE
Confidence 999999999999999999999999999999999999999999999999 9999999999999988999999999999999
Q ss_pred EEecccccCCCCCCCCCCccEEEEEEeccCCCCCCccccCHHHHHHHHHhcccccccccccccccchhhhhhhccccccc
Q 008519 429 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALLEQRMVLRSQRQHFQLALVQHLSCC 508 (563)
Q Consensus 429 iyPi~~i~N~~~~~~~g~P~~IIfLt~DafgvlPPIskLt~eQA~y~FlsGytak~agTE~G~~~p~~~~~~~~~~Fan~ 508 (563)
+||+++++|+..+++.++|++|||++||+||+||||++||++||+|||+||||||++|||+|+++| |-...++|.+|
T Consensus 321 ~~P~~~~pn~~~~~~~g~P~~Iifl~~da~gvlPpV~~l~~~qa~~~f~sG~Tak~agtE~Gv~ep---~ptFs~~f~~P 397 (529)
T 1j3b_A 321 SYPIAHLENVVESGVAGHPRAIFFLSADAYGVLPPIARLSPEEAMYYFLSGYTARVAGTERGVTEP---RATFSACFGAP 397 (529)
T ss_dssp EEEGGGCSSBCTTSEECCEEEEEEEECCTTSCSCSEEEECHHHHHHHHHHCEEEEC---------C---EEEECGGGCGG
T ss_pred EEEHHHCCCCCCCCcCCCCCEEEEEEccCCCCCCCeecCCHHHHHHHHHccccccccccccCcccc---CCcccccccCC
Confidence 999999999988788899999999999999999999999999999999999999999999999999 11122256677
Q ss_pred ccccch
Q 008519 509 ILPSMQ 514 (563)
Q Consensus 509 fgp~q~ 514 (563)
|.|.+.
T Consensus 398 F~~~~~ 403 (529)
T 1j3b_A 398 FLPMHP 403 (529)
T ss_dssp GCSSCH
T ss_pred ccCCCH
Confidence 777654
No 5
>2faf_A Phosphoenolpyruvate carboxykinase; pepck, phosphoryl transfer, lyase; HET: 20S EPE 1PE; 1.70A {Gallus gallus} PDB: 2fah_A* 2qzy_A*
Probab=99.91 E-value=7.4e-23 Score=221.42 Aligned_cols=332 Identities=18% Similarity=0.199 Sum_probs=238.3
Q ss_pred ccceeEecC-CHHH---HHHHHHhhcCCcEEecC----CceEEecC-CcccCCCCceeeecCCCccc--cc---------
Q 008519 140 KFTHVLYNL-SPAE---LYEQAIKYEQGSFIASS----GALATLSG-AKTGRSPRDKRVVKDETTEH--EL--------- 199 (563)
Q Consensus 140 ~~~~v~~Nl-s~~e---Lye~A~~~~~Gt~~t~~----GaL~~~tG-~~TGRSPkdk~IV~d~~~~~--~i--------- 199 (563)
.+..||+.. |.+| |.+++++. |+ +... +...+.|. .=++|.-...||+-+...+. ..
T Consensus 24 ~Pd~I~icdGS~eE~~~l~~~~v~~--G~-~~~L~k~~n~~l~~sdp~DvARve~rTfI~t~~~~dagp~n~~~g~~~~~ 100 (608)
T 2faf_A 24 RPREVLLCDGSEEEGKELLRGLQDD--GV-LHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQL 100 (608)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHHT--TS-EEECTTSBSCEEECCCTTCSSCCGGGEEEECSSGGGTSCCCCTTCCCCCS
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHhC--CC-eeecCCCCCceeccCChhhcceeccceEEecCchhhcCCCCccccccccc
Confidence 478888855 5554 55566544 54 2221 33334443 44666666778887544332 11
Q ss_pred -cccC---cCcc----------ccceEEEEeeeeC-CCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCCCCEE-E
Q 008519 200 -WWGK---MKNH----------DVQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFT-I 263 (563)
Q Consensus 200 -~wg~---~~e~----------~k~lyV~D~~vG~-d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gkPD~t-I 263 (563)
.|-. |..+ -|.|||.-=.+|- ...+....-.||+++|..+.|+-|. |-..+.++..+. +|+ .
T Consensus 101 ~nw~~p~e~~~~l~~~f~G~M~GRTMYViPFsMGP~gsp~s~~GVeiTDS~YVv~smriMt-R~g~~v~~~lg~-~Fv~~ 178 (608)
T 2faf_A 101 GNWMSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMT-RVGPAVLQRLDD-DFVRC 178 (608)
T ss_dssp CCEECHHHHHHHHHHHSTTTTTTSEEEEEEEEESCTTCTTCEEEEEEESCHHHHHHHHHHS-EESHHHHTTCCS-CCEEE
T ss_pred cccCCHHHHHHHHHHhCCcccCCCEEEEEeeecCCCCCCcccceeEeeCCHHHHHHHHHHH-hcCHHHHHHhhC-cccee
Confidence 2533 2211 2899999766666 7888889999999999999887655 656666766666 775 3
Q ss_pred EEcCCCCCC-c------cccCCCcccEEEEecCCCeEEEEccccchh---hHHH-HHHHHHHhcccCceeeecccc-cc-
Q 008519 264 YNAGQFPCN-R------YTHYMTSSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLHSGC-NM- 330 (563)
Q Consensus 264 ~~ap~~~~~-~------~~~g~~s~t~i~iD~~~n~iiI~Gt~Y~GE---mKK~-iLTl~n~ll~~~G~LpmHgsa-nv- 330 (563)
+|+-+-+.+ + ++- ...++.|+.+++++.|+..|+.|.|+ -||. .|+++.+++.++|||..|+-. .|
T Consensus 179 vHSvG~pl~~~~~~~~~WPc-n~~~~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAs~~ar~EGWLAEHMlIlgvt 257 (608)
T 2faf_A 179 LHSVGRPLPLTEPLVSSWPC-DPSRVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEHMLILGVT 257 (608)
T ss_dssp EEECSCCSSCSSCCSTTCCC-CGGGCEEEEEGGGTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEESCEEEEEE
T ss_pred ecccCCcCCcccccCCCCcc-CCCccEEEEECCCCeEEEecCCcCcchhhhhHHHHHHHHHHHhhhcChHHHHHHHheec
Confidence 444332210 0 110 01248999999999999999999999 5554 589999999999999999962 22
Q ss_pred CCCCCEEEEE--eCCCCCcccccc-cC---CC--ceeecCcee--ecCCCcc---ccCCceeEEecCCCCCCChhhHhhh
Q 008519 331 GKDGDVALFF--GLSGTGKTTLST-DH---NR--YLIGDDEHC--WGDNGVS---NIEGGCYAKCIDLSREKEPDIWNAI 397 (563)
Q Consensus 331 ~~~G~v~lfF--GLSGTGKTTLsa-d~---~r--~lIgDDe~~--w~d~Gvf---n~EgGcYaK~idL~~e~EP~I~~Ai 397 (563)
+.+|++..|. ++||||||+|++ .| +- ..||||+.- ++.+|.. |.|.|+|.++.+.+.++.|.+++++
T Consensus 258 ~p~g~~~yiaaAfPSacGKTnlAMl~p~~~gwkve~vGDDIawm~~~~dG~l~AiNPE~GfFGvapGt~~~tnP~am~tl 337 (608)
T 2faf_A 258 SPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAMATI 337 (608)
T ss_dssp CTTSCEEEEEEECSSCTTSCCGGGCCCSSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTCCTTTCHHHHHHT
T ss_pred CCCCcEEEEEEecccccchhhHhhcCCCCCCceeEEeecceeeeEECCCCcEEEecCCCCeeEecCCCCCCcCHHHHHHh
Confidence 3678764444 599999999998 22 32 379999864 4479953 7899999999999999999999999
Q ss_pred cccceEeeeEEcCCCCccccCCCCc-------------------------cccceEEEecccccCCC--CCCCCCCccEE
Q 008519 398 KFGAVLENVVFDEHTREVDYSDKSV-------------------------TENTRAAYPIEYIPNAK--IPCVGPHPKNV 450 (563)
Q Consensus 398 ~fgailENV~lD~~~r~vdf~d~s~-------------------------TeNtRaiyPi~~i~N~~--~~~~~g~P~~I 450 (563)
...+|++||.+++| +.|.|.+... +.|+|++.|+...|++. .+...|.|++.
T Consensus 338 ~~n~IFTNVa~t~d-G~v~WeG~~~~~~p~~~~~dw~G~~w~~~~g~paaHpNsRft~p~~qcp~id~~we~p~GVpIsa 416 (608)
T 2faf_A 338 ARNTIFTNVGLRSD-GGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDA 416 (608)
T ss_dssp SBSCEEESCEEETT-SCEECTTCCCCCCTTCCEECTTSSEECTTCSSCSSCTTCEEEEEGGGCTTBCTTTTCTTCEEEEE
T ss_pred ccCceeeeeEEcCC-CceecCCCCCCCCCCccccccCCCccCCCCCCcCcCCccceEeEHhhCCccCccccCCCCceEEE
Confidence 88999999999987 4787775543 38999999999999985 44666889877
Q ss_pred EEEEeccCCCCCCcccc-CHHHHHHHHHhccc
Q 008519 451 ILLACDAFGVLPPVSKL-NLAQTMYHFISGYT 481 (563)
Q Consensus 451 IfLt~DafgvlPPIskL-t~eQA~y~FlsGyt 481 (563)
|++.-.+...+|+|.+. +++.+++ .|.+
T Consensus 417 iiFggRR~~~vPlV~ea~~W~hGV~---~Gas 445 (608)
T 2faf_A 417 IIFGGRRPRGVPLVVEAFGWRHGVF---MGSA 445 (608)
T ss_dssp EEEEECCSSSSCSEEECSSHHHHHH---HHHT
T ss_pred EEEcccCCCCCCcEEEccCchhhhh---hhch
Confidence 77763346788999988 5777766 5664
No 6
>2zci_A Phosphoenolpyruvate carboxykinase [GTP], phosphoenolpyruvate; GTP-dependent, signaling protein, lyase; 2.30A {Corynebacterium glutamicum}
Probab=99.91 E-value=4.9e-23 Score=223.18 Aligned_cols=334 Identities=16% Similarity=0.204 Sum_probs=240.1
Q ss_pred ccceeEecC-CHHH---HHHHHHhhcCCcEEecC------CceEEecC-CcccCCCCceeeecCCCccc--cccccC---
Q 008519 140 KFTHVLYNL-SPAE---LYEQAIKYEQGSFIASS------GALATLSG-AKTGRSPRDKRVVKDETTEH--ELWWGK--- 203 (563)
Q Consensus 140 ~~~~v~~Nl-s~~e---Lye~A~~~~~Gt~~t~~------GaL~~~tG-~~TGRSPkdk~IV~d~~~~~--~i~wg~--- 203 (563)
.+..||+.. |.+| |.+++++. |+ +... +...+.|. .=++|.-..+||+-+...+. ...|-.
T Consensus 32 ~Pd~I~icdGS~eE~~~l~~~~v~~--G~-~~~L~~~k~~n~~l~~sdp~DvARve~rTfI~t~~~~dagptnnw~~p~e 108 (610)
T 2zci_A 32 QPEAVVFVDGSQAEWDRMAEDLVEA--GT-LIKLNEEKRPNSYLARSNPSDVARVESRTFICSEKEEDAGPTNNWAPPQA 108 (610)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHHT--TS-EEECCTTTSTTCEEECCCGGGSSCCGGGEEECCSSTTTTCTTSCCCCHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHhC--CC-eeecCCCCCCceeecCCChhhcceeccceEEecCchhhcCCCcCccCHHH
Confidence 478998865 5554 55566644 54 2222 44555555 44677777788887544332 223533
Q ss_pred cCcc----------ccceEEEEeeeeC-CCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCC-CCEE-EEEcCCCC
Q 008519 204 MKNH----------DVQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGT-PDFT-IYNAGQFP 270 (563)
Q Consensus 204 ~~e~----------~k~lyV~D~~vG~-d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gk-PD~t-I~~ap~~~ 270 (563)
|..+ -|.|||.-=.+|- ...+....-.||+++|..+.|+-|. |-..+.++..+. .+|+ .+|+-+-+
T Consensus 109 ~~~~l~~~f~G~M~GRTMYViPfsMGP~gsp~s~~GVeiTDS~YVv~smrIMt-R~g~~v~~~lg~~~~Fv~~vHSvG~p 187 (610)
T 2zci_A 109 MKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIMT-RMGIEALDKIGANGSFVRCLHSVGAP 187 (610)
T ss_dssp HHHHHHHHHTTTTTTSEEEEEEEEESCTTCSSCEEEEEEESCHHHHHHHHHHS-EESHHHHHHHTTTCCCEEEEEECSCC
T ss_pred HHHHHHHhCCcccCCCEEEEEeeecCCCCCCcccceeEeeCCHHHHHHHHHHH-hcCHHHHHHhCCCCCeeeeecccCCc
Confidence 2221 2899999766666 7888888999999999999887665 544444443333 5665 34444322
Q ss_pred CCcc-cc---CCCcccEEEEecCCCeEEEEccccchh---hHHH-HHHHHHHhcccCceeeecccc-cc-CCCCCEEEEE
Q 008519 271 CNRY-TH---YMTSSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLHSGC-NM-GKDGDVALFF 340 (563)
Q Consensus 271 ~~~~-~~---g~~s~t~i~iD~~~n~iiI~Gt~Y~GE---mKK~-iLTl~n~ll~~~G~LpmHgsa-nv-~~~G~v~lfF 340 (563)
..+. .+ ..+.++.|+.+++++.|+..|+.|.|+ -||. .|+++.+++.++|||..|+-. .| +.+|++..|.
T Consensus 188 l~~~~~dv~wPc~~~~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAs~~ar~EGWLAEHMlIlgvt~P~g~~~yva 267 (610)
T 2zci_A 188 LEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVMAREEGWMAEHMLILKLINPEGKAYHIA 267 (610)
T ss_dssp CCSSCCCCSSCCCSSCEEEEETTTTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEECCEEEEEECSSSCEEEEE
T ss_pred CCCCCcCCCCCCCCceEEEEecCcCeEEEecCCcCcchhhhhHHHHHHHHHHHhhhcChHHHHHHHheecCCCCcEEEEE
Confidence 1111 00 122468999999999999999999999 5554 589999999999999999962 22 3678764444
Q ss_pred --eCCCCCcccccc-cC---CC--ceeecCcee--ecCCCcc--ccCCceeEEecCCCCCCChhhHhhh-cccceEeeeE
Q 008519 341 --GLSGTGKTTLST-DH---NR--YLIGDDEHC--WGDNGVS--NIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVV 407 (563)
Q Consensus 341 --GLSGTGKTTLsa-d~---~r--~lIgDDe~~--w~d~Gvf--n~EgGcYaK~idL~~e~EP~I~~Ai-~fgailENV~ 407 (563)
++||||||+|++ .| +- .+||||+.- ++.+|.+ |.|.|+|.++.+.+.++.|.+++++ ...+|++||.
T Consensus 268 aAfPSacGKTnlAMl~p~~~gwkve~vGDDIawm~~~~dGl~AiNPE~GfFGvapGt~~~tnP~am~~~~~~n~IFtNVa 347 (610)
T 2zci_A 268 AAFPSACGKTNLAMITPTIPGWTAQVVGDDIAWLKLREDGLYAVNPENGFFGVAPGTNYASNPIAMKTMEPGNTLFTNVA 347 (610)
T ss_dssp EECSSSHHHHHHHTCCCSSTTCEEEEEESSCEEEEECSSSEEEECCCSEEEEECTTCCTTTCHHHHHHHTTCCCEEESCE
T ss_pred EecccccchhhHhhcCCCCCCceeEEeecceeeEeeCCCceeEecCCCceeEecCCCCCCcCHHHHHHhccCCceEeeeE
Confidence 599999999998 22 32 379999864 4478865 7799999999999999999999999 8889999999
Q ss_pred EcCCCCccccCCCCc-----------------------cccceEEEecccccCCC--CCCCCCCccEEEEEEeccCCCCC
Q 008519 408 FDEHTREVDYSDKSV-----------------------TENTRAAYPIEYIPNAK--IPCVGPHPKNVILLACDAFGVLP 462 (563)
Q Consensus 408 lD~~~r~vdf~d~s~-----------------------TeNtRaiyPi~~i~N~~--~~~~~g~P~~IIfLt~DafgvlP 462 (563)
+++| +.|.|.+... +.|+|++.|+...|++. .+...|.|++.|++.-.+...+|
T Consensus 348 ~t~d-G~v~WeG~~~~~p~~~~dw~G~~w~~~~~~paaHpNsRft~p~~qcp~i~~~we~p~GVpIsaiiFggRR~~~vP 426 (610)
T 2zci_A 348 LTDD-GDIWWEGMDGDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAAAPEFNDWEGVKIDAILFGGRRADTVP 426 (610)
T ss_dssp EETT-SCEECTTCSSCCCSCEECTTSCEECTTCSSCSSCTTCEEEEEGGGCTTBCGGGGCTTCEECSEEEEECCCSSSSC
T ss_pred EcCC-CcccCCCCCCCCCCcccccCCCccCCCCCCcCcCCccceEeEHhhCCccCccccCCCCceEEEEEEcccCCCCCC
Confidence 9987 5787776553 39999999999999985 44666889877777733467889
Q ss_pred Ccccc-CHHHHHHHHHhccc
Q 008519 463 PVSKL-NLAQTMYHFISGYT 481 (563)
Q Consensus 463 PIskL-t~eQA~y~FlsGyt 481 (563)
+|.+. +++.+++ .|.+
T Consensus 427 lV~ea~~W~hGV~---~Gas 443 (610)
T 2zci_A 427 LVTQTYDWEHGTM---VGAL 443 (610)
T ss_dssp SEEECSSHHHHHH---HHHT
T ss_pred cEEEccCchhhhh---hhch
Confidence 99988 5777666 5664
No 7
>3moe_A Phosphoenolpyruvate carboxykinase, cytosolic [GTP; gluconeogenesis, lyase; HET: GTP SPV 1PE; 1.25A {Rattus norvegicus} PDB: 3mof_A* 3moh_A* 3dtb_A* 2qey_A* 2qf1_A* 2qew_A* 2rk7_A 2rk8_A 2rka_A* 2rkd_A 2rke_A 2qf2_A* 3dt2_A* 3dt7_A* 3dt4_A* 1khb_A* 1khe_A* 1khf_A* 1khg_A 1m51_A* ...
Probab=99.86 E-value=5.6e-20 Score=199.32 Aligned_cols=332 Identities=17% Similarity=0.172 Sum_probs=235.3
Q ss_pred ccceeEecC-CH---HHHHHHHHhhcCCcEEec-CCceEEecC-CcccCCCCceeeecCCCccc----------cccccC
Q 008519 140 KFTHVLYNL-SP---AELYEQAIKYEQGSFIAS-SGALATLSG-AKTGRSPRDKRVVKDETTEH----------ELWWGK 203 (563)
Q Consensus 140 ~~~~v~~Nl-s~---~eLye~A~~~~~Gt~~t~-~GaL~~~tG-~~TGRSPkdk~IV~d~~~~~----------~i~wg~ 203 (563)
.+..||+.. |. +.|.+++++.++-..+.. -+..++.|. .=+.|.-..+||+-+...+. ...|-.
T Consensus 41 ~Pd~I~icdGS~eE~~~l~~~~ve~G~~~~L~k~pn~~l~~sdP~DvARve~rTfI~t~~~~da~p~~~~g~~~~nnwm~ 120 (624)
T 3moe_A 41 QPEYIHICDGSEEEYGRLLAHMQEEGVIRKLKKYDNCWLALTDPRDVARIESKTVIITQEQRDTVPIPKSGQSQLGRWMS 120 (624)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHHTTSCEECTTSBSCEEECCCTTCCSCCGGGEEEECSSHHHHSCCCSSSCCSSCCEEC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHcCCcccccCCCCCEEEeCChhhccccccceEEecCchhhcCCcccCCcCcccccCC
Confidence 478999865 45 346666665433322211 133334333 23555555568886544331 234533
Q ss_pred ---cCcc----------ccceEEEEeeeeC-CCCCeEEEEEEccccchhHHhhhcccCCChHhhccCCCCCEE-EEEcCC
Q 008519 204 ---MKNH----------DVQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFT-IYNAGQ 268 (563)
Q Consensus 204 ---~~e~----------~k~lyV~D~~vG~-d~~~rl~vRvit~~a~~alfl~NLf~rp~~eEl~~~gkPD~t-I~~ap~ 268 (563)
|..+ -|.+||.-=.+|- .+.+..-.-.+|+++|..+.|+-|. |-..+.++..+..+|+ .+|+-+
T Consensus 121 p~e~~~~l~~~f~G~M~GRTMYViPFsMGP~GSp~s~~GVeiTDS~YVv~smrIMt-R~g~~vld~lg~~~Fv~clHSvG 199 (624)
T 3moe_A 121 EEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMT-RMGTSVLEALGDGEFIKCLHSVG 199 (624)
T ss_dssp HHHHHHHHHTTSTTTTTTSEEEEEEEEESCSSCTTCEEEEEEESCHHHHHHHHHHS-EESHHHHHHHTTCCCEEEEEECS
T ss_pred HHHHHHHHHhhCcccccCCeEEEEeeecCCCCCCccceeEEccCcHHHHHhHHHHh-hCCHHHHHhhcCCCeeeeecccC
Confidence 2111 2899999766666 7778888889999999999888665 5445555443445775 344433
Q ss_pred CCCCcc-cc----CCC-cccEEEEecCCCeEEEEccccchh---hHHH-HHHHHHHhcccCceeeecccc-cc-CCCCCE
Q 008519 269 FPCNRY-TH----YMT-SSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLHSGC-NM-GKDGDV 336 (563)
Q Consensus 269 ~~~~~~-~~----g~~-s~t~i~iD~~~n~iiI~Gt~Y~GE---mKK~-iLTl~n~ll~~~G~LpmHgsa-nv-~~~G~v 336 (563)
-+.+.. .+ ..+ .++.|+.++++++|+..|+.|.|+ -||. .|+++.+++.++|||..|+-. .| +++|++
T Consensus 200 ~pl~~~~~~v~~Wpcnp~k~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAS~~Ar~EGWLAEHMlIlgit~P~G~~ 279 (624)
T 3moe_A 200 CPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITNPEGKK 279 (624)
T ss_dssp CCSSCSSCCBTTBCCCGGGCEEEEEGGGTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEESCEEEEEECTTSCE
T ss_pred CCCCCCCccCCCCCCCCCceEEEEecccCeEEEecCCcCcchhhhHHHHHHHHHHHHhhhcccHHHhHHHheecCCCCcE
Confidence 221110 00 011 247899999999999999999999 6877 999999999999999999962 23 478888
Q ss_pred EEEEe--CCCCCccccccc-C---CC--ceeecCcee--ecCCCcc---ccCCceeEEecCCCCCCChhhHhhhcccceE
Q 008519 337 ALFFG--LSGTGKTTLSTD-H---NR--YLIGDDEHC--WGDNGVS---NIEGGCYAKCIDLSREKEPDIWNAIKFGAVL 403 (563)
Q Consensus 337 ~lfFG--LSGTGKTTLsad-~---~r--~lIgDDe~~--w~d~Gvf---n~EgGcYaK~idL~~e~EP~I~~Ai~fgail 403 (563)
..|.| +|+||||.|++. | +- ..||||+.- |+.+|.. |.|.|+|....+.+.+..|.++++++..+|+
T Consensus 280 ~yiaaAFPSaCGKTnlAMl~p~~~Gwkve~vGDDIAwm~~~~dG~l~AiNPE~GfFGvapGt~~~tnp~am~~l~~n~IF 359 (624)
T 3moe_A 280 KYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIF 359 (624)
T ss_dssp EEEEEECCTTSSHHHHHTCCCSSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTCSTTTCHHHHHHTTBSCEE
T ss_pred EEEEEEcccccccccHhhcCCCCCCceeEEecccEEEEEECCCccEEeecCCCCeeeecCCCCCccCHHHHHhhcCCceE
Confidence 66655 999999999883 3 32 379999753 3679964 9999999999999999999999999889999
Q ss_pred eeeEEcCCCCcc----------------ccCCC---------CccccceEEEecccccCCC--CCCCCCCccEEEEEE-e
Q 008519 404 ENVVFDEHTREV----------------DYSDK---------SVTENTRAAYPIEYIPNAK--IPCVGPHPKNVILLA-C 455 (563)
Q Consensus 404 ENV~lD~~~r~v----------------df~d~---------s~TeNtRaiyPi~~i~N~~--~~~~~g~P~~IIfLt-~ 455 (563)
.||.+++|+ .| ||... ..+.|+|.+.|+...|++. -+...|.|++.|++. +
T Consensus 360 TNVa~t~dG-~v~WeG~~~~~p~~~~~~dw~G~~w~~~~~~p~aHPNsRft~p~~qcp~~~p~we~p~GVpIsaiiFGGR 438 (624)
T 3moe_A 360 TNVAETSDG-GVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGR 438 (624)
T ss_dssp ESCEEETTS-CEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTTTTCTTCEEEEEEEEECC
T ss_pred eeeEECCCC-CeecCCCCCCCCCCcceeeCCCCCCCCCCCCcCCCCcccccccHhhCCCCCccccCCCCceEEEEEEccc
Confidence 999998873 32 22221 2569999999999999985 346679999988888 5
Q ss_pred ccCCCCCCcccc-CHHHHHH
Q 008519 456 DAFGVLPPVSKL-NLAQTMY 474 (563)
Q Consensus 456 DafgvlPPIskL-t~eQA~y 474 (563)
| ...+|+|..- +++...+
T Consensus 439 r-~~~vPlV~ea~~W~hGV~ 457 (624)
T 3moe_A 439 R-PAGVPLVYEALSWQHGVF 457 (624)
T ss_dssp C-SSSCCSEEECSSHHHHHH
T ss_pred C-CCCCCcEEEecCcchhhh
Confidence 5 5678999865 8999987
No 8
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=97.70 E-value=1.1e-05 Score=77.27 Aligned_cols=49 Identities=27% Similarity=0.268 Sum_probs=40.4
Q ss_pred eeeeccccccCCCCCEEEEEeCCCCCcccccc---cCCCceeecCceeec-CCC
Q 008519 321 ILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG-DNG 370 (563)
Q Consensus 321 ~LpmHgsanv~~~G~v~lfFGLSGTGKTTLsa---d~~r~lIgDDe~~w~-d~G 370 (563)
.+.+||++ +..+|..++|.|.||+|||||+. ..+..||+||..... .+|
T Consensus 4 ~~~lHas~-v~v~G~gvli~G~SGaGKStlal~L~~rG~~lvaDD~v~i~~~~~ 56 (181)
T 3tqf_A 4 KQTWHANF-LVIDKMGVLITGEANIGKSELSLALIDRGHQLVCDDVIDLKQENN 56 (181)
T ss_dssp CEEEESEE-EEETTEEEEEEESSSSSHHHHHHHHHHTTCEEEESSEEEEEESSS
T ss_pred cEEEEEEE-EEECCEEEEEEcCCCCCHHHHHHHHHHcCCeEecCCEEEEEEeCC
Confidence 47899998 88889999999999999999776 456789999986644 443
No 9
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=97.55 E-value=3.8e-05 Score=78.88 Aligned_cols=49 Identities=27% Similarity=0.247 Sum_probs=40.2
Q ss_pred cCceeeeccccccCCCCCEEEEEeCCCCCcccccc---cCCCceeecCceeec
Q 008519 318 KRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (563)
Q Consensus 318 ~~G~LpmHgsanv~~~G~v~lfFGLSGTGKTTLsa---d~~r~lIgDDe~~w~ 367 (563)
-..++++||++ +..+|..++|.|.||+|||||+. ..+..||+||.....
