Your job contains 1 sequence.
>008521
MQPLFNAFANQTQSNSSTSTLPQMQAFRPNMLQNSVPMQPQTGIMNPQVPFPLSNSNMPA
TAPLMNQNNFMNASNPLLIAQSNHLGLPQLGHMFPVHGNFGNMPLNVSQGQLLGPNLSNL
PQQFNQNMGFSNGQMCLQSVNQLLSMQMSNPCLFGNPQFGLVNQNQQNFVQPIKDVSGNN
TLKSCSSEPRQGQNLQPSAFMRSQRNFIQNGQGSISKSNSKKVSGKNFIKNRTKEFSQGF
QKSHFHQMHNGKRKFGFYNDQKPKGHGNGKAIKFGLANQMNQPQEKKRKSLALTYTEQEV
KQWCEERRKNYPTKANINKKLTEKQSNSDVIDKEAKMRREQLKEILAKQAELGVEVAEIP
SYYLLDSKKQVRARVENTMPLNKRGRFQNNYDKRGRYKRKDQFSKEQKLADKDSSNTSSF
NKKKPTLLQKLLSADVKRDKSHLLQTFRFMAINSFFKDWPEKPVNFPLVMVKDGGAAGEV
VEEKSLLLGEEDSEGKGRRMVEHFEHDENRERMHHNIQGFEDENDDEEEDNDNGEQMKVY
IAGKGNTNDEHVRLEEEEGEIID
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008521
(563 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146238 - symbol:NUFIP "AT5G18440" species:370... 683 3.1e-67 1
ZFIN|ZDB-GENE-030131-6203 - symbol:zgc:171476 "zgc:171476... 100 1.8e-05 2
RGD|1359440 - symbol:Nufip1 "nuclear fragile X mental ret... 106 2.1e-05 2
UNIPROTKB|Q9UHK0 - symbol:NUFIP1 "Nuclear fragile X menta... 100 2.4e-05 2
UNIPROTKB|J9P0P5 - symbol:NUFIP1 "Uncharacterized protein... 100 7.5e-05 2
UNIPROTKB|F1PK39 - symbol:NUFIP1 "Uncharacterized protein... 100 7.6e-05 2
UNIPROTKB|F1RJZ3 - symbol:NUFIP1 "Uncharacterized protein... 101 7.7e-05 2
UNIPROTKB|E1C0G7 - symbol:NUFIP1 "Uncharacterized protein... 88 0.00013 2
UNIPROTKB|E1C0G8 - symbol:NUFIP1 "Uncharacterized protein... 88 0.00021 2
UNIPROTKB|F1NXC7 - symbol:NUFIP1 "Uncharacterized protein... 88 0.00025 2
>TAIR|locus:2146238 [details] [associations]
symbol:NUFIP "AT5G18440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000491
"small nucleolar ribonucleoprotein complex assembly" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0048046 "apoplast"
evidence=IDA] GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0048046 InterPro:IPR019496 Pfam:PF10453 EMBL:AY924837
EMBL:DQ132725 EMBL:DQ132726 IPI:IPI00537857 RefSeq:NP_001078603.1
RefSeq:NP_197345.2 UniGene:At.66726 IntAct:Q5BPJ1 PRIDE:Q5BPJ1
EnsemblPlants:AT5G18440.1 EnsemblPlants:AT5G18440.2 GeneID:831962
KEGG:ath:AT5G18440 TAIR:At5g18440 HOGENOM:HOG000210021
InParanoid:Q5BPJ1 OMA:HINQLLP PhylomeDB:Q5BPJ1
ProtClustDB:CLSN2699116 Genevestigator:Q5BPJ1 GO:GO:0000491
Uniprot:Q5BPJ1
Length = 470
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 186/462 (40%), Positives = 251/462 (54%)
Query: 52 PLSNSNMPATAPLMNQNNFMNASNPLLIAQSNHLGLPQLGHMFPVHGN-FGNMPLNVSQG 110
P NS P P Q+ + SNH G+ P++ N G M +
Sbjct: 3 PPYNSFQPQARPYRPQHQLQQQQQ--INGFSNHQQQQHNGYQNPMNANQLGMMNPQMMNN 60
Query: 111 QLLGPNLS--NLP--QQFNQNMGFSNGQMCLQS-VNQLLSMQMSNPCLFGNPQFGLVNQN 165
