Query 008535
Match_columns 562
No_of_seqs 184 out of 2415
Neff 10.6
Searched_HMMs 46136
Date Thu Mar 28 13:23:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 7.6E-81 1.7E-85 622.6 48.1 510 17-557 13-534 (537)
2 KOG1177 Long chain fatty acid 100.0 1.4E-78 3E-83 563.1 41.2 515 17-556 47-588 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 8.2E-76 1.8E-80 609.3 53.2 508 15-555 6-527 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 4.3E-75 9.3E-80 577.8 47.1 491 25-555 14-522 (528)
5 PLN03102 acyl-activating enzym 100.0 2E-71 4.4E-76 584.9 55.6 532 14-555 8-554 (579)
6 PRK07788 acyl-CoA synthetase; 100.0 2E-71 4.4E-76 583.6 50.4 495 21-552 50-548 (549)
7 COG1021 EntE Peptide arylation 100.0 1.4E-72 3E-77 511.3 33.3 506 16-557 24-540 (542)
8 PLN02860 o-succinylbenzoate-Co 100.0 1.1E-70 2.3E-75 578.7 51.9 521 15-557 2-556 (563)
9 PTZ00237 acetyl-CoA synthetase 100.0 1.5E-70 3.3E-75 583.0 53.1 516 22-557 61-625 (647)
10 TIGR02316 propion_prpE propion 100.0 4.8E-70 1E-74 580.0 54.4 518 19-559 50-608 (628)
11 PLN02654 acetate-CoA ligase 100.0 1.2E-69 2.5E-74 578.2 54.3 519 18-556 85-641 (666)
12 PRK07529 AMP-binding domain pr 100.0 6.7E-69 1.5E-73 570.6 54.5 518 17-556 22-571 (632)
13 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2E-68 4.3E-73 568.6 54.1 507 23-556 60-603 (625)
14 PLN02479 acetate-CoA ligase 100.0 2.4E-68 5.2E-73 561.4 54.1 551 1-555 1-558 (567)
15 PRK08162 acyl-CoA synthetase; 100.0 5.7E-68 1.2E-72 557.5 56.5 533 12-558 10-542 (545)
16 PLN02736 long-chain acyl-CoA s 100.0 2.9E-69 6.3E-74 575.8 46.3 515 17-557 41-643 (651)
17 PRK06839 acyl-CoA synthetase; 100.0 3.4E-68 7.4E-73 553.6 52.3 490 21-555 3-495 (496)
18 PRK13295 cyclohexanecarboxylat 100.0 7.6E-68 1.6E-72 555.9 54.3 507 13-556 17-545 (547)
19 PRK00174 acetyl-CoA synthetase 100.0 8.1E-68 1.8E-72 564.7 54.9 509 20-556 66-611 (637)
20 PRK06155 crotonobetaine/carnit 100.0 1.6E-67 3.4E-72 551.7 54.1 506 13-555 14-524 (542)
21 PRK13382 acyl-CoA synthetase; 100.0 8.5E-68 1.8E-72 553.5 51.7 491 19-551 42-536 (537)
22 PRK06334 long chain fatty acid 100.0 2.5E-68 5.3E-73 556.6 47.3 495 18-555 17-535 (539)
23 PLN02614 long-chain acyl-CoA s 100.0 1.3E-68 2.9E-73 568.8 45.5 512 20-557 45-651 (666)
24 PRK08314 long-chain-fatty-acid 100.0 1.6E-67 3.5E-72 554.5 52.4 519 14-556 4-543 (546)
25 PRK10524 prpE propionyl-CoA sy 100.0 2.8E-67 6E-72 560.2 54.6 517 19-558 51-608 (629)
26 PRK07470 acyl-CoA synthetase; 100.0 3.5E-67 7.6E-72 549.4 53.9 512 16-557 3-520 (528)
27 PRK07656 long-chain-fatty-acid 100.0 5.2E-67 1.1E-71 547.2 54.8 505 18-551 3-512 (513)
28 PRK05605 long-chain-fatty-acid 100.0 3.2E-67 7E-72 554.6 53.7 518 18-556 30-570 (573)
29 PLN02574 4-coumarate--CoA liga 100.0 1.4E-67 3.1E-72 554.7 50.0 503 21-558 41-557 (560)
30 PRK06187 long-chain-fatty-acid 100.0 7E-67 1.5E-71 547.6 54.8 517 16-556 2-520 (521)
31 PRK05857 acyl-CoA synthetase; 100.0 1.6E-67 3.5E-72 551.8 49.5 505 19-556 13-532 (540)
32 PRK03640 O-succinylbenzoic aci 100.0 4.1E-67 8.9E-72 543.4 51.6 480 20-555 2-482 (483)
33 PLN02246 4-coumarate--CoA liga 100.0 6.5E-67 1.4E-71 547.9 53.2 504 19-555 22-536 (537)
34 PRK05677 long-chain-fatty-acid 100.0 7.9E-67 1.7E-71 549.7 53.0 513 20-556 24-558 (562)
35 PLN02861 long-chain-fatty-acid 100.0 1.3E-67 2.9E-72 561.8 47.1 513 19-557 42-648 (660)
36 PRK04319 acetyl-CoA synthetase 100.0 4.8E-67 1E-71 552.3 50.8 503 19-556 41-560 (570)
37 PRK08316 acyl-CoA synthetase; 100.0 2.5E-66 5.4E-71 543.4 54.4 508 19-557 10-521 (523)
38 PRK07638 acyl-CoA synthetase; 100.0 8.3E-67 1.8E-71 541.0 49.0 483 20-560 1-486 (487)
39 PRK09274 peptide synthase; Pro 100.0 2.9E-67 6.3E-72 552.8 46.2 506 18-557 4-550 (552)
40 PRK07008 long-chain-fatty-acid 100.0 2.4E-66 5.1E-71 543.3 52.6 521 17-558 7-536 (539)
41 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2E-66 4.2E-71 552.7 52.3 509 18-557 85-628 (652)
42 PRK05852 acyl-CoA synthetase; 100.0 1.7E-66 3.6E-71 544.5 49.5 508 18-555 14-532 (534)
43 PRK03584 acetoacetyl-CoA synth 100.0 3.9E-66 8.3E-71 553.2 52.9 510 18-558 84-628 (655)
44 PRK06145 acyl-CoA synthetase; 100.0 7.6E-66 1.6E-70 535.7 53.0 491 20-554 2-496 (497)
45 PRK07786 long-chain-fatty-acid 100.0 8.6E-66 1.9E-70 539.7 53.6 506 18-558 15-527 (542)
46 PRK07769 long-chain-fatty-acid 100.0 1.6E-66 3.5E-71 554.1 48.4 505 19-557 20-616 (631)
47 PLN03052 acetate--CoA ligase; 100.0 5.4E-66 1.2E-70 550.9 52.3 513 18-558 172-724 (728)
48 PRK07867 acyl-CoA synthetase; 100.0 6.8E-66 1.5E-70 537.4 51.6 492 19-559 4-511 (529)
49 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.2E-65 2.6E-70 537.1 53.2 496 18-550 21-527 (527)
50 PLN02330 4-coumarate--CoA liga 100.0 8.6E-66 1.9E-70 540.2 50.8 503 19-556 27-542 (546)
51 PRK06188 acyl-CoA synthetase; 100.0 2.1E-65 4.6E-70 535.4 53.5 509 16-557 8-519 (524)
52 PRK06060 acyl-CoA synthetase; 100.0 4.1E-66 8.9E-71 557.1 49.0 475 21-554 5-491 (705)
53 PRK06087 short chain acyl-CoA 100.0 2.4E-65 5.3E-70 537.6 53.3 509 16-557 19-538 (547)
54 PRK06018 putative acyl-CoA syn 100.0 2.3E-65 4.9E-70 536.6 52.8 522 15-555 5-534 (542)
55 PRK08315 AMP-binding domain pr 100.0 3.2E-65 7E-70 538.6 53.4 521 13-558 9-554 (559)
56 PTZ00342 acyl-CoA synthetase; 100.0 3.5E-66 7.7E-71 548.1 45.8 512 19-556 60-735 (746)
57 PRK13388 acyl-CoA synthetase; 100.0 2.2E-65 4.7E-70 535.4 51.1 488 19-557 2-508 (540)
58 PRK12583 acyl-CoA synthetase; 100.0 7.1E-65 1.5E-69 536.1 55.3 517 14-556 12-553 (558)
59 PRK06164 acyl-CoA synthetase; 100.0 4.1E-65 8.9E-70 535.3 52.6 518 17-557 7-534 (540)
60 PRK05620 long-chain-fatty-acid 100.0 3.7E-65 8E-70 538.6 52.0 525 15-556 5-558 (576)
61 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 4.4E-65 9.6E-70 534.2 52.0 497 18-551 20-538 (538)
62 PRK08008 caiC putative crotono 100.0 7.1E-65 1.5E-69 530.8 52.9 499 20-550 7-517 (517)
63 PRK07514 malonyl-CoA synthase; 100.0 5.8E-65 1.3E-69 530.2 52.1 495 20-556 3-502 (504)
64 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.9E-64 4E-69 528.0 53.4 499 21-551 1-514 (515)
65 PRK10946 entE enterobactin syn 100.0 1.3E-64 2.9E-69 529.7 51.7 499 18-557 23-534 (536)
66 PLN02387 long-chain-fatty-acid 100.0 2.3E-65 5E-70 546.7 46.4 514 20-557 58-691 (696)
67 PRK06178 acyl-CoA synthetase; 100.0 3.2E-64 7E-69 531.1 53.9 524 18-556 31-566 (567)
68 PRK09088 acyl-CoA synthetase; 100.0 1.2E-64 2.5E-69 525.3 48.9 477 27-556 2-486 (488)