T Consensus 129 ~~~~~~~H~~~-v~~~g~~vl~~G~sG~GKSt~a~~l~~~g~~lv~dD~~~i~ 180 (314)
T 1ko7_A 129 LARTTSLHGVL-VDVYGVGVLITGDSGIGKSETALELIKRGHRLVADDNVEIR 180 (314)
T ss_dssp TCEEEEEESEE-EEETTEEEEEEESTTSSHHHHHHHHHHTTCEEEESSEEEEE
T ss_pred hccceeeeEEE-EEECCEEEEEEeCCCCCHHHHHHHHHhcCCceecCCeEEEE
Confidence 34579999987 66689999999999999999775 456789999986544
No 10
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=97.54 E-value=3e-05 Score=79.59 Aligned_cols=47 Identities=26% Similarity=0.328 Sum_probs=39.7
Q ss_pred ceeeeccccccCCCCCEEEEEeCCCCCcccccc---cCCCceeecCceeec
Q 008519 320 QILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (563)
Q Consensus 320 G~LpmHgsanv~~~G~v~lfFGLSGTGKTTLsa---d~~r~lIgDDe~~w~ 367 (563)
..+++||++ +..+|..++|.|.||+|||||+. ..+..||+||.....
T Consensus 134 ~~~~~H~~~-v~~~g~gvli~G~sG~GKStlal~l~~~G~~lv~DD~v~i~ 183 (312)
T 1knx_A 134 TVAQIHGVL-LEVFGVGVLLTGRSGIGKSECALDLINKNHLFVGDDAIEIY 183 (312)
T ss_dssp CCEEEEEEE-EEETTEEEEEEESSSSSHHHHHHHHHTTTCEEEEEEEEEEE
T ss_pred hcceeEEEE-EEECCEEEEEEcCCCCCHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 359999987 77789999999999999999776 456789999987655
No 11
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=97.25 E-value=8.9e-05 Score=72.23 Aligned_cols=49 Identities=27% Similarity=0.194 Sum_probs=38.8
Q ss_pred cCceeeeccccccCCCCCEEEEEeCCCCCcccccc---cCCCceeecCceeec
Q 008519 318 KRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (563)
Q Consensus 318 ~~G~LpmHgsanv~~~G~v~lfFGLSGTGKTTLsa---d~~r~lIgDDe~~w~ 367 (563)
..+.+++||++ +..+|+.++|.|+||+|||||+. .....+|+||...+-
T Consensus 19 ~a~~~~lHa~~-v~~~g~~ilI~GpsGsGKStLA~~La~~g~~iIsdDs~~v~ 70 (205)
T 2qmh_A 19 LAERRSMHGVL-VDIYGLGVLITGDSGVGKSETALELVQRGHRLIADDRVDVY 70 (205)
T ss_dssp --CCCCEESEE-EEETTEEEEEECCCTTTTHHHHHHHHTTTCEEEESSEEEEE
T ss_pred cCcceeeeEEE-EEECCEEEEEECCCCCCHHHHHHHHHHhCCeEEecchhhee
Confidence 56788999998 66788899999999999999876 234479999986554
No 12
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=94.58 E-value=0.011 Score=53.80 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=17.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|+||+|||||..
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~ 25 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVR 25 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHH
T ss_pred CCcEEEEECcCCCCHHHHHH
Confidence 57899999999999999765
No 13
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=94.46 E-value=0.0091 Score=54.27 Aligned_cols=21 Identities=29% Similarity=0.583 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 7 ~~gei~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 7 PELSLVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp ESSEEEEEECCTTSCHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 468899999999999999876
No 14
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=94.43 E-value=0.011 Score=53.24 Aligned_cols=21 Identities=33% Similarity=0.678 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 7 ~~g~~i~l~G~~GsGKSTl~~ 27 (191)
T 1zp6_A 7 LGGNILLLSGHPGSGKSTIAE 27 (191)
T ss_dssp CTTEEEEEEECTTSCHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 467889999999999999765
No 15
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=94.39 E-value=0.013 Score=53.51 Aligned_cols=20 Identities=15% Similarity=0.419 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|+.++|.|+||+|||||..
T Consensus 4 ~g~~i~i~GpsGsGKSTL~~ 23 (180)
T 1kgd_A 4 MRKTLVLLGAHGVGRRHIKN 23 (180)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 47889999999999999765
No 16
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=94.18 E-value=0.016 Score=53.96 Aligned_cols=21 Identities=33% Similarity=0.460 Sum_probs=18.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.++|.|+||+|||||..
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~ 38 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVR 38 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 458899999999999999765
No 17
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=94.18 E-value=0.014 Score=52.01 Aligned_cols=19 Identities=21% Similarity=0.323 Sum_probs=16.8
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..+++.|+||+||||++.
T Consensus 3 ~~~i~l~G~~GsGKST~a~ 21 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVR 21 (178)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4679999999999999775
No 18
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=94.13 E-value=0.014 Score=53.88 Aligned_cols=21 Identities=48% Similarity=0.707 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|+||||||||..
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~ 43 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLAC 43 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 568899999999999999765
No 19
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=93.94 E-value=0.018 Score=52.28 Aligned_cols=20 Identities=35% Similarity=0.519 Sum_probs=17.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|+||+|||||+.
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~ 24 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRK 24 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 57889999999999999765
No 20
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=93.86 E-value=0.019 Score=53.68 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~ 26 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVRE 26 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECcCCCCHHHHHH
Confidence 468899999999999999765
No 21
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=93.80 E-value=0.016 Score=52.98 Aligned_cols=19 Identities=42% Similarity=0.508 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|++++|.|+||+|||||..
T Consensus 1 ~~ii~l~GpsGaGKsTl~~ 19 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLK 19 (186)
T ss_dssp CCCEEEESSSSSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 4678999999999999754
No 22
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=93.79 E-value=0.017 Score=54.71 Aligned_cols=21 Identities=33% Similarity=0.340 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.++|.|+||+|||||..
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~ 41 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIK 41 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999765
No 23
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=93.72 E-value=0.016 Score=53.98 Aligned_cols=20 Identities=35% Similarity=0.451 Sum_probs=16.3
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|+.++|.|+||+|||||..
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~ 22 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLK 22 (198)
T ss_dssp --CCEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 24
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=93.71 E-value=0.021 Score=54.81 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk 34 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQ 34 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 568899999999999999765
No 25
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=93.69 E-value=0.019 Score=53.44 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~ 40 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSN 40 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457889999999999999775
No 26
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=93.67 E-value=0.016 Score=51.36 Aligned_cols=19 Identities=26% Similarity=0.468 Sum_probs=16.8
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..+++.|+||||||||+.
T Consensus 4 ~~~i~l~G~~GsGKSTl~~ 22 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGR 22 (173)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4679999999999999775
No 27
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=93.33 E-value=0.024 Score=53.36 Aligned_cols=21 Identities=33% Similarity=0.452 Sum_probs=14.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||||||||..
T Consensus 25 ~~G~ii~l~Gp~GsGKSTl~~ 45 (231)
T 3lnc_A 25 SVGVILVLSSPSGCGKTTVAN 45 (231)
T ss_dssp ECCCEEEEECSCC----CHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 468899999999999999764
No 28
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=93.30 E-value=0.026 Score=52.10 Aligned_cols=21 Identities=33% Similarity=0.601 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||||||||+.
T Consensus 27 ~~g~~i~l~G~~GsGKSTl~~ 47 (200)
T 4eun_A 27 EPTRHVVVMGVSGSGKTTIAH 47 (200)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 347889999999999999765
No 29
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=93.22 E-value=0.021 Score=52.85 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|+||+|||||..
T Consensus 11 ~~~~i~l~G~sGsGKsTl~~ 30 (204)
T 2qor_A 11 RIPPLVVCGPSGVGKGTLIK 30 (204)
T ss_dssp CCCCEEEECCTTSCHHHHHH
T ss_pred cCCEEEEECCCCCCHHHHHH
Confidence 47789999999999999765
No 30
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=93.22 E-value=0.025 Score=50.53 Aligned_cols=20 Identities=30% Similarity=0.750 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..+++.|+||+|||||+.
T Consensus 7 ~g~~i~l~G~~GsGKSTl~~ 26 (175)
T 1knq_A 7 DHHIYVLMGVSGSGKSAVAS 26 (175)
T ss_dssp TSEEEEEECSTTSCHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 46789999999999999765
No 31
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=93.16 E-value=0.023 Score=51.26 Aligned_cols=20 Identities=40% Similarity=0.662 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|+.++|+|++|||||||..
T Consensus 37 ~g~~~~l~G~~G~GKTtL~~ 56 (180)
T 3ec2_A 37 EGKGLTFVGSPGVGKTHLAV 56 (180)
T ss_dssp GCCEEEECCSSSSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 37789999999999999864
No 32
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=93.08 E-value=0.027 Score=51.77 Aligned_cols=21 Identities=33% Similarity=0.260 Sum_probs=17.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||+.
T Consensus 4 ~~~~~i~i~G~~GsGKSTl~~ 24 (211)
T 3asz_A 4 PKPFVIGIAGGTASGKTTLAQ 24 (211)
T ss_dssp -CCEEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHH
Confidence 356789999999999999875
No 33
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=92.93 E-value=0.034 Score=53.73 Aligned_cols=21 Identities=38% Similarity=0.722 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 29 ~~Ge~~~iiG~nGsGKSTLl~ 49 (235)
T 3tif_A 29 KEGEFVSIMGPSGSGKSTMLN 49 (235)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 679999999999999999764
No 34
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=92.86 E-value=0.024 Score=51.43 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|+||+|||||..
T Consensus 2 g~ii~l~G~~GaGKSTl~~ 20 (189)
T 2bdt_A 2 KKLYIITGPAGVGKSTTCK 20 (189)
T ss_dssp EEEEEEECSTTSSHHHHHH
T ss_pred CeEEEEECCCCCcHHHHHH
Confidence 4578999999999999765
No 35
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=92.78 E-value=0.034 Score=51.23 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=18.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..++.++|.|+|||||||++.
T Consensus 23 ~~~~~i~l~G~~GsGKsTl~~ 43 (199)
T 3vaa_A 23 NAMVRIFLTGYMGAGKTTLGK 43 (199)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHH
Confidence 457899999999999999775
No 36
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=92.77 E-value=0.034 Score=53.27 Aligned_cols=21 Identities=43% Similarity=0.676 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 28 ~~Ge~~~iiG~nGsGKSTLl~ 48 (224)
T 2pcj_A 28 KKGEFVSIIGASGSGKSTLLY 48 (224)
T ss_dssp ETTCEEEEEECTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999764
No 37
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=92.76 E-value=0.034 Score=50.89 Aligned_cols=21 Identities=33% Similarity=0.427 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+++++.|++|+|||||..
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr 51 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTR 51 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999765
No 38
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=92.72 E-value=0.034 Score=51.75 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|++|+|||||..
T Consensus 28 ~~G~~~~l~GpnGsGKSTLl~ 48 (251)
T 2ehv_A 28 PEGTTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 468899999999999999764
No 39
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=92.70 E-value=0.034 Score=48.77 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|+||+||||++.
T Consensus 3 ~i~l~G~~GsGKsT~~~ 19 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAA 19 (173)
T ss_dssp EEEEECSSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999775
No 40
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=92.59 E-value=0.036 Score=49.42 Aligned_cols=19 Identities=37% Similarity=0.550 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++|+||||++.
T Consensus 3 ~~~I~i~G~~GsGKsT~~~ 21 (192)
T 1kht_A 3 NKVVVVTGVPGVGSTTSSQ 21 (192)
T ss_dssp CCEEEEECCTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4679999999999999765
No 41
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=92.46 E-value=0.036 Score=50.96 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 23 ~~G~~~~l~G~nGsGKSTll~ 43 (231)
T 4a74_A 23 ETQAITEVFGEFGSGKTQLAH 43 (231)
T ss_dssp ESSEEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457889999999999999764
No 42
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=92.46 E-value=0.04 Score=49.45 Aligned_cols=19 Identities=42% Similarity=0.508 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+||||++.
T Consensus 5 ~~~I~l~G~~GsGKST~~~ 23 (193)
T 2rhm_A 5 PALIIVTGHPATGKTTLSQ 23 (193)
T ss_dssp CEEEEEEESTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999765
No 43
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=92.45 E-value=0.036 Score=48.08 Aligned_cols=17 Identities=35% Similarity=0.739 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 3 ~I~l~G~~GsGKsT~a~ 19 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAK 19 (179)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 68999999999999765
No 44
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=92.43 E-value=0.04 Score=49.51 Aligned_cols=19 Identities=32% Similarity=0.518 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++||||||++.
T Consensus 5 ~~~i~l~G~~GsGKst~a~ 23 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGS 23 (185)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 5679999999999999776
No 45
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=92.41 E-value=0.044 Score=53.91 Aligned_cols=21 Identities=43% Similarity=0.707 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 30 ~~Ge~~~liG~nGsGKSTLlk 50 (262)
T 1b0u_A 30 RAGDVISIIGSSGSGKSTFLR 50 (262)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 46
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=92.32 E-value=0.046 Score=52.30 Aligned_cols=21 Identities=19% Similarity=0.521 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
-.|+.++|.|+||+|||||..
T Consensus 17 ~~g~~ivl~GPSGaGKsTL~~ 37 (197)
T 3ney_A 17 QGRKTLVLIGASGVGRSHIKN 37 (197)
T ss_dssp CSCCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECcCCCCHHHHHH
Confidence 358899999999999999765
No 47
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=92.14 E-value=0.041 Score=49.48 Aligned_cols=21 Identities=48% Similarity=0.621 Sum_probs=17.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|++|+||||++.
T Consensus 3 ~~g~~i~l~G~~GsGKST~~~ 23 (179)
T 2pez_A 3 MRGCTVWLTGLSGAGKTTVSM 23 (179)
T ss_dssp -CCEEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 357789999999999999765
No 48
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=92.10 E-value=0.051 Score=52.58 Aligned_cols=21 Identities=29% Similarity=0.566 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 29 ~~Ge~~~i~G~nGsGKSTLl~ 49 (237)
T 2cbz_A 29 PEGALVAVVGQVGCGKSSLLS 49 (237)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 49
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=91.89 E-value=0.057 Score=48.55 Aligned_cols=20 Identities=30% Similarity=0.584 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|+|++|+|||||..
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~ 54 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQ 54 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 47789999999999999765
No 50
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=91.88 E-value=0.046 Score=48.29 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 4 ~I~i~G~~GsGKST~a~ 20 (181)
T 1ly1_A 4 IILTIGCPGSGKSTWAR 20 (181)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEecCCCCCHHHHHH
Confidence 58999999999999875
No 51
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=91.86 E-value=0.054 Score=49.87 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=25.6
Q ss_pred CCCCEEEEEeCCCCCccccccc---C--CCceeecCceeecC
Q 008519 332 KDGDVALFFGLSGTGKTTLSTD---H--NRYLIGDDEHCWGD 368 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsad---~--~r~lIgDDe~~w~d 368 (563)
+.+..+++.|.||+|||||+.. . +-.+|..|...|..
T Consensus 19 ~~~~~i~i~G~~GsGKSTl~~~L~~~~~~~~~i~~D~~~~~~ 60 (207)
T 2qt1_A 19 SKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPE 60 (207)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHTTSTTEEEEEGGGGBCCG
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHhcCCcEEEeCCccccCH
Confidence 4577899999999999997762 1 22356655555543
No 52
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=91.85 E-value=0.046 Score=49.12 Aligned_cols=20 Identities=40% Similarity=0.390 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|+||+||||++.
T Consensus 10 ~~~~i~i~G~~GsGKst~~~ 29 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGK 29 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHH
T ss_pred cCCeEEEEeCCCCCHHHHHH
Confidence 35679999999999999775
No 53
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=91.81 E-value=0.051 Score=53.13 Aligned_cols=21 Identities=48% Similarity=0.831 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 31 ~~Ge~~~liG~nGsGKSTLlk 51 (257)
T 1g6h_A 31 NKGDVTLIIGPNGSGKSTLIN 51 (257)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred eCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999765
No 54
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=91.79 E-value=0.059 Score=51.36 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 20 ~~Ge~~~liG~nGsGKSTLl~ 40 (208)
T 3b85_A 20 DTNTIVFGLGPAGSGKTYLAM 40 (208)
T ss_dssp HHCSEEEEECCTTSSTTHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 458899999999999999764
No 55
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=91.76 E-value=0.057 Score=53.38 Aligned_cols=21 Identities=38% Similarity=0.781 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 48 ~~Gei~~liG~NGsGKSTLlk 68 (263)
T 2olj_A 48 REGEVVVVIGPSGSGKSTFLR 68 (263)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCcHHHHHH
Confidence 678999999999999999765
No 56
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=91.70 E-value=0.053 Score=52.86 Aligned_cols=21 Identities=48% Similarity=0.743 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 33 ~~Ge~~~i~G~nGsGKSTLl~ 53 (247)
T 2ff7_A 33 KQGEVIGIVGRSGSGKSTLTK 53 (247)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 57
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=91.70 E-value=0.053 Score=52.11 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 32 ~~Ge~~~i~G~nGsGKSTLl~ 52 (229)
T 2pze_A 32 ERGQLLAVAGSTGAGKTSLLM 52 (229)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999764
No 58
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=91.67 E-value=0.054 Score=52.74 Aligned_cols=21 Identities=38% Similarity=0.713 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 27 ~~Ge~~~l~G~nGsGKSTLlk 47 (250)
T 2d2e_A 27 PKGEVHALMGPNGAGKSTLGK 47 (250)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999765
No 59
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=91.66 E-value=0.054 Score=52.42 Aligned_cols=21 Identities=33% Similarity=0.602 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 30 ~~Ge~~~l~G~nGsGKSTLl~ 50 (240)
T 1ji0_A 30 PRGQIVTLIGANGAGKTTTLS 50 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999765
No 60
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=91.63 E-value=0.048 Score=48.55 Aligned_cols=17 Identities=29% Similarity=0.683 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 3 ~I~i~G~~GsGKsT~~~ 19 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLA 19 (194)
T ss_dssp EEEEEECTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999775
No 61
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=91.61 E-value=0.063 Score=49.19 Aligned_cols=21 Identities=29% Similarity=0.377 Sum_probs=17.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+..++|.|++|+||||++.
T Consensus 18 ~~~~~I~l~G~~GsGKST~a~ 38 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQAV 38 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 345679999999999999765
No 62
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=91.58 E-value=0.055 Score=53.49 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 35 ~~Ge~~~liG~nGsGKSTLl~ 55 (266)
T 4g1u_C 35 ASGEMVAIIGPNGAGKSTLLR 55 (266)
T ss_dssp ETTCEEEEECCTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 578999999999999999765
No 63
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=91.57 E-value=0.056 Score=52.34 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 26 ~~Ge~~~i~G~nGsGKSTLl~ 46 (243)
T 1mv5_A 26 QPNSIIAFAGPSGGGKSTIFS 46 (243)
T ss_dssp CTTEEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678899999999999999765
No 64
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=91.55 E-value=0.063 Score=49.01 Aligned_cols=20 Identities=40% Similarity=0.632 Sum_probs=17.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|.+||||||++.
T Consensus 9 ~~~~I~l~G~~GsGKST~~~ 28 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSK 28 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHH
T ss_pred cCCEEEEEcCCCCCHHHHHH
Confidence 46789999999999999776
No 65
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=91.52 E-value=0.064 Score=53.07 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 43 ~~Ge~~~i~G~nGsGKSTLlk 63 (271)
T 2ixe_A 43 YPGKVTALVGPNGSGKSTVAA 63 (271)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 66
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=91.50 E-value=0.057 Score=53.82 Aligned_cols=21 Identities=43% Similarity=0.678 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 32 ~~Ge~~~iiGpnGsGKSTLl~ 52 (275)
T 3gfo_A 32 KRGEVTAILGGNGVGKSTLFQ 52 (275)
T ss_dssp ETTSEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 67
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=91.49 E-value=0.057 Score=49.97 Aligned_cols=19 Identities=42% Similarity=0.469 Sum_probs=16.8
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+.+++|.|+|||||||++.
T Consensus 5 ~~~i~i~G~~GsGKSTl~~ 23 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCK 23 (227)
T ss_dssp SCEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999876
No 68
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=91.48 E-value=0.066 Score=55.75 Aligned_cols=21 Identities=43% Similarity=0.718 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++++|+||||||||..
T Consensus 28 ~~Ge~~~llGpsGsGKSTLLr 48 (359)
T 3fvq_A 28 DPGEILFIIGASGCGKTTLLR 48 (359)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCchHHHHHH
Confidence 678999999999999999664
No 69
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=91.48 E-value=0.046 Score=50.16 Aligned_cols=19 Identities=26% Similarity=0.594 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|+||+|||||+.
