BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008533
(562 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0U4|TNPO1_ARATH Transportin-1 OS=Arabidopsis thaliana GN=TRN1 PE=1 SV=1
Length = 891
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/556 (79%), Positives = 500/556 (89%)
Query: 2 ATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAE 61
AT+V WQP++ G EIC LLEQQISPSS DKSQIW+QLQ +SQFPDFNNYL FIL RAE
Sbjct: 3 ATAVVWQPRDDGLAEICSLLEQQISPSSVVDKSQIWKQLQHFSQFPDFNNYLVFILVRAE 62
Query: 62 GKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVV 121
GKSVE+RQAAGLLLKNNLR AY SM+ NQ+YIKSELLPCLGAADR+IR+TVGTI+SV+V
Sbjct: 63 GKSVEVRQAAGLLLKNNLRGAYPSMTQENQKYIKSELLPCLGAADRNIRTTVGTIISVIV 122
Query: 122 QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIF 181
+ G++GW ELL ALVTCLDSND+NHM+GAMDALSKICEDIP VLD++VPGLAE PINIF
Sbjct: 123 NIEGVSGWHELLPALVTCLDSNDLNHMDGAMDALSKICEDIPHVLDTEVPGLAERPINIF 182
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLV 241
LPRLLQFFQSPH SLRKL+LGSVNQ+I++MP+AL+ S+D+YLQGLF+L+NDP EVRKLV
Sbjct: 183 LPRLLQFFQSPHASLRKLALGSVNQYIIIMPAALYNSLDKYLQGLFVLANDPVPEVRKLV 242
Query: 242 CAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKE 301
CAAF L EV PS +EPHLRN+ EYMLQVN+D D++V+LEACEFW +Y +AQLP ENLKE
Sbjct: 243 CAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFWSAYCDAQLPPENLKE 302
Query: 302 FLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDI 361
FLPRL+PVLL NM YADDDESL++AEEDES PDRDQDLKPRFH+SRLHGSE+ +DDDDD
Sbjct: 303 FLPRLIPVLLENMAYADDDESLLDAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDDDS 362
Query: 362 VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE 421
NVWNLRKCSAAA+DVLSNVFGDEILP LMP+IQ LSASGDEAWK REAAVLALGAIAE
Sbjct: 363 FNVWNLRKCSAAAIDVLSNVFGDEILPALMPLIQKNLSASGDEAWKQREAAVLALGAIAE 422
Query: 422 GCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVL 481
GC+ GLYPHLSEIVAFL+PLLDDKFPLIRSISCWTLSRF K+++Q+ G+ G EQFEKVL
Sbjct: 423 GCMNGLYPHLSEIVAFLLPLLDDKFPLIRSISCWTLSRFGKYLIQESGNPKGYEQFEKVL 482
Query: 482 MGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQRRNLRIVY 541
MGLL+R+LDTNKRVQEAACSAFAT+EE+AAEEL P L +ILQHLM AFGKYQRRNLRIVY
Sbjct: 483 MGLLRRLLDTNKRVQEAACSAFATVEEDAAEELVPHLGVILQHLMCAFGKYQRRNLRIVY 542
Query: 542 DAIGTLADAVGFELNQ 557
DAIGTLAD+V ELN+
Sbjct: 543 DAIGTLADSVREELNK 558
>sp|B8ARW2|TNPO1_ORYSI Transportin-1 OS=Oryza sativa subsp. indica GN=OsI_18044 PE=2 SV=1
Length = 890
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/558 (73%), Positives = 485/558 (86%), Gaps = 3/558 (0%)
Query: 1 MATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARA 60
MA + WQPQE+G EIC LL+ ISP+S D+++IWQQLQ YSQFPDFNNYL F+LAR
Sbjct: 1 MAAAALWQPQEEGLREICTLLDAHISPNS--DQARIWQQLQHYSQFPDFNNYLVFLLARG 58
Query: 61 EGKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVV 120
EGKS E RQAAGLLLKNNLR + SM P++QQY+KSELLPC+GA ++ IRSTVGT++SV+
Sbjct: 59 EGKSFEARQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVL 118
Query: 121 VQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINI 180
Q+ +AGW+EL QAL CLDSND++HMEGAMDA+ KICED+P+ LD DVPGL E PIN+
Sbjct: 119 FQIVRVAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLPERPINV 178
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKL 240
F+PRLLQFFQS H LRKL+LG +NQ+I++MP+AL++SMDQYLQGLF L+ DPSA+VRKL
Sbjct: 179 FMPRLLQFFQSTHAILRKLALGCINQYIVVMPAALYMSMDQYLQGLFNLAKDPSADVRKL 238
Query: 241 VCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLK 300
VC+A+ LIEVRPS LEPHL+N+ E MLQ NKD+DD+VALEACEFW +Y + +P E L+
Sbjct: 239 VCSAWVQLIEVRPSILEPHLKNVTELMLQANKDSDDEVALEACEFWSAYCDVSMPPEGLR 298
Query: 301 EFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDD 360
EFLPRL+P LLSNM Y+DDDESL +AEE+ES PDRDQDLKPRFH+SRLHGSE EDDDDD
Sbjct: 299 EFLPRLIPTLLSNMSYSDDDESLADAEEEESFPDRDQDLKPRFHASRLHGSETGEDDDDD 358
Query: 361 I-VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAI 419
VNVWNLRKCSAA LDVLSNVFGD+ILPTLMP+IQ L+ + D+AWK+REAAVL++GAI
Sbjct: 359 DAVNVWNLRKCSAAGLDVLSNVFGDDILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAI 418
Query: 420 AEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEK 479
AEGCI GLYPHL +IVAFLIPLLDDKFPLIRSI+CWTLSR+SKFIVQ + H NGREQF+K
Sbjct: 419 AEGCITGLYPHLPQIVAFLIPLLDDKFPLIRSITCWTLSRYSKFIVQSLEHPNGREQFDK 478
Query: 480 VLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQRRNLRI 539
+L+GLL+R+LDTNKRVQEAACSAFATLEEEAAEEL P L IILQHLM A+GKYQRRNLRI
Sbjct: 479 ILLGLLRRVLDTNKRVQEAACSAFATLEEEAAEELVPHLGIILQHLMCAYGKYQRRNLRI 538
Query: 540 VYDAIGTLADAVGFELNQ 557
+YDA+GTLADAVG ELNQ
Sbjct: 539 LYDALGTLADAVGAELNQ 556
>sp|B9FDR3|TNPO1_ORYSJ Transportin-1 OS=Oryza sativa subsp. japonica GN=TRN1 PE=3 SV=2
Length = 891
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/557 (73%), Positives = 484/557 (86%), Gaps = 3/557 (0%)
Query: 2 ATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAE 61
A + WQPQE+G EIC LL+ ISP+S D+++IWQQLQ YSQFPDFNNYL F+LAR E
Sbjct: 3 AAAALWQPQEEGLREICTLLDAHISPNS--DQARIWQQLQHYSQFPDFNNYLVFLLARGE 60
Query: 62 GKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVV 121
GKS E RQAAGLLLKNNLR + SM P++QQY+KSELLPC+GA ++ IRSTVGT++SV+
Sbjct: 61 GKSFEARQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVLF 120
Query: 122 QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIF 181
Q+ +AGW+EL QAL CLDSND++HMEGAMDA+ KICED+P+ LD DVPGL E PIN+F
Sbjct: 121 QIVRVAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLPERPINVF 180
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLV 241
+PRLLQFFQS H LRKL+LG +NQ+I++MP+AL++SMDQYLQGLF L+ DPSA+VRKLV
Sbjct: 181 MPRLLQFFQSTHAILRKLALGCINQYIVVMPAALYMSMDQYLQGLFNLAKDPSADVRKLV 240
Query: 242 CAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKE 301
C+A+ LIEVRPS LEPHL+N+ E MLQ NKD+DD+VALEACEFW +Y + +P E L+E
Sbjct: 241 CSAWVQLIEVRPSILEPHLKNVTELMLQANKDSDDEVALEACEFWSAYCDVSMPPEGLRE 300
Query: 302 FLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDI 361
FLPRL+P LLSNM Y+DDDESL +AEEDES PDRDQDLKPRFH+SRLHGSE EDDDDD
Sbjct: 301 FLPRLIPTLLSNMSYSDDDESLADAEEDESFPDRDQDLKPRFHASRLHGSETGEDDDDDD 360
Query: 362 -VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIA 420
VNVWNLRKCSAA LDVLSNVFGD+ILPTLMP+IQ L+ + D+AWK+REAAVL++GAIA
Sbjct: 361 AVNVWNLRKCSAAGLDVLSNVFGDDILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAIA 420
Query: 421 EGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKV 480
EGCI GLYPHL +IVAFLIPLLDDKFPLIRSI+CWTLSR+SKFIVQ + H NGREQF+K+
Sbjct: 421 EGCITGLYPHLPQIVAFLIPLLDDKFPLIRSITCWTLSRYSKFIVQSLEHPNGREQFDKI 480
Query: 481 LMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQRRNLRIV 540
L+GLL+R+LDTNKRVQEAACSAFATLEEEAAEEL P L IILQHLM A+GKYQRRNLRI+
Sbjct: 481 LLGLLRRVLDTNKRVQEAACSAFATLEEEAAEELVPHLGIILQHLMCAYGKYQRRNLRIL 540
Query: 541 YDAIGTLADAVGFELNQ 557
YDA+GTLADAVG ELNQ
Sbjct: 541 YDALGTLADAVGAELNQ 557
>sp|Q8BFY9|TNPO1_MOUSE Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2
Length = 898
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/565 (46%), Positives = 370/565 (65%), Gaps = 25/565 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D AEVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQN 472
+L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QP 481
Query: 473 GREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKY 532