69 PRK06710 long-chain-fatty-acid 100.0 1.8E-64 3.9E-69 532.6 50.6 518 20-559 24-559 (563)
70 PRK12476 putative fatty-acid-- 100.0 5E-65 1.1E-69 540.3 46.3 505 18-558 32-609 (612)
71 PRK08279 long-chain-acyl-CoA s 100.0 2.5E-64 5.4E-69 534.9 51.2 505 15-557 32-566 (600)
72 PRK08043 bifunctional acyl-[ac 100.0 5.7E-65 1.2E-69 548.4 47.0 492 18-557 202-715 (718)
73 PRK12492 long-chain-fatty-acid 100.0 6.5E-64 1.4E-68 527.6 51.5 509 20-552 24-561 (562)
74 PRK13383 acyl-CoA synthetase; 100.0 5.3E-64 1.1E-68 523.3 49.9 477 18-550 33-515 (516)
75 TIGR03443 alpha_am_amid L-amin 100.0 2.2E-64 4.7E-69 582.7 51.0 516 19-553 235-826 (1389)
76 PRK05851 long-chain-fatty-acid 100.0 7.7E-65 1.7E-69 529.7 42.1 487 22-555 4-522 (525)
77 PRK07059 Long-chain-fatty-acid 100.0 2E-63 4.4E-68 523.8 53.0 514 16-552 19-555 (557)
78 TIGR03205 pimA dicarboxylate-- 100.0 3.4E-63 7.3E-68 520.3 53.6 512 18-550 19-541 (541)
79 COG1022 FAA1 Long-chain acyl-C 100.0 2.3E-64 4.9E-69 507.9 42.2 501 19-557 15-603 (613)
80 PRK12467 peptide synthase; Pro 100.0 7.6E-65 1.7E-69 622.5 46.9 488 19-555 3094-3594(3956)
81 PLN02430 long-chain-fatty-acid 100.0 4.7E-64 1E-68 533.5 46.3 515 18-557 40-648 (660)
82 PRK08633 2-acyl-glycerophospho 100.0 7.5E-64 1.6E-68 571.2 50.4 516 17-556 612-1144(1146)
83 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.8E-63 3.9E-68 518.7 48.1 487 21-555 1-502 (502)
84 PRK10252 entF enterobactin syn 100.0 1.1E-63 2.4E-68 575.3 50.3 489 18-552 456-964 (1296)
85 PRK08751 putative long-chain f 100.0 4.3E-63 9.4E-68 522.0 50.2 510 20-552 25-557 (560)
86 TIGR02262 benz_CoA_lig benzoat 100.0 1.9E-62 4.2E-67 511.1 51.2 493 23-552 7-508 (508)
87 PRK07798 acyl-CoA synthetase; 100.0 8.1E-62 1.7E-66 510.6 54.3 504 18-555 1-532 (533)
88 PTZ00216 acyl-CoA synthetase; 100.0 6.4E-63 1.4E-67 529.4 46.3 506 19-557 68-693 (700)
89 PRK08180 feruloyl-CoA synthase 100.0 3.7E-63 8.1E-68 525.8 43.8 499 13-557 32-598 (614)
90 PRK07787 acyl-CoA synthetase; 100.0 1.4E-62 2.9E-67 506.8 46.1 457 29-552 9-470 (471)
91 PRK08974 long-chain-fatty-acid 100.0 1.5E-61 3.4E-66 509.9 54.5 514 20-556 23-556 (560)
92 PRK07445 O-succinylbenzoic aci 100.0 5.4E-63 1.2E-67 503.6 41.8 429 45-557 19-449 (452)
93 KOG1175 Acyl-CoA synthetase [L 100.0 1E-62 2.2E-67 489.4 41.2 509 20-559 63-606 (626)
94 PRK13390 acyl-CoA synthetase; 100.0 4.5E-62 9.7E-67 507.4 47.5 479 28-550 5-501 (501)
95 PRK12316 peptide synthase; Pro 100.0 6.8E-63 1.5E-67 614.5 48.9 488 20-554 2003-2503(5163)
96 PRK04813 D-alanine--poly(phosp 100.0 6.8E-62 1.5E-66 507.3 48.5 488 20-555 2-503 (503)
97 PRK12316 peptide synthase; Pro 100.0 1.3E-62 2.8E-67 612.0 49.4 483 19-554 510-1005(5163)
98 PRK12467 peptide synthase; Pro 100.0 1.3E-62 2.8E-67 603.0 47.4 491 19-555 1573-2085(3956)
99 PRK09029 O-succinylbenzoic aci 100.0 5.4E-62 1.2E-66 500.7 44.5 452 21-558 3-456 (458)
100 PRK12406 long-chain-fatty-acid 100.0 6.4E-61 1.4E-65 499.8 51.5 492 37-556 3-504 (509)
101 KOG1256 Long-chain acyl-CoA sy 100.0 5.2E-62 1.1E-66 482.4 38.3 517 16-558 71-683 (691)
102 PLN03051 acyl-activating enzym 100.0 1.7E-61 3.6E-66 501.1 43.4 455 77-560 1-496 (499)
103 PRK13391 acyl-CoA synthetase; 100.0 1.6E-60 3.6E-65 496.7 49.8 492 26-556 3-510 (511)
104 PRK08276 long-chain-fatty-acid 100.0 1.5E-60 3.3E-65 496.3 48.0 484 36-558 2-499 (502)
105 PRK05691 peptide synthase; Val 100.0 2.6E-61 5.6E-66 596.7 49.4 490 19-552 3719-4225(4334)
106 PRK07868 acyl-CoA synthetase; 100.0 2.4E-60 5.2E-65 523.8 51.5 493 17-555 444-958 (994)
107 PRK05691 peptide synthase; Val 100.0 5.5E-61 1.2E-65 593.8 49.1 485 17-553 1128-1626(4334)
108 PRK05850 acyl-CoA synthetase; 100.0 1.6E-60 3.5E-65 504.1 45.4 500 20-556 1-569 (578)
109 PRK06814 acylglycerophosphoeth 100.0 2.3E-60 5.1E-65 540.1 49.7 497 18-558 629-1135(1140)
110 KOG1180 Acyl-CoA synthetase [L 100.0 2.8E-61 6E-66 455.4 34.1 522 14-557 35-671 (678)
111 PRK12582 acyl-CoA synthetase; 100.0 1.4E-60 3.1E-65 507.0 41.0 498 18-557 47-609 (624)
112 TIGR01923 menE O-succinylbenzo 100.0 6E-60 1.3E-64 483.4 42.6 435 47-549 1-436 (436)
113 PRK09192 acyl-CoA synthetase; 100.0 9.4E-60 2E-64 497.4 43.5 498 21-557 22-568 (579)
114 PRK07768 long-chain-fatty-acid 100.0 1.6E-57 3.6E-62 478.0 44.6 494 21-554 3-544 (545)
115 PRK08308 acyl-CoA synthetase; 100.0 5.5E-57 1.2E-61 456.9 44.3 405 38-549 1-407 (414)
116 KOG1179 Very long-chain acyl-C 100.0 8.9E-56 1.9E-60 420.0 36.8 507 17-552 74-610 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 3E-55 6.6E-60 446.0 32.6 398 26-461 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 9E-52 2E-56 419.4 36.0 393 47-485 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 2.5E-47 5.4E-52 378.8 33.1 320 194-555 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.4E-45 3.1E-50 405.6 42.1 475 20-557 427-997 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 5.1E-38 1.1E-42 336.5 39.6 408 19-478 226-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.8E-39 1.7E-43 315.3 29.6 285 197-545 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.1E-36 2.4E-41 308.3 27.4 320 195-547 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 1.8E-33 4E-38 284.7 35.7 510 20-558 770-1354(1363)
125 KOG1178 Non-ribosomal peptide 100.0 3.3E-31 7.2E-36 277.5 23.4 498 21-551 37-575 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 8.2E-29 1.8E-33 250.7 27.0 321 195-546 84-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 9.2E-28 2E-32 229.5 27.8 319 195-546 88-430 (438)
128 TIGR03089 conserved hypothetic 99.9 1.2E-25 2.6E-30 205.1 21.1 218 26-287 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 7.3E-22 1.6E-26 190.2 14.4 121 428-557 205-330 (365)
130 KOG3628 Predicted AMP-binding 99.9 1.7E-20 3.8E-25 191.4 21.5 501 21-560 95-709 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 1.4E-16 3.1E-21 157.4 23.6 255 198-503 100-377 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 8.3E-12 1.8E-16 91.7 6.5 69 469-543 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.9 9.4E-08 2E-12 92.8 18.7 224 196-456 88-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.5 1.1E-06 2.4E-11 90.6 13.9 103 403-522 356-467 (528)
135 PLN02249 indole-3-acetic acid- 98.0 0.001 2.2E-08 69.1 20.7 58 403-476 395-456 (597)
136 PF14535 AMP-binding_C_2: AMP- 97.7 9.1E-05 2E-09 57.3 6.4 81 462-546 1-91 (96)
137 PLN02247 indole-3-acetic acid- 97.7 0.0047 1E-07 63.8 19.8 59 403-477 402-464 (606)
138 PLN02620 indole-3-acetic acid- 97.5 0.003 6.5E-08 65.0 15.9 59 403-477 408-470 (612)