T Consensus 18 ~~~I~l~G~~GsGKSTla~ 36 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGE 36 (202)
T ss_dssp SSCEEEECSTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999875
No 70
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=91.42 E-value=0.066 Score=52.68 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 39 ~~Gei~~l~G~NGsGKSTLlk 59 (256)
T 1vpl_A 39 EEGEIFGLIGPNGAGKTTTLR 59 (256)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 71
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=91.40 E-value=0.067 Score=52.53 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 44 ~~Ge~~~i~G~nGsGKSTLl~ 64 (260)
T 2ghi_A 44 PSGTTCALVGHTGSGKSTIAK 64 (260)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 72
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=91.40 E-value=0.067 Score=52.62 Aligned_cols=21 Identities=38% Similarity=0.672 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 31 ~~Ge~~~liG~nGsGKSTLl~ 51 (266)
T 2yz2_A 31 NEGECLLVAGNTGSGKSTLLQ 51 (266)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999765
No 73
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=91.31 E-value=0.069 Score=52.65 Aligned_cols=21 Identities=43% Similarity=0.748 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 44 ~~Ge~~~l~G~NGsGKSTLlk 64 (267)
T 2zu0_C 44 HPGEVHAIMGPNGSGKSTLSA 64 (267)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 74
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=91.12 E-value=0.077 Score=48.40 Aligned_cols=20 Identities=30% Similarity=0.494 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|.+||||||++.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~ 27 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSR 27 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 46789999999999999775
No 75
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=91.11 E-value=0.055 Score=51.96 Aligned_cols=21 Identities=48% Similarity=0.729 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 33 ~~Ge~~~iiG~NGsGKSTLlk 53 (214)
T 1sgw_A 33 EKGNVVNFHGPNGIGKTTLLK 53 (214)
T ss_dssp ETTCCEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999764
No 76
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=91.00 E-value=0.066 Score=53.16 Aligned_cols=20 Identities=35% Similarity=0.502 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|+||||||||+.
T Consensus 32 ~~~livl~G~sGsGKSTla~ 51 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRS 51 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35689999999999999876
No 77
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=90.97 E-value=0.068 Score=53.21 Aligned_cols=21 Identities=48% Similarity=0.824 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 45 ~~Ge~~~liG~NGsGKSTLlk 65 (279)
T 2ihy_A 45 AKGDKWILYGLNGAGKTTLLN 65 (279)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 578999999999999999765
No 78
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=90.97 E-value=0.075 Score=50.36 Aligned_cols=21 Identities=33% Similarity=0.306 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|.+|+|||||..
T Consensus 18 ~~g~~i~i~G~~GsGKSTl~~ 38 (230)
T 2vp4_A 18 TQPFTVLIEGNIGSGKTTYLN 38 (230)
T ss_dssp CCCEEEEEECSTTSCHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHH
Confidence 567889999999999999765
No 79
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=90.96 E-value=0.062 Score=48.71 Aligned_cols=19 Identities=37% Similarity=0.691 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++||||||++.
T Consensus 4 ~~~I~i~G~~GsGKsT~~~ 22 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQAT 22 (213)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHH
Confidence 4579999999999999775
No 80
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=90.92 E-value=0.071 Score=52.21 Aligned_cols=21 Identities=38% Similarity=0.684 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 29 ~~Ge~~~l~G~nGsGKSTLl~ 49 (253)
T 2nq2_C 29 NKGDILAVLGQNGCGKSTLLD 49 (253)
T ss_dssp ETTCEEEEECCSSSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999765
No 81
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=90.91 E-value=0.069 Score=53.90 Aligned_cols=20 Identities=45% Similarity=0.712 Sum_probs=17.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|.+++|.|+||+|||||..
T Consensus 101 ~g~vi~lvG~nGsGKTTll~ 120 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIA 120 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHH
Confidence 57899999999999999765
No 82
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=90.87 E-value=0.053 Score=48.59 Aligned_cols=19 Identities=37% Similarity=0.765 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++||||||++.
T Consensus 4 g~~I~l~G~~GsGKST~~~ 22 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQAS 22 (186)
T ss_dssp EEEEEEECCTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999765
No 83
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=90.86 E-value=0.079 Score=55.01 Aligned_cols=21 Identities=48% Similarity=0.681 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (359)
T 2yyz_A 27 KDGEFVALLGPSGCGKTTTLL 47 (359)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCchHHHHHH
Confidence 678999999999999999764
No 84
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=90.83 E-value=0.068 Score=54.07 Aligned_cols=21 Identities=19% Similarity=0.058 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 88 ~~g~ivgI~G~sGsGKSTL~~ 108 (312)
T 3aez_A 88 PVPFIIGVAGSVAVGKSTTAR 108 (312)
T ss_dssp CCCEEEEEECCTTSCHHHHHH
T ss_pred CCCEEEEEECCCCchHHHHHH
Confidence 568899999999999999775
No 85
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=90.79 E-value=0.07 Score=50.94 Aligned_cols=21 Identities=19% Similarity=0.120 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.+.|++|+|||||+.
T Consensus 23 ~~g~iigI~G~~GsGKSTl~k 43 (245)
T 2jeo_A 23 MRPFLIGVSGGTASGKSTVCE 43 (245)
T ss_dssp CCSEEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 457889999999999999775
No 86
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=90.77 E-value=0.081 Score=55.55 Aligned_cols=21 Identities=43% Similarity=0.790 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpsGsGKSTLLr 47 (381)
T 3rlf_A 27 HEGEFVVFVGPSGCGKSTLLR 47 (381)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEEcCCCchHHHHHH
Confidence 678999999999999999754
No 87
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=90.75 E-value=0.073 Score=48.12 Aligned_cols=20 Identities=50% Similarity=0.770 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+||||++.
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~ 31 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIAT 31 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 46789999999999999765
No 88
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=90.69 E-value=0.083 Score=54.91 Aligned_cols=21 Identities=48% Similarity=0.759 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (362)
T 2it1_A 27 KDGEFMALLGPSGSGKSTLLY 47 (362)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHH
Confidence 678999999999999999764
No 89
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=90.69 E-value=0.076 Score=52.04 Aligned_cols=21 Identities=33% Similarity=0.675 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 24 ~~Ge~~~liG~NGsGKSTLlk 44 (249)
T 2qi9_C 24 RAGEILHLVGPNGAGKSTLLA 44 (249)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 578899999999999999765
No 90
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=90.67 E-value=0.077 Score=48.42 Aligned_cols=21 Identities=38% Similarity=0.449 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 21 ~~G~~~~i~G~~GsGKTtl~~ 41 (235)
T 2w0m_A 21 PQGFFIALTGEPGTGKTIFSL 41 (235)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHH
Confidence 357899999999999999765
No 91
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=90.63 E-value=0.084 Score=55.05 Aligned_cols=21 Identities=48% Similarity=0.726 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++++|+||||||||..
T Consensus 35 ~~Ge~~~llGpnGsGKSTLLr 55 (372)
T 1v43_A 35 KDGEFLVLLGPSGCGKTTTLR 55 (372)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999764
No 92
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=90.61 E-value=0.087 Score=47.76 Aligned_cols=20 Identities=40% Similarity=0.602 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|.+|+||||++.
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~ 22 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCM 22 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 36789999999999999765
No 93
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=90.44 E-value=0.082 Score=50.28 Aligned_cols=19 Identities=32% Similarity=0.399 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+|||||..
T Consensus 27 ~~~i~l~G~~GsGKSTl~k 45 (246)
T 2bbw_A 27 LLRAVILGPPGSGKGTVCQ 45 (246)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 5689999999999999765
No 94
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=90.43 E-value=0.081 Score=54.90 Aligned_cols=21 Identities=38% Similarity=0.729 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++++|+||||||||..
T Consensus 39 ~~Ge~~~llGpnGsGKSTLLr 59 (355)
T 1z47_A 39 REGEMVGLLGPSGSGKTTILR 59 (355)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHH
Confidence 578899999999999999764
No 95
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=90.40 E-value=0.082 Score=52.02 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 23 ~~g~~v~i~Gp~GsGKSTll~ 43 (261)
T 2eyu_A 23 RKMGLILVTGPTGSGKSTTIA 43 (261)
T ss_dssp CSSEEEEEECSTTCSHHHHHH
T ss_pred CCCCEEEEECCCCccHHHHHH
Confidence 557789999999999999665
No 96
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=90.40 E-value=0.092 Score=47.91 Aligned_cols=21 Identities=33% Similarity=0.502 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 18 ~~G~~~~i~G~~GsGKTtl~~ 38 (220)
T 2cvh_A 18 APGVLTQVYGPYASGKTTLAL 38 (220)
T ss_dssp CTTSEEEEECSTTSSHHHHHH
T ss_pred cCCEEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 97
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=90.39 E-value=0.081 Score=47.13 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=12.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++||||||++.
T Consensus 5 ~~~I~l~G~~GsGKST~a~ 23 (183)
T 2vli_A 5 SPIIWINGPFGVGKTHTAH 23 (183)
T ss_dssp CCEEEEECCC----CHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999765
No 98
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=90.37 E-value=0.083 Score=48.89 Aligned_cols=20 Identities=45% Similarity=0.386 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..+.+.|.||+|||||+.
T Consensus 21 ~~~~i~i~G~~GsGKstl~~ 40 (201)
T 1rz3_A 21 GRLVLGIDGLSRSGKTTLAN 40 (201)
T ss_dssp SSEEEEEEECTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 99
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=90.35 E-value=0.083 Score=55.00 Aligned_cols=21 Identities=48% Similarity=0.749 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (372)
T 1g29_1 27 KDGEFMILLGPSGCGKTTTLR 47 (372)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHH
Confidence 578999999999999999764
No 100
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=90.31 E-value=0.098 Score=46.98 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|+||||++.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~ 27 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCE 27 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 45689999999999999765
No 101
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=90.30 E-value=0.1 Score=52.41 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 62 ~~Ge~~~i~G~NGsGKSTLlk 82 (290)
T 2bbs_A 62 ERGQLLAVAGSTGAGKTSLLM 82 (290)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999764
No 102
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=90.28 E-value=0.099 Score=53.16 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 124 ~~Ge~vaIvGpsGsGKSTLl~ 144 (305)
T 2v9p_A 124 PKKNCLAFIGPPNTGKSMLCN 144 (305)
T ss_dssp TTCSEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678899999999999999765
No 103
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=90.24 E-value=0.096 Score=45.54 Aligned_cols=19 Identities=26% Similarity=0.517 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|++|||||||..
T Consensus 43 ~~~~ll~G~~G~GKT~l~~ 61 (195)
T 1jbk_A 43 KNNPVLIGEPGVGKTAIVE 61 (195)
T ss_dssp SCEEEEECCTTSCHHHHHH
T ss_pred CCceEEECCCCCCHHHHHH
Confidence 4568999999999999764
No 104
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=90.21 E-value=0.074 Score=50.25 Aligned_cols=18 Identities=44% Similarity=0.529 Sum_probs=15.5
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
+.++|.|+||+|||||..
T Consensus 2 RpIVi~GPSG~GK~Tl~~ 19 (186)
T 1ex7_A 2 RPIVISGPSGTGKSTLLK 19 (186)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 458999999999999764
No 105
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=90.17 E-value=0.19 Score=47.22 Aligned_cols=44 Identities=34% Similarity=0.486 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHhcccCceeeeccccccC-CCCCEEEEEeCCCCCcccccc
Q 008519 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 303 EmKK~iLTl~n~ll~~~G~LpmHgsanv~-~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+..+..++...+-+.. .+ .....++|.|++|||||+|+.
T Consensus 13 ~~~~~l~~~~~~~~~~~~~~~------~g~~~~~~vll~G~~GtGKT~la~ 57 (262)
T 2qz4_A 13 EAKLEVREFVDYLKSPERFLQ------LGAKVPKGALLLGPPGCGKTLLAK 57 (262)
T ss_dssp HHHHHHHHHHHHHHCCC------------CCCCCEEEEESCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHCHHHHHH------cCCCCCceEEEECCCCCCHHHHHH
Confidence 467777666655333222211 11 234579999999999999765
No 106
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=90.10 E-value=0.098 Score=51.70 Aligned_cols=20 Identities=40% Similarity=0.735 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
. |+.+++.|+||+|||||..
T Consensus 29 ~-Ge~~~i~G~NGsGKSTLlk 48 (263)
T 2pjz_A 29 N-GEKVIILGPNGSGKTTLLR 48 (263)
T ss_dssp C-SSEEEEECCTTSSHHHHHH
T ss_pred C-CEEEEEECCCCCCHHHHHH
Confidence 5 9999999999999999765
No 107
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=90.10 E-value=0.092 Score=48.68 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|++|+|||||..
T Consensus 22 ~~G~~~~i~G~~GsGKTtl~~ 42 (243)
T 1n0w_A 22 ETGSITEMFGEFRTGKTQICH 42 (243)
T ss_dssp ETTSEEEEECCTTSSHHHHHH
T ss_pred cCCeEEEEECCCCCcHHHHHH
Confidence 457899999999999999764
No 108
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=90.08 E-value=0.097 Score=50.54 Aligned_cols=21 Identities=38% Similarity=0.344 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.|.|+||||||||..
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k 45 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCK 45 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 109
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=90.07 E-value=0.08 Score=49.71 Aligned_cols=19 Identities=37% Similarity=0.494 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|+.++|.|++|+|||||..
T Consensus 1 G~~i~i~G~nG~GKTTll~ 19 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIH 19 (189)
T ss_dssp CCCEEEESCCSSCHHHHHH
T ss_pred CCEEEEECCCCChHHHHHH
Confidence 5678999999999999765
No 110
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=90.06 E-value=0.098 Score=47.81 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|||||||+.
T Consensus 51 ~~~~~ll~G~~G~GKT~la~ 70 (242)
T 3bos_A 51 GVQAIYLWGPVKSGRTHLIH 70 (242)
T ss_dssp SCSEEEEECSTTSSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHH
Confidence 35689999999999999865
No 111
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=90.06 E-value=0.05 Score=49.01 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+||||++.
T Consensus 12 ~~~I~l~G~~GsGKsT~a~ 30 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCE 30 (199)
T ss_dssp SCEEEEEECTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 5689999999999999775
No 112
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=90.05 E-value=0.079 Score=47.71 Aligned_cols=17 Identities=41% Similarity=0.690 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+||||||++.
T Consensus 2 ~I~i~G~~GsGKsT~~~ 18 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISA 18 (205)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCccCHHHHHH
Confidence 47899999999999765
No 113
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=90.04 E-value=0.1 Score=47.56 Aligned_cols=20 Identities=40% Similarity=0.592 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..+++.|.+||||||++.
T Consensus 9 ~~~~I~l~G~~GsGKSTv~~ 28 (184)
T 1y63_A 9 KGINILITGTPGTGKTSMAE 28 (184)
T ss_dssp SSCEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 114
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=90.03 E-value=0.076 Score=54.87 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++++|+||||||||..
T Consensus 24 ~~Ge~~~llGpnGsGKSTLLr 44 (348)
T 3d31_A 24 ESGEYFVILGPTGAGKTLFLE 44 (348)
T ss_dssp CTTCEEEEECCCTHHHHHHHH
T ss_pred cCCCEEEEECCCCccHHHHHH
Confidence 678999999999999999764
No 115
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=89.86 E-value=0.082 Score=51.28 Aligned_cols=29 Identities=21% Similarity=0.431 Sum_probs=20.8
Q ss_pred EEEEEeCCCCCccccccc----CCCceee-cCce
Q 008519 336 VALFFGLSGTGKTTLSTD----HNRYLIG-DDEH 364 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsad----~~r~lIg-DDe~ 364 (563)
.++++|++|||||||+.. .+..+|. |+.+
T Consensus 3 li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~ 36 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQ 36 (253)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGG
T ss_pred EEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHh
Confidence 589999999999998762 2444554 5543
No 116
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=89.83 E-value=0.1 Score=48.31 Aligned_cols=17 Identities=41% Similarity=0.546 Sum_probs=14.8
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 2 ~i~l~G~nGsGKTTLl~ 18 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVK 18 (178)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999764
No 117
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=89.79 E-value=0.057 Score=49.35 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.||+|||||+.
T Consensus 2 ~I~i~G~~GsGKsTl~~ 18 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVE 18 (214)
T ss_dssp EEEEEEEEEEEHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 58999999999999775
No 118
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=89.72 E-value=0.099 Score=48.54 Aligned_cols=21 Identities=38% Similarity=0.569 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|++|+||||++.
T Consensus 23 ~~~~~i~~~G~~GsGKsT~~~ 43 (211)
T 1m7g_A 23 QRGLTIWLTGLSASGKSTLAV 43 (211)
T ss_dssp SSCEEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 456789999999999999775
No 119
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=89.67 E-value=0.071 Score=55.08 Aligned_cols=21 Identities=38% Similarity=0.570 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++++|+||||||||..
T Consensus 29 ~~Ge~~~llGpnGsGKSTLLr 49 (353)
T 1oxx_K 29 ENGERFGILGPSGAGKTTFMR 49 (353)
T ss_dssp CTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999764
No 120
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=89.64 E-value=0.094 Score=45.84 Aligned_cols=19 Identities=26% Similarity=0.531 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|++|||||||+.
T Consensus 43 ~~~vll~G~~G~GKT~la~ 61 (187)
T 2p65_A 43 KNNPILLGDPGVGKTAIVE 61 (187)
T ss_dssp SCEEEEESCGGGCHHHHHH
T ss_pred CCceEEECCCCCCHHHHHH
Confidence 4568999999999999765
No 121
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=89.64 E-value=0.11 Score=54.17 Aligned_cols=21 Identities=38% Similarity=0.553 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.+.|+||+|||||..
T Consensus 52 ~~Gei~~IiGpnGaGKSTLlr 72 (366)
T 3tui_C 52 PAGQIYGVIGASGAGKSTLIR 72 (366)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCchHHHHHH
Confidence 679999999999999999764
No 122
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=89.62 E-value=0.085 Score=50.77 Aligned_cols=20 Identities=40% Similarity=0.454 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|+||||++.
T Consensus 31 ~~~~i~l~G~~GsGKSTla~ 50 (253)
T 2p5t_B 31 QPIAILLGGQSGAGKTTIHR 50 (253)
T ss_dssp SCEEEEEESCGGGTTHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35689999999999999876
No 123
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=89.57 E-value=0.12 Score=46.89 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|.+|+|||||..
T Consensus 24 ~~~~~v~lvG~~g~GKSTLl~ 44 (210)
T 1pui_A 24 DTGIEVAFAGRSNAGKSSALN 44 (210)
T ss_dssp SCSEEEEEEECTTSSHHHHHT
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457789999999999999765
No 124
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=89.56 E-value=0.096 Score=46.67 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+||||||++.
T Consensus 3 ~~~I~l~G~~GsGKsT~a~ 21 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCA 21 (196)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3569999999999999875
No 125
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=89.54 E-value=0.094 Score=52.80 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHhcccCceeeecccccc-CCCCCEEEEEeCCCCCcccccc
Q 008519 303 EMKKGLFSVMHYLMPKRQILSLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 303 EmKK~iLTl~n~ll~~~G~LpmHgsanv-~~~G~v~lfFGLSGTGKTTLsa 352 (563)
++++.+...+--++.....+ -..+. ...|.+++|.|++|+|||||..
T Consensus 71 ~~~~~~~~~l~~~l~~~~~~---~~l~~~~~~g~vi~lvG~nGsGKTTll~ 118 (302)
T 3b9q_A 71 EIKDALKESVLEMLAKKNSK---TELQLGFRKPAVIMIVGVNGGGKTTSLG 118 (302)
T ss_dssp HHHHHHHHHHHHHHCC--CC---CSCCCCSSSCEEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcccc---cccccccCCCcEEEEEcCCCCCHHHHHH
Confidence 46666665554444321100 01222 2468899999999999999765
No 126
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=89.46 E-value=0.14 Score=44.56 Aligned_cols=24 Identities=33% Similarity=0.360 Sum_probs=19.3
Q ss_pred ccCCCCCEEEEEeCCCCCcccccc
Q 008519 329 NMGKDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 329 nv~~~G~v~lfFGLSGTGKTTLsa 352 (563)
++.+....++|+|++|+|||||..
T Consensus 3 ~~~~~~~~i~v~G~~~~GKssl~~ 26 (178)
T 2lkc_A 3 HMVERPPVVTIMGHVDHGKTTLLD 26 (178)
T ss_dssp TTCCCCCEEEEESCTTTTHHHHHH
T ss_pred CcCCCCCEEEEECCCCCCHHHHHH
Confidence 344556689999999999999765
No 127
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=89.24 E-value=0.095 Score=53.16 Aligned_cols=21 Identities=33% Similarity=0.526 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 78 ~~Ge~vaivG~sGsGKSTLl~ 98 (306)
T 3nh6_A 78 MPGQTLALVGPSGAGKSTILR 98 (306)
T ss_dssp CTTCEEEEESSSCHHHHHHHH
T ss_pred cCCCEEEEECCCCchHHHHHH
Confidence 678999999999999999765
No 128
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=89.23 E-value=0.12 Score=51.66 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.+.|.||+|||||+.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~ 98 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTAR 98 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 356789999999999999765
No 129
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=89.22 E-value=0.1 Score=48.13 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAE 18 (216)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999775
No 130
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=89.06 E-value=0.1 Score=49.50 Aligned_cols=16 Identities=44% Similarity=0.717 Sum_probs=14.8
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|+|++|||||||..
T Consensus 52 ~ll~G~~G~GKTtl~~ 67 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLAR 67 (254)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999999999999765
No 131
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=89.00 E-value=0.11 Score=46.61 Aligned_cols=17 Identities=41% Similarity=0.800 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++||||||++.
T Consensus 6 ~i~i~G~~GsGKsTla~ 22 (175)
T 1via_A 6 NIVFIGFMGSGKSTLAR 22 (175)
T ss_dssp CEEEECCTTSCHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 58899999999999865
No 132
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=88.97 E-value=0.11 Score=46.75 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~~~ 18 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQ 18 (197)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999776
No 133
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=88.94 E-value=0.14 Score=49.87 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=17.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
.. ..+++.|+||+|||||..
T Consensus 23 ~~-e~~~liG~nGsGKSTLl~ 42 (240)
T 2onk_A 23 GR-DYCVLLGPTGAGKSVFLE 42 (240)
T ss_dssp CS-SEEEEECCTTSSHHHHHH
T ss_pred CC-EEEEEECCCCCCHHHHHH
Confidence 44 899999999999999765
No 134
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=88.87 E-value=0.11 Score=47.98 Aligned_cols=17 Identities=35% Similarity=0.591 Sum_probs=14.9
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGE 18 (216)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999775
No 135
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=88.82 E-value=0.13 Score=46.80 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=16.2
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||||+.
T Consensus 55 ~~~~l~G~~GtGKT~la~ 72 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLA 72 (202)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 679999999999999864
No 136
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=88.78 E-value=0.15 Score=53.49 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+.+.|+||||||||..
T Consensus 45 ~~Ge~~~llGpsGsGKSTLLr 65 (390)
T 3gd7_A 45 SPGQRVGLLGRTGSGKSTLLS 65 (390)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999654
No 137
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=88.74 E-value=0.12 Score=46.03 Aligned_cols=17 Identities=41% Similarity=0.692 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~~~ 18 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAK 18 (195)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57899999999999775
No 138
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=88.70 E-value=0.14 Score=47.58 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|+||||++.
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~ 22 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAP 22 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 35679999999999999765
No 139
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=88.64 E-value=0.13 Score=47.23 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|.+||||||++.
T Consensus 4 ~i~l~G~~GsGKST~~~ 20 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIAN 20 (206)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58899999999999765
No 140
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=88.64 E-value=0.13 Score=48.93 Aligned_cols=18 Identities=44% Similarity=0.612 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|||||||+.
T Consensus 46 ~~vll~G~~GtGKT~la~ 63 (257)
T 1lv7_A 46 KGVLMVGPPGTGKTLLAK 63 (257)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred CeEEEECcCCCCHHHHHH
Confidence 459999999999999765
No 141
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=88.60 E-value=0.14 Score=49.58 Aligned_cols=21 Identities=38% Similarity=0.574 Sum_probs=17.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+..++|+|++|||||||+.
T Consensus 52 ~~~~~vll~Gp~GtGKT~la~ 72 (297)
T 3b9p_A 52 APAKGLLLFGPPGNGKTLLAR 72 (297)
T ss_dssp CCCSEEEEESSSSSCHHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHHH
Confidence 346789999999999999764
No 142
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=88.58 E-value=0.15 Score=50.28 Aligned_cols=21 Identities=38% Similarity=0.639 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..++.++|+|++|||||||+.
T Consensus 47 ~~~~~vLL~Gp~GtGKT~la~ 67 (301)
T 3cf0_A 47 TPSKGVLFYGPPGCGKTLLAK 67 (301)
T ss_dssp CCCSEEEEECSSSSSHHHHHH
T ss_pred CCCceEEEECCCCcCHHHHHH
Confidence 346789999999999999764
No 143
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=88.50 E-value=0.12 Score=45.60 Aligned_cols=18 Identities=28% Similarity=0.506 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+||||++.
T Consensus 3 ~~I~l~G~~GsGKsT~a~ 20 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGR 20 (173)
T ss_dssp CCEEEESCTTSSHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 358999999999999765
No 144
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=88.42 E-value=0.18 Score=48.84 Aligned_cols=21 Identities=38% Similarity=0.379 Sum_probs=17.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.+..++|+|++|||||+|+.