+ ++ LLKRILD+NKRVQEAACSAFATLEEEA EL P L IL L+ AF KY
Sbjct: 482 PDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKY 541
Query: 533 QRRNLRIVYDAIGTLADAVGFELNQ 557
Q +NL I+YDAIGTLAD+VG LN+
Sbjct: 542 QHKNLLILYDAIGTLADSVGHHLNK 566
>sp|Q92973|TNPO1_HUMAN Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2
Length = 898
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/565 (45%), Positives = 369/565 (65%), Gaps = 25/565 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D EVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQN 472
+L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QP 481
Query: 473 GREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKY 532
+ ++ LLKRILD+NKRVQEAACSAFATLEEEA EL P L IL L+ AF KY
Sbjct: 482 PDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKY 541
Query: 533 QRRNLRIVYDAIGTLADAVGFELNQ 557
Q +NL I+YDAIGTLAD+VG LN+
Sbjct: 542 QHKNLLILYDAIGTLADSVGHHLNK 566
>sp|Q3SYU7|TNPO1_BOVIN Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2
Length = 898
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/565 (45%), Positives = 369/565 (65%), Gaps = 25/565 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D EVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLIRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEEDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQN 472
+L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QP 481
Query: 473 GREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKY 532
+ ++ LLKRILD+NKRVQEAACSAFATLEEEA EL P L IL L+ AF KY
Sbjct: 482 PDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKY 541
Query: 533 QRRNLRIVYDAIGTLADAVGFELNQ 557
Q +NL I+YDAIGTLAD+VG LN+
Sbjct: 542 QHKNLLILYDAIGTLADSVGHHLNK 566
>sp|Q99LG2|TNPO2_MOUSE Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1
Length = 887
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 359/564 (63%), Gaps = 24/564 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
WQP EQG ++ +LL+ SP+ TA + + +L+Q +QFPDFNNYL F+L R + +
Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPN-TATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEP 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ Y+S P +IK E L +G A IR+T+G +++ + G +
Sbjct: 62 TRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGEL 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W ELL L L+S D N EGA AL KICED ++LDSD P+NI +P+ L
Sbjct: 122 QMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNR---PLNIMIPKFL 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFIM AL ++D +++ LF L+ D EVRK VC A
Sbjct: 179 QFFKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ ++ +YMLQ +D D++VALEACEFW + E + E L L +L
Sbjct: 239 MLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQL 298
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSR----LHGSENP------ 354
+P+L++ M Y++ D L++ EEDE++PD +QD+KPRFH SR H +E P
Sbjct: 299 IPILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLTHEAERPDSSEDA 358
Query: 355 -EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAV 413
+DDDDD ++ WNLRKCSAAALDVL+NVF +E L ++ W +E+ +
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREE---LLPHLLPLLKGLLFHPEWVVKESGI 415
Query: 414 LALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNG 473
L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q
Sbjct: 416 LVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPP 471
Query: 474 REQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQ 533
+ ++ LLKRILD NKRVQEAACSAFATLEEEA EL P L IL L+ AFGKYQ
Sbjct: 472 DMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQ 531
Query: 534 RRNLRIVYDAIGTLADAVGFELNQ 557
+NL I+YDAIGTLAD+VG LNQ
Sbjct: 532 HKNLLILYDAIGTLADSVGHHLNQ 555
>sp|O14787|TNPO2_HUMAN Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3
Length = 897
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 359/564 (63%), Gaps = 24/564 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
WQP EQG ++ +LL+ SP+ TA + + +L+Q +QFPDFNNYL F+L R + +
Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPN-TATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEP 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ Y+S P +IK E L +G A IR+T+G +++ + G +
Sbjct: 62 TRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGEL 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W ELL L L+S D N EGA AL KICED ++LDSD P+NI +P+ L
Sbjct: 122 QMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDA---LNRPLNIMIPKFL 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFIM AL ++D +++ LF L+ D EVRK VC A
Sbjct: 179 QFFKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ ++ +YMLQ +D D++VALEACEFW + E + E L L +L
Sbjct: 239 MLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQL 298
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRL----HGSENP------ 354
+P+L++ M Y++ D L++ EEDE++PD +QD+KPRFH SR H +E P
Sbjct: 299 IPILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLPHEAERPDGSEDA 358
Query: 355 -EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAV 413
+DDDDD ++ WNLRKCSAAALDVL+NVF +E L ++ W +E+ +
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREE---LLPHLLPLLKGLLFHPEWVVKESGI 415
Query: 414 LALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNG 473
L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q
Sbjct: 416 LVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPP 471
Query: 474 REQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQ 533
+ ++ LLKRILD NKRVQEAACSAFATLEEEA EL P L IL L+ AFGKYQ
Sbjct: 472 DMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQ 531
Query: 534 RRNLRIVYDAIGTLADAVGFELNQ 557
+NL I+YDAIGTLAD+VG LNQ
Sbjct: 532 HKNLLILYDAIGTLADSVGHHLNQ 555
>sp|O14089|IMB2_SCHPO Importin subunit beta-2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap104 PE=3 SV=1
Length = 910
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 335/579 (57%), Gaps = 35/579 (6%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W QEQ E+ +++ +S +S + + L++ PD NNYL IL A SV
Sbjct: 6 WVLQEQVLVELSEVIKNSLSENSQTRNAAL-NLLEKAKDIPDLNNYLTCILINATELSVS 64
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQ--YIKSELLPCLGAADRHIRSTVGTIVSVVVQLG 124
IR AAGLLLKNN+R + Q Y KS ++ L ++ IR G +++ ++
Sbjct: 65 IRSAAGLLLKNNVRVSSLESGSGLQSLDYTKSTVIRGLCDPEQLIRGISGNVITTIISRW 124
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPR 184
GI+ W E+L L+ L S EGA AL+KICED Q LD D G P++ +PR
Sbjct: 125 GISTWPEVLPQLMEMLSSPASTTQEGAFSALTKICEDSAQELDRDFNGTR--PLDFMIPR 182
Query: 185 LLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAA 244
++ + + +R +L +NQF+++ +L+ +D +L+ + L+ D S VRK VC A
Sbjct: 183 FIELARHENPKIRTDALFCLNQFVLIQSQSLYAHIDTFLETCYALATDVSPNVRKNVCQA 242
Query: 245 FNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLP 304
L++VRP + P L ++ EYML +D+D +VALEACEFW + E L +L
Sbjct: 243 LVYLLDVRPDKIAPSLGSIVEYMLYSTQDSDQNVALEACEFWLAIAEQPDLCSALGPYLD 302
Query: 305 RLVPVLLSNMIYADDDESLVEAEEDE-SLPDRDQDLKPRF--HSSRL----------HGS 351
++VP+LL M+Y+D D L+ + D+ + DR++D++P+ SR+ GS
Sbjct: 303 KIVPMLLQGMVYSDMDLLLLGNDADDYDVEDREEDIRPQHAKGKSRITLNTQGPITQQGS 362
Query: 352 ENPEDDDDDIVNV--------------WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
N + D+ + + WNLRKCSAAALDVLS+ + +L ++P ++
Sbjct: 363 SNADADELEDEDEDDDEFDEDDDAFMDWNLRKCSAAALDVLSSFWKQRLLEIILPHLKQS 422