139 COG1541 PaaK Coenzyme F390 syn 95.3 0.17 3.7E-06 50.1 10.8 93 45-138 109-203 (438)
140 TIGR03335 F390_ftsA coenzyme F 91.0 2.9 6.3E-05 42.8 12.0 84 45-131 105-190 (445)
141 TIGR02155 PA_CoA_ligase phenyl 90.2 3.2 7E-05 42.1 11.5 89 45-134 94-184 (422)
142 TIGR03089 conserved hypothetic 85.5 5 0.00011 36.7 8.5 75 35-118 150-226 (227)
143 PRK07656 long-chain-fatty-acid 75.6 24 0.00052 36.7 10.8 85 45-133 185-271 (513)
144 PRK06187 long-chain-fatty-acid 70.8 27 0.00059 36.3 9.8 85 45-133 186-271 (521)
145 PRK02261 methylaspartate mutas 70.3 44 0.00096 27.6 8.8 101 240-345 6-120 (137)
146 PRK08315 AMP-binding domain pr 66.0 37 0.0008 35.8 9.7 82 45-129 218-301 (559)
147 PRK12583 acyl-CoA synthetase; 65.5 40 0.00086 35.6 9.8 81 45-128 220-302 (558)
148 COG0399 WecE Predicted pyridox 64.9 29 0.00063 34.2 7.7 65 55-123 59-128 (374)
149 PRK06334 long chain fatty acid 64.1 80 0.0017 33.3 11.7 98 33-133 181-289 (539)
150 PF00501 AMP-binding: AMP-bind 64.0 60 0.0013 32.6 10.5 88 195-291 8-99 (417)
151 TIGR03098 ligase_PEP_1 acyl-Co 62.1 50 0.0011 34.4 9.7 85 44-132 179-264 (515)
152 PLN03051 acyl-activating enzym 60.6 53 0.0012 34.1 9.5 85 44-131 137-222 (499)
153 PLN02565 cysteine synthase 57.8 1.7E+02 0.0037 28.3 11.7 89 36-126 31-122 (322)
154 TIGR01733 AA-adenyl-dom amino 57.1 72 0.0016 31.8 9.6 87 45-134 139-228 (408)
155 TIGR01923 menE O-succinylbenzo 56.4 43 0.00093 33.9 7.9 81 45-131 130-211 (436)
156 cd01445 TST_Repeats Thiosulfat 55.7 35 0.00076 28.2 5.7 41 56-96 81-124 (138)
157 COG4009 Uncharacterized protei 55.0 60 0.0013 23.4 5.7 65 45-120 9-76 (88)
158 PLN02860 o-succinylbenzoate-Co 51.6 2E+02 0.0044 30.4 12.3 85 45-133 191-276 (563)
159 PRK03640 O-succinylbenzoic aci 51.5 86 0.0019 32.3 9.3 84 45-132 160-244 (483)
160 PRK11761 cysM cysteine synthas 51.5 1.6E+02 0.0034 28.2 10.3 87 36-125 28-117 (296)
161 TIGR02379 ECA_wecE TDP-4-keto- 51.1 53 0.0011 32.7 7.2 59 62-124 63-126 (376)
162 PF09580 Spore_YhcN_YlaJ: Spor 50.4 50 0.0011 28.7 6.2 51 466-522 76-126 (177)
163 PLN03052 acetate--CoA ligase; 49.6 1.5E+02 0.0032 32.8 10.9 99 195-295 188-290 (728)
164 TIGR02898 spore_YhcN_YlaJ spor 48.3 62 0.0013 27.5 6.0 64 467-535 56-121 (158)
165 COG0031 CysK Cysteine synthase 48.2 1.4E+02 0.003 28.5 8.9 60 65-125 56-116 (300)
166 PRK04319 acetyl-CoA synthetase 48.1 1.1E+02 0.0024 32.4 9.6 85 45-132 224-310 (570)
167 PRK08308 acyl-CoA synthetase; 47.5 2.2E+02 0.0047 28.6 11.3 85 44-132 119-205 (414)
168 COG1022 FAA1 Long-chain acyl-C 47.4 1.5E+02 0.0034 31.6 10.1 102 31-136 187-298 (613)
169 TIGR02262 benz_CoA_lig benzoat 47.3 1.6E+02 0.0035 30.5 10.6 84 44-129 179-264 (508)
170 COG4821 Uncharacterized protei 47.0 59 0.0013 28.5 5.7 56 49-125 83-139 (243)
171 PLN02736 long-chain acyl-CoA s 46.7 3.6E+02 0.0079 29.1 13.5 100 215-319 77-180 (651)
172 PF01041 DegT_DnrJ_EryC1: DegT 46.7 45 0.00097 33.0 6.0 89 22-124 26-120 (363)
173 PLN03013 cysteine synthase 46.1 2.1E+02 0.0047 28.9 10.4 66 61-126 164-230 (429)
174 PRK08043 bifunctional acyl-[ac 46.0 1.7E+02 0.0037 32.2 10.9 81 44-127 383-465 (718)
175 TIGR03590 PseG pseudaminic aci 45.9 2E+02 0.0044 27.1 10.0 68 53-126 18-89 (279)
176 PRK08316 acyl-CoA synthetase; 45.5 1.2E+02 0.0027 31.5 9.4 83 45-131 190-274 (523)
177 PLN03102 acyl-activating enzym 45.4 1.7E+02 0.0037 31.1 10.6 83 216-299 39-125 (579)
178 PRK11706 TDP-4-oxo-6-deoxy-D-g 44.7 97 0.0021 30.8 8.0 58 63-124 64-126 (375)
179 PRK09274 peptide synthase; Pro 44.0 2.1E+02 0.0045 30.1 10.9 97 196-293 20-121 (552)
180 PRK10696 tRNA 2-thiocytidine b 43.3 2.7E+02 0.0058 25.9 10.3 79 47-125 4-95 (258)
181 PRK06164 acyl-CoA synthetase; 43.1 2E+02 0.0043 30.1 10.6 85 45-133 200-285 (540)
182 PRK07638 acyl-CoA synthetase; 43.0 1.8E+02 0.004 29.9 10.2 85 45-133 162-247 (487)
183 PLN02246 4-coumarate--CoA liga 42.9 2E+02 0.0044 30.1 10.6 84 215-299 49-136 (537)
184 PRK08314 long-chain-fatty-acid 42.9 2.1E+02 0.0045 30.0 10.7 83 44-130 208-292 (546)
185 PRK13295 cyclohexanecarboxylat 42.0 2.8E+02 0.0062 29.1 11.6 83 45-131 216-300 (547)
186 cd06448 L-Ser-dehyd Serine deh 41.8 3.3E+02 0.0072 26.3 11.0 90 34-126 15-106 (316)
187 PRK11493 sseA 3-mercaptopyruva 41.5 48 0.001 31.4 5.0 52 45-96 201-257 (281)
188 PRK07788 acyl-CoA synthetase; 41.3 1.7E+02 0.0037 30.7 9.8 85 45-133 226-311 (549)
189 PRK06188 acyl-CoA synthetase; 41.1 1.7E+02 0.0036 30.5 9.6 83 45-131 187-269 (524)
190 KOG1176 Acyl-CoA synthetase [L 40.9 1.4E+02 0.003 31.4 8.5 89 214-303 43-137 (537)
191 PLN02654 acetate-CoA ligase 40.6 2.1E+02 0.0045 31.2 10.4 80 215-295 119-202 (666)
192 PRK05620 long-chain-fatty-acid 40.6 2.6E+02 0.0057 29.6 11.1 86 45-131 200-286 (576)
193 PRK07476 eutB threonine dehydr 40.2 2.9E+02 0.0063 26.7 10.4 57 75-131 71-127 (322)
194 PRK06702 O-acetylhomoserine am 40.1 1.5E+02 0.0033 30.2 8.5 17 273-289 299-316 (432)
195 COG0318 CaiC Acyl-CoA syntheta 40.0 2.9E+02 0.0062 29.1 11.1 97 33-130 169-277 (534)
196 PRK05852 acyl-CoA synthetase; 39.8 2.4E+02 0.0051 29.5 10.5 86 45-133 195-283 (534)
197 PRK06381 threonine synthase; V 39.4 3.6E+02 0.0078 26.0 10.9 99 26-130 21-122 (319)
198 KOG1177 Long chain fatty acid 39.3 4.2E+02 0.0092 27.2 10.9 82 44-128 252-335 (596)
199 TIGR01136 cysKM cysteine synth 39.1 2.1E+02 0.0047 27.3 9.1 89 35-126 22-113 (299)
200 TIGR02370 pyl_corrinoid methyl 38.7 99 0.0021 27.4 6.3 96 236-331 83-185 (197)
201 PRK11658 UDP-4-amino-4-deoxy-L 38.6 1.3E+02 0.0028 29.9 7.9 62 57-122 60-126 (379)
202 TIGR02188 Ac_CoA_lig_AcsA acet 38.6 2.1E+02 0.0046 30.7 10.1 96 195-294 70-169 (625)
203 PLN00011 cysteine synthase 38.5 2.3E+02 0.0049 27.5 9.2 66 60-126 57-124 (323)
204 TIGR01139 cysK cysteine syntha 38.4 3.2E+02 0.0069 26.1 10.2 90 35-127 21-113 (298)
205 cd01561 CBS_like CBS_like: Thi 38.4 3.3E+02 0.0071 25.9 10.3 66 61-127 43-109 (291)
206 PLN02614 long-chain acyl-CoA s 38.2 2.7E+02 0.0059 30.3 10.8 87 44-133 241-331 (666)
207 PRK07529 AMP-binding domain pr 38.1 2.4E+02 0.0051 30.5 10.3 96 195-293 38-137 (632)
208 cd01449 TST_Repeat_2 Thiosulfa 37.9 76 0.0016 25.0 5.0 41 56-96 64-104 (118)
209 PRK10717 cysteine synthase A; 37.5 2.2E+02 0.0049 27.6 9.1 64 62-126 55-119 (330)
210 PRK06382 threonine dehydratase 37.2 3.6E+02 0.0077 27.2 10.7 56 75-130 77-132 (406)
211 TIGR02275 DHB_AMP_lig 2,3-dihy 37.1 3E+02 0.0065 28.7 10.8 85 44-132 201-288 (527)
212 cd00640 Trp-synth-beta_II Tryp 37.0 3.3E+02 0.0072 24.9 10.6 92 35-129 15-108 (244)