T Consensus 65 ~~~~~vll~G~~GtGKT~la~ 85 (309)
T 3syl_A 65 TPTLHMSFTGNPGTGKTTVAL 85 (309)
T ss_dssp CCCCEEEEEECTTSSHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHH
Confidence 345679999999999999874
No 145
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=88.37 E-value=0.15 Score=49.45 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 28 ~~G~i~~i~G~~GsGKTtl~~ 48 (279)
T 1nlf_A 28 VAGTVGALVSPGGAGKSMLAL 48 (279)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHH
Confidence 468899999999999999764
No 146
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=88.37 E-value=0.12 Score=52.70 Aligned_cols=21 Identities=38% Similarity=0.631 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|.+++|.|+||+|||||..
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~ 147 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIA 147 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 147
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=88.28 E-value=0.15 Score=46.53 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|.+||||||++.
T Consensus 3 ~i~i~G~~GsGKSTl~~ 19 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQ 19 (204)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 58999999999999765
No 148
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=88.19 E-value=0.17 Score=48.56 Aligned_cols=20 Identities=40% Similarity=0.587 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|||||+|+.
T Consensus 50 ~~~~~ll~G~~GtGKT~la~ 69 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLAK 69 (285)
T ss_dssp CCSEEEEESSSSSSHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHH
Confidence 35679999999999999765
No 149
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=88.18 E-value=0.14 Score=47.64 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+||||++.
T Consensus 5 ~~~I~l~G~~GsGKsT~~~ 23 (222)
T 1zak_A 5 PLKVMISGAPASGKGTQCE 23 (222)
T ss_dssp SCCEEEEESTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 150
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=88.11 E-value=0.14 Score=45.01 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+|+||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGS 18 (168)
T ss_dssp EEEEESCTTSCHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 48899999999999765
No 151
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=88.09 E-value=0.15 Score=46.46 Aligned_cols=19 Identities=32% Similarity=0.410 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|.+|+||||++.
T Consensus 15 ~~~I~l~G~~GsGKsT~~~ 33 (203)
T 1ukz_A 15 VSVIFVLGGPGAGKGTQCE 33 (203)
T ss_dssp CEEEEEECSTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 4579999999999999774
No 152
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=88.08 E-value=0.16 Score=45.32 Aligned_cols=20 Identities=25% Similarity=0.400 Sum_probs=16.9
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+|||||..
T Consensus 3 ~~~ki~ivG~~g~GKStLl~ 22 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLN 22 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46679999999999999765
No 153
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=88.05 E-value=0.2 Score=45.45 Aligned_cols=17 Identities=35% Similarity=0.585 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 31 kv~lvG~~g~GKSTLl~ 47 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLS 47 (191)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 154
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=88.02 E-value=0.17 Score=47.46 Aligned_cols=19 Identities=37% Similarity=0.475 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+||||++.
T Consensus 7 ~~~I~l~G~~GsGKsT~a~ 25 (227)
T 1zd8_A 7 LLRAVIMGAPGSGKGTVSS 25 (227)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 4679999999999999775
No 155
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=87.92 E-value=0.13 Score=50.53 Aligned_cols=19 Identities=37% Similarity=0.700 Sum_probs=17.2
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|+||+||||+..
T Consensus 48 g~~i~l~G~~GsGKSTl~~ 66 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGK 66 (250)
T ss_dssp TCCEEEECSTTSCHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 7789999999999999765
No 156
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=87.91 E-value=0.15 Score=45.25 Aligned_cols=18 Identities=33% Similarity=0.571 Sum_probs=16.0
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|.+||||||++.
T Consensus 7 ~~I~l~G~~GsGKsT~~~ 24 (194)
T 1qf9_A 7 NVVFVLGGPGSGKGTQCA 24 (194)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 479999999999999765
No 157
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=87.75 E-value=0.18 Score=46.78 Aligned_cols=21 Identities=43% Similarity=0.597 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||+.
T Consensus 21 ~~G~~~~i~G~~GsGKTtl~~ 41 (247)
T 2dr3_A 21 PERNVVLLSGGPGTGKTIFSQ 41 (247)
T ss_dssp ETTCEEEEEECTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999754
No 158
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=87.74 E-value=0.14 Score=45.86 Aligned_cols=18 Identities=39% Similarity=0.737 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+||||++.
T Consensus 3 ~~I~l~G~~GsGKsT~a~ 20 (184)
T 2iyv_A 3 PKAVLVGLPGSGKSTIGR 20 (184)
T ss_dssp CSEEEECSTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 358999999999999875
No 159
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=87.66 E-value=0.19 Score=53.32 Aligned_cols=20 Identities=35% Similarity=0.436 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++++|+||||||||..
T Consensus 156 ~Gq~~~IvG~sGsGKSTLl~ 175 (438)
T 2dpy_A 156 RGQRMGLFAGSGVGKSVLLG 175 (438)
T ss_dssp TTCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 57789999999999999754
No 160
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=87.63 E-value=0.16 Score=44.65 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=16.9
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|+|++|||||+++.
T Consensus 23 ~~~~vll~G~~GtGKt~lA~ 42 (145)
T 3n70_A 23 TDIAVWLYGAPGTGRMTGAR 42 (145)
T ss_dssp CCSCEEEESSTTSSHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHH
Confidence 34569999999999999864
No 161
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=87.63 E-value=0.19 Score=48.95 Aligned_cols=21 Identities=33% Similarity=0.544 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|.+|+|||||..
T Consensus 33 ~~G~~~~i~G~~G~GKTTl~~ 53 (296)
T 1cr0_A 33 RGGEVIMVTSGSGMGKSTFVR 53 (296)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHH
Confidence 678999999999999999764
No 162
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=87.56 E-value=0.19 Score=51.73 Aligned_cols=20 Identities=40% Similarity=0.401 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|+|++|+|||||..
T Consensus 70 ~Gq~~gIiG~nGaGKTTLl~ 89 (347)
T 2obl_A 70 IGQRIGIFAGSGVGKSTLLG 89 (347)
T ss_dssp TTCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 47799999999999999754
No 163
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=87.54 E-value=0.18 Score=45.51 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...+++.|.+||||||++.
T Consensus 8 ~~~I~i~G~~GsGKST~~~ 26 (203)
T 1uf9_A 8 PIIIGITGNIGSGKSTVAA 26 (203)
T ss_dssp CEEEEEEECTTSCHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3579999999999999765
No 164
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=87.39 E-value=0.15 Score=50.19 Aligned_cols=16 Identities=44% Similarity=0.642 Sum_probs=14.7
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|+|++|||||||..
T Consensus 47 vlL~Gp~GtGKTtLak 62 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAK 62 (274)
T ss_dssp EEEESSTTSCHHHHHH
T ss_pred EEEECCCCCcHHHHHH
Confidence 9999999999999764
No 165
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=87.34 E-value=0.15 Score=49.28 Aligned_cols=16 Identities=44% Similarity=0.717 Sum_probs=14.7
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|+|++|||||||..
T Consensus 76 vll~Gp~GtGKTtl~~ 91 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLAR 91 (278)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCcChHHHHHH
Confidence 9999999999999765
No 166
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=87.33 E-value=0.16 Score=52.81 Aligned_cols=21 Identities=33% Similarity=0.510 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|.+++|.|++|+|||||..
T Consensus 155 ~~g~vi~lvG~nGsGKTTll~ 175 (359)
T 2og2_A 155 RKPAVIMIVGVNGGGKTTSLG 175 (359)
T ss_dssp SSSEEEEEECCTTSCHHHHHH
T ss_pred CCCeEEEEEcCCCChHHHHHH
Confidence 458899999999999999765
No 167
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=87.26 E-value=0.19 Score=49.62 Aligned_cols=17 Identities=41% Similarity=0.585 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
+++|.|+||+|||||..
T Consensus 4 ~v~lvG~nGaGKSTLln 20 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVN 20 (270)
T ss_dssp EEEEEESSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58899999999999765
No 168
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=87.10 E-value=0.19 Score=46.61 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+||||||++.
T Consensus 4 ~~~I~i~G~~GSGKST~~~ 22 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVAN 22 (218)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4579999999999999765
No 169
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=87.10 E-value=0.18 Score=48.25 Aligned_cols=20 Identities=35% Similarity=0.436 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+||||++.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~ 44 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVIN 44 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHH
Confidence 57789999999999999765
No 170
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=86.97 E-value=0.2 Score=49.70 Aligned_cols=19 Identities=42% Similarity=0.700 Sum_probs=16.8
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
++.++|.|++|||||+|+.
T Consensus 70 ~~~vLl~GppGtGKT~la~ 88 (368)
T 3uk6_A 70 GRAVLIAGQPGTGKTAIAM 88 (368)
T ss_dssp TCEEEEEESTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 5689999999999999765
No 171
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=86.91 E-value=0.16 Score=50.86 Aligned_cols=18 Identities=50% Similarity=0.669 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||||..
T Consensus 52 ~~~ll~Gp~G~GKTTLa~ 69 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAH 69 (334)
T ss_dssp CCEEEESSTTSSHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 468999999999999865
No 172
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=86.77 E-value=0.18 Score=44.37 Aligned_cols=19 Identities=16% Similarity=0.225 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+|||||+++.
T Consensus 27 ~~~vll~G~~GtGKt~lA~ 45 (143)
T 3co5_A 27 TSPVFLTGEAGSPFETVAR 45 (143)
T ss_dssp SSCEEEEEETTCCHHHHHG
T ss_pred CCcEEEECCCCccHHHHHH
Confidence 3469999999999999875
No 173
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=86.75 E-value=0.12 Score=47.84 Aligned_cols=18 Identities=44% Similarity=0.473 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
+.++|.|.||+|||||..
T Consensus 3 ~~v~IvG~SGsGKSTL~~ 20 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLIT 20 (171)
T ss_dssp CEEEEEESCHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 174
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=86.73 E-value=0.19 Score=48.61 Aligned_cols=19 Identities=37% Similarity=0.558 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|++|+||||++.
T Consensus 4 ~~lIvl~G~pGSGKSTla~ 22 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSK 22 (260)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHH
Confidence 3469999999999999775
No 175
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=86.67 E-value=0.2 Score=48.02 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|+|++|+||||++.
T Consensus 29 ~~~I~l~G~~GsGKsT~a~ 47 (243)
T 3tlx_A 29 DGRYIFLGAPGSGKGTQSL 47 (243)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 4579999999999999876
No 176
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=86.62 E-value=0.19 Score=51.50 Aligned_cols=21 Identities=38% Similarity=0.469 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 173 ~~G~~i~ivG~sGsGKSTll~ 193 (361)
T 2gza_A 173 QLERVIVVAGETGSGKTTLMK 193 (361)
T ss_dssp HTTCCEEEEESSSSCHHHHHH
T ss_pred hcCCEEEEECCCCCCHHHHHH
Confidence 467789999999999999765
No 177
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=86.55 E-value=0.22 Score=49.50 Aligned_cols=20 Identities=40% Similarity=0.740 Sum_probs=17.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|+||+|||||..
T Consensus 168 ~geiv~l~G~sG~GKSTll~ 187 (301)
T 1u0l_A 168 KGKISTMAGLSGVGKSSLLN 187 (301)
T ss_dssp SSSEEEEECSTTSSHHHHHH
T ss_pred cCCeEEEECCCCCcHHHHHH
Confidence 47899999999999999765
No 178
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=86.52 E-value=0.22 Score=44.60 Aligned_cols=18 Identities=39% Similarity=0.661 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+|||||..
T Consensus 46 ~~~ll~G~~G~GKT~l~~ 63 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIAR 63 (250)
T ss_dssp SEEEEECSTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 478999999999999765
No 179
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=86.43 E-value=0.2 Score=50.05 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=17.3
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..+++.|.||+|||||+.
T Consensus 30 ~~~ii~I~G~sGsGKSTla~ 49 (290)
T 1odf_A 30 CPLFIFFSGPQGSGKSFTSI 49 (290)
T ss_dssp SCEEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35679999999999999875
No 180
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=86.42 E-value=0.23 Score=49.61 Aligned_cols=20 Identities=30% Similarity=0.650 Sum_probs=17.9
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|.+++|.|+||+|||||..
T Consensus 164 ~G~i~~l~G~sG~GKSTLln 183 (302)
T 2yv5_A 164 EGFICILAGPSGVGKSSILS 183 (302)
T ss_dssp TTCEEEEECSTTSSHHHHHH
T ss_pred cCcEEEEECCCCCCHHHHHH
Confidence 47899999999999999765
No 181
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=86.28 E-value=0.24 Score=44.36 Aligned_cols=16 Identities=25% Similarity=0.625 Sum_probs=14.6
Q ss_pred EEEEEeCCCCCccccc
Q 008519 336 VALFFGLSGTGKTTLS 351 (563)
Q Consensus 336 v~lfFGLSGTGKTTLs 351 (563)
..+|.|++|+|||||.
T Consensus 28 ~~~i~G~NGsGKStll 43 (182)
T 3kta_A 28 FTAIVGANGSGKSNIG 43 (182)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 8999999999999954
No 182
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=86.26 E-value=0.17 Score=51.42 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=17.2
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|.||||||||..
T Consensus 170 g~k~~IvG~nGsGKSTLlk 188 (365)
T 1lw7_A 170 AKTVAILGGESSGKSVLVN 188 (365)
T ss_dssp CEEEEEECCTTSHHHHHHH
T ss_pred hCeEEEECCCCCCHHHHHH
Confidence 6789999999999999765
No 183
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=86.02 E-value=0.25 Score=49.52 Aligned_cols=21 Identities=33% Similarity=0.529 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|.+++|.|++|+||||++.
T Consensus 103 ~~g~vi~lvG~~GsGKTTl~~ 123 (296)
T 2px0_A 103 IHSKYIVLFGSTGAGKTTTLA 123 (296)
T ss_dssp CCSSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999665
No 184
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=86.01 E-value=0.26 Score=53.42 Aligned_cols=21 Identities=33% Similarity=0.653 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 367 ~~G~~~~ivG~sGsGKSTLl~ 387 (582)
T 3b60_A 367 PAGKTVALVGRSGSGKSTIAS 387 (582)
T ss_dssp CTTCEEEEEECTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 185
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=85.99 E-value=0.21 Score=44.49 Aligned_cols=17 Identities=47% Similarity=0.606 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||+|..
T Consensus 40 ~~ll~G~~G~GKT~l~~ 56 (226)
T 2chg_A 40 HLLFSGPPGTGKTATAI 56 (226)
T ss_dssp CEEEECSTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 39999999999999764
No 186
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=85.98 E-value=0.22 Score=48.37 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|+||+||||++.
T Consensus 3 ~~I~l~G~~GsGKST~a~ 20 (301)
T 1ltq_A 3 KIILTIGCPGSGKSTWAR 20 (301)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 368999999999999775
No 187
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=85.96 E-value=0.27 Score=53.45 Aligned_cols=21 Identities=38% Similarity=0.659 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 368 ~~G~~~~ivG~sGsGKSTLl~ 388 (595)
T 2yl4_A 368 PSGSVTALVGPSGSGKSTVLS 388 (595)
T ss_dssp CTTCEEEEECCTTSSSTHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 188
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=85.90 E-value=0.23 Score=43.94 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|.+||||||++.
T Consensus 8 ~~i~l~G~~GsGKSTva~ 25 (168)
T 1zuh_A 8 QHLVLIGFMGSGKSSLAQ 25 (168)
T ss_dssp CEEEEESCTTSSHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 189
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=85.88 E-value=0.26 Score=41.69 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++++|.+|+|||||..
T Consensus 5 ~i~v~G~~~~GKssl~~ 21 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTI 21 (166)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999765
No 190
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=85.83 E-value=0.24 Score=44.83 Aligned_cols=17 Identities=35% Similarity=0.585 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 7 kv~lvG~~g~GKSTLl~ 23 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNLLS 23 (199)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 58999999999999764
No 191
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=85.74 E-value=0.25 Score=44.22 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|+||+|||||..
T Consensus 4 kv~ivG~~gvGKStLl~ 20 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQ 20 (184)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 192
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=85.48 E-value=0.27 Score=48.97 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=13.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...+++.|.||+||||++.
T Consensus 5 ~~iIgItG~sGSGKSTva~ 23 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKH 23 (290)
T ss_dssp SCEEEEESCC---CCTHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4579999999999999876
No 193
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=85.45 E-value=0.22 Score=47.78 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|||||+|+.
T Consensus 65 ~~vLl~G~~GtGKT~la~ 82 (272)
T 1d2n_A 65 VSVLLEGPPHSGKTALAA 82 (272)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCcHHHHHH
Confidence 468999999999999875
No 194
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=85.45 E-value=0.18 Score=55.23 Aligned_cols=21 Identities=48% Similarity=0.814 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|.+++|.|+||||||||..
T Consensus 367 ~~G~iI~LiG~sGSGKSTLar 387 (552)
T 3cr8_A 367 RQGFTVFFTGLSGAGKSTLAR 387 (552)
T ss_dssp GSCEEEEEEESSCHHHHHHHH
T ss_pred ccceEEEEECCCCChHHHHHH
Confidence 357899999999999999765
No 195
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=85.45 E-value=0.32 Score=44.38 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-..++|.|++|+|||||..
T Consensus 12 ~~~i~~~G~~g~GKTsl~~ 30 (218)
T 1nrj_B 12 QPSIIIAGPQNSGKTSLLT 30 (218)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 196
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=85.44 E-value=0.27 Score=43.19 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 5 ~v~lvG~~gvGKStL~~ 21 (165)
T 2wji_A 5 EIALIGNPNVGKSTIFN 21 (165)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 197
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=85.42 E-value=0.24 Score=45.97 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+|+||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQ 18 (214)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999765
No 198
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=85.41 E-value=0.22 Score=49.04 Aligned_cols=19 Identities=37% Similarity=0.531 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|+|++|||||||..
T Consensus 37 ~~~lll~G~~GtGKT~la~ 55 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQ 55 (324)
T ss_dssp CSSEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 4579999999999999865
No 199
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=85.36 E-value=0.26 Score=48.92 Aligned_cols=19 Identities=37% Similarity=0.611 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|||||+|+.
T Consensus 51 ~~~vLl~GppGtGKT~la~ 69 (322)
T 3eie_A 51 TSGILLYGPPGTGKSYLAK 69 (322)
T ss_dssp CCEEEEECSSSSCHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 4579999999999999765
No 200
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=85.36 E-value=0.29 Score=53.17 Aligned_cols=21 Identities=43% Similarity=0.803 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 365 ~~G~~~~ivG~sGsGKSTll~ 385 (578)
T 4a82_A 365 EKGETVAFVGMSGGGKSTLIN 385 (578)
T ss_dssp CTTCEEEEECSTTSSHHHHHT
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999765
No 201
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=85.32 E-value=0.24 Score=50.29 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=17.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 169 ~~g~~v~i~G~~GsGKTTll~ 189 (330)
T 2pt7_A 169 AIGKNVIVCGGTGSGKTTYIK 189 (330)
T ss_dssp HHTCCEEEEESTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 456789999999999999665
No 202
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=85.11 E-value=0.29 Score=53.15 Aligned_cols=21 Identities=33% Similarity=0.656 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 367 ~~G~~~~ivG~sGsGKSTll~ 387 (582)
T 3b5x_A 367 PQGKTVALVGRSGSGKSTIAN 387 (582)
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 203
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=85.09 E-value=0.28 Score=50.65 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=18.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|+||+|||||..
T Consensus 134 ~~g~~i~ivG~~GsGKTTll~ 154 (372)
T 2ewv_A 134 RKMGLILVTGPTGSGKSTTIA 154 (372)
T ss_dssp SSSEEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 457789999999999999665
No 204
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=85.05 E-value=0.3 Score=45.60 Aligned_cols=19 Identities=26% Similarity=0.443 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+||||||++.
T Consensus 5 ~~~I~l~G~~GsGKsT~a~ 23 (217)
T 3be4_A 5 KHNLILIGAPGSGKGTQCE 23 (217)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3569999999999999765
No 205
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=84.92 E-value=0.28 Score=53.49 Aligned_cols=21 Identities=43% Similarity=0.502 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|.+++|.|+||+|||||..
T Consensus 291 ~~GeVI~LVGpNGSGKTTLl~ 311 (503)
T 2yhs_A 291 KAPFVILMVGVNGVGKTTTIG 311 (503)
T ss_dssp CTTEEEEEECCTTSSHHHHHH
T ss_pred cCCeEEEEECCCcccHHHHHH
Confidence 468899999999999999765
No 206
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=84.88 E-value=0.27 Score=48.18 Aligned_cols=20 Identities=35% Similarity=0.687 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|+|||||..
T Consensus 44 ~~~~vli~G~~G~GKTtl~~ 63 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVK 63 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHH
Confidence 45679999999999999765
No 207
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=84.85 E-value=0.3 Score=45.44 Aligned_cols=18 Identities=50% Similarity=0.580 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|.||+|||||..
T Consensus 7 ~~i~i~G~sGsGKTTl~~ 24 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLK 24 (174)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHH
Confidence 478999999999999765
No 208
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=84.83 E-value=0.25 Score=47.40 Aligned_cols=20 Identities=30% Similarity=0.514 Sum_probs=17.0
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|||||+|+.
T Consensus 49 ~~~~vll~G~~GtGKT~la~ 68 (310)
T 1ofh_A 49 TPKNILMIGPTGVGKTEIAR 68 (310)
T ss_dssp CCCCEEEECCTTSSHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 34579999999999999765
No 209
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=84.80 E-value=0.3 Score=41.51 Aligned_cols=17 Identities=29% Similarity=0.612 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 5 ~i~v~G~~~~GKSsli~ 21 (167)
T 1kao_A 5 KVVVLGSGGVGKSALTV 21 (167)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999754
No 210
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=84.79 E-value=0.25 Score=46.53 Aligned_cols=17 Identities=41% Similarity=0.643 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGN 18 (223)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999765
No 211
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=84.76 E-value=0.3 Score=50.76 Aligned_cols=20 Identities=40% Similarity=0.783 Sum_probs=18.0
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|.+++|.|.||+|||||..
T Consensus 214 ~G~~~~lvG~sG~GKSTLln 233 (358)
T 2rcn_A 214 TGRISIFAGQSGVGKSSLLN 233 (358)
T ss_dssp TTSEEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCccHHHHHH
Confidence 57899999999999999865
No 212
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=84.68 E-value=0.27 Score=50.26 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+.|+|++|+|||||..
T Consensus 129 ~~G~i~~I~G~~GsGKTTL~~ 149 (349)
T 1pzn_A 129 ETQAITEVFGEFGSGKTQLAH 149 (349)
T ss_dssp ESSEEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 213
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=84.67 E-value=0.29 Score=49.01 Aligned_cols=19 Identities=42% Similarity=0.579 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
.+.++|+|++|||||+|+.
T Consensus 45 ~~~iLL~GppGtGKT~la~ 63 (322)
T 1xwi_A 45 WRGILLFGPPGTGKSYLAK 63 (322)
T ss_dssp CSEEEEESSSSSCHHHHHH
T ss_pred CceEEEECCCCccHHHHHH
Confidence 4679999999999999764
No 214
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=84.66 E-value=0.29 Score=47.07 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=17.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.+..++|.|.+|+||||++.
T Consensus 22 ~~~~~I~ieG~~GsGKST~~~ 42 (263)
T 1p5z_B 22 TRIKKISIEGNIAAGKSTFVN 42 (263)
T ss_dssp -CCEEEEEECSTTSSHHHHHT
T ss_pred cCceEEEEECCCCCCHHHHHH
Confidence 445679999999999999775
No 215
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=84.59 E-value=0.33 Score=45.76 Aligned_cols=20 Identities=35% Similarity=0.552 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|.+||||||++.
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~ 34 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAP 34 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35679999999999999765
No 216
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=84.58 E-value=0.35 Score=52.79 Aligned_cols=21 Identities=38% Similarity=0.640 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 379 ~~G~~~~ivG~sGsGKSTll~ 399 (598)
T 3qf4_B 379 KPGQKVALVGPTGSGKTTIVN 399 (598)
T ss_dssp CTTCEEEEECCTTSSTTHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 679999999999999999764
No 217
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=84.56 E-value=0.29 Score=53.90 Aligned_cols=20 Identities=40% Similarity=0.808 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
..|+.+.+.|+||+|||||.
T Consensus 42 ~~Ge~~~liGpNGaGKSTLl 61 (670)
T 3ux8_A 42 PRGKLVVLTGLSGSGKSSLA 61 (670)
T ss_dssp ETTSEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHh
Confidence 56899999999999999984
No 218
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=84.56 E-value=0.31 Score=43.03 Aligned_cols=18 Identities=22% Similarity=0.279 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+|||||..