Query: 398 LSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTL 457
L++ E WK +EA VLA+GAIAEGC+ G+ +L E+ + + LLD K PL+R+I+CWTL
Sbjct: 423 LTS---EDWKVQEAGVLAVGAIAEGCMDGMVQYLPELYPYFLSLLDSKKPLVRTITCWTL 479
Query: 458 SRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPR 517
R+SK+ ++ ++ F +L GLL+ ++D NK+VQEA CSAFA LEE+A L P
Sbjct: 480 GRYSKWASCLESEEDRQKYFVPLLQGLLRMVVDNNKKVQEAGCSAFAILEEQAGPSLVPY 539
Query: 518 LEIILQHLMMAFGKYQRRNLRIVYDAIGTLADAVGFELN 556
LE IL +L AF KYQR+N+ I+YDA+ TLAD VG LN
Sbjct: 540 LEPILTNLAFAFQKYQRKNVLILYDAVQTLADYVGSALN 578
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 155/381 (40%), Gaps = 51/381 (13%)
Query: 181 FLPRLLQFFQSPHTSLRKL-------SLGSVNQFIMLMPS-----ALFVSMDQYLQGLFL 228
+LP L +F S S + L +LG +++ + S FV + LQGL
Sbjct: 452 YLPELYPYFLSLLDSKKPLVRTITCWTLGRYSKWASCLESEEDRQKYFVPL---LQGLLR 508
Query: 229 LSNDPSAEVRKLVCAAFNLLIE-VRPS---FLEPHLRNLFEYMLQVNKDTDDDVALEACE 284
+ D + +V++ C+AF +L E PS +LEP L NL + Q + + + +A +
Sbjct: 509 MVVDNNKKVQEAGCSAFAILEEQAGPSLVPYLEPILTNL-AFAFQKYQRKNVLILYDAVQ 567
Query: 285 FWHSYFEAQLPHENLKEFLPRLVPVLLSNMIYADDD----------ESLVEAEEDESLPD 334
Y + L + E L + P+L + DDD S+ A D P
Sbjct: 568 TLADYVGSALNDKRYIELL--ITPLLQKWSMIPDDDPNLFPLFECLSSVAVALRDGFAPF 625
Query: 335 RDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNV---FGDEILPTLM 391
+ F R +D V+V + R LD++S + G ++ P L
Sbjct: 626 AAETYARTFRILRNTLYLITTAQNDPTVDVPD-RDFLVTTLDLVSGIIQALGSQVSPLLA 684
Query: 392 ----PVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFP 447
P+ Q + DE + R++A LG + C + P+ ++ ++P + + P
Sbjct: 685 QADPPLGQIIGICAKDEVPEVRQSAYALLGDMCMYCFDQIRPYCDALLVDMLPQM--QLP 742
Query: 448 LIRSISCWTLSRFSKFIVQDIGHQNGR--EQFEKVLMGLLKRIL---DTNKRVQEAACSA 502
L+ + S + + ++ Q G+ +Q+ K L+ L IL +N V E
Sbjct: 743 LLHV----SASNNAIWSAGEMALQLGKDMQQWVKPLLERLICILKSKKSNTTVLENVAIT 798
Query: 503 FATLEEEAAEELAPRLEIILQ 523
L E +AP LE+ Q
Sbjct: 799 IGRLGVYNPELVAPHLELFYQ 819
>sp|Q55CQ7|TNPO_DICDI Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1
Length = 931
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 200/335 (59%), Gaps = 5/335 (1%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W P + G ++ +L S S QI ++L ++ PD+NNYL I E +
Sbjct: 4 WVPNQDGLKQLVYVLNLSNSTSREV-HDQIREELDKFHSVPDYNNYLTLIFKSNELQP-H 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
IR AGL+LK N++ ++ M Q YIK E+LP L D +R TVG I++ +++
Sbjct: 62 IRSVAGLVLKTNIKQYFEKMPREVQNYIKREILPVLSDPDASVRHTVGNIITNLIKKSCF 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
+ W ELL AL LDSN + +EG++ LS +CED + LDSD G A +N +P+L+
Sbjct: 122 SEWPELLPALNLALDSNSQDLIEGSLYTLSLLCEDSTKKLDSDDSGRA---LNQLIPKLI 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
FF+ + RK +L S++ FI+ MP AL ++M+ +L+G+F +S DPS VR VC
Sbjct: 179 MFFKCNNADFRKKALVSISYFIISMPGALLINMEAFLKGIFSMSEDPSEAVRTNVCKTLV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
L+E + FL P+++++ +YML KD ++VALEACEFW + +A+ + L+++LP L
Sbjct: 239 TLVETKIEFLLPYIKDVIQYMLHATKDKSEEVALEACEFWTAISQAEGCRDLLRDYLPVL 298
Query: 307 VPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKP 341
VP+LL+ M+Y + D ++ +D PDR QD+KP
Sbjct: 299 VPILLNGMVYTEQDYEYLDQGDDSMTPDRPQDIKP 333
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 137/194 (70%), Gaps = 7/194 (3%)
Query: 365 WNLRKCSAAALDVLSNVFGD-EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGC 423
W +RK SA A+DVLS +F D E L +P+I+ +++ W RE+A+LALGAIA+G
Sbjct: 405 WTIRKSSAFAIDVLSGIFPDAEYLSVTLPLIEQRMNEQN--PWPVRESAILALGAIADGS 462
Query: 424 IKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMG 483
GL PHLS+++ +LI L+D PL+RSI+CWTLSR+S +I Q +GR+ +++
Sbjct: 463 KNGLAPHLSKVIPYLINTLNDPKPLVRSITCWTLSRYSYWIAQ----ADGRDYLHPLVVN 518
Query: 484 LLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQRRNLRIVYDA 543
LL RI+D NK+VQEAACSAFATLEEEA L P L++IL + AFGKYQ +NL I+YDA
Sbjct: 519 LLNRIVDNNKKVQEAACSAFATLEEEADLLLIPYLQMILVTFVNAFGKYQAKNLLILYDA 578
Query: 544 IGTLADAVGFELNQ 557
I TLA VG ELN+
Sbjct: 579 ISTLAKVVGNELNK 592
>sp|P38217|IMB2_YEAST Importin subunit beta-2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP104 PE=1 SV=1
Length = 918
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 306/594 (51%), Gaps = 62/594 (10%)
Query: 6 AWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSV 65
W+P E ++ LL+ +SP+ ++ + ++ + P+F NYL +IL E V
Sbjct: 4 TWKPAEDYVLQLATLLQNCMSPNPEI-RNNAMEAMENFQLQPEFLNYLCYILIEGESDDV 62
Query: 66 -----------EIRQAAGLLLKNNLRTAYKSMSPSNQQ---YIKSELLPCLGAADRHIRS 111
R AG+LLKN++ ++ SN Y+KS ++ L ++ ++ S
Sbjct: 63 LKQHYSLQDLQNNRATAGMLLKNSMLGG-NNLIKSNSHDLGYVKSNIIHGLYNSNNNLVS 121
Query: 112 TVGTIVSVVV------QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQV 165
V IV + Q L++L L+ N E ++ ALSKI ED Q
Sbjct: 122 NVTGIVITTLFSTYYRQHRDDPTGLQMLYQLLELTS----NGNEPSIKALSKIMEDSAQF 177
Query: 166 LDSDVPGLAECPINIFLPRLLQFFQSPHTS--LRKLSLGSVNQFIMLMPSALFVSMDQYL 223
+ G + P+ L +F +P+ S +R S+ +N I L + V +D++L
Sbjct: 178 FQLEWSGNTK-PMEALLDSFFRFISNPNFSPVIRSESVKCINTVIPLQTQSFIVRLDKFL 236
Query: 224 QGLFLLS-NDPSAEVRKLVCAAFNLLIEVRPSFLEPHLRNLFEYMLQ-VNKDTDDDVALE 281
+ +F L+ ND + VR +C +F+ L+E RP L HL + ++ML + ++ VA+E
Sbjct: 237 EIIFQLAQNDENDLVRAQICISFSFLLEFRPDKLVSHLDGIVQFMLHLITTVNEEKVAIE 296
Query: 282 ACEFWHSYFEA-QLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDES--LPDRDQD 338
ACEF H++ + +P L+ ++ +VP+LLS M+Y ++ L+EA D+ L D+D+D
Sbjct: 297 ACEFLHAFATSPNIPEHILQPYVKDIVPILLSKMVYNEESIVLLEASNDDDAFLEDKDED 356
Query: 339 LKP---RFHSSRLHGS-----------ENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGD 384
+KP R + G+ ++ +D+D D+ WNLRKCSAA LDV++N+
Sbjct: 357 IKPIAPRIVKKKEAGNGEDADDNEDDDDDDDDEDGDVDTQWNLRKCSAATLDVMTNILPH 416
Query: 385 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDD 444
+++ P ++ L G + W REA +LALGA+AEG +K L ++ FL+ L+D
Sbjct: 417 QVMDIAFPFLREHL---GSDRWFIREATILALGAMAEGGMKYFNDGLPALIPFLVEQLND 473
Query: 445 KFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFA 504
K+ +R ++CWTLSRFS +I+QD E VL ++ ++D K VQEAA S+ A
Sbjct: 474 KWAPVRKMTCWTLSRFSPWILQD-----HTEFLIPVLEPIINTLMDKKKDVQEAAISSVA 528
Query: 505 TLEEEAAEELAPRLEIILQHLMMAFGK----YQRRNLRIVYDAIGTLADAVGFE 554
E A EL L L+ +F K Y+++NL I+YDAIG A+ +
Sbjct: 529 VFIENADSELVETL--FYSQLLTSFDKCLKYYKKKNLIILYDAIGRFAEKCALD 580
>sp|O18388|IMB_DROME Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=2
SV=2
Length = 884
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 227/555 (40%), Gaps = 90/555 (16%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQ---LQQY--SQFPDFNNYLAFILARAEGKSVEIRQA 70
++ +LE+ +SP DK+++ L+Q S P+F L+ IL +V R A
Sbjct: 8 QLIAILEKTVSP----DKNELLSAKNFLEQAAASNLPEFLKALSEILVNTANSAVA-RMA 62
Query: 71 AGLLLKNNLRTAYKSMSPSNQ-----------QYIKSELLPCLGAADRHIRSTVGTIVSV 119
AGL LKN+L + + +S Q + IK+ +L LG + + V
Sbjct: 63 AGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSCAAQCVAYV 122
Query: 120 VVQLGGIAGWLELLQALVTCLDSNDIN--HMEGAMDALSKICEDIPQVLDSDVPGLAECP 177
V I W L+Q LV + S + H E A++A+ IC+DI G+ E
Sbjct: 123 AVIELPINRWPMLIQTLVNKVVSEGSSEMHRESALEAIGYICQDIR-------FGVMENQ 175
Query: 178 INIFLPRLLQFFQS--PHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSA 235
N L ++ + P +R + +++ + S M++ + ++
Sbjct: 176 SNDVLTAIIHGMRKVEPSNHVRLAATTALHNSLEFTKSNFEKDMERNFI-MEVVCEATQC 234
Query: 236 EVRKLVCAAFNLLIEVRP---SFLEPHL-RNLFEYMLQVNKDTDDDVALEACEFWHSYFE 291