++G N+ N+P QF NM Q + + +NQLL P L GN QF + N N
Sbjct: 61 PMMGHNMPMPNMPIHPQFFNNMPQQLPQFAMPNHINQLL------PNLLGNLQFAVANSN 114
Query: 166 QQ-----NFVQPIKD---VSGNNTLKSCSS-----EPRQGQNLQ--PSAFM--RSQRNFI 208
NF QP + S L S +S P QN Q P F R Q +
Sbjct: 115 LMGHSLPNFFQPSLEPHAFSSRPQLNSFNSLPYPPVPNPHQNHQSGPPGFSEPRPQGQSV 174
Query: 209 QNGQXXXXXXXXXXXXXXXFIKNRT-KEFSQGFQKSHFHQMHNGKRKFGFYNDQKPKGHG 267
N F K++ K QGFQ+ HQ NGKRK GF D + G G
Sbjct: 175 DN---TNGSGPNGNDFRNKFPKHQNFKGPGQGFQRPQLHQADNGKRKSGFNKDHR--GKG 229
Query: 268 NGKAIKFGL--ANQMNQPQEKKRKSLALTYTEQEVKQWCEERRKNYPTKANINKKLTEKQ 325
N +K GL ++ N +EKKR S AL YT +EV+QW E RRKNYPTK + KK+ +K
Sbjct: 230 NNNKMKTGLDGSDTGNIAKEKKR-SYALMYTPREVQQWREARRKNYPTKFLVEKKV-KKN 287
Query: 326 SNSDVIDKEAKMRREQLKEILAKQAELGVEVAEIPSYYLLDSKKQVRARVENTMPLNKRG 385
++ ++D+EAKMRR+QL+E+LAKQAELGVEVAE+PS+YL ++ +QV N ++G
Sbjct: 288 VSASILDEEAKMRRQQLREVLAKQAELGVEVAEVPSHYLSNNDEQVNGDRGNNN--GRKG 345
Query: 386 RFQNNYDKRGRYKRKDQF-SKEQKLADKDSSNTSSFNKKKPTLLQKLLSADVKRDKSHLL 444
RFQNN + R+ RKD+F +K+ +L DK SS SS +KPTLL+KLLSAD+KRDKS LL
Sbjct: 346 RFQNNRRNKRRHDRKDKFDNKKPRLEDKKSSQDSSITTRKPTLLEKLLSADIKRDKSQLL 405
Query: 445 QTFRFMAINSFFKDWPEKPVNFPLVMVKDGGAAGEVVEEKSL 486
Q FRFM +NS K++PE+P+ PL+ VK+ G + +E+ S+
Sbjct: 406 QVFRFMVMNSLLKEFPEQPLKLPLITVKETGCE-DAMEDPSI 446
>ZFIN|ZDB-GENE-030131-6203 [details] [associations]
symbol:zgc:171476 "zgc:171476" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 ZFIN:ZDB-GENE-030131-6203
GO:GO:0008270 GO:GO:0005622 eggNOG:NOG73405 HOGENOM:HOG000113888
OrthoDB:EOG412M64 InterPro:IPR019496 Pfam:PF10453 EMBL:BC153934
IPI:IPI00877545 RefSeq:NP_001108358.1 UniGene:Dr.79281
GeneID:334271 KEGG:dre:334271 HOVERGEN:HBG099894 NextBio:20810330
ArrayExpress:A8KB24 Uniprot:A8KB24
Length = 406
Score = 100 (40.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 296 TEQEVKQWCEERRKNYPTKANINKK--LTE-KQSNSDVID 332
TE+++++W EERR+NYPT N+ KK L E K+ DV++
Sbjct: 143 TEEDIRRWREERRRNYPTLRNVEKKQKLMEVKEQRGDVLE 182
Score = 77 (32.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 422 KKKPTLLQKLLSADVKRDKSHLLQTFRFMAINSFF 456
++ PTLL+ LL+ D++ +++ +LQ RF+ N FF
Sbjct: 345 RQPPTLLEMLLAPDIRHERNVVLQCVRFIIRNRFF 379
>RGD|1359440 [details] [associations]
symbol:Nufip1 "nuclear fragile X mental retardation protein
interacting protein 1" species:10116 "Rattus norvegicus"
[GO:0000492 "box C/D snoRNP assembly" evidence=IEA;ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005726 "perichromatin fibrils" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008023 "transcription elongation
factor complex" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA;ISO]