T Consensus 8 ~~i~lvG~~gvGKStL~~ 25 (188)
T 2wjg_A 8 YEIALIGNPNVGKSTIFN 25 (188)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 369999999999999765
No 219
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=84.54 E-value=0.27 Score=49.74 Aligned_cols=43 Identities=26% Similarity=0.310 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHhcccCceeeecccccc-CCCCCEEEEEeCCCCCcccccc
Q 008519 304 MKKGLFSVMHYLMPKRQILSLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 304 mKK~iLTl~n~ll~~~G~LpmHgsanv-~~~G~v~lfFGLSGTGKTTLsa 352 (563)
+++.+...+.-++.... ++ +. ...+++++|.|++|+||||++.
T Consensus 79 ~~~~~~~~l~~~l~~~~--~~----~~~~~~~~vi~ivG~~GsGKTTl~~ 122 (306)
T 1vma_A 79 ALESLKEIILEILNFDT--KL----NVPPEPPFVIMVVGVNGTGKTTSCG 122 (306)
T ss_dssp HHHHHHHHHHHHTCSCC--CC----CCCSSSCEEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC--CC----cccCCCCeEEEEEcCCCChHHHHHH
Confidence 66666665555554322 22 22 2457899999999999999765
No 220
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=84.54 E-value=0.3 Score=53.89 Aligned_cols=20 Identities=40% Similarity=0.574 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
..|..++|.|+||+|||||.
T Consensus 346 ~~Ge~vaIiGpnGsGKSTLl 365 (670)
T 3ux8_A 346 PLGTFVAVTGVSGSGKSTLV 365 (670)
T ss_dssp ETTSEEEEECSTTSSHHHHH
T ss_pred cCCCEEEEEeeCCCCHHHHH
Confidence 56899999999999999976
No 221
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=84.48 E-value=0.32 Score=41.65 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 7 ~i~v~G~~~~GKssl~~ 23 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQ 23 (168)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999765
No 222
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=84.45 E-value=0.32 Score=41.38 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 6 ~i~v~G~~~~GKssl~~ 22 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTL 22 (168)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 223
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=84.29 E-value=0.29 Score=47.27 Aligned_cols=18 Identities=44% Similarity=0.733 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|||||||+.
T Consensus 48 ~~~ll~G~~GtGKt~la~ 65 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAK 65 (311)
T ss_dssp EEEEEESCSSSSHHHHHH
T ss_pred eEEEEECCCCcCHHHHHH
Confidence 369999999999999765
No 224
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=84.29 E-value=0.34 Score=52.47 Aligned_cols=21 Identities=43% Similarity=0.567 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 45 ~~Ge~~~LvG~NGaGKSTLlk 65 (538)
T 1yqt_A 45 KEGMVVGIVGPNGTGKSTAVK 65 (538)
T ss_dssp CTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 225
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=84.29 E-value=0.31 Score=45.58 Aligned_cols=18 Identities=39% Similarity=0.458 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
.++.|.|.||+|||||..
T Consensus 5 ~~i~i~G~sGsGKTTl~~ 22 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLME 22 (169)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 226
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=84.28 E-value=0.34 Score=41.60 Aligned_cols=17 Identities=35% Similarity=0.698 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 4 ki~~vG~~~~GKSsli~ 20 (166)
T 3q72_A 4 KVLLLGAPGVGKSALAR 20 (166)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 227
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=84.27 E-value=0.32 Score=51.05 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|+|+||+|||||..
T Consensus 176 ~~Gei~~I~G~sGsGKTTLl~ 196 (400)
T 3lda_A 176 ETGSITELFGEFRTGKSQLCH 196 (400)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEEcCCCCChHHHHH
Confidence 457899999999999999764
No 228
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=84.25 E-value=0.33 Score=41.39 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++++|++|+|||||..
T Consensus 3 ki~v~G~~~~GKSsli~ 19 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFN 19 (161)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 229
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=84.23 E-value=0.34 Score=50.58 Aligned_cols=21 Identities=38% Similarity=0.415 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|++|||||||..
T Consensus 167 ~~~~~i~l~G~~GsGKSTl~~ 187 (377)
T 1svm_A 167 PKKRYWLFKGPIDSGKTTLAA 187 (377)
T ss_dssp TTCCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 567899999999999999765
No 230
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=84.23 E-value=0.33 Score=41.50 Aligned_cols=17 Identities=18% Similarity=0.425 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 5 ~i~v~G~~~~GKssli~ 21 (170)
T 1ek0_A 5 KLVLLGEAAVGKSSIVL 21 (170)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999764
No 231
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=84.17 E-value=0.18 Score=51.25 Aligned_cols=21 Identities=33% Similarity=0.545 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|++++|.|.||+|||||..
T Consensus 171 ~~G~~~~lvG~sG~GKSTLln 191 (307)
T 1t9h_A 171 FQDKTTVFAGQSGVGKSSLLN 191 (307)
T ss_dssp GTTSEEEEEESHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 358999999999999999865
No 232
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=84.16 E-value=0.23 Score=54.06 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|.+++|.|+|||||||++.
T Consensus 393 ~~~~~I~l~GlsGsGKSTIa~ 413 (511)
T 1g8f_A 393 KQGFSIVLGNSLTVSREQLSI 413 (511)
T ss_dssp GCCEEEEECTTCCSCHHHHHH
T ss_pred ccceEEEecccCCCCHHHHHH
Confidence 467789999999999999875
No 233
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=84.08 E-value=0.3 Score=46.69 Aligned_cols=18 Identities=17% Similarity=0.194 Sum_probs=16.0
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|.+||||||++.
T Consensus 23 ~iI~I~G~~GSGKST~a~ 40 (252)
T 1uj2_A 23 FLIGVSGGTASGKSSVCA 40 (252)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 369999999999999876
No 234
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=84.07 E-value=0.29 Score=49.99 Aligned_cols=17 Identities=29% Similarity=0.298 Sum_probs=15.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
++.|.|+||+|||||+.
T Consensus 94 iigI~GpsGSGKSTl~~ 110 (321)
T 3tqc_A 94 IIGIAGSVAVGKSTTSR 110 (321)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 69999999999999765
No 235
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=84.06 E-value=0.34 Score=41.43 Aligned_cols=17 Identities=29% Similarity=0.587 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 5 ki~v~G~~~~GKssli~ 21 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTV 21 (167)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999764
No 236
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=84.01 E-value=0.36 Score=52.47 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=22.3
Q ss_pred eeccccccCCCCCEEEEEeCCCCCcccccc
Q 008519 323 SLHSGCNMGKDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 323 pmHgsanv~~~G~v~lfFGLSGTGKTTLsa 352 (563)
-+|+ ..+-+.|.++.+.|++|+|||||..
T Consensus 15 ~l~~-l~~~~~Gei~gLiGpNGaGKSTLlk 43 (538)
T 3ozx_A 15 KLFG-LPTPKNNTILGVLGKNGVGKTTVLK 43 (538)
T ss_dssp EEEC-CCCCCTTEEEEEECCTTSSHHHHHH
T ss_pred eecC-CCCCCCCCEEEEECCCCCcHHHHHH
Confidence 3444 3344679999999999999999664
No 237
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=83.85 E-value=0.14 Score=48.75 Aligned_cols=18 Identities=44% Similarity=0.619 Sum_probs=15.5
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|||||+|+.
T Consensus 45 ~~vll~G~~GtGKT~la~ 62 (268)
T 2r62_A 45 KGVLLVGPPGTGKTLLAK 62 (268)
T ss_dssp SCCCCBCSSCSSHHHHHH
T ss_pred ceEEEECCCCCcHHHHHH
Confidence 348999999999999774
No 238
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=83.83 E-value=0.34 Score=47.87 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||+|+.
T Consensus 37 ~~lLl~GppGtGKT~la~ 54 (293)
T 3t15_A 37 LILGIWGGKGQGKSFQCE 54 (293)
T ss_dssp SEEEEEECTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 568999999999999775
No 239
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=83.83 E-value=0.37 Score=41.32 Aligned_cols=17 Identities=41% Similarity=0.561 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 5 ~i~v~G~~~~GKssli~ 21 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLV 21 (170)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999764
No 240
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=83.81 E-value=0.35 Score=41.97 Aligned_cols=17 Identities=41% Similarity=0.622 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 10 ~i~v~G~~~~GKSsli~ 26 (182)
T 1ky3_A 10 KVIILGDSGVGKTSLMH 26 (182)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 241
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=83.80 E-value=0.35 Score=41.65 Aligned_cols=17 Identities=41% Similarity=0.661 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 4 ki~ivG~~~~GKSsli~ 20 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAG 20 (169)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999765
No 242
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=83.79 E-value=0.28 Score=49.38 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|||||+++.
T Consensus 50 ~~~~vll~GppGtGKT~la~ 69 (363)
T 3hws_A 50 GKSNILLIGPTGSGKTLLAE 69 (363)
T ss_dssp CCCCEEEECCTTSSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHH
Confidence 45679999999999999775
No 243
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=83.76 E-value=0.32 Score=43.97 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=15.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
++.|.|.+|+||||++.
T Consensus 4 ~i~i~G~~GsGKst~~~ 20 (208)
T 3ake_A 4 IVTIDGPSASGKSSVAR 20 (208)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 78999999999999775
No 244
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=83.71 E-value=0.36 Score=50.37 Aligned_cols=20 Identities=30% Similarity=0.610 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
....+++.|+||+||||++.
T Consensus 257 ~~~lIil~G~pGSGKSTla~ 276 (416)
T 3zvl_A 257 NPEVVVAVGFPGAGKSTFIQ 276 (416)
T ss_dssp SCCEEEEESCTTSSHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHH
Confidence 35689999999999999876
No 245
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=83.64 E-value=0.38 Score=41.72 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|.+|+|||||..
T Consensus 10 ~~i~v~G~~~~GKssli~ 27 (181)
T 2fn4_A 10 HKLVVVGGGGVGKSALTI 27 (181)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999764
No 246
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=83.63 E-value=0.34 Score=51.74 Aligned_cols=21 Identities=43% Similarity=0.509 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|+||+|||||..
T Consensus 136 ~~Ge~v~IvGpnGsGKSTLlr 156 (460)
T 2npi_A 136 FEGPRVVIVGGSQTGKTSLSR 156 (460)
T ss_dssp SSCCCEEEEESTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999765
No 247
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=83.63 E-value=0.36 Score=41.54 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 8 ~i~v~G~~~~GKssli~ 24 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLVL 24 (170)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 248
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=83.62 E-value=0.35 Score=42.94 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|+|||||..
T Consensus 48 ~~~i~vvG~~g~GKSsll~ 66 (193)
T 2ged_A 48 QPSIIIAGPQNSGKTSLLT 66 (193)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3479999999999999765
No 249
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=83.55 E-value=0.36 Score=41.70 Aligned_cols=17 Identities=35% Similarity=0.665 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 6 ki~i~G~~~vGKSsl~~ 22 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLAS 22 (175)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCccHHHHHH
Confidence 58999999999999765
No 250
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=83.49 E-value=0.33 Score=48.55 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|+|++|||||+|+.
T Consensus 152 ~~~lll~G~~GtGKT~La~ 170 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLA 170 (308)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 5689999999999999875
No 251
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=83.48 E-value=0.39 Score=53.14 Aligned_cols=21 Identities=33% Similarity=0.512 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+.+.|+||+|||||..
T Consensus 101 ~~Gei~~LvGpNGaGKSTLLk 121 (608)
T 3j16_B 101 RPGQVLGLVGTNGIGKSTALK 121 (608)
T ss_dssp CTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 579999999999999999654
No 252
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=83.41 E-value=0.28 Score=48.24 Aligned_cols=20 Identities=45% Similarity=0.791 Sum_probs=17.0
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+..++|.|++|||||||..
T Consensus 43 ~~~~vll~G~~G~GKT~l~~ 62 (387)
T 2v1u_A 43 KPSNALLYGLTGTGKTAVAR 62 (387)
T ss_dssp CCCCEEECBCTTSSHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHH
Confidence 35679999999999999765
No 253
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=83.40 E-value=0.31 Score=48.48 Aligned_cols=16 Identities=50% Similarity=0.821 Sum_probs=14.5
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++||||||+..
T Consensus 49 ~ll~Gp~G~GKTtla~ 64 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIV 64 (340)
T ss_dssp EEEECSSSSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 254
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=83.34 E-value=0.36 Score=49.86 Aligned_cols=19 Identities=32% Similarity=0.489 Sum_probs=16.1
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++|+|||||..
T Consensus 123 ~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 123 RGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp SEEEEEECSTTSCHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3489999999999999665
No 255
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=83.32 E-value=0.51 Score=54.31 Aligned_cols=35 Identities=20% Similarity=0.367 Sum_probs=25.7
Q ss_pred Cceeeeccc-cccC-------CCCCEEEEEeCCCCCccccccc
Q 008519 319 RQILSLHSG-CNMG-------KDGDVALFFGLSGTGKTTLSTD 353 (563)
Q Consensus 319 ~G~LpmHgs-anv~-------~~G~v~lfFGLSGTGKTTLsad 353 (563)
++++-++|+ .+-. +-++-++|.|+||+|||||..|
T Consensus 13 ~~~I~i~gar~hNLkni~v~iP~~~l~viTGvSGSGKSSLafd 55 (842)
T 2vf7_A 13 GGFVQVRGARQHNLKDISVKVPRDALVVFTGVSGSGKSSLAFG 55 (842)
T ss_dssp TTEEEEEEECSTTCCSEEEEEESSSEEEEESSTTSSHHHHHTT
T ss_pred CCeEEEeeccccCCCCeeEEecCCCEEEEECCCCCCHHHHHHH
Confidence 346677775 2222 4578899999999999999874
No 256
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=83.30 E-value=0.39 Score=51.34 Aligned_cols=21 Identities=48% Similarity=0.540 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||||||||..
T Consensus 37 ~~Ge~~~l~G~nGsGKSTL~~ 57 (525)
T 1tf7_A 37 PIGRSTLVSGTSGTGKTLFSI 57 (525)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEEcCCCCCHHHHHH
Confidence 468899999999999999654
No 257
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=83.29 E-value=0.4 Score=52.24 Aligned_cols=21 Identities=38% Similarity=0.678 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 367 ~~Ge~~~ivG~sGsGKSTll~ 387 (587)
T 3qf4_A 367 KPGSLVAVLGETGSGKSTLMN 387 (587)
T ss_dssp CTTCEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999765
No 258
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=83.28 E-value=0.34 Score=47.40 Aligned_cols=19 Identities=37% Similarity=0.447 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|+||+||||++.
T Consensus 9 ~~~i~i~G~~GsGKsTla~ 27 (233)
T 3r20_A 9 SLVVAVDGPAGTGKSSVSR 27 (233)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3579999999999999875
No 259
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=83.27 E-value=0.41 Score=47.28 Aligned_cols=17 Identities=41% Similarity=0.505 Sum_probs=15.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|||||||..
T Consensus 46 ~~li~G~~G~GKTtl~~ 62 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLR 62 (389)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 79999999999999764
No 260
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=83.15 E-value=0.4 Score=48.06 Aligned_cols=17 Identities=53% Similarity=0.745 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
++++.|.||+|||||..
T Consensus 6 v~~i~G~~GaGKTTll~ 22 (318)
T 1nij_A 6 VTLLTGFLGAGKTTLLR 22 (318)
T ss_dssp EEEEEESSSSSCHHHHH
T ss_pred EEEEEecCCCCHHHHHH
Confidence 68999999999999654
No 261
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=83.11 E-value=0.39 Score=41.15 Aligned_cols=17 Identities=41% Similarity=0.563 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 2 ki~~~G~~~~GKssl~~ 18 (164)
T 1r8s_A 2 RILMVGLDAAGKTTILY 18 (164)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47999999999999765
No 262
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=83.10 E-value=0.4 Score=42.21 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|+|||||..
T Consensus 24 ~~i~v~G~~~~GKSsli~ 41 (195)
T 3pqc_A 24 GEVAFVGRSNVGKSSLLN 41 (195)
T ss_dssp CEEEEEEBTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 263
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=83.07 E-value=0.39 Score=41.12 Aligned_cols=17 Identities=35% Similarity=0.606 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 5 ~i~v~G~~~~GKssli~ 21 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVL 21 (172)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999764
No 264
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=82.84 E-value=0.43 Score=50.85 Aligned_cols=21 Identities=38% Similarity=0.518 Sum_probs=17.7
Q ss_pred CCCCE--EEEEeCCCCCcccccc
Q 008519 332 KDGDV--ALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v--~lfFGLSGTGKTTLsa 352 (563)
+.|.. ++|.|.||+|||||..
T Consensus 38 ~~Gei~~vaLvG~nGaGKSTLln 60 (427)
T 2qag_B 38 SQGFCFNILCVGETGLGKSTLMD 60 (427)
T ss_dssp C-CCEEEEEEECSTTSSSHHHHH
T ss_pred cCCCeeEEEEECCCCCCHHHHHH
Confidence 56777 9999999999999765
No 265
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=82.84 E-value=0.41 Score=40.92 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 8 ~i~v~G~~~~GKssli~ 24 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVL 24 (170)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999764
No 266
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=82.81 E-value=0.4 Score=41.61 Aligned_cols=17 Identities=29% Similarity=0.602 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 9 ~i~v~G~~~~GKSsli~ 25 (177)
T 1wms_A 9 KVILLGDGGVGKSSLMN 25 (177)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999765
No 267
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=82.76 E-value=0.34 Score=47.81 Aligned_cols=16 Identities=44% Similarity=0.706 Sum_probs=14.6
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++|||||||..
T Consensus 39 ~ll~Gp~G~GKTtl~~ 54 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCM 54 (354)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 268
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=82.65 E-value=0.42 Score=41.15 Aligned_cols=18 Identities=44% Similarity=0.613 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|+|||||..
T Consensus 8 ~~i~v~G~~~~GKssl~~ 25 (171)
T 1upt_A 8 MRILILGLDGAGKTTILY 25 (171)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 269
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=82.56 E-value=0.39 Score=51.95 Aligned_cols=20 Identities=35% Similarity=0.614 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|+|++|||||||..
T Consensus 107 ~g~~vll~Gp~GtGKTtlar 126 (543)
T 3m6a_A 107 KGPILCLAGPPGVGKTSLAK 126 (543)
T ss_dssp CSCEEEEESSSSSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 47789999999999999764
No 270
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=82.51 E-value=0.45 Score=41.16 Aligned_cols=17 Identities=41% Similarity=0.604 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 16 ~i~v~G~~~~GKssli~ 32 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLIT 32 (179)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 271
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=82.41 E-value=0.37 Score=45.91 Aligned_cols=19 Identities=32% Similarity=0.552 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+|||||+|+.
T Consensus 29 ~~~vll~G~~GtGKt~la~ 47 (265)
T 2bjv_A 29 DKPVLIIGERGTGKELIAS 47 (265)
T ss_dssp CSCEEEECCTTSCHHHHHH
T ss_pred CCCEEEECCCCCcHHHHHH
Confidence 3578999999999999764
No 272
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=82.37 E-value=0.43 Score=41.73 Aligned_cols=17 Identities=41% Similarity=0.446 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 13 ki~v~G~~~~GKSsli~ 29 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLY 29 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 273
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=82.34 E-value=0.41 Score=52.06 Aligned_cols=21 Identities=38% Similarity=0.714 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.+.|+||+|||||..
T Consensus 292 ~~Gei~~i~G~nGsGKSTLl~ 312 (538)
T 3ozx_A 292 KEGEIIGILGPNGIGKTTFAR 312 (538)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999764
No 274
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=82.20 E-value=0.44 Score=40.83 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 8 ~i~v~G~~~~GKSsli~ 24 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMW 24 (170)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 275
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=82.19 E-value=0.37 Score=47.45 Aligned_cols=18 Identities=56% Similarity=0.763 Sum_probs=15.6
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|||||+|+.
T Consensus 56 ~~vll~G~~GtGKT~la~ 73 (338)
T 3pfi_A 56 DHILFSGPAGLGKTTLAN 73 (338)
T ss_dssp CCEEEECSTTSSHHHHHH
T ss_pred CeEEEECcCCCCHHHHHH
Confidence 358999999999999765
No 276
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=82.12 E-value=0.44 Score=41.27 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 11 ~i~v~G~~~~GKssl~~ 27 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLL 27 (181)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 277
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=82.08 E-value=0.41 Score=45.28 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+|+||||++.
T Consensus 2 ~~~i~~~G~~g~GKtt~~~ 20 (241)
T 2ocp_A 2 PRRLSIEGNIAVGKSTFVK 20 (241)
T ss_dssp CEEEEEEECTTSSHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHH
Confidence 4568999999999999765
No 278
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=82.07 E-value=0.41 Score=47.09 Aligned_cols=18 Identities=33% Similarity=0.560 Sum_probs=16.0
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|.+||||||++.
T Consensus 76 ~iI~I~G~~GSGKSTva~ 93 (281)
T 2f6r_A 76 YVLGLTGISGSGKSSVAQ 93 (281)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 479999999999999765
No 279
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=82.06 E-value=0.49 Score=44.68 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+..++|.|.+|+||||++.
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~ 34 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAK 34 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 346789999999999999765
No 280
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=82.02 E-value=0.45 Score=42.15 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 23 ki~vvG~~~~GKSsli~ 39 (190)
T 3con_A 23 KLVVVGAGGVGKSALTI 39 (190)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 281
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=81.94 E-value=0.47 Score=41.69 Aligned_cols=17 Identities=41% Similarity=0.546 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 3 ki~v~G~~~~GKSsli~ 19 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIY 19 (190)
T ss_dssp EEEEEEBTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999765
No 282
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=81.93 E-value=0.48 Score=52.29 Aligned_cols=21 Identities=52% Similarity=0.615 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|+||+|||||..
T Consensus 115 ~~Ge~~~LiG~NGsGKSTLlk 135 (607)
T 3bk7_A 115 KDGMVVGIVGPNGTGKTTAVK 135 (607)
T ss_dssp CTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999764
No 283
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=81.87 E-value=0.46 Score=41.59 Aligned_cols=17 Identities=29% Similarity=0.558 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 6 ki~v~G~~~~GKSsli~ 22 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTI 22 (189)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999764
No 284
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=81.84 E-value=0.44 Score=41.75 Aligned_cols=19 Identities=42% Similarity=0.550 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|+|||||..
T Consensus 18 ~~~i~v~G~~~~GKssli~ 36 (183)
T 1moz_A 18 ELRILILGLDGAGKTTILY 36 (183)
T ss_dssp CEEEEEEEETTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 4479999999999999765
No 285
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=81.81 E-value=0.49 Score=47.95 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=17.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
...+.++|+|++|||||+|+.
T Consensus 115 ~~~~~vLl~GppGtGKT~la~ 135 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIGK 135 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHH
Confidence 345689999999999999764
No 286
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=81.77 E-value=0.53 Score=46.60 Aligned_cols=19 Identities=53% Similarity=0.728 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|++|||||||..
T Consensus 45 ~~~vll~G~~G~GKT~la~ 63 (384)
T 2qby_B 45 KFSNLFLGLTGTGKTFVSK 63 (384)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHH
Confidence 4579999999999999765
No 287
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=81.72 E-value=0.47 Score=41.31 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 20 ki~v~G~~~~GKSsli~ 36 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTL 36 (187)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 288
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=81.48 E-value=0.44 Score=45.95 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=17.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+..++++|+|+.|+||+|++.
T Consensus 27 ~k~kiI~llGpPGsGKgTqa~ 47 (217)
T 3umf_A 27 AKAKVIFVLGGPGSGKGTQCE 47 (217)
T ss_dssp TSCEEEEEECCTTCCHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 445789999999999999765
No 289
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=81.42 E-value=0.37 Score=47.23 Aligned_cols=16 Identities=50% Similarity=0.711 Sum_probs=14.7
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++|||||+|+.
T Consensus 48 vLl~G~~GtGKT~la~ 63 (350)
T 1g8p_A 48 VLVFGDRGTGKSTAVR 63 (350)
T ss_dssp EEEECCGGGCTTHHHH
T ss_pred EEEECCCCccHHHHHH
Confidence 8999999999999764
No 290
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=81.39 E-value=0.49 Score=42.26 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 16 ki~v~G~~~~GKSsli~ 32 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTL 32 (206)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 291
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=81.37 E-value=0.48 Score=43.76 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|.+|+|||+|+.