+ ++ AA L+++ ++EP++ + LF L K +D VAL+ EFW
Sbjct: 235 QDSQICVAALQCLVKIMTLYYQYMEPYMAQALFPITLAAMKSDNDAVALQGIEFW----- 289
Query: 292 AQLPHENLKEFLPRLVPVLLSNMIYADDDESL--VEAEEDESLPDRDQDLKPR----FHS 345
SN+ + D ++ EA + P R R F +
Sbjct: 290 --------------------SNVCDEEIDLAIESQEATDQGRAPQRVSKHYARGALQFLT 329
Query: 346 SRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEA 405
L +D+ DD + W+ K ++ L VL+ DEI+P ++P I+ + +
Sbjct: 330 PVLVEKLTKQDECDD-EDTWSPAKAASVCLMVLATCCEDEIVPHVLPFIKENIESPN--- 385
Query: 406 WKDREAAVLALGAIAEGC-IKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFI 464
W+ R+AAV+ G++ G L P + + + LI L+ D ++R WT R I
Sbjct: 386 WRFRDAAVMTFGSVLNGLETNTLKPLVEQAMPTLIRLMYDSSVIVRDTIAWTFGRICDII 445
Query: 465 VQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAE------------ 512
+ + E + + L+ + L + RV C AF L + A E
Sbjct: 446 PEAAIN----ETYLQTLLECFVKSLKSEPRVAANVCWAFIGLSDAAWEAAVTNDGETPET 501
Query: 513 -ELAPRLEIILQHLM 526
L+P E I+ L+
Sbjct: 502 YALSPYFEYIITQLL 516
>sp|O00410|IPO5_HUMAN Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4
Length = 1097
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 218/529 (41%), Gaps = 76/529 (14%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILA--RAEGKSVEIRQAAGLLLKN 77
LL +SP + K Q + Y P + + F+L R + E RQ A +LL+
Sbjct: 14 LLGNLLSPDNVVRK----QAEETYENIPG-QSKITFLLQAIRNTTAAEEARQMAAVLLRR 68
Query: 78 NLRTAYKSMSPS----NQQYIKSELLPCL-----GAADRHIRSTVGTIVSVVVQLGGIAG 128
L +A+ + P+ Q IKSELL + + + + + ++ G
Sbjct: 69 LLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQ 128
Query: 129 WLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQF 188
W E L+ L + S ++ E A+ I + P + + + +++ L+Q
Sbjct: 129 WPEGLKFLFDSVSSQNVGLREAAL----HIFWNFPGIFGNQ----QQHYLDVIKRMLVQC 180
Query: 189 FQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAF 245
Q H S+R LS + FI+ ALF L G ND + V +
Sbjct: 181 MQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKSL 240
Query: 246 NLLIEVRPSFLEPHLRNLFEYMLQVNKDTD-----DDVALEACEFWHSYFEAQL-PHENL 299
+ + P +L PHL + L++ DT +ALE A L H N+
Sbjct: 241 VEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAAAMLRKHTNI 300
Query: 300 KEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDD 359
+ + +P +L+ M+ ++DE A+E EDDD
Sbjct: 301 ---VAQTIPQMLAMMVDLEEDEDWANADE-------------------------LEDDDF 332
Query: 360 DIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDREAAVLALGA 418
D V +ALD ++ G + +LP + I L + WK R A ++AL A
Sbjct: 333 DSNAV-----AGESALDRMACGLGGKLVLPMIKEHIMQMLQ---NPDWKYRHAGLMALSA 384
Query: 419 IAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFE 478
I EGC + + L+EIV F++ L D P +R +C + + + D ++ E
Sbjct: 385 IGEGCHQQMEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQMAT----DFAPGFQKKFHE 440
Query: 479 KVLMGLLKRILDT-NKRVQEAACSAFATLEEEAAEE-LAPRLEIILQHL 525
KV+ LL+ + D N+RVQ A +A E+ + L P L+ +++HL
Sbjct: 441 KVIAALLQTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHL 489
>sp|Q8BKC5|IPO5_MOUSE Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3
Length = 1097
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 219/529 (41%), Gaps = 76/529 (14%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILA--RAEGKSVEIRQAAGLLLKN 77
LL +SP + K Q + Y P + + F+L R + E RQ A +LL+
Sbjct: 14 LLGNLLSPDNVVRK----QAEETYENIPG-RSKITFLLQAIRNTTAAEEARQMAAVLLRR 68
Query: 78 NLRTAYKSMSPS----NQQYIKSELLPCL-----GAADRHIRSTVGTIVSVVVQLGGIAG 128
L +A+ + P+ Q IKSELL + + + I + ++ G
Sbjct: 69 LLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNLIDEDGNNQ 128
Query: 129 WLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQF 188
W E L+ L + S ++ E A+ I + P + + + +++ L+Q
Sbjct: 129 WPEGLKFLFDSVSSQNMGLREAAL----HIFWNFPGIFGNQ----QQHYLDVIKRMLVQC 180
Query: 189 FQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAF 245
Q H S+R LS + FI+ ALF L G ND + V +
Sbjct: 181 MQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKSL 240
Query: 246 NLLIEVRPSFLEPHLRNLFEYMLQVNKDTD-----DDVALEACEFWHSYFEAQL-PHENL 299
+ + P +L PHL + L++ DT+ +ALE A L H +L
Sbjct: 241 VEIADTVPKYLRPHLEATLQLSLKLCGDTNLNNMQRQLALEVIVTLSETAAAMLRKHTSL 300
Query: 300 KEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDD 359
+ + +P +L+ M+ ++DE A+E EDDD
Sbjct: 301 ---IAQTIPQMLAMMVDLEEDEDWANADE-------------------------LEDDDF 332
Query: 360 DIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDREAAVLALGA 418
D V +ALD ++ G + +LP + I L + WK R A ++AL A
Sbjct: 333 DSNAV-----AGESALDRMACGLGGKLVLPMIKEHIMQMLQ---NPDWKYRHAGLMALSA 384
Query: 419 IAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFE 478
I EGC + + L+EIV F++ L D P +R +C + + + D ++ E
Sbjct: 385 IGEGCHQQMEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQMAT----DFAPGFQKKFHE 440
Query: 479 KVLMGLLKRILDT-NKRVQEAACSAFATLEEEAAEE-LAPRLEIILQHL 525
KV+ LL+ + D N+RVQ A +A E+ + L P L+ +++HL
Sbjct: 441 KVIAALLQTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHL 489
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 352 ENPEDDDDDIVNVWNLRKCSAAALDVLSNVFG---DEILP---TLMPVIQAKLSASGDEA 405
E+ +D+DD+ +V+ L K S D+L ++F +++LP L+P+I +
Sbjct: 826 ESLQDEDDN--DVYILTKVS----DILHSIFSSYKEKVLPWFEQLLPLIVNLICPQ--RP 877
Query: 406 WKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKF 463
W DR+ + I E C + + ++ ++ + D P +R + + L ++F
Sbjct: 878 WPDRQWGLCIFDDIVEHCSPASFKYAEYFISPMLQYVCDNSPEVRQAAAYGLGVMAQF 935
>sp|P70168|IMB1_MOUSE Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=2
Length = 876
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 220/540 (40%), Gaps = 101/540 (18%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LKNNLRTAYKSMSPSNQQY-----------IKSELLPCLGAADRHIRSTVGTIVSVVVQL 123
+KN+L + + QQ +K+ +L LG S + +
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 124 GGIAGWLELLQALV-TCLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINI 180
++ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 IPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NE 172
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SND 232
L ++Q + S + L + N L+ S F + D+ + F++ +
Sbjct: 173 ILTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQC 228
Query: 233 PSAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSY 289
P VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 PDTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW--- 283
Query: 290 FEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLH 349
SN+ + D ++ +E E +P H+S+ +
Sbjct: 284 ----------------------SNVCDEEMDLAIEASEAAEQG-------RPPEHTSKFY 314
Query: 350 GSEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
+ D++D + WN K + L +LS D+I+P ++P I+
Sbjct: 315 AKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFIKEH 374
Query: 398 LSASGDEAWKDREAAVLALGAIAEGCIKG-LYPHLSEIVAFLIPLLDDKFPLIRSISCWT 456
+ + W+ R+AAV+A G+I EG L P + + + LI L+ D ++R + WT
Sbjct: 375 IK---NPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWT 431
Query: 457 LSRFSKFI----VQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAE 512
+ R + + + D+ + L+ L L RV C AF++L E A E
Sbjct: 432 VGRICELLPEAAINDV--------YLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYE 483
>sp|Q14974|IMB1_HUMAN Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2
Length = 876