[GO:0022626 "cytosolic ribosome" evidence=IEA;ISO] [GO:0030515
"snoRNA binding" evidence=IEA;ISO] [GO:0030674 "protein binding,
bridging" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048786
"presynaptic active zone" evidence=IEA;ISO] [GO:0070761 "pre-snoRNP
complex" evidence=IEA;ISO] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 RGD:1359440
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030515
GO:GO:0045944 GO:GO:0048786 GO:GO:0016363 GO:GO:0022626
GO:GO:0070761 GO:GO:0000492 GO:GO:0008023 CTD:26747 eggNOG:NOG73405
HOGENOM:HOG000113888 HOVERGEN:HBG059841 OMA:MAKIRSP
OrthoDB:EOG412M64 GO:GO:0005726 InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:BC082111 IPI:IPI00189051
RefSeq:NP_001007759.1 UniGene:Rn.154742 STRING:Q641W3 PRIDE:Q641W3
Ensembl:ENSRNOT00000001366 GeneID:364430 KEGG:rno:364430
UCSC:RGD:1359440 InParanoid:Q641W3 NextBio:685397
Genevestigator:Q641W3 GermOnline:ENSRNOG00000001033 Uniprot:Q641W3
Length = 486
Score = 106 (42.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 238 QGFQKSHFHQMHNGKRKFGFYNDQKPKGHGNGKAIKFGLANQMNQPQEKKRKSLALTYTE 297
+GF+ + +H + K D H K ++F N M+ P KK K T
Sbjct: 174 RGFKNQEKYDIHMSEHKKCPEVDCSFSAHE--KIVQFHWRN-MHAPGMKKIK----LDTP 226
Query: 298 QEVKQWCEERRKNYPTKANIN-KKLT--EKQSNSDVI 331
+++ +W EERRKNYPT ANI KKL EK+ +V+
Sbjct: 227 EDIARWREERRKNYPTLANIERKKLLQLEKEKRGEVL 263
Score = 72 (30.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 312 PTKANINKK--LTEKQSNSDVIDKEAK--MRREQLKEILAKQAELG-VEVAEI-PSYYLL 365
PTK N++ L S SD +K + + +E + + + G V +E P +
Sbjct: 317 PTKVNVDPLGVLIHSDSESDKDEKSQRAIVPKEVTPALCSLMSSYGNVSGSESEPEEAPI 376
Query: 366 DSKKQVRA--RV-ENTMPLNKRGRFQNNYDKRGRYKRKDQFSKEQK--LADKDSSNTSSF 420
++ +V A RV ++ P + R + R K K Q S +K L K S F
Sbjct: 377 KTEAEVLAENRVLPSSPPKSPRHNVRTTARTVLRAKWKAQRSGLRKITLKQKKSPCHPLF 436
Query: 421 NKKK--PTLLQKLLSADVKRDKSHLLQTFRFMAINSFF 456
+ P LL+ LL+ D++ +++ +LQ R++ FF
Sbjct: 437 EPRTRHPHLLEMLLAPDIRHERNVILQCVRYIIKKDFF 474
>UNIPROTKB|Q9UHK0 [details] [associations]
symbol:NUFIP1 "Nuclear fragile X mental
retardation-interacting protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0048786 "presynaptic
active zone" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0008023 "transcription elongation factor complex" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000492 "box C/D snoRNP
assembly" evidence=IMP] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0030515 "snoRNA binding" evidence=IDA] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0048786
GO:GO:0003723 GO:GO:0006396 GO:GO:0016363 GO:GO:0022626
GO:GO:0070761 GO:GO:0000492 InterPro:IPR022755 Pfam:PF12171