T Consensus 28 ~~G~l~~i~G~pG~GKT~l~l 48 (251)
T 2zts_A 28 PEGTTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHH
Confidence 347899999999999999764
No 292
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=81.36 E-value=0.48 Score=42.62 Aligned_cols=17 Identities=24% Similarity=0.259 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 22 ki~ivG~~~vGKSsL~~ 38 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVH 38 (184)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 293
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=81.33 E-value=0.46 Score=49.28 Aligned_cols=20 Identities=35% Similarity=0.649 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.++.+++.|++|+|||||+.
T Consensus 39 ~~~lIvI~GPTgsGKTtLa~ 58 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSI 58 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 45689999999999999876
No 294
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=81.33 E-value=0.5 Score=41.89 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-..++++|.+|+|||||..
T Consensus 23 ~~~i~v~G~~~~GKSsli~ 41 (195)
T 1svi_A 23 LPEIALAGRSNVGKSSFIN 41 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3569999999999999765
No 295
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=81.26 E-value=0.5 Score=41.12 Aligned_cols=17 Identities=41% Similarity=0.558 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 12 ~i~v~G~~~~GKssli~ 28 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLV 28 (180)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 296
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=81.22 E-value=0.5 Score=41.05 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 8 ki~v~G~~~~GKssl~~ 24 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTT 24 (178)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 297
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=81.19 E-value=0.51 Score=41.20 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 7 ~i~~~G~~~~GKssl~~ 23 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLI 23 (186)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999763
No 298
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=81.17 E-value=0.53 Score=41.23 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 8 ki~~~G~~~~GKSsli~ 24 (181)
T 3t5g_A 8 KIAILGYRSVGKSSLTI 24 (181)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999754
No 299
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=81.12 E-value=0.38 Score=46.72 Aligned_cols=19 Identities=47% Similarity=0.662 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|++|||||+|+.
T Consensus 38 ~~~vll~G~~GtGKT~la~ 56 (324)
T 1hqc_A 38 LEHLLLFGPPGLGKTTLAH 56 (324)
T ss_dssp CCCCEEECCTTCCCHHHHH
T ss_pred CCcEEEECCCCCCHHHHHH
Confidence 3569999999999999765
No 300
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=81.12 E-value=0.51 Score=40.78 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 17 ~i~v~G~~~~GKSsli~ 33 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLH 33 (179)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 301
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=81.06 E-value=0.56 Score=41.16 Aligned_cols=17 Identities=41% Similarity=0.487 Sum_probs=9.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 10 ki~v~G~~~~GKssl~~ 26 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLF 26 (183)
T ss_dssp EEEEECCCCC-------
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 302
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=80.96 E-value=0.54 Score=41.95 Aligned_cols=18 Identities=44% Similarity=0.578 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+|||||..
T Consensus 17 ~ki~ivG~~~vGKSsL~~ 34 (181)
T 1fzq_A 17 VRILLLGLDNAGKTTLLK 34 (181)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 303
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=80.91 E-value=0.44 Score=48.32 Aligned_cols=21 Identities=33% Similarity=0.534 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+++++|.|++|+||||+++
T Consensus 103 ~~~~vI~ivG~~G~GKTT~~~ 123 (320)
T 1zu4_A 103 NRLNIFMLVGVNGTGKTTSLA 123 (320)
T ss_dssp TSCEEEEEESSTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 304
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=80.91 E-value=0.46 Score=45.36 Aligned_cols=20 Identities=30% Similarity=0.366 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+||||++.
T Consensus 5 ~g~~i~~eG~~gsGKsT~~~ 24 (213)
T 4edh_A 5 TGLFVTLEGPEGAGKSTNRD 24 (213)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred CceEEEEEcCCCCCHHHHHH
Confidence 36679999999999999765
No 305
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=80.90 E-value=0.52 Score=41.07 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 14 ki~v~G~~~~GKSsli~ 30 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVL 30 (181)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999754
No 306
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=80.88 E-value=0.53 Score=45.02 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|.-++|.|++|+||||++.
T Consensus 3 g~~i~~eG~~gsGKsT~~~ 21 (213)
T 4tmk_A 3 SKYIVIEGLEGAGKTTARN 21 (213)
T ss_dssp CCEEEEEECTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 6789999999999999765
No 307
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=80.83 E-value=0.49 Score=49.59 Aligned_cols=19 Identities=47% Similarity=0.714 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|+|++|||||+|+.
T Consensus 63 ~~~iLl~GppGtGKT~la~ 81 (456)
T 2c9o_A 63 GRAVLLAGPPGTGKTALAL 81 (456)
T ss_dssp TCEEEEECCTTSSHHHHHH
T ss_pred CCeEEEECCCcCCHHHHHH
Confidence 4569999999999999775
No 308
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=80.77 E-value=0.53 Score=41.38 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 16 ki~vvG~~~~GKssL~~ 32 (198)
T 3t1o_A 16 KIVYYGPGLSGKTTNLK 32 (198)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 309
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=80.76 E-value=0.56 Score=41.16 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 12 ki~v~G~~~~GKSsli~ 28 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLH 28 (186)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 310
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=80.65 E-value=0.52 Score=45.71 Aligned_cols=20 Identities=40% Similarity=0.597 Sum_probs=14.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+||||++.
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~ 43 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQ 43 (227)
T ss_dssp CCCEEEEECCC---CHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 47789999999999999765
No 311
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=80.63 E-value=0.56 Score=51.88 Aligned_cols=21 Identities=43% Similarity=0.726 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+||+|||||..
T Consensus 376 ~~GEiv~iiG~NGsGKSTLlk 396 (608)
T 3j16_B 376 SDSEILVMMGENGTGKTTLIK 396 (608)
T ss_dssp CTTCEEEEESCTTSSHHHHHH
T ss_pred ccceEEEEECCCCCcHHHHHH
Confidence 457899999999999999764
No 312
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=80.60 E-value=0.54 Score=41.24 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 20 ki~v~G~~~~GKSsl~~ 36 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTI 36 (183)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 313
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=80.57 E-value=0.44 Score=48.06 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=16.8
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
....++|.|++|||||+|+.
T Consensus 71 ~~~~ill~Gp~GtGKT~la~ 90 (376)
T 1um8_A 71 SKSNILLIGPTGSGKTLMAQ 90 (376)
T ss_dssp CCCCEEEECCTTSSHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHH
Confidence 34569999999999999764
No 314
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=80.57 E-value=0.53 Score=41.90 Aligned_cols=17 Identities=41% Similarity=0.628 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 27 ki~v~G~~~~GKSsLi~ 43 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLS 43 (193)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 315
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=80.43 E-value=0.56 Score=45.73 Aligned_cols=19 Identities=32% Similarity=0.492 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++|+||||++.
T Consensus 27 ~~~i~~eG~~GsGKsT~~~ 45 (236)
T 3lv8_A 27 AKFIVIEGLEGAGKSTAIQ 45 (236)
T ss_dssp CCEEEEEESTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 5679999999999999765
No 316
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=80.36 E-value=0.55 Score=41.68 Aligned_cols=18 Identities=33% Similarity=0.492 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|+|||||..
T Consensus 18 ~ki~v~G~~~~GKSsl~~ 35 (199)
T 4bas_A 18 LQVVMCGLDNSGKTTIIN 35 (199)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 317
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=80.35 E-value=0.56 Score=40.88 Aligned_cols=18 Identities=28% Similarity=0.211 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|.+|+|||||..
T Consensus 9 ~ki~v~G~~~~GKssl~~ 26 (182)
T 3bwd_D 9 IKCVTVGDGAVGKTCLLI 26 (182)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 469999999999999764
No 318
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.21 E-value=0.5 Score=50.35 Aligned_cols=19 Identities=47% Similarity=0.674 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-+.++|+|++|||||.|+.
T Consensus 215 prGvLLyGPPGTGKTllAk 233 (434)
T 4b4t_M 215 PKGALMYGPPGTGKTLLAR 233 (434)
T ss_dssp CCEEEEESCTTSSHHHHHH
T ss_pred CCeeEEECcCCCCHHHHHH
Confidence 4679999999999999764
No 319
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=80.05 E-value=0.61 Score=54.13 Aligned_cols=22 Identities=32% Similarity=0.655 Sum_probs=19.2
Q ss_pred CCCCEEEEEeCCCCCccccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLSTD 353 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsad 353 (563)
+.++-++|.|+||+|||+|+.|
T Consensus 22 p~~~l~v~tG~SGSGKSsLafd 43 (916)
T 3pih_A 22 PKNRLVVITGVSGSGKSSLAMD 43 (916)
T ss_dssp ETTSEEEEEESTTSSSHHHHTT
T ss_pred CCCcEEEEECCCCCcHHHHHHH
Confidence 4578899999999999999874
No 320
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=80.05 E-value=0.57 Score=50.77 Aligned_cols=21 Identities=43% Similarity=0.626 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 310 ~~Ge~~~i~G~NGsGKSTLlk 330 (538)
T 1yqt_A 310 KKGEVIGIVGPNGIGKTTFVK 330 (538)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999764
No 321
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=80.04 E-value=0.55 Score=49.57 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=16.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+|||||..
T Consensus 166 ~ggii~I~GpnGSGKTTlL~ 185 (418)
T 1p9r_A 166 PHGIILVTGPTGSGKSTTLY 185 (418)
T ss_dssp SSEEEEEECSTTSCHHHHHH
T ss_pred cCCeEEEECCCCCCHHHHHH
Confidence 34578999999999999655
No 322
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=80.04 E-value=0.66 Score=44.66 Aligned_cols=20 Identities=45% Similarity=0.589 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|++|+||||++.
T Consensus 4 ~g~~i~~eG~~g~GKst~~~ 23 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCN 23 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 47789999999999999765
No 323
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=79.98 E-value=0.55 Score=51.48 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.+..++|.|+||+||||++.
T Consensus 394 q~~~~I~l~GlsGSGKSTiA~ 414 (573)
T 1m8p_A 394 TQGFTIFLTGYMNSGKDAIAR 414 (573)
T ss_dssp TCCEEEEEECSTTSSHHHHHH
T ss_pred ccceEEEeecCCCCCHHHHHH
Confidence 345689999999999999775
No 324
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=79.92 E-value=0.58 Score=42.57 Aligned_cols=17 Identities=41% Similarity=0.661 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 25 ki~vvG~~~vGKSsLi~ 41 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAG 41 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 325
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=79.89 E-value=0.59 Score=40.93 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 9 ki~v~G~~~~GKSsli~ 25 (208)
T 3clv_A 9 KTVLLGESSVGKSSIVL 25 (208)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 326
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=79.86 E-value=0.55 Score=42.73 Aligned_cols=18 Identities=44% Similarity=0.676 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++++|++|+|||||..
T Consensus 26 ~ki~lvG~~~vGKSsLi~ 43 (198)
T 1f6b_A 26 GKLVFLGLDNAGKTTLLH 43 (198)
T ss_dssp EEEEEEEETTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 368999999999999765
No 327
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=79.82 E-value=0.57 Score=43.99 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 31 ~i~lvG~~g~GKStlin 47 (239)
T 3lxx_A 31 RIVLVGKTGAGKSATGN 47 (239)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 328
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=79.74 E-value=0.6 Score=41.32 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 18 ki~v~G~~~~GKSsli~ 34 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLL 34 (196)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 329
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=79.65 E-value=0.5 Score=48.01 Aligned_cols=19 Identities=37% Similarity=0.611 Sum_probs=16.2
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|||||+|+.
T Consensus 84 ~~~iLL~GppGtGKT~la~ 102 (355)
T 2qp9_X 84 TSGILLYGPPGTGKSYLAK 102 (355)
T ss_dssp CCCEEEECSTTSCHHHHHH
T ss_pred CceEEEECCCCCcHHHHHH
Confidence 3469999999999999874
No 330
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=79.63 E-value=0.6 Score=41.51 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 22 ki~v~G~~~~GKSsli~ 38 (189)
T 1z06_A 22 KIIVIGDSNVGKTCLTY 38 (189)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 331
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=79.61 E-value=0.51 Score=46.19 Aligned_cols=16 Identities=50% Similarity=0.804 Sum_probs=14.6
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++|||||||..
T Consensus 61 ~ll~G~~G~GKT~la~ 76 (353)
T 1sxj_D 61 MLFYGPPGTGKTSTIL 76 (353)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 332
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=79.59 E-value=0.63 Score=41.40 Aligned_cols=18 Identities=39% Similarity=0.551 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 22 ~ki~v~G~~~~GKSsli~ 39 (190)
T 2h57_A 22 VHVLCLGLDNSGKTTIIN 39 (190)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 333
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=79.54 E-value=0.64 Score=41.25 Aligned_cols=17 Identities=35% Similarity=0.341 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 9 ki~v~G~~~vGKSsli~ 25 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLH 25 (184)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999765
No 334
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=79.53 E-value=0.58 Score=47.67 Aligned_cols=20 Identities=40% Similarity=0.612 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
....++|+|++|||||+|+.
T Consensus 147 ~~~~vLL~GppGtGKT~la~ 166 (389)
T 3vfd_A 147 PARGLLLFGPPGNGKTMLAK 166 (389)
T ss_dssp CCSEEEEESSTTSCHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 45789999999999999765
No 335
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=79.52 E-value=0.59 Score=49.96 Aligned_cols=21 Identities=38% Similarity=0.494 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 279 ~~G~i~~i~G~~GsGKSTLl~ 299 (525)
T 1tf7_A 279 FKDSIILATGATGTGKTLLVS 299 (525)
T ss_dssp ESSCEEEEEECTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 457899999999999999765
No 336
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=79.42 E-value=0.77 Score=41.37 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 35 ki~vvG~~~~GKSsli~ 51 (199)
T 3l0i_B 35 KLLLIGDSGVGKSCLLL 51 (199)
T ss_dssp EEEEECCTTSCCTTTTT
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999865
No 337
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=79.40 E-value=0.6 Score=47.41 Aligned_cols=21 Identities=24% Similarity=0.223 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+.|.|.+|+|||||..
T Consensus 53 ~~g~~v~i~G~~GaGKSTLl~ 73 (337)
T 2qm8_A 53 GRAIRVGITGVPGVGKSTTID 73 (337)
T ss_dssp CCSEEEEEECCTTSCHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 467889999999999999765
No 338
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=79.33 E-value=0.57 Score=43.95 Aligned_cols=18 Identities=39% Similarity=0.381 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+.+.|.+||||||++.
T Consensus 13 ~iIgltG~~GSGKSTva~ 30 (192)
T 2grj_A 13 MVIGVTGKIGTGKSTVCE 30 (192)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 369999999999999776
No 339
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=79.31 E-value=0.56 Score=50.74 Aligned_cols=19 Identities=42% Similarity=0.583 Sum_probs=17.1
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|||.||+|||||..
T Consensus 151 Gq~~~i~G~sGvGKTtL~~ 169 (473)
T 1sky_E 151 GGKIGLFGGAGVGKTVLIQ 169 (473)
T ss_dssp TCEEEEECCSSSCHHHHHH
T ss_pred CCEEEEECCCCCCccHHHH
Confidence 5689999999999999876
No 340
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=79.30 E-value=0.66 Score=41.43 Aligned_cols=17 Identities=35% Similarity=0.409 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 25 ki~v~G~~~~GKSsli~ 41 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLF 41 (191)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 49999999999999765
No 341
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=79.23 E-value=0.66 Score=41.14 Aligned_cols=18 Identities=33% Similarity=0.577 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 9 ~ki~vvG~~~~GKSsli~ 26 (199)
T 2gf0_A 9 YRVVVFGAGGVGKSSLVL 26 (199)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred eEEEEECCCCCcHHHHHH
Confidence 369999999999999754
No 342
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=79.22 E-value=0.58 Score=44.48 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|+.|+||+|++.
T Consensus 2 ~Iil~GpPGsGKgTqa~ 18 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAK 18 (206)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999765
No 343
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=79.17 E-value=0.37 Score=47.47 Aligned_cols=19 Identities=32% Similarity=0.394 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|.|++|||||+|+.
T Consensus 46 ~~~vll~G~pGtGKT~la~ 64 (331)
T 2r44_A 46 GGHILLEGVPGLAKTLSVN 64 (331)
T ss_dssp TCCEEEESCCCHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 4579999999999999764
No 344
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=79.15 E-value=0.54 Score=48.54 Aligned_cols=19 Identities=26% Similarity=0.372 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|+||+|||||+.
T Consensus 3 ~~~i~i~GptgsGKt~la~ 21 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSV 21 (322)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEECCCcCCHHHHHH
Confidence 3578999999999999876
No 345
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=79.05 E-value=0.59 Score=46.62 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|+||+|||||..
T Consensus 20 ~I~lvG~nG~GKSTLl~ 36 (301)
T 2qnr_A 20 TLMVVGESGLGKSTLIN 36 (301)
T ss_dssp EEEEEEETTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47999999999999765
No 346
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=79.00 E-value=0.64 Score=51.32 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 380 ~~Gei~~i~G~NGsGKSTLlk 400 (607)
T 3bk7_A 380 RKGEVIGIVGPNGIGKTTFVK 400 (607)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999765
No 347
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=78.98 E-value=0.66 Score=40.94 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|+|||||..
T Consensus 18 ~~~i~v~G~~~~GKssl~~ 36 (186)
T 1ksh_A 18 ELRLLMLGLDNAGKTTILK 36 (186)
T ss_dssp CEEEEEECSTTSSHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 348
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=78.88 E-value=0.6 Score=50.49 Aligned_cols=21 Identities=29% Similarity=0.313 Sum_probs=17.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|.|++|+|||||..
T Consensus 258 ~~g~~i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 258 EHKFSAIVVGETASGKTTTLN 278 (511)
T ss_dssp HTTCCEEEEESTTSSHHHHHH
T ss_pred hCCCEEEEECCCCCCHHHHHH
Confidence 356679999999999999654
No 349
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=78.86 E-value=0.65 Score=41.63 Aligned_cols=17 Identities=29% Similarity=0.534 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 23 ki~vvG~~~vGKTsLi~ 39 (187)
T 3c5c_A 23 NLAILGRRGAGKSALTV 39 (187)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 59999999999999764
No 350
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=78.84 E-value=0.63 Score=45.11 Aligned_cols=21 Identities=38% Similarity=0.494 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|++|+||||++.
T Consensus 19 ~~~~~i~~~G~~g~GKst~~~ 39 (223)
T 3ld9_A 19 PGSMFITFEGIDGSGKTTQSH 39 (223)
T ss_dssp CCCEEEEEECSTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457789999999999999765
No 351
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=78.82 E-value=0.69 Score=42.46 Aligned_cols=18 Identities=39% Similarity=0.451 Sum_probs=15.6
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|.+|+|||||..
T Consensus 39 ~~i~ivG~~gvGKTtl~~ 56 (226)
T 2hf9_A 39 VAFDFMGAIGSGKTLLIE 56 (226)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHH
Confidence 468899999999999765
No 352
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=78.81 E-value=0.55 Score=41.00 Aligned_cols=17 Identities=24% Similarity=0.264 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+|||||..
T Consensus 9 ki~~vG~~~vGKTsli~ 25 (178)
T 2iwr_A 9 RLGVLGDARSGKSSLIH 25 (178)
T ss_dssp EEEEECCGGGCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 353
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=78.81 E-value=0.59 Score=54.73 Aligned_cols=22 Identities=41% Similarity=0.724 Sum_probs=19.2
Q ss_pred CCCCEEEEEeCCCCCccccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLSTD 353 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsad 353 (563)
+.++-++|.|+||+|||+|+.|
T Consensus 44 P~~~lvv~tG~SGSGKSSLafd 65 (993)
T 2ygr_A 44 PRDALIVFTGLSGSGKSSLAFD 65 (993)
T ss_dssp ESSSEEEEEESTTSSHHHHHTT
T ss_pred cCCCEEEEECCCCCcHHHHHHH
Confidence 4578899999999999999874
No 354
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.80 E-value=0.59 Score=49.85 Aligned_cols=19 Identities=42% Similarity=0.646 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-+.++|+|++|||||+|+.
T Consensus 215 prGvLL~GPPGtGKTllAk 233 (437)
T 4b4t_L 215 PKGVLLYGPPGTGKTLLAK 233 (437)
T ss_dssp CCEEEEESCTTSSHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 3579999999999999764
No 355
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=78.76 E-value=0.67 Score=41.21 Aligned_cols=17 Identities=35% Similarity=0.428 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 24 ki~vvG~~~~GKSsli~ 40 (189)
T 2gf9_A 24 KLLLIGNSSVGKTSFLF 40 (189)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 356
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=78.75 E-value=0.54 Score=51.21 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|+|++|||||||..
T Consensus 60 g~~vll~Gp~GtGKTtlar 78 (604)
T 3k1j_A 60 KRHVLLIGEPGTGKSMLGQ 78 (604)
T ss_dssp TCCEEEECCTTSSHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHH
Confidence 4589999999999999764
No 357
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=78.72 E-value=0.61 Score=54.52 Aligned_cols=22 Identities=41% Similarity=0.773 Sum_probs=19.1
Q ss_pred CCCCEEEEEeCCCCCccccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLSTD 353 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsad 353 (563)
+.++-++|.|+||+|||+|+.|
T Consensus 42 P~~~lvv~tG~SGSGKSSLafd 63 (972)
T 2r6f_A 42 PRGKLVVLTGLSGSGKSSLAFD 63 (972)
T ss_dssp ETTSEEEEEESTTSSHHHHHTT
T ss_pred cCCcEEEEECCCCCCHHHHHHH
Confidence 4477899999999999999874
No 358
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=78.72 E-value=0.62 Score=48.90 Aligned_cols=19 Identities=42% Similarity=0.579 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
.+.++|+|++|||||+|+.
T Consensus 167 ~~~vLL~GppGtGKT~lA~ 185 (444)
T 2zan_A 167 WRGILLFGPPGTGKSYLAK 185 (444)
T ss_dssp CSEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 4679999999999999774
No 359
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=78.69 E-value=0.67 Score=42.06 Aligned_cols=18 Identities=44% Similarity=0.658 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|+|||||..
T Consensus 8 ~ki~vvG~~~~GKTsli~ 25 (214)
T 2fh5_B 8 RAVLFVGLCDSGKTLLFV 25 (214)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 360
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=78.62 E-value=0.71 Score=41.62 Aligned_cols=18 Identities=28% Similarity=0.573 Sum_probs=15.6
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 21 ~ki~~vG~~~vGKTsLi~ 38 (196)
T 3llu_A 21 PRILLMGLRRSGKSSIQK 38 (196)
T ss_dssp CEEEEEESTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999843
No 361
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=78.49 E-value=0.72 Score=41.57 Aligned_cols=20 Identities=45% Similarity=0.630 Sum_probs=15.9
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
....++|.|++|+|||||..
T Consensus 22 ~~~ki~~vG~~~vGKSsli~ 41 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLH 41 (190)
T ss_dssp --CEEEEEESTTSSHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHH
Confidence 34479999999999999765
No 362
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.48 E-value=0.6 Score=49.63 Aligned_cols=45 Identities=22% Similarity=0.358 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHhcccCceeeeccccccC-CCCCEEEEEeCCCCCcccccc
Q 008519 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 303 EmKK~iLTl~n~ll~~~G~LpmHgsanv~-~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+.....+.+....++.- .+ +--+.++|+|++|||||+|+.
T Consensus 179 ~~k~~l~e~v~~pl~~p~~~~~-----~g~~~prGiLL~GPPGtGKT~lak 224 (428)
T 4b4t_K 179 MQKQEIREAVELPLVQADLYEQ-----IGIDPPRGVLLYGPPGTGKTMLVK 224 (428)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHH-----HCCCCCCEEEEESCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHh-----CCCCCCceEEEECCCCCCHHHHHH
Confidence 5677666555433322212111 12 224579999999999999765
No 363
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=78.42 E-value=0.61 Score=49.37 Aligned_cols=18 Identities=44% Similarity=0.754 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||||+.
T Consensus 51 ~~vLL~GppGtGKTtlAr 68 (447)
T 3pvs_A 51 HSMILWGPPGTGKTTLAE 68 (447)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCcHHHHHH
Confidence 368999999999999765
No 364
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=78.38 E-value=0.94 Score=54.19 Aligned_cols=21 Identities=33% Similarity=0.564 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..+++.|.||+|||||..