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 218/540 (40%), Gaps = 101/540 (18%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LKNNLRTAYKSMSPSNQQY-----------IKSELLPCLGAADRHIRSTVGTIVSVVVQL 123
+KN+L + + QQ +K+ +L LG S + +
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 124 GGIAGWLELLQALV-TCLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINI 180
+ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NE 172
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SND 232
L ++Q + S + L + N L+ S F + D+ + F++ +
Sbjct: 173 ILTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQC 228
Query: 233 PSAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSY 289
P VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 PDTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW--- 283
Query: 290 FEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLH 349
SN+ + D ++ +E E +P H+S+ +
Sbjct: 284 ----------------------SNVCDEEMDLAIEASEAAEQG-------RPPEHTSKFY 314
Query: 350 GSEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
+ D++D + WN K + L +L+ D+I+P ++P I+
Sbjct: 315 AKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEH 374
Query: 398 LSASGDEAWKDREAAVLALGAIAEGCIKG-LYPHLSEIVAFLIPLLDDKFPLIRSISCWT 456
+ + W+ R+AAV+A G I EG L P + + + LI L+ D ++R + WT
Sbjct: 375 IK---NPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWT 431
Query: 457 LSRFSKFI----VQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAE 512
+ R + + + D+ + L+ L L RV C AF++L E A E
Sbjct: 432 VGRICELLPEAAINDV--------YLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYE 483
>sp|O13864|IMB1_SCHPO Importin subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap95 PE=3 SV=1
Length = 863
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 243/578 (42%), Gaps = 106/578 (18%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILAR-AEGKSVE-IRQAAGLLLKN 77
L Q +SP + + +QL+ ++ DF Y+ + A S+ IR AAGL LKN
Sbjct: 6 FLAQTLSPDANV-RLNAEKQLENAAR-TDFAQYMVLLAQELANDNSMPYIRMAAGLALKN 63
Query: 78 NL-----------RTAYKSMSPSNQQYIKSELLPCLGAADRHI-RSTVGTIVSVVVQLGG 125
+ + ++S+ +Q +KS L LG+++ +S + ++
Sbjct: 64 AITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAAIAAYELA 123
Query: 126 IAGWLELLQALVTCLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINIFLP 183
W +L+ LV + + + + ++ + ICE + P+VL + N L
Sbjct: 124 TNQWPDLMVTLVANVGEGQPSALKQHSLQTIGYICESVSPEVLSAQS--------NAILT 175
Query: 184 RLLQFF--QSPHTSLRKLSLGSVNQFIMLMPSALFV--------SMDQYLQGLFLLSNDP 233
++ + P ++R +LG+ L S FV + +Q + + P
Sbjct: 176 AVVAGARKEEPDAAVRLAALGA------LYDSLEFVRENFNNEYERNYIMQVVCEATQSP 229
Query: 234 SAEVRKLVCAAFNLLIEVR-------PSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFW 286
A ++ AAF L+++ P ++E + LF Q +T++ VAL+A EFW
Sbjct: 230 EASIQT---AAFGCLVKIMHLYYDTMPFYME---KALFALTTQGMYNTNEQVALQAVEFW 283
Query: 287 HSYFEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSS 346
+ E ++ NL+ + EA++ +P R R ++
Sbjct: 284 STVCEEEI-EVNLE----------------------IQEAQDLNEVPARQNHGFARAAAA 320
Query: 347 -------RLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLS 399
+L +++ + D+DD WN+ +A L + + V GD I+ ++ ++ +
Sbjct: 321 DILPVLLKLLCNQDEDADEDD----WNISMAAATCLQLFAQVVGDLIVNPVLAFVEQNIQ 376
Query: 400 ASGDEAWKDREAAVLALGAIAEG-CIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLS 458
+ W REAAV+A G++ EG + L P +++ + LI ++ D ++ + W L
Sbjct: 377 ---NPDWHQREAAVMAFGSVLEGPNVAMLTPLVNQALPVLINMMVDPVIFVKDTTAWALG 433
Query: 459 RFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSA-------FATLEEEAA 511
+ S F+ I N ++ LL+ + D N R+ C A FA ++
Sbjct: 434 QISSFVADAI---NPEIHLSPMVSALLQGLTD-NPRIVANCCWAFMNLVCHFAPVDNHQT 489
Query: 512 EELAPRLEIILQHLM-MAFGKYQRRNLRIV-YDAIGTL 547
+ P E I+ L+ + K N R Y+ +GTL
Sbjct: 490 SVMTPFYEAIIGSLLHVTDQKGNENNSRTSGYETLGTL 527
>sp|P52296|IMB1_RAT Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1
Length = 875
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 223/539 (41%), Gaps = 100/539 (18%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LK------NNLRTAYK----SMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLG 124
++ +++ Y+ ++ + ++ +K+ +L LG S + +
Sbjct: 61 IRLLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEI 120
Query: 125 GIAGWLELLQALV-TCLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINIF 181
++ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 PVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NEI 172
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SNDP 233
L ++Q + S + L + N L+ S F + D+ + F++ + P
Sbjct: 173 LTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQCP 228
Query: 234 SAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSYF 290
VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 DTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW---- 282
Query: 291 EAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHG 350
SN+ + D ++ +E E +P H+S+ +
Sbjct: 283 ---------------------SNVCDEEMDLAIEASEAAEQG-------RPPEHTSKFYA 314
Query: 351 SEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKL 398
+ D++D + WN K + L +LS D+I+P ++P I+ +
Sbjct: 315 KGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFIKEHI 374
Query: 399 SASGDEAWKDREAAVLALGAIAEGCIKG-LYPHLSEIVAFLIPLLDDKFPLIRSISCWTL 457
+ W+ R+AAV+A G+I EG L P + + + LI L+ D ++R + WT+
Sbjct: 375 K---NPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTV 431
Query: 458 SRFSKFI----VQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAE 512
R + + + D+ + L+ L L RV C AF++L E A E
Sbjct: 432 GRICELLPEAAINDV--------YLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYE 482
>sp|Q8BIV3|RNBP6_MOUSE Ran-binding protein 6 OS=Mus musculus GN=Ranbp6 PE=2 SV=3
Length = 1105
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 211/527 (40%), Gaps = 87/527 (16%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFIL--ARAEGKSVEIRQAAGL 73
E +LL+ I+PS + Q + Y P F+L R E+RQ A
Sbjct: 18 EFYQLLKNLINPSCMVRR----QAEEVYENIPGLCKT-TFLLDAVRNRRAGYEVRQMAAA 72
Query: 74 LLKNNLRTA----YKSMSPSNQQYIKSELLPCLG-AADRHIRSTVGTIVSVV----VQLG 124
LL+ L + Y ++ P Q+ +K EL+ + +R + I +V+ +
Sbjct: 73 LLRRLLSSGFEEVYPNLPPEVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDES 132
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGL----AECPINI 180
G W E L+ L+ + S ++ E A+ PG+ ++I
Sbjct: 133 GTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHF------------PGIFGNQDRHDLDI 180
Query: 181 FLPRLLQFFQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEV 237
L Q Q H ++R LS + F++ + ALF L G+ ND +
Sbjct: 181 IKRLLDQCIQDQEHPAIRTLSARAAATFVLANENNIALFKDFADLLPGILQAVNDSCYQD 240
Query: 238 RKLVCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDT-----DDDVALEACEFWHSYFEA 292
V + + + P +L P+L + + L++ D+ +ALE
Sbjct: 241 DDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATP 300
Query: 293 QL-PHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGS 351
L H N+ + + VP +L+ M+ DD+ V A+E E
Sbjct: 301 MLKKHTNI---IAQAVPHILAMMVDLQDDDDWVNADEME--------------------- 336
Query: 352 ENPEDD-DDDIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDR 409
EDD D + V + +ALD L+ G + +LP I L + WK R
Sbjct: 337 ---EDDFDSNAV-------AAESALDRLACGLGGKVVLPMTKEHIMQMLQSPD---WKCR 383
Query: 410 EAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIG 469
A ++AL AI EGC + + P L E V ++ L D P +R+ +C TL + +