213 TIGR03588 PseC UDP-4-keto-6-de 36.8 1.8E+02 0.0039 28.9 8.6 65 56-123 55-127 (380)
214 PRK06155 crotonobetaine/carnit 36.5 2.1E+02 0.0045 30.1 9.4 85 216-301 46-134 (542)
215 TIGR03595 Obg_CgtA_exten Obg f 36.4 43 0.00093 23.8 2.9 19 58-76 45-63 (69)
216 PF09269 DUF1967: Domain of un 36.3 40 0.00087 24.0 2.7 30 46-75 33-62 (69)
217 PRK06839 acyl-CoA synthetase; 35.9 3.8E+02 0.0083 27.5 11.3 86 214-300 25-115 (496)
218 PLN02556 cysteine synthase/L-3 35.9 2.4E+02 0.0051 28.0 9.0 62 64-125 103-165 (368)
219 TIGR01217 ac_ac_CoA_syn acetoa 35.8 3.3E+02 0.0071 29.5 11.0 79 215-294 113-195 (652)
220 COG1064 AdhP Zn-dependent alco 35.5 1.8E+02 0.0039 28.3 7.8 60 62-125 159-218 (339)
221 PF00818 Ice_nucleation: Ice n 35.5 18 0.0004 17.2 0.6 9 341-349 1-9 (16)
222 PRK13388 acyl-CoA synthetase; 35.5 3.3E+02 0.0071 28.6 10.7 84 215-299 25-113 (540)
223 cd01519 RHOD_HSP67B2 Member of 35.4 88 0.0019 24.0 4.9 52 45-96 37-92 (106)
224 PRK05850 acyl-CoA synthetase; 35.3 3.9E+02 0.0084 28.3 11.4 83 215-299 34-123 (578)
225 PLN02550 threonine dehydratase 35.3 5.8E+02 0.013 27.2 12.4 97 32-133 121-219 (591)
226 PRK08008 caiC putative crotono 35.1 4.2E+02 0.0091 27.4 11.5 83 216-299 37-123 (517)
227 PRK07470 acyl-CoA synthetase; 35.0 3.7E+02 0.008 28.0 11.1 87 45-132 182-269 (528)
228 TIGR01138 cysM cysteine syntha 34.7 3E+02 0.0066 26.1 9.3 88 35-125 23-113 (290)
229 cd02070 corrinoid_protein_B12- 34.6 2.6E+02 0.0057 24.8 8.4 112 220-331 64-183 (201)
230 PRK00174 acetyl-CoA synthetase 34.4 3.1E+02 0.0067 29.6 10.5 96 195-294 80-179 (637)
231 PRK08633 2-acyl-glycerophospho 34.4 3.3E+02 0.0072 31.9 11.5 86 44-132 800-887 (1146)
232 cd02069 methionine_synthase_B1 34.4 2.7E+02 0.0058 25.1 8.3 103 236-339 87-198 (213)
233 PRK03584 acetoacetyl-CoA synth 34.3 2.1E+02 0.0044 31.1 9.2 67 65-131 300-369 (655)
234 PRK13237 tyrosine phenol-lyase 34.0 2.7E+02 0.0058 28.5 9.0 50 63-117 110-174 (460)
235 cd00754 MoaD Ubiquitin domain 33.5 1.3E+02 0.0027 21.8 5.2 46 19-79 25-77 (80)
236 PRK08279 long-chain-acyl-CoA s 33.3 3.4E+02 0.0073 28.9 10.6 82 44-129 217-300 (600)
237 PRK15400 lysine decarboxylase 33.2 4.1E+02 0.009 29.0 10.7 97 18-128 193-309 (714)
238 PRK10595 SOS cell division inh 32.8 2.7E+02 0.0058 23.9 7.5 66 58-123 69-140 (164)
239 PF00403 HMA: Heavy-metal-asso 32.7 1.5E+02 0.0033 20.0 5.2 46 467-520 13-58 (62)
240 TIGR01137 cysta_beta cystathio 32.4 2.7E+02 0.0058 28.5 9.2 87 36-125 27-116 (454)
241 PRK10252 entF enterobactin syn 32.0 5.2E+02 0.011 30.8 12.7 86 44-132 616-704 (1296)
242 PTZ00237 acetyl-CoA synthetase 31.7 3.8E+02 0.0082 29.0 10.6 78 215-293 91-172 (647)
243 TIGR02316 propion_prpE propion 31.6 3.9E+02 0.0084 28.7 10.7 94 196-293 66-163 (628)
244 cd07050 BMC_EutL_repeat2 ethan 31.6 89 0.0019 22.8 3.7 40 59-98 3-43 (87)
245 PLN02356 phosphateglycerate ki 31.6 3.1E+02 0.0067 27.8 9.0 64 60-124 93-157 (423)
246 KOG1250 Threonine/serine dehyd 31.5 2.1E+02 0.0046 28.3 7.3 58 75-132 118-175 (457)
247 PRK15407 lipopolysaccharide bi 31.5 2.2E+02 0.0048 29.0 8.3 56 65-124 106-166 (438)
248 PRK07008 long-chain-fatty-acid 31.0 1.5E+02 0.0033 31.1 7.3 86 45-132 195-282 (539)
249 PRK05677 long-chain-fatty-acid 30.6 4E+02 0.0086 28.1 10.5 82 215-297 48-134 (562)
250 PRK10946 entE enterobactin syn 30.4 3.5E+02 0.0077 28.3 10.0 86 44-133 200-288 (536)
251 PRK07787 acyl-CoA synthetase; 29.9 3.1E+02 0.0066 28.1 9.3 83 45-132 147-231 (471)
252 KOG0023 Alcohol dehydrogenase, 29.1 3.9E+02 0.0084 25.8 8.5 74 61-137 173-246 (360)
253 PLN02574 4-coumarate--CoA liga 29.0 5.1E+02 0.011 27.3 11.0 83 216-299 66-153 (560)
254 PRK05857 acyl-CoA synthetase; 28.9 3.4E+02 0.0073 28.5 9.5 80 215-295 40-123 (540)
255 KOG1179 Very long-chain acyl-C 28.8 2.5E+02 0.0053 29.4 7.6 79 46-129 262-343 (649)
256 PLN02387 long-chain-fatty-acid 28.7 5E+02 0.011 28.5 11.0 101 215-320 105-209 (696)
257 PLN02723 3-mercaptopyruvate su 28.7 1.1E+02 0.0024 29.6 5.3 52 45-96 238-295 (320)
258 PLN02330 4-coumarate--CoA liga 28.7 3.4E+02 0.0074 28.4 9.5 84 215-299 54-141 (546)
259 PRK08813 threonine dehydratase 28.6 5E+02 0.011 25.5 9.7 58 74-131 84-141 (349)
260 cd06447 D-Ser-dehyd D-Serine d 28.4 2.6E+02 0.0057 28.1 7.9 61 73-133 136-196 (404)
261 PRK08246 threonine dehydratase 28.4 4.8E+02 0.01 25.1 9.6 60 69-129 67-126 (310)
262 PRK05939 hypothetical protein; 28.2 2.5E+02 0.0055 28.2 7.9 56 67-124 83-138 (397)
263 cd01563 Thr-synth_1 Threonine 28.0 2.3E+02 0.005 27.4 7.5 90 35-130 38-129 (324)
264 PRK07514 malonyl-CoA synthase; 28.0 3.5E+02 0.0075 27.9 9.4 85 214-299 26-114 (504)
265 PRK08574 cystathionine gamma-s 28.0 2.8E+02 0.0061 27.7 8.2 56 67-124 89-144 (385)
266 cd01562 Thr-dehyd Threonine de 28.0 2.8E+02 0.0061 26.4 8.0 93 33-130 30-124 (304)
267 COG2236 Predicted phosphoribos 27.9 96 0.0021 27.4 4.2 31 45-75 6-36 (192)
268 TIGR02035 D_Ser_am_lyase D-ser 27.9 2.6E+02 0.0056 28.5 7.8 65 72-136 153-217 (431)
269 PRK06814 acylglycerophosphoeth 27.8 5.5E+02 0.012 30.1 11.8 84 45-131 812-897 (1140)
270 PRK05605 long-chain-fatty-acid 27.4 2.8E+02 0.006 29.4 8.6 83 216-299 57-143 (573)
271 TIGR01734 D-ala-DACP-lig D-ala 27.4 5.3E+02 0.012 26.5 10.7 85 44-131 159-246 (502)
272 PRK08276 long-chain-fatty-acid 27.4 3.6E+02 0.0079 27.8 9.4 83 216-299 11-97 (502)
273 PRK10524 prpE propionyl-CoA sy 27.3 4.8E+02 0.01 28.0 10.5 95 195-293 66-164 (629)
274 TIGR01127 ilvA_1Cterm threonin 27.1 4.8E+02 0.011 25.9 9.7 96 32-132 12-109 (380)
275 TIGR02618 tyr_phenol_ly tyrosi 26.3 3.7E+02 0.0081 27.4 8.5 51 62-117 102-167 (450)
276 TIGR03208 cyc_hxne_CoA_lg cycl 26.2 6.1E+02 0.013 26.5 10.9 83 45-131 214-298 (538)
277 PRK09088 acyl-CoA synthetase; 26.2 5.2E+02 0.011 26.5 10.3 78 215-293 21-102 (488)
278 KOG0025 Zn2+-binding dehydroge 26.0 2.3E+02 0.0051 26.8 6.3 65 66-130 157-222 (354)
279 PRK12483 threonine dehydratase 25.8 7E+02 0.015 26.2 10.7 63 74-136 88-150 (521)
280 COG0365 Acs Acyl-coenzyme A sy 25.8 4.1E+02 0.0088 27.9 9.0 97 198-299 25-126 (528)
281 PRK06721 threonine synthase; R 25.6 3.1E+02 0.0067 27.0 7.9 89 35-129 43-134 (352)
282 PRK13383 acyl-CoA synthetase; 25.5 3.7E+02 0.008 27.9 9.1 84 216-300 60-147 (516)
283 PLN02479 acetate-CoA ligase 25.5 6.6E+02 0.014 26.5 11.1 81 216-297 45-129 (567)
284 PRK14057 epimerase; Provisiona 25.5 5E+02 0.011 24.2 8.5 67 56-125 88-164 (254)
285 PRK07798 acyl-CoA synthetase; 25.2 6.4E+02 0.014 26.1 10.9 85 215-300 27-115 (533)