T Consensus 1103 ~~Ge~vaIVG~SGsGKSTL~~ 1123 (1321)
T 4f4c_A 1103 EPGQTLALVGPSGCGKSTVVA 1123 (1321)
T ss_dssp CTTCEEEEECSTTSSTTSHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 568899999999999999765
No 365
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=78.38 E-value=0.73 Score=40.87 Aligned_cols=18 Identities=33% Similarity=0.527 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 17 ~~i~v~G~~~~GKssl~~ 34 (187)
T 1zj6_A 17 HKVIIVGLDNAGKTTILY 34 (187)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 366
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=78.32 E-value=0.7 Score=41.38 Aligned_cols=17 Identities=41% Similarity=0.638 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (207)
T 1vg8_A 10 KVIILGDSGVGKTSLMN 26 (207)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 367
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=78.25 E-value=0.74 Score=41.56 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 26 ki~vvG~~~~GKSsli~ 42 (201)
T 3oes_A 26 KVVILGYRCVGKTSLAH 42 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 59999999999999765
No 368
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=78.20 E-value=0.93 Score=48.94 Aligned_cols=18 Identities=39% Similarity=0.610 Sum_probs=16.0
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|++|+||||++.
T Consensus 36 ~lIvlvGlpGSGKSTia~ 53 (520)
T 2axn_A 36 TVIVMVGLPARGKTYISK 53 (520)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999775
No 369
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=78.18 E-value=0.72 Score=47.27 Aligned_cols=20 Identities=35% Similarity=0.579 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++++|++|+|||||+.
T Consensus 60 ~G~iv~I~G~pGsGKTtLal 79 (349)
T 2zr9_A 60 RGRVIEIYGPESSGKTTVAL 79 (349)
T ss_dssp TTSEEEEEESTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 47889999999999999754
No 370
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=78.16 E-value=0.67 Score=41.00 Aligned_cols=18 Identities=33% Similarity=0.527 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 22 ~~i~v~G~~~~GKSsli~ 39 (181)
T 2h17_A 22 HKVIIVGLDNAGKTTILY 39 (181)
T ss_dssp EEEEEEEETTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 369999999999999765
No 371
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=78.14 E-value=0.71 Score=41.40 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLF 26 (203)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 372
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=78.08 E-value=0.72 Score=41.18 Aligned_cols=17 Identities=29% Similarity=0.304 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 25 ki~~vG~~~~GKSsl~~ 41 (194)
T 3reg_A 25 KIVVVGDGAVGKTCLLL 41 (194)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 373
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=78.06 E-value=0.75 Score=41.21 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 25 ki~vvG~~~~GKSsli~ 41 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVC 41 (192)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 374
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=78.05 E-value=0.64 Score=47.79 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=16.1
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|++|+|||||+.
T Consensus 6 ~~i~i~GptGsGKTtla~ 23 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDLAM 23 (323)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 479999999999999875
No 375
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=78.04 E-value=0.75 Score=41.45 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (206)
T 2bcg_Y 10 KLLLIGNSGVGKSCLLL 26 (206)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 376
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=78.00 E-value=0.71 Score=41.20 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 23 ki~v~G~~~~GKSsli~ 39 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLL 39 (191)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 377
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=77.92 E-value=0.75 Score=46.03 Aligned_cols=21 Identities=38% Similarity=0.616 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|+|.+|+|||||+.
T Consensus 105 ~~G~i~~i~G~~GsGKT~la~ 125 (324)
T 2z43_A 105 ETRTMTEFFGEFGSGKTQLCH 125 (324)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHhHHHH
Confidence 457899999999999999764
No 378
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=77.89 E-value=0.75 Score=42.05 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
.+++|.|.+|+|||||..
T Consensus 31 ~~i~i~G~~g~GKTTl~~ 48 (221)
T 2wsm_A 31 VAVNIMGAIGSGKTLLIE 48 (221)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHH
Confidence 479999999999999765
No 379
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=77.83 E-value=0.74 Score=40.56 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 17 ~i~v~G~~~~GKssli~ 33 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLL 33 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 380
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=77.78 E-value=0.74 Score=41.34 Aligned_cols=17 Identities=35% Similarity=0.601 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 28 ki~vvG~~~~GKSsLi~ 44 (192)
T 2il1_A 28 QVIIIGSRGVGKTSLME 44 (192)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999765
No 381
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=77.70 E-value=0.74 Score=41.27 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 29 ~ki~v~G~~~vGKSsli~ 46 (196)
T 2atv_A 29 VKLAIFGRAGVGKSALVV 46 (196)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999765
No 382
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=77.67 E-value=0.67 Score=48.06 Aligned_cols=20 Identities=40% Similarity=0.669 Sum_probs=17.2
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|+|++|+|||||..
T Consensus 60 ~G~i~~I~GppGsGKSTLal 79 (356)
T 3hr8_A 60 RGRIVEIFGQESSGKTTLAL 79 (356)
T ss_dssp TTEEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 35789999999999999764
No 383
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=77.45 E-value=0.68 Score=47.91 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=22.5
Q ss_pred CEEEEEeCCCCCccccccc----CCCceee-cCceeec
Q 008519 335 DVALFFGLSGTGKTTLSTD----HNRYLIG-DDEHCWG 367 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsad----~~r~lIg-DDe~~w~ 367 (563)
..+++.|+||+|||||+.. .+..+|+ |+.+++.
T Consensus 8 ~lI~I~GptgSGKTtla~~La~~l~~~iis~Ds~qvYr 45 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQ 45 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBT
T ss_pred ceEEEECCCcCcHHHHHHHHHHHcCCceeccccccccc
Confidence 4799999999999998752 2334554 5444443
No 384
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=77.44 E-value=0.58 Score=41.69 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=4.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 22 ~i~v~G~~~~GKssli~ 38 (208)
T 2yc2_C 22 KVAVVGEATVGKSALIS 38 (208)
T ss_dssp EEEEC------------
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 385
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=77.43 E-value=0.8 Score=41.49 Aligned_cols=17 Identities=41% Similarity=0.554 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 27 ki~v~G~~~~GKSsLi~ 43 (200)
T 2o52_A 27 KFLVIGSAGTGKSCLLH 43 (200)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 386
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=77.43 E-value=0.64 Score=48.79 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|+|||||..
T Consensus 130 ~~~lll~Gp~G~GKTtLa~ 148 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQ 148 (440)
T ss_dssp SCCEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4568999999999999875
No 387
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=77.38 E-value=0.77 Score=41.10 Aligned_cols=18 Identities=28% Similarity=0.374 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 21 ~ki~~~G~~~~GKssl~~ 38 (201)
T 2q3h_A 21 VKCVLVGDGAVGKTSLVV 38 (201)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999764
No 388
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=77.18 E-value=0.82 Score=42.06 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 28 ki~lvG~~~vGKSsLi~ 44 (201)
T 2ew1_A 28 KIVLIGNAGVGKTCLVR 44 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 389
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=77.17 E-value=0.82 Score=41.65 Aligned_cols=18 Identities=28% Similarity=0.254 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 31 ~ki~vvG~~~~GKSsLi~ 48 (204)
T 4gzl_A 31 IKCVVVGDGAVGKTCLLI 48 (204)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred EEEEEECcCCCCHHHHHH
Confidence 469999999999999763
No 390
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=77.15 E-value=0.71 Score=46.81 Aligned_cols=21 Identities=38% Similarity=0.385 Sum_probs=18.2
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|+|.+|+|||||..
T Consensus 120 ~~G~i~~I~G~~GsGKTtla~ 140 (343)
T 1v5w_A 120 ESMAITEAFGEFRTGKTQLSH 140 (343)
T ss_dssp CSSEEEEEECCTTCTHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457889999999999999765
No 391
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=77.10 E-value=0.82 Score=41.55 Aligned_cols=17 Identities=29% Similarity=0.300 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 27 ki~vvG~~~~GKSsli~ 43 (207)
T 2fv8_A 27 KLVVVGDGACGKTCLLI 43 (207)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 392
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=77.09 E-value=0.83 Score=48.26 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=15.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.||+|||||..
T Consensus 71 ~valvG~nGaGKSTLln 87 (413)
T 1tq4_A 71 NVAVTGETGSGKSSFIN 87 (413)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 79999999999999765
No 393
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=76.87 E-value=0.81 Score=41.12 Aligned_cols=18 Identities=39% Similarity=0.475 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 21 ~~i~v~G~~~~GKSsli~ 38 (213)
T 3cph_A 21 MKILLIGDSGVGKSCLLV 38 (213)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999764
No 394
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=76.86 E-value=0.78 Score=51.21 Aligned_cols=20 Identities=50% Similarity=0.675 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..++|.|+|||||||++.
T Consensus 51 ~g~lIvLtGlsGSGKSTlAr 70 (630)
T 1x6v_B 51 RGCTVWLTGLSGAGKTTVSM 70 (630)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHH
Confidence 45679999999999999765
No 395
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=76.83 E-value=0.79 Score=49.53 Aligned_cols=18 Identities=33% Similarity=0.370 Sum_probs=16.3
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|+||+|||||..
T Consensus 30 e~~~liG~nGsGKSTLl~ 47 (483)
T 3euj_A 30 LVTTLSGGNGAGKSTTMA 47 (483)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred ceEEEECCCCCcHHHHHH
Confidence 899999999999999654
No 396
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=76.80 E-value=0.81 Score=41.24 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|+|||||..
T Consensus 29 ~ki~v~G~~~~GKSsli~ 46 (199)
T 2p5s_A 29 YKIVLAGDAAVGKSSFLM 46 (199)
T ss_dssp EEEEEESSTTSSHHHHHH
T ss_pred eEEEEECcCCCCHHHHHH
Confidence 359999999999999765
No 397
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=76.77 E-value=0.83 Score=40.79 Aligned_cols=18 Identities=33% Similarity=0.359 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 23 ~ki~v~G~~~~GKSsli~ 40 (188)
T 1zd9_A 23 MELTLVGLQYSGKTTFVN 40 (188)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 359999999999999765
No 398
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=76.74 E-value=0.82 Score=41.60 Aligned_cols=17 Identities=35% Similarity=0.434 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 13 ki~vvG~~~~GKSsli~ 29 (218)
T 4djt_A 13 KICLIGDGGVGKTTYIN 29 (218)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 399
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=76.67 E-value=0.82 Score=42.41 Aligned_cols=18 Identities=17% Similarity=0.405 Sum_probs=16.0
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|.+|+|||||..
T Consensus 30 ~kI~vvG~~~vGKSsLin 47 (228)
T 2qu8_A 30 KTIILSGAPNVGKSSFMN 47 (228)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 469999999999999765
No 400
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=76.52 E-value=0.7 Score=44.47 Aligned_cols=17 Identities=47% Similarity=0.593 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|++|+||||++.
T Consensus 48 ~~ll~G~~G~GKT~la~ 64 (327)
T 1iqp_A 48 HLLFAGPPGVGKTTAAL 64 (327)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred eEEEECcCCCCHHHHHH
Confidence 48999999999999764
No 401
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=76.46 E-value=0.71 Score=44.22 Aligned_cols=16 Identities=50% Similarity=0.686 Sum_probs=14.6
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++||||||++.
T Consensus 41 ~ll~G~~G~GKt~la~ 56 (319)
T 2chq_A 41 LLFSGPPGTGKTATAI 56 (319)
T ss_dssp EEEESSSSSSHHHHHH
T ss_pred EEEECcCCcCHHHHHH
Confidence 8999999999999764
No 402
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=76.46 E-value=0.88 Score=41.70 Aligned_cols=17 Identities=41% Similarity=0.569 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 17 ki~v~G~~~~GKSsli~ 33 (221)
T 3gj0_A 17 KLVLVGDGGTGKTTFVK 33 (221)
T ss_dssp EEEEEECTTSSHHHHHT
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 403
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=76.44 E-value=0.81 Score=40.57 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
.-.++++|++|+|||||..
T Consensus 22 ~~~i~v~G~~~~GKssli~ 40 (189)
T 2x77_A 22 KIRVLMLGLDNAGKTSILY 40 (189)
T ss_dssp CEEEEEEEETTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 404
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=76.42 E-value=0.79 Score=47.20 Aligned_cols=19 Identities=26% Similarity=0.510 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...+++.|+||+|||||+.
T Consensus 10 ~~~i~i~GptgsGKt~la~ 28 (316)
T 3foz_A 10 PKAIFLMGPTASGKTALAI 28 (316)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEECCCccCHHHHHH
Confidence 3578999999999999876
No 405
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=76.31 E-value=0.84 Score=41.49 Aligned_cols=17 Identities=47% Similarity=0.491 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 27 ki~vvG~~~~GKSsLi~ 43 (217)
T 2f7s_A 27 KLLALGDSGVGKTTFLY 43 (217)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 406
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=76.28 E-value=0.9 Score=40.41 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 20 ki~v~G~~~~GKssli~ 36 (194)
T 2atx_A 20 KCVVVGDGAVGKTCLLM 36 (194)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 407
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=76.23 E-value=0.93 Score=42.71 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=16.8
Q ss_pred CCCCEEEEEeCCCCCcccc
Q 008519 332 KDGDVALFFGLSGTGKTTL 350 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTL 350 (563)
..|+.+++.|.+||||||+
T Consensus 74 ~~g~~~~i~g~TGsGKTt~ 92 (235)
T 3llm_A 74 SQNSVVIIRGATGCGKTTQ 92 (235)
T ss_dssp HHCSEEEEECCTTSSHHHH
T ss_pred hcCCEEEEEeCCCCCcHHh
Confidence 4578999999999999984
No 408
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=76.21 E-value=0.89 Score=43.88 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 5 ~i~lvG~~g~GKTTL~n 21 (271)
T 3k53_A 5 TVALVGNPNVGKTTIFN 21 (271)
T ss_dssp EEEEEECSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 68999999999999765
No 409
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=76.17 E-value=0.91 Score=40.94 Aligned_cols=19 Identities=37% Similarity=0.434 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
.-.++|+|++|+|||||..
T Consensus 29 ~~ki~v~G~~~vGKSsLi~ 47 (192)
T 2b6h_A 29 QMRILMVGLDAAGKTTILY 47 (192)
T ss_dssp CEEEEEEESTTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 410
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=76.09 E-value=0.74 Score=52.27 Aligned_cols=21 Identities=38% Similarity=0.574 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+..++|.|+||||||||+.
T Consensus 236 ~~~~~vLL~Gp~GtGKTtLar 256 (806)
T 1ypw_A 236 KPPRGILLYGPPGTGKTLIAR 256 (806)
T ss_dssp CCCCEEEECSCTTSSHHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHHH
Confidence 456789999999999999765
No 411
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=76.03 E-value=0.8 Score=45.34 Aligned_cols=21 Identities=33% Similarity=0.544 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|..++|+|.+|+|||||+.
T Consensus 96 ~~g~i~~i~G~~gsGKT~la~ 116 (322)
T 2i1q_A 96 ESQSVTEFAGVFGSGKTQIMH 116 (322)
T ss_dssp ETTEEEEEEESTTSSHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHH
Confidence 346789999999999999765
No 412
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=75.99 E-value=0.93 Score=41.03 Aligned_cols=17 Identities=24% Similarity=0.274 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 11 ki~i~G~~~~GKTsli~ 27 (212)
T 2j0v_A 11 KCVTVGDGAVGKTCMLI 27 (212)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 413
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=75.94 E-value=0.92 Score=41.64 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 36 ki~vvG~~~vGKSsli~ 52 (214)
T 2j1l_A 36 KVVLVGDGGCGKTSLLM 52 (214)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 414
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.82 E-value=0.74 Score=48.82 Aligned_cols=18 Identities=39% Similarity=0.684 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
+.++|+|++|||||.|+.
T Consensus 183 rGvLL~GPPGTGKTllAk 200 (405)
T 4b4t_J 183 KGVILYGPPGTGKTLLAR 200 (405)
T ss_dssp CCEEEESCSSSSHHHHHH
T ss_pred CceEEeCCCCCCHHHHHH
Confidence 469999999999999764
No 415
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=75.70 E-value=0.92 Score=43.03 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|.+|+|||||..
T Consensus 23 ~~I~lvG~~g~GKStl~n 40 (260)
T 2xtp_A 23 LRIILVGKTGTGKSAAGN 40 (260)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 369999999999999765
No 416
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=75.47 E-value=0.85 Score=48.79 Aligned_cols=20 Identities=30% Similarity=0.376 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|..+++||+||+|||||..
T Consensus 173 rGQr~~IvG~sG~GKTtLl~ 192 (422)
T 3ice_A 173 RGQRGLIVAPPKAGKTMLLQ 192 (422)
T ss_dssp TTCEEEEECCSSSSHHHHHH
T ss_pred CCcEEEEecCCCCChhHHHH
Confidence 46799999999999999875
No 417
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=75.35 E-value=0.92 Score=44.70 Aligned_cols=18 Identities=39% Similarity=0.661 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+|||||..
T Consensus 39 ~~~ll~G~~G~GKT~la~ 56 (373)
T 1jr3_A 39 HAYLFSGTRGVGKTSIAR 56 (373)
T ss_dssp SEEEEESCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999764
No 418
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=75.31 E-value=0.58 Score=42.64 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|.+|+|||||..
T Consensus 29 ~~~i~v~G~~~~GKSslin 47 (223)
T 4dhe_A 29 QPEIAFAGRSNAGKSTAIN 47 (223)
T ss_dssp SCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHH
Confidence 3579999999999999765
No 419
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=75.29 E-value=1 Score=40.80 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 27 ki~vvG~~~~GKSsli~ 43 (201)
T 2gco_A 27 KLVIVGDGACGKTCLLI 43 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 420
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=75.10 E-value=0.97 Score=40.98 Aligned_cols=17 Identities=35% Similarity=0.645 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|++|+|||||..
T Consensus 8 kv~lvG~~~vGKSsL~~ 24 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLAN 24 (192)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999865
No 421
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=75.07 E-value=0.55 Score=47.76 Aligned_cols=19 Identities=32% Similarity=0.611 Sum_probs=16.9
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
..| ..+|.|.+|+|||||.
T Consensus 59 ~~G-~~~lvG~NGaGKStLl 77 (415)
T 4aby_A 59 GGG-FCAFTGETGAGKSIIV 77 (415)
T ss_dssp CSS-EEEEEESHHHHHHHHT
T ss_pred CCC-cEEEECCCCCCHHHHH
Confidence 567 9999999999999965
No 422
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=74.77 E-value=1 Score=41.40 Aligned_cols=17 Identities=35% Similarity=0.341 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 30 ki~vvG~~~vGKSsLi~ 46 (205)
T 1gwn_A 30 KIVVVGDSQCGKTALLH 46 (205)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999765
No 423
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=74.72 E-value=0.87 Score=45.29 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=16.4
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++|.|.+|||||+++.
T Consensus 25 ~~~vLi~Ge~GtGKt~lAr 43 (304)
T 1ojl_A 25 DATVLIHGDSGTGKELVAR 43 (304)
T ss_dssp TSCEEEESCTTSCHHHHHH
T ss_pred CCcEEEECCCCchHHHHHH
Confidence 4579999999999999764
No 424
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=74.71 E-value=0.79 Score=45.70 Aligned_cols=20 Identities=40% Similarity=0.705 Sum_probs=17.7
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|++++|.|.+|+||||++.
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~ 116 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAA 116 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 67889999999999999765
No 425
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=74.64 E-value=1 Score=43.63 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++++|.+|+|||||..
T Consensus 10 ~I~vvG~~g~GKSTLin 26 (274)
T 3t5d_A 10 TLMVVGESGLGKSTLIN 26 (274)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999775
No 426
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=74.28 E-value=0.88 Score=43.66 Aligned_cols=16 Identities=38% Similarity=0.574 Sum_probs=14.7
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
++|.|++|+||||++.
T Consensus 45 ~ll~G~~G~GKt~la~ 60 (323)
T 1sxj_B 45 MIISGMPGIGKTTSVH 60 (323)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECcCCCCHHHHHH
Confidence 8999999999999764
No 427
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=74.13 E-value=0.93 Score=47.75 Aligned_cols=19 Identities=32% Similarity=0.522 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...+++.|++|+||||++.
T Consensus 39 ~~~IvlvGlpGsGKSTia~ 57 (469)
T 1bif_A 39 PTLIVMVGLPARGKTYISK 57 (469)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHH
Confidence 3469999999999999765
No 428
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=74.11 E-value=0.88 Score=49.18 Aligned_cols=17 Identities=41% Similarity=0.610 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|||||||..
T Consensus 66 GvLL~GppGtGKTtLar 82 (499)
T 2dhr_A 66 GVLLVGPPGVGKTHLAR 82 (499)
T ss_dssp EEEEECSSSSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 49999999999999764
No 429
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=74.09 E-value=0.97 Score=48.57 Aligned_cols=18 Identities=44% Similarity=0.597 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
+.++|.|++|||||||..
T Consensus 50 ~gvLL~GppGtGKT~Lar 67 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLAR 67 (476)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 459999999999999864
No 430
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=74.06 E-value=1.1 Score=40.70 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=15.2
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 31 ki~vvG~~~vGKSsli~ 47 (201)
T 2hup_A 31 KLVLVGDASVGKTCVVQ 47 (201)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 431
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=74.03 E-value=0.7 Score=49.19 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+.+++|.|++|+||||+++
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~ 115 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAG 115 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 432
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.88 E-value=0.97 Score=48.49 Aligned_cols=19 Identities=37% Similarity=0.644 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-+.++|+|++|||||.|+.
T Consensus 216 prGvLLyGPPGTGKTlLAk 234 (437)
T 4b4t_I 216 PKGVILYGAPGTGKTLLAK 234 (437)
T ss_dssp CSEEEEESSTTTTHHHHHH
T ss_pred CCCCceECCCCchHHHHHH
Confidence 4679999999999999764
No 433
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=73.68 E-value=0.95 Score=48.13 Aligned_cols=18 Identities=39% Similarity=0.628 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|+||+|||||+.
T Consensus 3 ~~i~i~GptgsGKttla~ 20 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSI 20 (409)
T ss_dssp EEEEEEECSSSSHHHHHH
T ss_pred cEEEEECcchhhHHHHHH
Confidence 368999999999999875
No 434
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=73.60 E-value=1.1 Score=47.93 Aligned_cols=19 Identities=37% Similarity=0.590 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|+|++|||||+|+.
T Consensus 238 ~~~vLL~GppGtGKT~lAr 256 (489)
T 3hu3_A 238 PRGILLYGPPGTGKTLIAR 256 (489)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCcEEEECcCCCCHHHHHH
Confidence 4579999999999999764
No 435
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=73.37 E-value=1.2 Score=46.22 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=16.6
Q ss_pred CCCEEEEEeCCCCCccccc
Q 008519 333 DGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLs 351 (563)
.|..++|.|++|+|||||.
T Consensus 25 ~~~~~~i~G~nG~GKstll 43 (430)
T 1w1w_A 25 ESNFTSIIGPNGSGKSNMM 43 (430)
T ss_dssp TCSEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH
Confidence 4678999999999999944
No 436
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.24 E-value=0.87 Score=49.21 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-+.++|+|++|||||+|+.
T Consensus 243 prGILLyGPPGTGKTlLAk 261 (467)
T 4b4t_H 243 PKGILLYGPPGTGKTLCAR 261 (467)
T ss_dssp CSEEEECSCTTSSHHHHHH
T ss_pred CCceEeeCCCCCcHHHHHH
Confidence 4679999999999998764
No 437
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=73.22 E-value=1.1 Score=47.92 Aligned_cols=19 Identities=37% Similarity=0.562 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|++|||||||+.
T Consensus 77 ~~~lLL~GppGtGKTtla~ 95 (516)
T 1sxj_A 77 FRAAMLYGPPGIGKTTAAH 95 (516)
T ss_dssp CSEEEEECSTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 3689999999999999765
No 438
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=73.10 E-value=1.2 Score=53.16 Aligned_cols=21 Identities=33% Similarity=0.605 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 442 ~~G~~vaivG~sGsGKSTll~ 462 (1321)
T 4f4c_A 442 NAGQTVALVGSSGCGKSTIIS 462 (1321)
T ss_dssp CTTCEEEEEECSSSCHHHHHH
T ss_pred cCCcEEEEEecCCCcHHHHHH
Confidence 678999999999999999765
No 439
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=73.03 E-value=1.2 Score=41.17 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 29 ki~vvG~~~vGKSsL~~ 45 (214)
T 3q3j_B 29 KLVLVGDVQCGKTAMLQ 45 (214)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999765
No 440
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=72.87 E-value=1.1 Score=42.87 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++++|.+|+|||||..
T Consensus 23 ~I~lvG~~g~GKSSlin 39 (247)
T 3lxw_A 23 RLILVGRTGAGKSATGN 39 (247)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 59999999999999765
No 441
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=72.80 E-value=1.1 Score=47.28 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=15.1
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.||+|||||..
T Consensus 33 ~I~lvG~sGaGKSTLln 49 (418)
T 2qag_C 33 TLMVVGESGLGKSTLIN 49 (418)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 47999999999999765
No 442
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=72.76 E-value=1.1 Score=52.40 Aligned_cols=21 Identities=33% Similarity=0.354 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|++|+|||||..