Sbjct: 384 HAGLMALSAIGEGCHQQMEPILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPSF- 442
Query: 470 HQNGREQFEKVLMGLLKRILDT--NKRVQEAACSAFATLEEEAAEEL 514
+++F ++++ L R ++ N+RVQ A SA E+ + L
Sbjct: 443 ----QKKFHEIVITALLRTMENQGNQRVQSHAASALVIFIEDCPKSL 485
>sp|O60518|RNBP6_HUMAN Ran-binding protein 6 OS=Homo sapiens GN=RANBP6 PE=1 SV=2
Length = 1105
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 211/523 (40%), Gaps = 79/523 (15%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFIL--ARAEGKSVEIRQAAGL 73
E +LL+ I+PS + Q + Y P F+L R E+RQ A
Sbjct: 18 EFYQLLKNLINPSCMVRR----QAEEIYENIPGLCK-TTFLLDAVRNRRAGYEVRQMAAA 72
Query: 74 LLKNNLRTAYKSMSPS----NQQYIKSELLPCLG-AADRHIRSTVGTIVSVV----VQLG 124
LL+ L + ++ + P+ Q+ +K EL+ + +R + I +V+ +
Sbjct: 73 LLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDED 132
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPR 184
G W E L+ L+ + S ++ E A+ P + G E + R
Sbjct: 133 GTNHWPEGLKFLIDSIYSKNVVLWEVALHVFWHF----PGIF-----GTQERHDLDIIKR 183
Query: 185 LL-QFFQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKL 240
LL Q Q H ++R LS + F++ + ALF L G+ ND +
Sbjct: 184 LLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDS 243
Query: 241 VCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDT-----DDDVALEACEFWHSYFEAQLP 295
V + + + P +L P+L + + L++ D+ +ALE L
Sbjct: 244 VLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLK 303
Query: 296 -HENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENP 354
H N+ + + VP +L+ M+ DDE V A+E
Sbjct: 304 KHTNI---IAQAVPHILAMMVDLQDDEDWVNADE-------------------------M 335
Query: 355 EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEI-LPTLMPVIQAKLSASGDEAWKDREAAV 413
E+DD D V + +ALD L+ G ++ LP I L + WK R A +
Sbjct: 336 EEDDFDSNAV-----AAESALDRLACGLGGKVVLPMTKEHIMQMLQSPD---WKYRHAGL 387
Query: 414 LALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNG 473
+AL AI EGC + + L E V ++ L D P +R+ +C TL + + N
Sbjct: 388 MALSAIGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFA-----PNF 442
Query: 474 REQFEKVLMGLLKRILDT--NKRVQEAACSAFATLEEEAAEEL 514
+++F + ++ L R ++ N+RVQ A SA E+ + L
Sbjct: 443 QKKFHETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSL 485
>sp|Q06142|IMB1_YEAST Importin subunit beta-1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP95 PE=1 SV=1
Length = 861
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 155/367 (42%), Gaps = 69/367 (18%)
Query: 127 AGWLELLQALVTCLDSNDINHMEGA-MDALSKICEDIPQVLDSDVPGLAECPINIFLPRL 185
W EL++ +V + +++ A + AL +CE D L NI + +
Sbjct: 130 GAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESA----DPQSQALVSSSNNILIA-I 184
Query: 186 LQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQG-----LFLLSNDPSAEVRKL 240
+Q QS TS + + L ++N L S +F+ + +G + ++ AE ++
Sbjct: 185 VQGAQSTETS-KAVRLAALN---ALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEV 240
Query: 241 VCAAFNLLIEVRP---SFLEPHLRN-LFEYMLQVNKDTDDDVALEACEFWHSYFE----- 291
AAF L ++ +F++P++ L+ + K +D VA EFW + E
Sbjct: 241 QAAAFGCLCKIMSLYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDI 300
Query: 292 ----AQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSR 347
AQ P L+ + L + +D+ P +
Sbjct: 301 AYELAQFPQSPLQSYNFALSSI---------------------------KDVVPNLLNLL 333
Query: 348 LHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWK 407
+E+PEDDD WN+ + A L + + G+ IL ++ ++ ++A W+
Sbjct: 334 TRQNEDPEDDD------WNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADN---WR 384
Query: 408 DREAAVLALGAIAEG---CIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFI 464
+REAAV+A G+I +G + Y H + + ++ L++D+ ++ + W + R + +
Sbjct: 385 NREAAVMAFGSIMDGPDKVQRTYYVH--QALPSILNLMNDQSLQVKETTAWCIGRIADSV 442
Query: 465 VQDIGHQ 471
+ I Q
Sbjct: 443 AESIDPQ 449
>sp|O74476|IMB3_SCHPO Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sal3 PE=3 SV=1
Length = 1095
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 199/497 (40%), Gaps = 83/497 (16%)
Query: 83 YKSMSPSNQQYIKSELLPC-----LGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALV 137
+ S+S ++Q ++S+LL C + + T+ I + G W EL+ +
Sbjct: 88 FSSISNESKQSLQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQG--EWPELINVIF 145
Query: 138 TCLDSNDINHMEGAMDALSKICEDIPQVL---DSDVP-----GLAECPINIFLPRLLQFF 189
++S D + E ++ + P++L DS V GLA+ I + + +
Sbjct: 146 NAVNSPDESFRESVFRTITSL----PRLLSGQDSAVTPLFTTGLADPSIRVRISAARAY- 200
Query: 190 QSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLI 249
+ + + +Q I L+PS + + L L D ++ A +
Sbjct: 201 ---SAVILESKQSTRDQVIPLLPSLMNI--------LPPLQQDRDSDNLADCLMAITEIA 249
Query: 250 EVRPSFLEPHLRNLFEYMLQVNKDTD-DDVALEACEFWHSYFEAQLPHENLK--EFLPRL 306
EV P +P ++ + L + KD + D+ A +A F P K ++ +L
Sbjct: 250 EVFPKLFKPIFESVIAFGLGIIKDKELDNSARQAALELLVCFSEGAPAMCRKSSDYTDQL 309
Query: 307 V--PVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNV 364
V +LL + D ++ E +E + D DQD E D + +V
Sbjct: 310 VLQCLLLMTDVAGDPEDEAEELQEWLNTDDLDQD----------------ESDANHVV-- 351
Query: 365 WNLRKCSAAALDVLSNVFGDEI--------LPTLMPVIQAKLSASGDEAWKDREAAVLAL 416
+ A+D LS G + LP L+P + W +R AA++A+
Sbjct: 352 ------AEQAMDRLSRKLGGKTILPPSFTWLPRLIP----------SQKWSERHAALMAI 395
Query: 417 GAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQ 476
+IAEG K + LS ++ ++PLL D P +R +C + + S D+ +
Sbjct: 396 SSIAEGAEKLMKKELSRVLDMVLPLLADPHPRVRWAACNAVGQMSTDFAPDMQVKYP--- 452
Query: 477 FEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEE-LAPRLEIILQHLMMAFGKYQRR 535
++L L+ + RVQ A +A EEA + L P L+ ILQ L+ +R
Sbjct: 453 -SRILEALVPVLESPESRVQAHAAAAMVNFSEEADNKVLEPYLDDILQRLLTLLQSPKRY 511
Query: 536 NLRIVYDAIGTLADAVG 552
I T+ADA
Sbjct: 512 VQEQAVTTIATVADAAA 528
>sp|Q54EW3|IPO5_DICDI Probable importin-5 homolog OS=Dictyostelium discoideum
GN=DDB_G0291650 PE=3 SV=1
Length = 1067
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 112/545 (20%), Positives = 222/545 (40%), Gaps = 78/545 (14%)
Query: 40 LQQYSQ-FPDFNNYL------AFILARAEGKSVEIRQAAGLLLK-----NNLRTAYKSMS 87
+QQ Q + D+ N+ +FI+ + +R +LL+ N+ K +
Sbjct: 21 IQQAEQLYADYKNHQPDQLVNSFIVLIRTSQDELLRSYPPVLLRTLVNGNDSGNILKGLK 80
Query: 88 PSNQQYIKSELLPCLGAADR-HIRSTVGTIVSVV-VQLGGIAGWLELLQALVTCLDSNDI 145
P +K+EL+ + + HIR ++ +++++ +QL W E+L ++ S +
Sbjct: 81 PETLVTLKTELMFAVREEPKNHIRHSILNVIAILAIQLVPEQKWPEILSFIIESSSSPEE 140
Query: 146 NHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQSPHTSLRKLSLGSVN 205
N E + + I +D +V ++ P + F + + P ++ +L +V+
Sbjct: 141 NLRESSFYLIGAIIDD-SRVAETLAPHFDK-----FALLVEKGLNDPSAKVQVSALETVS 194
Query: 206 QFIMLMPSA------LFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLIEVRPSFLEPH 259
FI P L +M +Q + ++ E +K + F ++ + + + +
Sbjct: 195 TFIDANPEKAEVFKPLIPAMLNTIQKT--IESNLEKEAQKGILT-FIIIAQYHSDWFKTN 251
Query: 260 LRNLFEYMLQV--NKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRLVPVLLSNMIYA 317
+F+ Q ++ +D+ F+ ++ E + K +L +V +LL M
Sbjct: 252 FDMIFKVFFQFLEHQSLEDETKHACLHFFLTFAEFKSSIMKKKLYLEPIVLLLLKWM--- 308
Query: 318 DDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDV 377
+ ED L D + P DDDD V + S
Sbjct: 309 -------SSVEDMDLKDWNS------------LDTEPSDDDDSNVAFEAIEALSHCVSKG 349
Query: 378 LSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAF 437
L F + PTL+ SG+ WK+R ++ L +I+EGC K + + I+
Sbjct: 350 LWEFFL-QCAPTLL--------NSGN--WKERYTGLMTLSSISEGCEKQIKTNFKLIIQS 398