286 PF01436 NHL: NHL repeat; Int 25.1 1E+02 0.0022 17.1 2.6 17 443-459 10-26 (28)
287 TIGR02372 4_coum_CoA_lig 4-cou 25.1 7E+02 0.015 24.9 13.2 105 21-131 81-198 (386)
288 TIGR02080 O_succ_thio_ly O-suc 25.0 3.9E+02 0.0086 26.6 8.6 12 337-348 321-332 (382)
289 PRK15399 lysine decarboxylase 25.0 6.7E+02 0.014 27.5 10.5 96 18-127 193-308 (713)
290 PF05452 Clavanin: Clavanin; 25.0 25 0.00054 24.2 0.1 6 433-438 74-79 (80)
291 PRK10877 protein disulfide iso 24.9 5.4E+02 0.012 23.5 9.0 90 437-539 55-147 (232)
292 PRK08526 threonine dehydratase 24.6 6.4E+02 0.014 25.4 10.0 99 32-135 32-132 (403)
293 PRK08638 threonine dehydratase 24.3 4.8E+02 0.01 25.4 8.8 58 74-131 78-135 (333)
294 cd00615 Orn_deC_like Ornithine 24.3 3.3E+02 0.0071 25.8 7.7 55 67-124 96-161 (294)
295 COG2062 SixA Phosphohistidine 24.1 4.6E+02 0.01 22.5 7.8 105 26-132 6-117 (163)
296 cd01019 ZnuA Zinc binding prot 24.0 4.3E+02 0.0094 25.0 8.3 90 47-136 155-247 (286)
297 PRK06087 short chain acyl-CoA 24.0 7.2E+02 0.016 26.0 11.0 77 45-125 206-284 (547)
298 PRK13391 acyl-CoA synthetase; 24.0 6.5E+02 0.014 26.0 10.6 97 195-299 10-110 (511)
299 cd02067 B12-binding B12 bindin 23.9 3.6E+02 0.0079 21.2 7.6 37 90-126 23-59 (119)
300 PRK07059 Long-chain-fatty-acid 23.8 4E+02 0.0086 28.0 9.0 84 215-299 47-134 (557)
301 PRK09162 hypoxanthine-guanine 23.5 2.2E+02 0.0047 24.9 5.7 46 44-90 15-60 (181)
302 PRK08751 putative long-chain f 22.9 4.4E+02 0.0096 27.7 9.2 83 216-299 50-137 (560)
303 cd01448 TST_Repeat_1 Thiosulfa 22.9 2.1E+02 0.0045 22.7 5.2 41 56-96 65-106 (122)
304 PRK07409 threonine synthase; V 22.8 3.5E+02 0.0076 26.6 7.7 90 34-129 45-137 (353)
305 PRK02261 methylaspartate mutas 22.6 4.4E+02 0.0095 21.7 8.5 42 84-125 21-62 (137)
306 PF00291 PALP: Pyridoxal-phosp 22.3 5.1E+02 0.011 24.5 8.7 56 70-126 56-111 (306)
307 PRK02991 D-serine dehydratase; 22.0 3.8E+02 0.0082 27.4 7.8 61 73-133 159-219 (441)
308 cd01524 RHOD_Pyr_redox Member 22.0 3.2E+02 0.007 20.1 5.8 51 44-103 34-84 (90)
309 TIGR03443 alpha_am_amid L-amin 22.0 4.8E+02 0.01 31.4 10.0 97 195-292 249-349 (1389)
310 PRK07768 long-chain-fatty-acid 22.0 7.2E+02 0.016 26.0 10.5 81 44-127 170-256 (545)
311 PRK05638 threonine synthase; V 22.0 3.3E+02 0.0072 27.8 7.5 91 36-132 81-173 (442)
312 PRK10287 thiosulfate:cyanide s 21.9 3.3E+02 0.0072 21.1 5.9 50 44-100 41-90 (104)
313 TIGR01747 diampropi_NH3ly diam 21.7 8.1E+02 0.018 24.4 12.9 104 26-130 28-153 (376)
314 PRK08162 acyl-CoA synthetase; 21.6 4.5E+02 0.0097 27.5 8.8 83 216-299 43-129 (545)
315 smart00450 RHOD Rhodanese Homo 21.5 2.5E+02 0.0055 20.6 5.3 40 57-96 43-82 (100)
316 PLN02409 serine--glyoxylate am 21.4 6.9E+02 0.015 25.0 9.7 73 51-124 40-114 (401)
317 PRK07786 long-chain-fatty-acid 21.4 6.4E+02 0.014 26.3 9.9 85 45-132 193-280 (542)
318 PF07994 NAD_binding_5: Myo-in 21.3 6.6E+02 0.014 24.0 8.7 76 47-126 127-232 (295)
319 COG4594 FecB ABC-type Fe3+-cit 21.3 4.7E+02 0.01 24.2 7.2 73 58-138 59-132 (310)
320 PRK12582 acyl-CoA synthetase; 21.3 3.5E+02 0.0076 29.1 8.0 78 215-293 79-165 (624)
321 COG2805 PilT Tfp pilus assembl 21.1 7.4E+02 0.016 23.9 8.6 98 20-118 140-248 (353)
322 PRK12476 putative fatty-acid-- 20.9 1E+03 0.022 25.3 12.0 101 196-299 48-156 (612)
323 PRK07503 methionine gamma-lyas 20.8 4.5E+02 0.0098 26.4 8.2 31 91-123 126-156 (403)
324 PTZ00342 acyl-CoA synthetase; 20.7 7.4E+02 0.016 27.5 10.3 116 195-319 74-207 (746)
325 KOG1252 Cystathionine beta-syn 20.6 2.8E+02 0.0061 26.8 6.0 61 66-126 99-159 (362)
326 TIGR02991 ectoine_eutB ectoine 20.6 6.6E+02 0.014 24.2 8.9 55 75-129 71-125 (317)
327 PRK06060 acyl-CoA synthetase; 20.5 6.1E+02 0.013 27.7 9.8 86 45-132 164-251 (705)
328 PRK06234 methionine gamma-lyas 20.4 5.2E+02 0.011 25.9 8.5 55 67-123 100-155 (400)
329 COG2897 SseA Rhodanese-related 20.3 2.6E+02 0.0056 26.6 5.7 55 44-98 202-262 (285)
330 COG2885 OmpA Outer membrane pr 20.1 2.6E+02 0.0056 24.5 5.6 62 15-77 94-161 (190)
331 COG1171 IlvA Threonine dehydra 20.1 8.3E+02 0.018 24.0 9.4 104 29-136 34-139 (347)
332 PRK09224 threonine dehydratase 20.1 7.5E+02 0.016 25.8 9.7 100 30-134 30-131 (504)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.6e-81 Score=622.65 Aligned_cols=510 Identities=37% Similarity=0.584 Sum_probs=428.6
Q ss_pred CCCCChHHHHHHHHHHcCCc-eEEEECC---eeccHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 17 NVPLTPIDFLERAAHVYGDA-TSIIYGT---VRFSWRQTHQICLKLASALAQLK--ISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~el~~~~~~~a~~L~~~g--v~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
..+.+....+.+.+...+++ +.+++.. +.+||+|+++++.++|..|.+.| +++||+|++++||+++++.+++||
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~ 92 (537)
T KOG1176|consen 13 NTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAV 92 (537)
T ss_pred CccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 33334444444455455444 6676654 89999999999999999999876 899999999999999999999999
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
+++|+++.+++|.+.+.++...++.++++++|++......+.+....+. ..++.+......... ..
T Consensus 93 ~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~--------~~i~~l~~~~~~~~~----~~-- 158 (537)
T KOG1176|consen 93 PMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA--------LKIIVLTGDEGVISI----SD-- 158 (537)
T ss_pred HHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC--------CceEEEecccCcccc----cc--
Confidence 9999999999999999999999999999999999999998887766543 233333322110000 00
Q ss_pred CCCCCc-hhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccccc
Q 008535 171 PSGSLD-YNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFR 249 (562)
Q Consensus 171 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~ 249 (562)
...... +..+........ ..+...+|++.+.|||||||.||||++||+++..+.......+.+...++.++.+|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H 236 (537)
T KOG1176|consen 159 LVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFH 236 (537)
T ss_pred ccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHH
Confidence 000011 333333332222 44567799999999999999999999999999999888888888888999999999999
Q ss_pred chhhHHHHHhHhhc-eEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHH
Q 008535 250 CNGWCCTWAMAAVG-GINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 250 ~~gl~~~~~~~~~g-~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
.+|+...+.+.+.+ +++++.+.+++..+++.+++|++|+++++|.++..|++.+.....++++++.+.+||++++++..