T Consensus 459 ~~Ge~v~LiGpNGsGKSTLLk 479 (986)
T 2iw3_A 459 KRARRYGICGPNGCGKSTLMR 479 (986)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999654
No 443
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=72.70 E-value=1.1 Score=48.27 Aligned_cols=19 Identities=21% Similarity=0.574 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|+|++|||||+|+.
T Consensus 41 ~~~VLL~GpPGtGKT~LAr 59 (500)
T 3nbx_X 41 GESVFLLGPPGIAKSLIAR 59 (500)
T ss_dssp TCEEEEECCSSSSHHHHHH
T ss_pred CCeeEeecCchHHHHHHHH
Confidence 4589999999999999765
No 444
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=75.04 E-value=0.74 Score=41.54 Aligned_cols=18 Identities=28% Similarity=0.254 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|++|+|||||..
T Consensus 31 ~ki~v~G~~~~GKSsli~ 48 (204)
T 3th5_A 31 IKCVVVGDGAVGKTCLLI 48 (204)
Confidence 459999999999999764
No 445
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=72.61 E-value=1 Score=46.63 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|..++|+|++|+|||||+.
T Consensus 123 gsviLI~GpPGsGKTtLAl 141 (331)
T 2vhj_A 123 SGMVIVTGKGNSGKTPLVH 141 (331)
T ss_dssp SEEEEEECSCSSSHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHH
Confidence 5578999999999999875
No 446
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=72.58 E-value=1.3 Score=42.80 Aligned_cols=18 Identities=28% Similarity=0.600 Sum_probs=16.1
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|+.|+|||||..
T Consensus 32 ~~v~i~G~~G~GKT~Ll~ 49 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLR 49 (350)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCcCCHHHHHH
Confidence 589999999999999765
No 447
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=72.56 E-value=1.2 Score=39.77 Aligned_cols=16 Identities=38% Similarity=0.827 Sum_probs=14.3
Q ss_pred CEEEEEeCCCCCcccc
Q 008519 335 DVALFFGLSGTGKTTL 350 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTL 350 (563)
...+|.|+.|+|||||
T Consensus 24 g~~~I~G~NGsGKSti 39 (149)
T 1f2t_A 24 GINLIIGQNGSGKSSL 39 (149)
T ss_dssp EEEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 3789999999999995
No 448
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=72.28 E-value=1.1 Score=45.94 Aligned_cols=19 Identities=32% Similarity=0.644 Sum_probs=15.5
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
..| ..+|.|++|+|||||.
T Consensus 22 ~~g-~~~i~G~NGaGKTTll 40 (365)
T 3qf7_A 22 QSG-ITVVEGPNGAGKSSLF 40 (365)
T ss_dssp CSE-EEEEECCTTSSHHHHH
T ss_pred CCC-eEEEECCCCCCHHHHH
Confidence 345 7889999999999953
No 449
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=72.19 E-value=1.3 Score=52.83 Aligned_cols=21 Identities=38% Similarity=0.566 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 414 ~~G~~~~ivG~sGsGKSTl~~ 434 (1284)
T 3g5u_A 414 KSGQTVALVGNSGCGKSTTVQ 434 (1284)
T ss_dssp CTTCEEEEECCSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 679999999999999999765
No 450
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=72.08 E-value=1.3 Score=40.85 Aligned_cols=19 Identities=32% Similarity=0.337 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|...++.|+-|+||||+..
T Consensus 3 g~i~vi~G~~gsGKTT~ll 21 (184)
T 2orw_A 3 GKLTVITGPMYSGKTTELL 21 (184)
T ss_dssp CCEEEEEESTTSSHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHH
Confidence 6789999999999999753
No 451
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=71.64 E-value=1.3 Score=40.86 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 15 ki~v~G~~~vGKSsli~ 31 (223)
T 3cpj_B 15 KIVLIGDSGVGKSNLLS 31 (223)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999765
No 452
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=71.46 E-value=1.4 Score=44.03 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|.+|+|||||+.
T Consensus 66 ~~G~l~li~G~pG~GKTtl~l 86 (315)
T 3bh0_A 66 KRRNFVLIAARPSMGKTAFAL 86 (315)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 568899999999999999765
No 453
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=71.46 E-value=1.1 Score=41.16 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|.+|+||||++.
T Consensus 4 ~~i~i~G~~gsGkst~~~ 21 (219)
T 2h92_A 4 INIALDGPAAAGKSTIAK 21 (219)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 454
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=71.02 E-value=1.1 Score=45.68 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=17.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+..++|.|++|||||++..
T Consensus 43 ~~~~~lli~GpPGTGKT~~v~ 63 (318)
T 3te6_A 43 SQNKLFYITNADDSTKFQLVN 63 (318)
T ss_dssp TCCCEEEEECCCSHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHH
Confidence 346789999999999998654
No 455
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=70.91 E-value=1.4 Score=44.93 Aligned_cols=20 Identities=25% Similarity=0.180 Sum_probs=17.4
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
++.+++|.|.+|+|||||..
T Consensus 73 ~~~~v~lvG~pgaGKSTLln 92 (349)
T 2www_A 73 LAFRVGLSGPPGAGKSTFIE 92 (349)
T ss_dssp SCEEEEEECCTTSSHHHHHH
T ss_pred CceEEEEEcCCCCCHHHHHH
Confidence 46689999999999999765
No 456
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=70.84 E-value=1.4 Score=50.72 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=19.0
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|.||+|||||..
T Consensus 521 ~~Geiv~I~G~nGSGKSTLl~ 541 (842)
T 2vf7_A 521 PLGVMTSVTGVSGSGKSTLVS 541 (842)
T ss_dssp ESSSEEEEECCTTSSHHHHCC
T ss_pred cCCCEEEEEcCCCcCHHHHHH
Confidence 568999999999999999875
No 457
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=70.83 E-value=1.2 Score=44.52 Aligned_cols=19 Identities=42% Similarity=0.602 Sum_probs=17.1
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+.+++|.|.+|+||||++.
T Consensus 98 ~~vi~i~G~~G~GKTT~~~ 116 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAG 116 (297)
T ss_dssp SEEEEEECSSCSSTTHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 7889999999999999765
No 458
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=70.78 E-value=1.2 Score=46.28 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=16.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.| .++++|++|+|||||+.
T Consensus 28 ~G-iteI~G~pGsGKTtL~L 46 (333)
T 3io5_A 28 SG-LLILAGPSKSFKSNFGL 46 (333)
T ss_dssp SE-EEEEEESSSSSHHHHHH
T ss_pred CC-eEEEECCCCCCHHHHHH
Confidence 45 79999999999999764
No 459
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=70.67 E-value=1.4 Score=46.44 Aligned_cols=18 Identities=28% Similarity=0.604 Sum_probs=15.5
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||+|..
T Consensus 202 ~~~LL~G~pG~GKT~la~ 219 (468)
T 3pxg_A 202 NNPVLIGEPGVGKTAIAE 219 (468)
T ss_dssp CEEEEESCTTTTTHHHHH
T ss_pred CCeEEECCCCCCHHHHHH
Confidence 357999999999999764
No 460
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=70.62 E-value=1.4 Score=42.26 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
-.++|+|.+|+|||||..
T Consensus 37 ~~I~lvG~~g~GKSSLin 54 (262)
T 3def_A 37 MTVLVLGKGGVGKSSTVN 54 (262)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 369999999999999765
No 461
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=70.44 E-value=1.6 Score=43.46 Aligned_cols=16 Identities=31% Similarity=0.625 Sum_probs=14.6
Q ss_pred EEEEEeCCCCCccccc
Q 008519 336 VALFFGLSGTGKTTLS 351 (563)
Q Consensus 336 v~lfFGLSGTGKTTLs 351 (563)
..+|.|++|+|||||.
T Consensus 26 ~~~i~G~NGsGKS~ll 41 (322)
T 1e69_A 26 VTAIVGPNGSGKSNII 41 (322)
T ss_dssp EEEEECCTTTCSTHHH
T ss_pred cEEEECCCCCcHHHHH
Confidence 8999999999999943
No 462
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=70.33 E-value=1.5 Score=42.28 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++++|.+|+|||||..
T Consensus 41 ~I~vvG~~g~GKSSLin 57 (270)
T 1h65_A 41 TILVMGKGGVGKSSTVN 57 (270)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 69999999999999765
No 463
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=69.52 E-value=1.4 Score=48.06 Aligned_cols=21 Identities=33% Similarity=0.518 Sum_probs=17.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.+..++|.|++|+||||++.
T Consensus 370 ~~~~~I~l~G~~GsGKSTia~ 390 (546)
T 2gks_A 370 KQGFCVWLTGLPCAGKSTIAE 390 (546)
T ss_dssp GCCEEEEEECSTTSSHHHHHH
T ss_pred ccceEEEccCCCCCCHHHHHH
Confidence 346689999999999999765
No 464
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=69.51 E-value=1.6 Score=42.17 Aligned_cols=18 Identities=33% Similarity=0.647 Sum_probs=15.9
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..+++.|+.|+|||||..
T Consensus 31 ~~v~i~G~~G~GKT~L~~ 48 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIK 48 (357)
T ss_dssp SEEEEEESTTSSHHHHHH
T ss_pred CcEEEECCCCCCHHHHHH
Confidence 489999999999999765
No 465
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=69.49 E-value=1.6 Score=52.10 Aligned_cols=21 Identities=38% Similarity=0.608 Sum_probs=18.5
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
+.|+.+++.|+||+|||||..
T Consensus 1057 ~~Ge~v~ivG~sGsGKSTl~~ 1077 (1284)
T 3g5u_A 1057 KKGQTLALVGSSGCGKSTVVQ 1077 (1284)
T ss_dssp CSSSEEEEECSSSTTHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 458899999999999999765
No 466
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=69.46 E-value=1.2 Score=47.17 Aligned_cols=20 Identities=40% Similarity=0.705 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.+.+++|.|++|+||||++.
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~ 116 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAA 116 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 56789999999999999765
No 467
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=69.39 E-value=1.5 Score=45.13 Aligned_cols=20 Identities=35% Similarity=0.587 Sum_probs=17.6
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|+.++|+|.+|+|||||+.
T Consensus 62 ~G~ii~I~G~pGsGKTtLal 81 (356)
T 1u94_A 62 MGRIVEIYGPESSGKTTLTL 81 (356)
T ss_dssp TTSEEEEECSTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 468
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=69.22 E-value=1.6 Score=41.14 Aligned_cols=17 Identities=35% Similarity=0.645 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|++|+|||||..
T Consensus 39 kVvlvG~~~vGKSSLl~ 55 (211)
T 2g3y_A 39 RVVLIGEQGVGKSTLAN 55 (211)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999875
No 469
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=69.07 E-value=1.7 Score=42.17 Aligned_cols=17 Identities=47% Similarity=0.546 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 3 kI~lvG~~n~GKSTL~n 19 (256)
T 3iby_A 3 HALLIGNPNCGKTTLFN 19 (256)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 68999999999999765
No 470
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=68.96 E-value=1.3 Score=43.38 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=16.1
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
...++|.|+.||||||++.
T Consensus 58 kn~ili~GPPGtGKTt~a~ 76 (212)
T 1tue_A 58 KNCLVFCGPANTGKSYFGM 76 (212)
T ss_dssp CSEEEEESCGGGCHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 3469999999999999754
No 471
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=68.09 E-value=1.4 Score=46.69 Aligned_cols=19 Identities=42% Similarity=0.751 Sum_probs=16.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
..+++|.|++|+|||||++
T Consensus 99 ~~vI~ivG~~GvGKTTla~ 117 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAA 117 (432)
T ss_dssp CCCEEEECCSSSSTTHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3579999999999999776
No 472
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=67.81 E-value=1.8 Score=42.22 Aligned_cols=17 Identities=35% Similarity=0.397 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|.+|+|||||..
T Consensus 5 ~I~lvG~~n~GKSTLin 21 (274)
T 3i8s_A 5 TIGLIGNPNSGKTTLFN 21 (274)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 473
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=67.80 E-value=1.7 Score=50.40 Aligned_cols=20 Identities=35% Similarity=0.504 Sum_probs=18.0
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
+.|..+++.|+||+|||||.
T Consensus 608 ~~Geiv~I~G~SGSGKSTLl 627 (916)
T 3pih_A 608 PLGVFVCVTGVSGSGKSSLV 627 (916)
T ss_dssp ESSSEEEEECSTTSSHHHHH
T ss_pred cCCcEEEEEccCCCChhhhH
Confidence 45889999999999999985
No 474
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=67.72 E-value=1.8 Score=45.34 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|.+|+|||||..
T Consensus 201 ~~G~liiI~G~pG~GKTtl~l 221 (454)
T 2r6a_A 201 QRSDLIIVAARPSVGKTAFAL 221 (454)
T ss_dssp CTTCEEEEECCTTSCHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999765
No 475
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=67.55 E-value=1.6 Score=45.66 Aligned_cols=17 Identities=29% Similarity=0.698 Sum_probs=14.9
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|+|||||..
T Consensus 26 ~i~l~G~~G~GKTTl~~ 42 (359)
T 2ga8_A 26 CVILVGSPGSGKSTIAE 42 (359)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 38999999999999764
No 476
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=67.55 E-value=1.7 Score=42.69 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|.+|+|||||..
T Consensus 4 ~kI~lvG~~nvGKSTL~n 21 (272)
T 3b1v_A 4 TEIALIGNPNSGKTSLFN 21 (272)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 358999999999999765
No 477
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=67.37 E-value=1.1 Score=52.35 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=18.4
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|++|+|||||..
T Consensus 697 ~~GeivaIiGpNGSGKSTLLk 717 (986)
T 2iw3_A 697 SLSSRIAVIGPNGAGKSTLIN 717 (986)
T ss_dssp ETTCEEEECSCCCHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 457889999999999999765
No 478
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=67.32 E-value=2.1 Score=44.85 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|++|+|||||..
T Consensus 18 ~~g~~vgiVG~pnaGKSTL~n 38 (392)
T 1ni3_A 18 GNNLKTGIVGMPNVGKSTFFR 38 (392)
T ss_dssp SSCCEEEEEECSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 457899999999999999654
No 479
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=67.26 E-value=1.8 Score=40.44 Aligned_cols=17 Identities=35% Similarity=0.737 Sum_probs=14.8
Q ss_pred CEEEEEeCCCCCccccc
Q 008519 335 DVALFFGLSGTGKTTLS 351 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLs 351 (563)
...+|+|+.|+|||||.
T Consensus 24 ~~~~I~G~NgsGKStil 40 (203)
T 3qks_A 24 GINLIIGQNGSGKSSLL 40 (203)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred CeEEEEcCCCCCHHHHH
Confidence 47899999999999953
No 480
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=67.25 E-value=1.5 Score=47.00 Aligned_cols=19 Identities=37% Similarity=0.646 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
..+++|.|++|+||||+++
T Consensus 100 p~vIlivG~~G~GKTTt~~ 118 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVA 118 (443)
T ss_dssp SEEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHH
Confidence 5689999999999999765
No 481
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=67.18 E-value=1.9 Score=49.17 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.3
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|+.+++.|++|+|||||..
T Consensus 605 ~~g~i~~ItGpNGsGKSTlLr 625 (800)
T 1wb9_A 605 PQRRMLIITGPNMGGKSTYMR 625 (800)
T ss_dssp SSSCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCChHHHHH
Confidence 567899999999999999654
No 482
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=66.85 E-value=1.6 Score=46.77 Aligned_cols=18 Identities=33% Similarity=0.601 Sum_probs=15.7
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|+|++|||||||+.
T Consensus 51 ~~iLl~GppGtGKT~lar 68 (444)
T 1g41_A 51 KNILMIGPTGVGKTEIAR 68 (444)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred ceEEEEcCCCCCHHHHHH
Confidence 459999999999999764
No 483
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=66.35 E-value=1.8 Score=41.02 Aligned_cols=18 Identities=39% Similarity=0.488 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++|.|++|+|||+|..
T Consensus 14 ~KivlvGd~~VGKTsLi~ 31 (216)
T 4dkx_A 14 FKLVFLGEQSVGKTSLIT 31 (216)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred EEEEEECcCCcCHHHHHH
Confidence 359999999999999775
No 484
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=65.81 E-value=1.3 Score=44.05 Aligned_cols=19 Identities=37% Similarity=0.573 Sum_probs=15.7
Q ss_pred CCEEEE--EeCCCCCcccccc
Q 008519 334 GDVALF--FGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lf--FGLSGTGKTTLsa 352 (563)
+..+++ .|++|+|||||..
T Consensus 50 ~~~~li~i~G~~G~GKT~L~~ 70 (412)
T 1w5s_A 50 DVNMIYGSIGRVGIGKTTLAK 70 (412)
T ss_dssp CEEEEEECTTCCSSSHHHHHH
T ss_pred CCEEEEeCcCcCCCCHHHHHH
Confidence 446777 9999999999765
No 485
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=65.46 E-value=1.9 Score=49.49 Aligned_cols=19 Identities=37% Similarity=0.590 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
-+.++|+|++|||||+|+.
T Consensus 238 p~GILL~GPPGTGKT~LAr 256 (806)
T 3cf2_A 238 PRGILLYGPPGTGKTLIAR 256 (806)
T ss_dssp CCEEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 3579999999999999765
No 486
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=65.39 E-value=1.9 Score=44.56 Aligned_cols=19 Identities=42% Similarity=0.719 Sum_probs=15.9
Q ss_pred CCCCEEEEEeCCCCCccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLS 351 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLs 351 (563)
..| ..+|+|++|+|||||.
T Consensus 25 ~~g-~~~i~G~nG~GKttll 43 (359)
T 2o5v_A 25 PEG-VTGIYGENGAGKTNLL 43 (359)
T ss_dssp CSE-EEEEECCTTSSHHHHH
T ss_pred cCC-eEEEECCCCCChhHHH
Confidence 345 8999999999999943
No 487
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=65.24 E-value=1.3 Score=48.63 Aligned_cols=16 Identities=19% Similarity=0.339 Sum_probs=14.3
Q ss_pred EEEEeCCCCCcccccc
Q 008519 337 ALFFGLSGTGKTTLST 352 (563)
Q Consensus 337 ~lfFGLSGTGKTTLsa 352 (563)
+++.|+||+|||||..
T Consensus 48 iaIvG~nGsGKSTLL~ 63 (608)
T 3szr_A 48 IAVIGDQSSGKSSVLE 63 (608)
T ss_dssp EECCCCTTSCHHHHHH
T ss_pred EEEECCCCChHHHHHH
Confidence 8999999999999654
No 488
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=65.14 E-value=2.1 Score=41.53 Aligned_cols=17 Identities=29% Similarity=0.360 Sum_probs=15.3
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+|+|||||..
T Consensus 7 kI~lvG~~nvGKTsL~n 23 (258)
T 3a1s_A 7 KVALAGCPNVGKTSLFN 23 (258)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999765
No 489
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=65.09 E-value=1.9 Score=43.84 Aligned_cols=19 Identities=16% Similarity=0.209 Sum_probs=15.7
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
+..++++|.||+|||||..
T Consensus 35 ~~~~~i~G~~G~GKs~~~~ 53 (392)
T 4ag6_A 35 NSNWTILAKPGAGKSFTAK 53 (392)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred cCceEEEcCCCCCHHHHHH
Confidence 3458899999999999765
No 490
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=64.89 E-value=1.6 Score=44.64 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=15.0
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.+++.|.+|+|||||..
T Consensus 39 ~I~vvG~~g~GKSTLln 55 (361)
T 2qag_A 39 TLMVVGESGLGKSTLIN 55 (361)
T ss_dssp CEEECCCTTSCHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 48999999999999765
No 491
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=64.89 E-value=2.1 Score=50.14 Aligned_cols=21 Identities=38% Similarity=0.529 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..++|.|+||+|||||..
T Consensus 666 ~~GeivaI~G~nGSGKSTLl~ 686 (993)
T 2ygr_A 666 PLGVLTSVTGVSGSGKSTLVN 686 (993)
T ss_dssp ESSSEEEEECSTTSSHHHHHT
T ss_pred CCCCEEEEEcCCCCCHHHHHH
Confidence 458899999999999999765
No 492
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=64.80 E-value=1.9 Score=42.75 Aligned_cols=18 Identities=33% Similarity=0.682 Sum_probs=15.8
Q ss_pred CEEEEEeCCCCCcccccc
Q 008519 335 DVALFFGLSGTGKTTLST 352 (563)
Q Consensus 335 ~v~lfFGLSGTGKTTLsa 352 (563)
..++++|++|+|||||..
T Consensus 4 ~KI~lvG~~~vGKSSLi~ 21 (307)
T 3r7w_A 4 SKLLLMGRSGSGKSSMRS 21 (307)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 493
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=64.75 E-value=2.2 Score=42.35 Aligned_cols=17 Identities=29% Similarity=0.405 Sum_probs=15.5
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|.|.+|+|||||..
T Consensus 10 ~VaIvG~~nvGKSTLln 26 (301)
T 1ega_A 10 FIAIVGRPNVGKSTLLN 26 (301)
T ss_dssp EEEEECSSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 69999999999999776
No 494
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=64.60 E-value=1.9 Score=47.98 Aligned_cols=17 Identities=41% Similarity=0.745 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCcccccc
Q 008519 336 VALFFGLSGTGKTTLST 352 (563)
Q Consensus 336 v~lfFGLSGTGKTTLsa 352 (563)
.++|+|++|||||+|+.
T Consensus 523 ~~Ll~Gp~GtGKT~lA~ 539 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELAR 539 (758)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 69999999999999765
No 495
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=64.60 E-value=2.2 Score=48.54 Aligned_cols=19 Identities=26% Similarity=0.384 Sum_probs=17.2
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
|+.+++.|++|+|||||..
T Consensus 576 g~i~~I~GpNGsGKSTlLr 594 (765)
T 1ewq_A 576 HELVLITGPNMAGKSTFLR 594 (765)
T ss_dssp SCEEEEESCSSSSHHHHHH
T ss_pred CcEEEEECCCCCChHHHHH
Confidence 8899999999999999654
No 496
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=64.45 E-value=1.9 Score=45.57 Aligned_cols=19 Identities=47% Similarity=0.588 Sum_probs=16.5
Q ss_pred CCEEEEEeCCCCCcccccc
Q 008519 334 GDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 334 G~v~lfFGLSGTGKTTLsa 352 (563)
..+++|.|.+|+||||+++
T Consensus 100 ~~vI~ivG~~GvGKTT~a~ 118 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVG 118 (433)
T ss_dssp SEEEEEECSTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4689999999999999776
No 497
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=64.09 E-value=2.6 Score=42.64 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
...+++|+|.+|+|||||..
T Consensus 166 ~~~~v~lvG~~gvGKSTLin 185 (357)
T 2e87_A 166 EIPTVVIAGHPNVGKSTLLK 185 (357)
T ss_dssp SSCEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 44689999999999999765
No 498
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=63.90 E-value=2.4 Score=42.76 Aligned_cols=21 Identities=24% Similarity=0.205 Sum_probs=17.9
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..+.+++|.|..|+|||||..
T Consensus 54 ~~~~~i~i~G~~g~GKSTl~~ 74 (341)
T 2p67_A 54 GNTLRLGVTGTPGAGKSTFLE 74 (341)
T ss_dssp SCSEEEEEEECTTSCHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHH
Confidence 456789999999999999765
No 499
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=63.80 E-value=2.1 Score=41.48 Aligned_cols=21 Identities=29% Similarity=0.167 Sum_probs=16.8
Q ss_pred CCCCEEEEEeCCCCCcccccc
Q 008519 332 KDGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 332 ~~G~v~lfFGLSGTGKTTLsa 352 (563)
..|..+++.|+.|+||||+..
T Consensus 10 ~~G~i~litG~mGsGKTT~ll 30 (223)
T 2b8t_A 10 KIGWIEFITGPMFAGKTAELI 30 (223)
T ss_dssp -CCEEEEEECSTTSCHHHHHH
T ss_pred CCcEEEEEECCCCCcHHHHHH
Confidence 346789999999999999543
No 500
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=63.76 E-value=2.4 Score=43.88 Aligned_cols=20 Identities=35% Similarity=0.591 Sum_probs=17.5
Q ss_pred CCCEEEEEeCCCCCcccccc
Q 008519 333 DGDVALFFGLSGTGKTTLST 352 (563)
Q Consensus 333 ~G~v~lfFGLSGTGKTTLsa 352 (563)
.|+.++|+|.+|+|||||+.
T Consensus 73 ~G~li~I~G~pGsGKTtlal 92 (366)
T 1xp8_A 73 RGRITEIYGPESGGKTTLAL 92 (366)
T ss_dssp TTSEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCChHHHHH
Confidence 46789999999999999765
Done!