Query: 438 LIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQE 497
++PL +D P +R + L F+ ++ +++ ++ ++ ++ L+ + D RV
Sbjct: 399 ILPLANDSHPRVRFAFFYCLGSFASYLKREM-----QDLYKTLIPVSLEHLNDPFPRVTI 453
Query: 498 AACSAFATLEEEAAEELAPRL--EIILQHLMMAFGKYQRRNLRIV---YDAIGTLADAVG 552
+ C F TL +E+ P E Q L Q N +IV +A ++ D +G
Sbjct: 454 SNCE-FLTL---FLDEIKPNRVKEFKDQFLGRLSPLLQNENYKIVQHSLNAFSSVVDGIG 509
Query: 553 FELNQ 557
E Q
Sbjct: 510 EEFTQ 514
>sp|Q96P70|IPO9_HUMAN Importin-9 OS=Homo sapiens GN=IPO9 PE=1 SV=3
Length = 1041
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 48 DFNNYLAFILARAEGKSVEIRQAAGLLLKNNLRTAYKSMS-----PSNQQYIK---SELL 99
+F +LA + +G ++ IRQ A ++LK + T + + S P + K ELL
Sbjct: 55 EFGVHLAELTVDPQG-ALAIRQLASVILKQYVETHWCAQSEKFRPPETTERAKIVIRELL 113
Query: 100 P-CLGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKI 158
P L + +RS+V VS + W +L L+ L S D+N + GAM L++
Sbjct: 114 PNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEF 173
Query: 159 CEDIPQVLDSDVPGLAECPINIFLPRLLQFF 189
+ V D+ +P +A + LP + + F
Sbjct: 174 TRE---VTDTQMPLVAP----VILPEMYKIF 197
>sp|Q91YE6|IPO9_MOUSE Importin-9 OS=Mus musculus GN=Ipo9 PE=1 SV=3
Length = 1041
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 48 DFNNYLAFILARAEGKSVEIRQAAGLLLKNNLRTAYKSMS-----PSNQQYIK---SELL 99
+F +LA + +G ++ IRQ A ++LK + T + + S P + K ELL
Sbjct: 55 EFGVHLAELTVDPQG-ALAIRQLASVILKQYVETHWCAQSEKFRPPETTERAKIVIRELL 113
Query: 100 P-CLGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKI 158
P L + +RS+V VS + W +L L+ L S D+N + GAM L++
Sbjct: 114 PNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEF 173
Query: 159 CEDIPQVLDSDVPGLAECPINIFLPRLLQFF 189
+ V D+ +P +A + LP + + F
Sbjct: 174 TRE---VTDTQMPLVAP----VILPEMYKIF 197
>sp|Q8TEX9|IPO4_HUMAN Importin-4 OS=Homo sapiens GN=IPO4 PE=1 SV=2
Length = 1081
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 139/591 (23%), Positives = 224/591 (37%), Gaps = 116/591 (19%)
Query: 38 QQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSE 97
+QLQ + P L +LA A +IRQ A +L + L T ++ ++ ++ +KS
Sbjct: 26 EQLQIVLRAPAALPALCDLLASAADP--QIRQFAAVLTRRRLNTRWRRLAAEQRESLKSL 83
Query: 98 LLPCLGAADRHIRS-TVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALS 156
+L L H S ++ + + + + G+ W +LLQ L S E + LS
Sbjct: 84 ILTALQRETEHCVSLSLAQLSATIFRKEGLEAWPQLLQLLQHSTHSPHSPEREMGLLLLS 143
Query: 157 KICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQSPHTSLRKL---SLGSVNQFIMLMPS 213
+ P+ FQ H L +L +LG V P
Sbjct: 144 VVVTSRPEA-----------------------FQPHHRELLRLLNETLGEVGS-----PG 175
Query: 214 ALFVSMDQYLQGLFLLSND--PSAE--VRKLVCA-----------------AFNLLIEVR 252
LF S+ LS + P A V KL+ A A + L+E
Sbjct: 176 LLFYSLRTLTTMAPYLSTEDVPLARMLVPKLIMAMQTLIPIDEAKACEALEALDELLESE 235
Query: 253 PSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRLVPVLLS 312
+ P+L + + L+V ++ A+ F ++ + L + RL+P LL
Sbjct: 236 VPVITPYLSEVLTFCLEVARNVALGNAIRIRILCCLTFLVKVKSKALLKN--RLLPPLLH 293
Query: 313 NMIYADDDESLVEAEEDES-LPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNL---- 367
+ +V AE L DQD + L G E P+ +V++ L
Sbjct: 294 TLF------PIVAAEPPPGQLDPEDQDSEEEELEIELMG-ETPKHFAVQVVDMLALHLPP 346
Query: 368 ----------------------RKCSAAALDVLSNVFGDEILPTLM-PVIQAKLSASGDE 404
RK L VLS+ GD I L+ P++Q D
Sbjct: 347 EKLCPQLMPMLEEALRSESPYQRKAGLLVLAVLSDGAGDHIRQRLLPPLLQIVCKGLEDP 406
Query: 405 AWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLL---DDKFPLIRS----ISCWTL 457
+ R AA+ ALG +E L PH+S ++PLL PL + +C+ L
Sbjct: 407 SQVVRNAALFALGQFSE----NLQPHISSYSREVMPLLLAYLKSVPLGHTHHLAKACYAL 462
Query: 458 SRFSKFIVQDIGH--QNGREQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELA 515
F V+++G Q + + ++ LL+ ++ R +E A SA + A L
Sbjct: 463 ENF----VENLGPKVQPYLPELMECMLQLLRN--PSSPRAKELAVSALGAIATAAQASLL 516
Query: 516 PRLEIILQHLMMAFGKYQRRNLRIV----YDAIGTLADAVGFELNQVLLSC 562
P I++HL F R +L+ V + +G LA AVG + + C
Sbjct: 517 PYFPAIMEHL-REFLLTGREDLQPVQIQSLETLGVLARAVGEPMRPLAEEC 566
>sp|P32337|IMB3_YEAST Importin subunit beta-3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSE1 PE=1 SV=2
Length = 1089
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 176/444 (39%), Gaps = 71/444 (15%)
Query: 94 IKSELLPC-LGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAM 152
I+S LL L IR + ++ VQ + W ELLQAL+ L S + N E +
Sbjct: 102 IRSSLLKGFLSERADSIRHKLSDAIAECVQ-DDLPAWPELLQALIESLKSGNPNFRESSF 160
Query: 153 DALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMP 212
+I +P ++ + IN LP F +++ ++ + + +P
Sbjct: 161 ----RILTTVPYLITA-------VDINSILPIFQSGFTDASDNVKIAAVTAFVGYFKQLP 209
Query: 213 ----SALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLIEVRPSFLEPHLRNLFEY-- 266
S L + + L L +D + V + L+E+ P + + ++
Sbjct: 210 KSEWSKLGILLPSLLNSLPRFLDDGKDDALASVFESLIELVELAPKLFKDMFDQIIQFTD 269
Query: 267 MLQVNKDTDDDVALEACEFWHSYFEAQLP-----HENLKEFLPRLVPVLLSNMIYADDDE 321
M+ NKD + A E + F P ++N + L + ++++ + DDD
Sbjct: 270 MVIKNKDLEPPARTTALELL-TVFSENAPQMCKSNQNYGQTLVMVTLIMMTEVSIDDDD- 327
Query: 322 SLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNV 381
A E D D + + + +R ALD ++
Sbjct: 328 ----AAEWIESDDTDDEEEVTYDHAR-------------------------QALDRVALK 358
Query: 382 FGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPL 441
G E L P+ Q W++R AA++AL + AEGC L + +I+ +IPL
Sbjct: 359 LGGEYLAA--PLFQYLQQMITSTEWRERFAAMMALSSAAEGCADVLIGEIPKILDMVIPL 416
Query: 442 LDDKFPLIRSISCWTLSR----FSKFIVQDIGHQNGREQFEKVLMGLLKRIL-DTNKRVQ 496
++D P ++ C L + FS FI R +++L L+ ++ + RVQ
Sbjct: 417 INDPHPRVQYGCCNVLGQISTDFSPFI--------QRTAHDRILPALISKLTSECTSRVQ 468
Query: 497 EAACSAFATLEEEAAEE-LAPRLE 519
A +A E A+++ L P L+
Sbjct: 469 THAAAALVNFSEFASKDILEPYLD 492
>sp|Q5VYK3|ECM29_HUMAN Proteasome-associated protein ECM29 homolog OS=Homo sapiens GN=ECM29
PE=1 SV=2
Length = 1845
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 363 NVWNLRKCSAAAL-DVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE 421
N+W +R+ S AL D+L D+I+ L + + D R+AA LAL +++
Sbjct: 1174 NMWRVRESSCLALNDLLRGRPLDDIIDKLPEIWETLFRVQDDIKESVRKAAELALKTLSK 1233
Query: 422 GCIKGLYPHLS----EIVAFLIPLLDDKFPL-----IRSISCWTLSRFSK 462
C+K P +A L+P L DK + +R++S TL + SK
Sbjct: 1234 VCVKMCDPAKGAAGQRTIAALLPCLLDKGMMSTVTEVRALSINTLVKISK 1283
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 368 RKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGL 427
R+ SA L + + D ILP ++P+++ L + +E R+ + L + L
Sbjct: 1944 RQISAKTLGDIVSKLSDRILPEILPILERGLRSELEET---RQGVCIGLSEVISSAKTQL 2000
Query: 428 YPHLSEIVAFLIPLLDDKFPLI 449
P+LS +V + L D PLI
Sbjct: 2001 LPYLSSVVTCITKALCD--PLI 2020
>sp|Q6PDI5|ECM29_MOUSE Proteasome-associated protein ECM29 homolog OS=Mus musculus GN=Ecm29
PE=1 SV=3
Length = 1840
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 363 NVWNLRKCSAAAL-DVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE 421
N+W +R+ S AL D+L D+++ L + + D R+AA LAL +++
Sbjct: 1169 NMWRVRESSCLALNDLLRGRPLDDVIDKLPEMWETLFRVQDDIKESVRKAAELALKTLSK 1228
Query: 422 GCIKGLYPHLS----EIVAFLIPLLDDKFPL-----IRSISCWTLSRFSK 462
C+K P +A L+P L DK + +R++S TL + SK
Sbjct: 1229 VCVKMCDPAKGAAGQRTIAVLLPCLLDKGMMSPVTEVRALSINTLVKISK 1278
>sp|Q7TMY7|IPO8_MOUSE Importin-8 OS=Mus musculus GN=Ipo8 PE=2 SV=3
Length = 1010
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 385 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIK-GLYPHLSEIV--AFLIPL 441
E+LP +M L+ + K ++ A+ +G++AE +K L+ E+ + PL