T Consensus 237 ~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~ 316 (537)
T KOG1176|consen 237 IYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATL 316 (537)
T ss_pred HhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHH
Confidence 99999988865554 55555567899999999999999999999999999999987777899999999999999999999
Q ss_pred HHHH-hcC-CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeE
Q 008535 329 EQVA-NFG-FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGE 406 (562)
Q Consensus 329 ~~~~-~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Ge 406 (562)
+.++ .++ ..+.+.||+||+++.++.+.+.+. .....+|.+.++. ...+.+ ++|..++.+ +.||
T Consensus 317 ~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-----------~k~~svG~~~~g~-~~~v~~-e~g~~l~~~--~~GE 381 (537)
T KOG1176|consen 317 EKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-----------RKPGSVGRLLPGV-RVKVLD-ETGVSLGPN--QTGE 381 (537)
T ss_pred HHHHHhCCCceEEEeeccccccCceeecCCCcc-----------CcccccCccccce-EEEeeC-CCCCCCCCC--CceE
Confidence 9998 566 889999999999988887654432 2345677777743 444444 578877776 6699
Q ss_pred EEEcchhhhhhhcCCchhhHhhhcc-ceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 407 VMFRANTVMLGYFKNPKATEEAFRN-GWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 407 l~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
||++|++++.||++||+.|++.|.+ |||+|||+|++|+||++||.+|++|+||.+|++|+|.|||++|..||.|.|++|
T Consensus 382 I~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaV 461 (537)
T KOG1176|consen 382 ICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAV 461 (537)
T ss_pred EEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEE
Confidence 9999999999999999999999986 999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
++.+++.+|+.+.|+|+.+++...+.+++.+++++++++|++|..++|++ ||||++||++|+.||+++.+..
T Consensus 462 vgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 462 VGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred EcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999998775 9999999999999999998753
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-78 Score=563.08 Aligned_cols=515 Identities=27% Similarity=0.370 Sum_probs=439.2
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEE--CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIY--GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
-...|+.++|+..++..||+.|++. .+-++||+||.+.++++|.+|.++|+++||+|++..||+.+|+.++|||.++|
T Consensus 47 l~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG 126 (596)
T KOG1177|consen 47 LDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAG 126 (596)
T ss_pred cccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhc
Confidence 3456999999999999999988776 45679999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccc-----hHHHHHHHhhcCCCC----cCCCC---CceeccCCCCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQF-----VEVVQNALDILSPNH----KCDKA---PLLVTIPECDHYQPS 162 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~ 162 (562)
.+.+++||.+..++++..|++.+++++|+...+ ++.+.++...+.... +...+ ..++..++
T Consensus 127 ~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e------- 199 (596)
T KOG1177|consen 127 LVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE------- 199 (596)
T ss_pred eEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC-------
Confidence 999999999999999999999999999987643 334444444332221 11111 12222221
Q ss_pred cccccCCCCCCCCchhhhhhcccCcc----ccC-CCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCC
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKADF----EMM-QPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRD 237 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~ 237 (562)
+....|.+.+++++....... +.. ....++|++.|.|||||||.|||+.+||-+++.++......+++.+
T Consensus 200 -----d~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e 274 (596)
T KOG1177|consen 200 -----DHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNE 274 (596)
T ss_pred -----CCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCc
Confidence 112245566777776553321 111 1246799999999999999999999999999999999999999999
Q ss_pred CCeeeeecccccchhhH-HHHHhHhhceEEEEe-ccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEE
Q 008535 238 MPVFLWTLDMFRCNGWC-CTWAMAAVGGINVCI-RTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVI 315 (562)
Q Consensus 238 ~~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~ 315 (562)
.+++.+..|++|.+|.. ..+.++..|++++++ +.+++.+.++.|+++++|.++++|.+|..|++.++..+.+++++|.
T Consensus 275 ~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~ 354 (596)
T KOG1177|consen 275 KHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRK 354 (596)
T ss_pred ceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhh
Confidence 99999999999999954 678888899999985 4699999999999999999999999999999999999999999999
Q ss_pred EEEeCCCChHHHHHHHH-hcCC-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC
Q 008535 316 IVIAGVLPTIEVLEQVA-NFGF-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT 393 (562)
Q Consensus 316 i~~~g~~l~~~~~~~~~-~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 393 (562)
++.||+++++++++.+. +.+. .+...||+||+++..+...... .....-.++|...+.. +..+++ ..
T Consensus 355 ~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D---------~~~~~~ksVG~~m~h~-Ea~iv~-~~ 423 (596)
T KOG1177|consen 355 GVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGD---------PPEERIKSVGHLMDHY-EAAIVD-KD 423 (596)
T ss_pred heeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCC---------CHHHHHhhhhhccccc-cccccc-CC
Confidence 99999999999999987 4554 4778999999998777654322 1223335677777777 888988 58
Q ss_pred cccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHH
Q 008535 394 MKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEA 472 (562)
Q Consensus 394 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 472 (562)
|..++.+.+ |||+++|+..+.|||++++.|++.. +|.||+|||+|.+|++|.++++||++|+|+.+|++|+|.+||+
T Consensus 424 g~~v~~~~~--Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 424 GSEVPLGTK--GELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred CCccccCCC--ceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 888888855 9999999999999999998888876 5889999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC--CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHH
Q 008535 473 VLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE--ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVL 549 (562)
Q Consensus 473 ~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l 549 (562)
.|.+||.|.++.|++++++..|+.++|+|.++++.. .+.++|+++|+.++..+++|+++.+++ +|+|.+|||+|.++
T Consensus 502 fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFei 581 (596)
T KOG1177|consen 502 FLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEI 581 (596)
T ss_pred HHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHH
Confidence 999999999999999999999999999999998866 488999999999999999999988765 99999999999999
Q ss_pred hhhhhhh
Q 008535 550 RGKVNAT 556 (562)
Q Consensus 550 ~~~~~~~ 556 (562)
+++++..
T Consensus 582 r~~~k~~ 588 (596)
T KOG1177|consen 582 REMSKGH 588 (596)
T ss_pred HHHHHhh
Confidence 9998843
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.2e-76 Score=609.35 Aligned_cols=508 Identities=31% Similarity=0.423 Sum_probs=431.2
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
......++.++|.++++.+|+++|+.+.+.. +||+||.+++.++|+.|++.|+++||+|+|+++|++++++++|||++
T Consensus 6 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~ 85 (534)
T COG0318 6 RMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALR 85 (534)
T ss_pred cccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3456679999999999999999999998877 99999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+|++++|++|.++..++.++++.+++++++++....+........... ...+..........
T Consensus 86 ~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------------ 147 (534)
T COG0318 86 AGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPV------VLVVLLVGDADDRL------------ 147 (534)
T ss_pred cCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCc------ceEEEecccccccc------------
Confidence 999999999999999999999999999999998855555544332210 11111111111000
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC--CCCCCeeeeecccccc
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD--VRDMPVFLWTLDMFRC 250 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~ 250 (562)
. .++.++....+.........+++|+++++|||||||.||||++||+++..+.......+. +.+.|++++++|++|.
T Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 226 (534)
T COG0318 148 P-ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHI 226 (534)
T ss_pred c-ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHH
Confidence 0 234444332222222222256889999999999999999999999999999988888888 8999999999999999
Q ss_pred hhhHHHHHh-HhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccc-eEEEEEeCCCChHH
Q 008535 251 NGWCCTWAM-AAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQR-KVIIVIAGVLPTIE 326 (562)
Q Consensus 251 ~gl~~~~~~-~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~-l~~i~~~g~~l~~~ 326 (562)
+|+...+.+ ++.|++.++.+ .+++..++..+.++++++++++|.++..|+........++++ +|.++.||++++++
T Consensus 227 ~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~ 306 (534)
T COG0318 227 FGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPE 306 (534)
T ss_pred HHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHH
Confidence 999976666 67777777776 599999999999999999999999999999998777776776 99999999999999
Q ss_pred HHHHHH-hcC-CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCce
Q 008535 327 VLEQVA-NFG-FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTL 404 (562)
Q Consensus 327 ~~~~~~-~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 404 (562)
++++++ .++ ..+++.||+||+++.++...... . .......|.+.++. +++|+|.+.+.+.| +++
T Consensus 307 ~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~---------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p---g~v 372 (534)
T COG0318 307 LLERFEERFGPIAILEGYGLTETSPVVTINPPDD-L---------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP---GEV 372 (534)
T ss_pred HHHHHHHHhCCCceEEeecccccCceeecCCCch-h---------hhcCCcccccCCCc-EEEEEeCCCCccCC---CCc
Confidence 999999 566 47999999999987776654322 1 11233447777776 88888886665555 368
Q ss_pred eEEEEcchhhhhhhcCCchhhHhhhcc-ceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeE
Q 008535 405 GEVMFRANTVMLGYFKNPKATEEAFRN-GWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEA 483 (562)
Q Consensus 405 Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 483 (562)
|||+|+||+++.||+++|+.|.+.|.+ |||+|||+|++|++|.++|.||.+|+|+.+|++|+|.+||+++.+||.|.++
T Consensus 373 Gei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~a 452 (534)
T COG0318 373 GEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEA 452 (534)
T ss_pred eEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceE
Confidence 999999999999999999999998886 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCceeEEEEEeCCC--CCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhh
Q 008535 484 AVVGKVDDQLKEVPVAFVKLKEG--REASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 484 ~v~~~~~~~~~~~~v~~v~~~~~--~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~ 555 (562)
+|++++++.+|+.++++++++++ ...+.+++.++++++++.+++|+.+.++ +||+|++||++|+.|++.+.+
T Consensus 453 avvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 453 AVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999999999999876 3457899999999999999999999986 599999999999999999887
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.3e-75 Score=577.85 Aligned_cols=491 Identities=27% Similarity=0.381 Sum_probs=409.3
Q ss_pred HHHHHHHH-cCCceEEEECC-----eeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 25 FLERAAHV-YGDATSIIYGT-----VRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 25 ~l~~~a~~-~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
.++++.+. .+++.|+++.+ +++||+||.+.++++|+.|.+ .|+ +||+|++++|+.+|.++++|||+++|+++
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 46666653 47889988853 679999999999999999987 668 99999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|+.+.++++.+...+++++++++|+++......+...-...... . ...++..... + ..|
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~-~--~~~~iv~~r~----------------~-~~~ 152 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADA-V--LSSVVVVPRL----------------G-LWY 152 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHH-h--hcceEEeccc----------------c-ccH
Confidence 999999999999999999999999998876543321110000000 0 0001111111 1 455
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH-HHhhcCCCCCCeeeeecccccchhhHH-
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA-QISRCDVRDMPVFLWTLDMFRCNGWCC- 255 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~~~pl~~~~gl~~- 255 (562)
.+..+......... +...+|+++++|||||||+||||+++|..+...... ....+.+.++|+++++.+..|++|.+.