GO:GO:0008023 EMBL:AF159548 EMBL:AL354816 EMBL:AL359706
EMBL:BC017745 IPI:IPI00017630 RefSeq:NP_036477.2 UniGene:Hs.525006
ProteinModelPortal:Q9UHK0 DIP:DIP-41010N IntAct:Q9UHK0
MINT:MINT-110099 STRING:Q9UHK0 DMDM:134047852 PaxDb:Q9UHK0
PRIDE:Q9UHK0 DNASU:26747 Ensembl:ENST00000379161 GeneID:26747
KEGG:hsa:26747 UCSC:uc001uzp.2 CTD:26747 GeneCards:GC13M045513
H-InvDB:HIX0011282 HGNC:HGNC:8057 HPA:HPA029958 HPA:HPA029959
HPA:HPA029960 MIM:604354 neXtProt:NX_Q9UHK0 PharmGKB:PA31843
eggNOG:NOG73405 HOGENOM:HOG000113888 HOVERGEN:HBG059841
InParanoid:Q9UHK0 OMA:MAKIRSP OrthoDB:EOG412M64 PhylomeDB:Q9UHK0
GenomeRNAi:26747 NextBio:49103 Bgee:Q9UHK0 CleanEx:HS_NUFIP1
Genevestigator:Q9UHK0 GermOnline:ENSG00000083635 GO:GO:0005726
InterPro:IPR019496 Pfam:PF10453 Uniprot:Q9UHK0
Length = 495
Score = 100 (40.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/65 (44%), Positives = 37/65 (56%)
Query: 270 KAIKFGLANQMNQPQEKKRKSLALTYTEQEVKQWCEERRKNYPTKANIN--KKLT-EKQS 326
K ++F N M+ P KK K T +E+ +W EERRKNYPT ANI KKL EK+
Sbjct: 211 KIVQFHWRN-MHAPGMKKIK----LDTPEEIARWREERRKNYPTLANIERKKKLKLEKEK 265
Query: 327 NSDVI 331
V+
Sbjct: 266 RGAVL 270
Score = 78 (32.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 390 NYDKRGRYKRKDQFSKEQKLADKDSSNTSSFNKKK---PTLLQKLLSADVKRDKSHLLQT 446
N+ + RK F K KD N + + + P LL+ LL+ D++ +++ +LQ
Sbjct: 414 NFSEAKSENRKKSFEKTNPKRKKDYHNYQTLFEPRTHHPYLLEMLLAPDIRHERNVILQC 473
Query: 447 FRFMAINSFF 456
R++ FF
Sbjct: 474 VRYIIKKDFF 483
>UNIPROTKB|J9P0P5 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 CTD:26747 InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:AAEX03013151 RefSeq:XP_542577.1
Ensembl:ENSCAFT00000048262 GeneID:485458 KEGG:cfa:485458
Uniprot:J9P0P5
Length = 487
Score = 100 (40.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 29/65 (44%), Positives = 37/65 (56%)
Query: 270 KAIKFGLANQMNQPQEKKRKSLALTYTEQEVKQWCEERRKNYPTKANIN--KKLT-EKQS 326
K ++F N M+ P KK K T +E+ +W EERRKNYPT ANI KKL EK+
Sbjct: 208 KIVQFHWRN-MHAPGMKKIK----LDTPEEIARWREERRKNYPTLANIERKKKLKLEKEK 262
Query: 327 NSDVI 331
V+
Sbjct: 263 RGAVL 267
Score = 73 (30.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/139 (23%), Positives = 59/139 (42%)
Query: 323 EKQSNSDVIDKEAKMRREQLKEILAKQAELGVEVAEIPSYYLLDSKKQVRARVENTMPLN 382
E++ S VI KE L +++ L +E P + ++ + E + N
Sbjct: 342 EEKPQSTVIPKEVT---PALCSLMSSYGSLSGSESE-PEEAPIKTEADILVEDE-VLHNN 396
Query: 383 KRGRFQNNYDKRGRYKR--KDQFSKEQKLADKDSSNTSSFNKKK---PTLLQKLLSADVK 437
R +NN + R K F K KD N + + + P LL+ LL+ D++
Sbjct: 397 TPKRSRNNVKVTVKNYRSPKKSFKKTNPKRKKDYHNYHTLFEPRTHHPYLLEMLLAPDIR 456
Query: 438 RDKSHLLQTFRFMAINSFF 456