Sbjct: 407 EVLPKMMAFCYQILTDPNFDPRK-KDGALHVIGSLAEILLKKSLFKDQIELFLQNHVFPL 465
Query: 442 LDDKFPLIRSISCWTLSRFSKFIVQ-DIGHQNGREQFEKVLMGLLKRILDTNKRVQEAAC 500
L +R+ SCW L FS ++ +N E +K L I D V+ A
Sbjct: 466 LMSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSL------IEDEEMPVKVEAA 519
Query: 501 SAFATL---EEEAAEELAPRLEIILQHLM 526
A +L + +A E + P + I+Q L+
Sbjct: 520 LALQSLISNQAQAKEHMKPYVRFIMQELL 548
>sp|Q8WNV3|MSTRO_MACFA Protein maestro OS=Macaca fascicularis GN=MRO PE=2 SV=2
Length = 248
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 474 REQFEKVLMGLLKRILDTNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMMAFGKYQ 533
RE + VL L +R D N + A T+ EA +++ +I+L ++ +G Y
Sbjct: 43 REPLKNVLFILAERARDPNANKRHTAMRGLGTMAREAPDKVRKHKKIVLD--LLVYGLYD 100
Query: 534 RRNLRIVYDAIGTLADAVG 552
+L ++++++ TL +G
Sbjct: 101 PVSLEVIHESMKTLTVVLG 119
>sp|Q10178|SF3B1_SCHPO U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=prp10 PE=1 SV=3
Length = 1205
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 367 LRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE--GCI 424
+R +A A V+++ G +P L+P ++A ++W+ R V + IA GC
Sbjct: 525 VRNTTARAFSVVASALG---VPALLPFLKA--VCRSKKSWQARHTGVRIIQQIALLLGC- 578
Query: 425 KGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGL 484
+ PHL +V + L+D+ +R ++ +LS + + G E F+ VL L
Sbjct: 579 -SILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALA-----EAATPYGIEAFDSVLKPL 632
>sp|A9QM74|IMA8_HUMAN Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=1 SV=1
Length = 516
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 20/169 (11%)
Query: 88 PSNQQYIKSELLPCL----GAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSN 143
P +++KS L PCL A +I S VV+ G I Q L+ L S+
Sbjct: 116 PRMVEFLKSSLYPCLQFEAAWALTNIASGTSEQTRAVVEGGAI-------QPLIELLSSS 168
Query: 144 DINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQS--PHTSLRKLSL 201
++ E A+ AL I D P+ D+ + A +P LL P T LR ++
Sbjct: 169 NVAVCEQAVWALGNIAGDGPEFRDNVITSNA-------IPHLLALISPTLPITFLRNITW 221
Query: 202 GSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLIE 250
N P ++ Q L L L +EV C A + L +
Sbjct: 222 TLSNLCRNKNPYPCDTAVKQILPALLHLLQHQDSEVLSDACWALSYLTD 270
>sp|O15397|IPO8_HUMAN Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2
Length = 1037
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 385 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIK-GLYPHLSEIV--AFLIPL 441
E+LP +M L+ + K ++ A+ +G++AE +K L+ E+ + PL
Sbjct: 407 EVLPKMMAFCYQILTDPNFDPRK-KDGALHVIGSLAEILLKKSLFKDQMELFLQNHVFPL 465
Query: 442 LDDKFPLIRSISCWTLSRFSKFIVQ-DIGHQNGREQFEKVLMGLLKRILDTNKRVQEAAC 500
L +R+ SCW L FS ++ +N E +K L I D V+ A
Sbjct: 466 LLSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSL------IEDKEMPVKVEAA 519
Query: 501 SAFATL---EEEAAEELAPRLEIILQHLM 526
A +L + +A E + P + I+Q L+
Sbjct: 520 LALQSLISNQIQAKEYMKPHVRPIMQELL 548
>sp|P33892|GCN1_YEAST Translational activator GCN1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GCN1 PE=1 SV=1
Length = 2672
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 390 LMPVIQAKLSASGDE-AWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPL 448
L+PV + L DE AW+ + +V LG +A L LS IV ++ +L+D
Sbjct: 1448 LIPVAVSNL----DEIAWRTKRGSVQLLGNMAYLDPTQLSASLSTIVPEIVGVLNDSHKE 1503
Query: 449 IRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSAFAT 505
+R + +L RF + I + +K++ LL+ I D K +EA S T
Sbjct: 1504 VRKAADESLKRFGEVI--------RNPEIQKLVPVLLQAIGDPTKYTEEALDSLIQT 1552
>sp|O57683|SF3B1_XENLA Splicing factor 3B subunit 1 OS=Xenopus laevis GN=sf3b1 PE=2 SV=1
Length = 1307
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 367 LRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIA--EGCI 424
+R +A A V+++ G +P+L+P ++A + ++W+ R + + IA GC
Sbjct: 627 VRNTTARAFAVVASALG---IPSLLPFLKAVCKSK--KSWQARHTGIKIVQQIAILMGC- 680
Query: 425 KGLYPHLSEIVAFLIPLLDDKFPLIRSIS 453
+ PHL +V + L D+ +R+IS
Sbjct: 681 -AILPHLRSLVEIIEHGLVDEQQKVRTIS 708
>sp|Q5R6J0|ECM29_PONAB Proteasome-associated protein ECM29 homolog (Fragment) OS=Pongo
abelii GN=ECM29 PE=2 SV=2
Length = 1810
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 363 NVWNLRKCSAAAL-DVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE 421
N W +R+ S AL D+L D+I+ L + + D R+AA LAL +++
Sbjct: 1139 NTWRVRESSCLALNDLLRGRPLDDIIDKLPEIWETLFRVQDDIKESVRKAAELALKTLSK 1198
Query: 422 GCIKGLYPHLS-----EIVAFLIPLLDDKF--PL--IRSISCWTLSRFSK 462
C+K P I A L LLD P+ +R++S TL + SK
Sbjct: 1199 VCVKMCDPAKGAAGQRTIAALLSCLLDKGMMSPVTEVRALSINTLVKISK 1248
>sp|Q99NB9|SF3B1_MOUSE Splicing factor 3B subunit 1 OS=Mus musculus GN=Sf3b1 PE=1 SV=1
Length = 1304
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 367 LRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIA--EGCI 424
+R +A A V+++ G +P+L+P ++A + ++W+ R + + IA GC
Sbjct: 624 VRNTTARAFAVVASALG---IPSLLPFLKAVCKSK--KSWQARHTGIKIVQQIAILMGC- 677
Query: 425 KGLYPHLSEIVAFLIPLLDDKFPLIRSIS 453
+ PHL +V + L D+ +R+IS
Sbjct: 678 -AILPHLRSLVEIIEHGLVDEQQKVRTIS 705
>sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3
Length = 1304
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 367 LRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIA--EGCI 424
+R +A A V+++ G +P+L+P ++A + ++W+ R + + IA GC
Sbjct: 624 VRNTTARAFAVVASALG---IPSLLPFLKAVCKSK--KSWQARHTGIKIVQQIAILMGC- 677
Query: 425 KGLYPHLSEIVAFLIPLLDDKFPLIRSIS 453
+ PHL +V + L D+ +R+IS
Sbjct: 678 -AILPHLRSLVEIIEHGLVDEQQKVRTIS 705
>sp|O60100|IMB4_SCHPO Probable importin subunit beta-4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=kap123 PE=3 SV=1
Length = 1067
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 343 FHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASG 402
F + +E +D + D + + + A L F D +++ +S +G
Sbjct: 808 FEEEDIVSNEEVDDTEQDALLIDSACDVVIALAVALGGSFADSFKVFYPQIVKYYMSKNG 867
Query: 403 DEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSK 462
+E R AV +G +A G + P ++ + + L+D +RS + +++ +
Sbjct: 868 NE----RAMAVACVGEVAGGIESAITPFTRDVFSLFMAALEDSEGEVRSNAAYSMGLLCQ 923
Query: 463 FIVQDIGHQ 471
F +D+ +
Sbjct: 924 FSTEDLSSE 932
>sp|A4XIX0|HSLU_CALS8 ATP-dependent protease ATPase subunit HslU OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=hslU
PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 323 LVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVF 382
++E EE L D D+ +K H + HG I+ + + K + V +V
Sbjct: 245 VLEQEEYNKLIDMDEVIKEAIHRAEQHG----------IIFIDEIDKIAGRGSGVGPDVS 294
Query: 383 GDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLL 442
+ + ++P+++ + K +A GA H+++ V+ LIP L
Sbjct: 295 REGVQRDILPIVEGSTVMTKYGPVKTDHILFIAAGAF----------HVAK-VSDLIPEL 343
Query: 443 DDKFPLIRSISCWTLSRFSKFIVQ 466
+FP++ + T F K + Q
Sbjct: 344 QGRFPVVVELHPLTEEDFKKILTQ 367
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,357,987
Number of Sequences: 539616
Number of extensions: 8386330
Number of successful extensions: 26689
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 26381
Number of HSP's gapped (non-prelim): 241
length of query: 562
length of database: 191,569,459
effective HSP length: 123
effective length of query: 439
effective length of database: 125,196,691
effective search space: 54961347349
effective search space used: 54961347349
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)