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~ 231 (528)
T COG0365 153 DEAVEKASEKFEFE-PLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYS 231 (528)
T ss_pred HHHhhccCCCCCcc-ccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHH
Confidence 55555443333222 267889999999999999999999999976655554 445678889999999999999999886
Q ss_pred HHHhHhhceEEEEecc--C-CHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH
Q 008535 256 TWAMAAVGGINVCIRT--V-SAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA 332 (562)
Q Consensus 256 ~~~~~~~g~~~v~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~ 332 (562)
.+.++..|++.++.+. + +++.+++.|+++++|++++.|..++.|.+....+..++++||.+.+.||+++++.++++.
T Consensus 232 v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~ 311 (528)
T COG0365 232 VFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFY 311 (528)
T ss_pred HHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHH
Confidence 7888899999988752 3 499999999999999999999999999998876678899999999999999999999998
Q ss_pred -hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 333 -NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 333 -~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
.+|+++.+.||+||++++...... +..+...|.|.+++ .++++|++ +++++.+ + |+|+++.
T Consensus 312 ~~~g~~i~d~~gqTEtg~~~~~~~~-------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~ 373 (528)
T COG0365 312 SALGVWILDIYGQTETGMGFIAGRP-------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRL 373 (528)
T ss_pred HHhCCCEeccccccccCccccCCCC-------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeC
Confidence 569999999999999855444321 22334558888888 88999986 8888776 5 9999998
Q ss_pred h--hhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeee
Q 008535 412 N--TVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKV 489 (562)
Q Consensus 412 ~--~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 489 (562)
+ +.+.+||++++.+.+.|.+.||.|||.+++|+||.++|.||.||+||+.|.++.+.|||++|.+||.|.||+|++.+
T Consensus 374 ~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~p 453 (528)
T COG0365 374 PWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVP 453 (528)
T ss_pred CCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEecc
Confidence 7 89999999999999998777999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEeCCCCCCC--HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 490 DDQLKEVPVAFVKLKEGREAS--PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 490 ~~~~~~~~v~~v~~~~~~~~~--~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
++..|+.+++||+++++...+ .++|++++++.+.+++.|+.|.+++ ||||.||||.|+.||+.+.+
T Consensus 454 d~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 454 DPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 999999999999999875433 4677778877888899999999876 99999999999999999884
No 5
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2e-71 Score=584.85 Aligned_cols=532 Identities=45% Similarity=0.801 Sum_probs=427.5
Q ss_pred ccCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhc
Q 008535 14 SANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMA 93 (562)
Q Consensus 14 ~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 93 (562)
..++++.|+.++|++.++.+|+++|+.+.+.++||+||+++++++|+.|.++|+++||+|+++++|++++++++|||+++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 8 EANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred ccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 34456679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCC
Q 008535 94 GAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSG 173 (562)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (562)
|++++|+++..+.+++.++++.++++++|++.+..+.+........... ......++.++...... . ....
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~-~~~~ 158 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSED-SNLNLPVIFIHEIDFPK-------R-PSSE 158 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccc-cccCceEEEeccccccc-------C-Cccc
Confidence 9999999999999999999999999999999887766665544322100 00011233332211000 0 0011
Q ss_pred CCchhhhhhcccCccc----cCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccccc
Q 008535 174 SLDYNDLLEMGKADFE----MMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFR 249 (562)
Q Consensus 174 ~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~ 249 (562)
..++.++.+....... ......++++++|+|||||||.||+|.++|+++..........+.+...+++++.+|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 238 (579)
T PLN03102 159 ELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFH 238 (579)
T ss_pred ccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhh
Confidence 2344444432221111 011234679999999999999999999999997666555555666777889999999999
Q ss_pred chhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHH
Q 008535 250 CNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLE 329 (562)
Q Consensus 250 ~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~ 329 (562)
..++...+.++..|+++++.+.+++..+++.|+++++|++.++|+++..|++.........++++.+++||++++++..+
T Consensus 239 ~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 318 (579)
T PLN03102 239 CNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVK 318 (579)
T ss_pred hcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHH
Confidence 99988888888899999998888999999999999999999999999999887544444556788899999999999999
Q ss_pred HHHhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEE
Q 008535 330 QVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMF 409 (562)
Q Consensus 330 ~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v 409 (562)
.+++++.++++.||+||+++.++.+.....+.... ...........|.++.+...+++.+.+.+++++.++++.|||++
T Consensus 319 ~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl~v 397 (579)
T PLN03102 319 KVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLP-ENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEIVI 397 (579)
T ss_pred HHHHcCCeEEeecCccccCccccccccccccccCC-cccccccccCCCcccccccceEEeccccccccCCCCCCceEEEE
Confidence 99888999999999999987655432211110000 00000111234555566667888887777777765556799999
Q ss_pred cchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeee
Q 008535 410 RANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKV 489 (562)
Q Consensus 410 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 489 (562)
+|+.++.||+++++.+...|.+|||+|||+|++|+||.+++.||.+|+|+.+|.+|+|.+||++|.++|.|.+++|++.+
T Consensus 398 ~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~ 477 (579)
T PLN03102 398 KGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMP 477 (579)
T ss_pred ECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEeCCCCCC----------CHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 490 DDQLKEVPVAFVKLKEGREA----------SPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 490 ~~~~~~~~v~~v~~~~~~~~----------~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
++..++.++++|++.++... ...+++++++++++.|++|..+++.+ ||+|++||++|++|++++++
T Consensus 478 ~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 478 HPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred CccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 99888999999998765432 35689999999999999999988655 99999999999999998765
No 6
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-71 Score=583.62 Aligned_cols=495 Identities=25% Similarity=0.311 Sum_probs=418.1
Q ss_pred ChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec
Q 008535 21 TPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL 100 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (562)
++.+++++.++.+|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhh
Q 008535 101 NTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDL 180 (562)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
++.++.+++.++++.+++++++++.+..+.+......... ...+........ ....+...+.++
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~~~~~~ 193 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGR------LRAWGGNPDDDE----------PSGSTDETLDDL 193 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhcccccc------ceEEEEecCccc----------cCCcCcccHHHH
Confidence 9999999999999999999999998776655443211110 111111111100 001233455555
Q ss_pred hhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhH
Q 008535 181 LEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMA 260 (562)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~ 260 (562)
....... ..+...+++++++|||||||.||+|.++|+++..........+++..+++++...|++|.+|+...+.++
T Consensus 194 ~~~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l 270 (549)
T PRK07788 194 IAGSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAM 270 (549)
T ss_pred hcCCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHH
Confidence 5432221 1223456889999999999999999999999988878877888899999999999999999998888888
Q ss_pred hhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHH-hcCCe
Q 008535 261 AVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVA-NFGFN 337 (562)
Q Consensus 261 ~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~ 337 (562)
..|+++++...+++..+++.++++++|++.++|++++.|++.... ....++++|.+++||+++++++.+.++ .++..
T Consensus 271 ~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 350 (549)
T PRK07788 271 ALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPV 350 (549)
T ss_pred HhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCcc
Confidence 899999888889999999999999999999999999999887654 445688999999999999999999998 56889
Q ss_pred eeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhh
Q 008535 338 IRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLG 417 (562)
Q Consensus 338 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 417 (562)
+++.||+||++..+..... ........+|.|.++. .+++++. ++.+++.| +.|||+++|+.++.|
T Consensus 351 l~~~YG~TE~~~~~~~~~~-----------~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~g 415 (549)
T PRK07788 351 LYNLYGSTEVAFATIATPE-----------DLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEG 415 (549)
T ss_pred ceeccCcchhchhhccChh-----------hhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCcccc
Confidence 9999999998755443210 0111234678887777 7888876 56777665 789999999999999
Q ss_pred hcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCcee
Q 008535 418 YFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVP 497 (562)
Q Consensus 418 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 497 (562)
|++++.. .+.+|||+|||+|++|++|.+++.||.||+||++|.+|+|.+||++|.++|+|.+++|++.+++..++.+
T Consensus 416 Y~~~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~ 492 (549)
T PRK07788 416 YTDGRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRL 492 (549)
T ss_pred ccCCCcc---cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEE
Confidence 9998765 3458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhh
Q 008535 498 VAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 498 v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~ 552 (562)
+++|++.++...+.++++++++++++.|++|..+.+++ ||+|++||++|++|+++
T Consensus 493 ~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 493 RAFVVKAPGAALDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999988777788999999999999999999888655 99999999999999864
No 7
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-72 Score=511.26 Aligned_cols=506 Identities=25% Similarity=0.363 Sum_probs=443.3
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
-|...++.++|.++|.++|+++|++++++.+||+||.+++.++|..|.+.|+++||+|++..||..+|++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccch-----HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFV-----EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
.+|.--|.....+|..+.+..+++.+|.+.... ....+.....+. ++.+++.++.+..
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~t------lr~v~v~ge~~~~----------- 166 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPT------LRHVIVAGEAEHP----------- 166 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCc------ceEEEEccCCCCc-----------
Confidence 999998999999999999999999999876432 223323222221 4555555544321
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccc
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 250 (562)
......+...........+.++++++++..+.||||.||.++.||.....+.....+.+++.+.+++++.+|..|.
T Consensus 167 ----~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHN 242 (542)
T COG1021 167 ----SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHN 242 (542)
T ss_pred ----chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccC
Confidence 1222233333333344455677899999999999999999999999999999999999999999999999999999
Q ss_pred hhhHH--HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHH
Q 008535 251 NGWCC--TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 251 ~gl~~--~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
+.+.+ .++.++.||++|+.++.+|+..+.+|+++++|+...+|.....|++..+....+++|+|.+-+||++++++..