+++ +LQ R++ FF
Sbjct: 457 HERNVILQCVRYIIKKDFF 475
>UNIPROTKB|F1PK39 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 OMA:MAKIRSP InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:AAEX03013151
Ensembl:ENSCAFT00000007349 Uniprot:F1PK39
Length = 488
Score = 100 (40.3 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 29/65 (44%), Positives = 37/65 (56%)
Query: 270 KAIKFGLANQMNQPQEKKRKSLALTYTEQEVKQWCEERRKNYPTKANIN--KKLT-EKQS 326
K ++F N M+ P KK K T +E+ +W EERRKNYPT ANI KKL EK+
Sbjct: 209 KIVQFHWRN-MHAPGMKKIK----LDTPEEIARWREERRKNYPTLANIERKKKLKLEKEK 263
Query: 327 NSDVI 331
V+
Sbjct: 264 RGAVL 268
Score = 73 (30.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/139 (23%), Positives = 59/139 (42%)
Query: 323 EKQSNSDVIDKEAKMRREQLKEILAKQAELGVEVAEIPSYYLLDSKKQVRARVENTMPLN 382
E++ S VI KE L +++ L +E P + ++ + E + N
Sbjct: 343 EEKPQSTVIPKEVT---PALCSLMSSYGSLSGSESE-PEEAPIKTEADILVEDE-VLHNN 397
Query: 383 KRGRFQNNYDKRGRYKR--KDQFSKEQKLADKDSSNTSSFNKKK---PTLLQKLLSADVK 437
R +NN + R K F K KD N + + + P LL+ LL+ D++
Sbjct: 398 TPKRSRNNVKVTVKNYRSPKKSFKKTNPKRKKDYHNYHTLFEPRTHHPYLLEMLLAPDIR 457
Query: 438 RDKSHLLQTFRFMAINSFF 456
+++ +LQ R++ FF
Sbjct: 458 HERNVILQCVRYIIKKDFF 476
>UNIPROTKB|F1RJZ3 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0048786
"presynaptic active zone" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0000492 "box C/D snoRNP assembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005730 GO:GO:0008270
GO:GO:0030515 GO:GO:0045944 GO:GO:0048786 GO:GO:0016363
GO:GO:0022626 GO:GO:0070761 GO:GO:0000492 GO:GO:0008023 CTD:26747
OMA:MAKIRSP GO:GO:0005726 InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:CU928345 RefSeq:XP_001927460.2
UniGene:Ssc.88023 Ensembl:ENSSSCT00000010322 GeneID:100157882
KEGG:ssc:100157882 Uniprot:F1RJZ3
Length = 494
Score = 101 (40.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 270 KAIKFGLANQMNQPQEKKRKSLALTYTEQEVKQWCEERRKNYPTKANIN--KKLT-EKQS 326
K ++F N M+ P KK K T +E+ +W EERRKNYPT ANI KKL EK+
Sbjct: 210 KIVQFHWRN-MHAPGVKKIK----LDTPEEIARWREERRKNYPTLANIERKKKLKLEKEK 264
Query: 327 NSDVI 331
+ V+
Sbjct: 265 SGAVL 269
Score = 72 (30.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 390 NYDKRGRYKR-KDQFSKEQKLADKDSSNTSSFNKKK---PTLLQKLLSADVKRDKSHLLQ 445
N+ + +Y+R K F K K+ N + + + P LL+ LL+ D++ +++ +LQ
Sbjct: 413 NFSE-AKYERQKKNFKKTDPKKKKNHHNYQTLFEPRTHHPYLLEMLLAPDIRHERNVILQ 471
Query: 446 TFRFMAINSFF 456
R++ FF
Sbjct: 472 CVRYIIKKDFF 482
>UNIPROTKB|E1C0G7 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:AADN02005450 IPI:IPI00820713
Ensembl:ENSGALT00000036491 ArrayExpress:E1C0G7 Uniprot:E1C0G7
Length = 360
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 298 QEVKQWCEERRKNYPTKANINKKLT---EKQSNSDVI 331
+E+ +W EER+KN+PT ANI KK EK+ +V+
Sbjct: 82 EEIARWREERKKNFPTLANIEKKKVMQMEKEERGEVL 118
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 408 KLADKDSSNTSSF-NKKKPTLLQKLLSADVKRDKSHLLQTFRFMAINSFF 456
++ DK + T K++PTLL+ LL+ D++ +++ +LQ R++ N F
Sbjct: 298 RVPDKRAKRTLPLLPKRRPTLLEMLLAQDIRHERNVILQCVRYIVRNDVF 347
>UNIPROTKB|E1C0G8 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 InterPro:IPR019496 Pfam:PF10453
GeneTree:ENSGT00390000003758 EMBL:AADN02005450 IPI:IPI00822445
Ensembl:ENSGALT00000036490 ArrayExpress:E1C0G8 Uniprot:E1C0G8
Length = 434
Score = 88 (36.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 298 QEVKQWCEERRKNYPTKANINKKLT---EKQSNSDVI 331
+E+ +W EER+KN+PT ANI KK EK+ +V+
Sbjct: 82 EEIARWREERKKNFPTLANIEKKKVMQMEKEERGEVL 118
Score = 80 (33.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 408 KLADKDSSNTSSF-NKKKPTLLQKLLSADVKRDKSHLLQTFRFMAINSFF 456
++ DK + T K++PTLL+ LL+ D++ +++ +LQ R++ N F
Sbjct: 304 RVPDKRAKRTLPLLPKRRPTLLEMLLAQDIRHERNVILQCVRYIVRNDVF 353
>UNIPROTKB|F1NXC7 [details] [associations]
symbol:NUFIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000492 "box C/D snoRNP assembly" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048786 "presynaptic
active zone" evidence=IEA] [GO:0070761 "pre-snoRNP complex"
evidence=IEA] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
SMART:SM00355 GO:GO:0005730 GO:GO:0008270 GO:GO:0030515
GO:GO:0045944 GO:GO:0048786 GO:GO:0016363 GO:GO:0022626
GO:GO:0070761 GO:GO:0000492 GO:GO:0008023 GO:GO:0005726
InterPro:IPR019496 Pfam:PF10453 GeneTree:ENSGT00390000003758
EMBL:AADN02005450 IPI:IPI00572944 Ensembl:ENSGALT00000027424
OMA:ERHIEAN ArrayExpress:F1NXC7 Uniprot:F1NXC7
Length = 464
Score = 88 (36.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 298 QEVKQWCEERRKNYPTKANINKKLT---EKQSNSDVI 331
+E+ +W EER+KN+PT ANI KK EK+ +V+
Sbjct: 101 EEIARWREERKKNFPTLANIEKKKVMQMEKEERGEVL 137
Score = 80 (33.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 408 KLADKDSSNTSSF-NKKKPTLLQKLLSADVKRDKSHLLQTFRFMAINSFF 456
++ DK + T K++PTLL+ LL+ D++ +++ +LQ R++ N F
Sbjct: 329 RVPDKRAKRTLPLLPKRRPTLLEMLLAQDIRHERNVILQCVRYIVRNDVF 378
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 563 524 0.00090 119 3 11 23 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 605 (64 KB)
Total size of DFA: 288 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.68u 0.38s 58.06t Elapsed: 00:00:03
Total cpu time: 57.68u 0.38s 58.06t Elapsed: 00:00:03
Start: Tue May 21 09:35:00 2013 End: Tue May 21 09:35:03 2013