T Consensus 243 fplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~A 322 (542)
T COG1021 243 FPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLA 322 (542)
T ss_pred CCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHH
Confidence 99874 7888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 329 EQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 329 ~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
+++. .+|+.+-+.|||.|.- +.++.. +...+......|.|..+..+++|+|. +|+++++| |.|+|
T Consensus 323 rrv~~~lgC~LQQVFGMAEGL--vnyTRL---------DDp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~L 388 (542)
T COG1021 323 RRVPAVLGCQLQQVFGMAEGL--VNYTRL---------DDPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGEL 388 (542)
T ss_pred hhchhhhCchHHHHhhhhhhh--hccccc---------CCchHheeecCCCcCCCcceeEEecC-CCCCCCCC--Cccee
Confidence 9998 7899999999999953 333332 22334445788999999999999997 78888887 77999
Q ss_pred EEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 408 MFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
..+||..++|||+.|+-+.+.|. +|||+|||+.++|+||++.+.||.+|+|+.+|+||-.+|||+.|+.||.|.++.++
T Consensus 389 ltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlV 468 (542)
T COG1021 389 LTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALV 468 (542)
T ss_pred eecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhh
Confidence 99999999999999999999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
..+++..|++.+++++.++. .....++++++++. +..|++|++|.+++ +|.|+-|||+|+.|++.+....
T Consensus 469 ampDelLGEksCAfiv~~~~-~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 469 AMPDELLGEKSCAFIVVKEP-PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred cCchhhcCcceeEEEEecCC-CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 99999999999999998764 37888999999876 89999999999776 9999999999999998876543
No 8
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.1e-70 Score=578.75 Aligned_cols=521 Identities=25% Similarity=0.327 Sum_probs=414.5
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
++..+.|+.++|++.++.+|+++|+++.++++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 46677899999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHh-hcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALD-ILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSG 173 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (562)
++++|+++.++.+++.++++.+++++++++............ .+.. ....+...+..... ......
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~-------~~~~~~ 148 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPS------LMWQVFLESPSSSV-------FIFLNS 148 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCc------eeEEEEecCccccc-------ccchhh
Confidence 999999999999999999999999999998765333322211 0100 11122222111000 000000
Q ss_pred CCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhh
Q 008535 174 SLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGW 253 (562)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl 253 (562)
.....++...............++++++++|||||||.||||.++|+++..+.......+++.++|+++...|++|.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 228 (563)
T PLN02860 149 FLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 228 (563)
T ss_pred ccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccH
Confidence 11111111110000011112356899999999999999999999999998877777777889999999999999999999
Q ss_pred HHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHH
Q 008535 254 CCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 254 ~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~ 331 (562)
...+.++..|+++++.+.+++..+++.++++++|+++++|.++..|++.... ....++++|.+++||+++++++.+.+
T Consensus 229 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~ 308 (563)
T PLN02860 229 SSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDA 308 (563)
T ss_pred HHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHH
Confidence 8888899999999999899999999999999999999999999999876432 22457899999999999999999999
Q ss_pred Hh-c-CCeeeccccCccccCcccccccCCCCCCCc------C-----CccccccccccCccccccccceecccCCccccc
Q 008535 332 AN-F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSA------L-----DHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVP 398 (562)
Q Consensus 332 ~~-~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~------~-----~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 398 (562)
++ + +.++++.||+||+++.++............ . ..........+|.|.++. .+++.+.+
T Consensus 309 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------ 381 (563)
T PLN02860 309 KKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------ 381 (563)
T ss_pred HHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------
Confidence 84 4 789999999999976554332211100000 0 000011123567777766 67776653
Q ss_pred CCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 399 HDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 399 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
.++.|||+++|+.++.||+++++.+...|. +|||+|||+|++|++|.+++.||.+|+||++|.+|+|.+||+++.++
T Consensus 382 --~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 382 --SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred --CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhC
Confidence 236799999999999999999999888874 89999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEeeeCCCCCceeEEEEEeCCCC--------------CCCHHHHHHHHhc-cCCCCCCCcEEEe-ec-ccCCC
Q 008535 478 PKVLEAAVVGKVDDQLKEVPVAFVKLKEGR--------------EASPEELVTFCGD-ELPSCMVPRAIFF-ED-IPVNS 540 (562)
Q Consensus 478 ~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~--------------~~~~~~l~~~~~~-~l~~~~~p~~i~~-~~-lP~t~ 540 (562)
|+|.+++|++.+++..++.++++|++.++. ....+++++++++ .+++|++|+.+++ .+ ||+|+
T Consensus 460 p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~ 539 (563)
T PLN02860 460 PGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTT 539 (563)
T ss_pred CCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCc
Confidence 999999999999999999999999987652 2456789999987 5999999998764 44 99999
Q ss_pred CCcchHHHHhhhhhhhc
Q 008535 541 TGKVQKFVLRGKVNATA 557 (562)
Q Consensus 541 ~GKv~r~~l~~~~~~~~ 557 (562)
+||++|++|++++.+..
T Consensus 540 ~GKi~r~~L~~~~~~~~ 556 (563)
T PLN02860 540 TGKIRRDEVRREVLSHL 556 (563)
T ss_pred ccchhHHHHHHHHHHHH
Confidence 99999999999986543
No 9
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-70 Score=583.03 Aligned_cols=516 Identities=20% Similarity=0.278 Sum_probs=402.5
Q ss_pred hHHHHHHHHHH--cCCceEEEEC------CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhc
Q 008535 22 PIDFLERAAHV--YGDATSIIYG------TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMA 93 (562)
Q Consensus 22 i~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 93 (562)
...+|+++++. +|+++|+++. .+++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 61 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~ 140 (647)
T PTZ00237 61 CYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARI 140 (647)
T ss_pred HHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 34677777754 7999999873 357999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCCCCHHHHHHHHhhCCceEEEEecc---------chHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcc
Q 008535 94 GAVLSALNTRLDSATLASILRQLEAKIIFVDYQ---------FVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTC 164 (562)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (562)
|++++|+++.++.+++.+++++++++++|+++. ..+.+..+....... ...++.+...........
T Consensus 141 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vi~~~~~~~~~~~~~ 215 (647)
T PTZ00237 141 GATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFK-----PSNVITLFRNDITSESDL 215 (647)
T ss_pred CcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCC-----CCEEEEEEcCCccccccc
Confidence 999999999999999999999999999999752 222333332211100 122332211100000000
Q ss_pred cc--cCCCCCCCCchhhhhhccc----CccccCCCCCCCCceEEEeccCCCCCCCceEeechh-HHHHHHHHHhhcCCCC
Q 008535 165 SV--ANNFPSGSLDYNDLLEMGK----ADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRG-AYLNSLAQISRCDVRD 237 (562)
Q Consensus 165 ~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~-l~~~~~~~~~~~~~~~ 237 (562)
.. ......+...|.+++.... .......+..++|+++|+|||||||.||||+++|.+ +..........+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~ 295 (647)
T PTZ00237 216 KKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDI 295 (647)
T ss_pred ccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCC
Confidence 00 0000012244555543211 111112234678999999999999999999999998 4443333344556777
Q ss_pred CCeeeeecccccchhhHHHHHhHhhceEEEEecc--CC----HHHHHHHHHhcCeEEEEcchHHHHHHHhcccc-----c
Q 008535 238 MPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT--VS----AKIIFDSILIHKVTHLCGQPRILNMIANASAS-----D 306 (562)
Q Consensus 238 ~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-----~ 306 (562)
++++++..|++|+.+...++.++..|+++++.+. +. +..+++.++++++|+++++|.+++.|++.... .
T Consensus 296 ~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 375 (647)
T PTZ00237 296 PTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRS 375 (647)
T ss_pred CcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccccc
Confidence 8999999999998877778888999999988753 22 67899999999999999999999999875321 2
Q ss_pred cccccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCcccccccc
Q 008535 307 QNQLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQG 385 (562)
Q Consensus 307 ~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 385 (562)
..+++++|.++++|+++++++.++++ .+++++++.||+||+++..+.... ........+|.|.++. .
T Consensus 376 ~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~-----------~~~~~~~s~G~p~~g~-~ 443 (647)
T PTZ00237 376 KYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYG-----------HINIPYNATGVPSIFI-K 443 (647)
T ss_pred ccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCC-----------CCCCCCCCCccCcCCc-e
Confidence 34688999999999999999999988 469999999999999865443210 0011124677777777 7
Q ss_pred ceecccCCcccccCCCCceeEEEEcch---hhhhhhcCCchhhHhhhc--cceeeeCceeEEcCCCcEEEeccccceeec
Q 008535 386 VDVKQQNTMKSVPHDGKTLGEVMFRAN---TVMLGYFKNPKATEEAFR--NGWYHTGDLAVRNPDGYVQMKDRRKDIIIS 460 (562)
Q Consensus 386 ~~i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~ 460 (562)
++|++. ++.+++.+ +.|||++++| +++.|||++++.+...|. +|||+|||+|++|++|.+++.||+||+||+
T Consensus 444 ~~i~d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~ 520 (647)
T PTZ00237 444 PSILSE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKI 520 (647)
T ss_pred EEEECC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEE
Confidence 888886 77777765 6799999986 789999999999888775 799999999999999999999999999999
Q ss_pred CCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC---CCCH----HHHHHHHhccCCCCCCCcEEEe
Q 008535 461 GAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR---EASP----EELVTFCGDELPSCMVPRAIFF 533 (562)
Q Consensus 461 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~---~~~~----~~l~~~~~~~l~~~~~p~~i~~ 533 (562)
+|++|+|.+||++|.+||.|.+++|++++++..++.++++|+++++. ..+. ++|+++++++++++++|+.|++
T Consensus 521 ~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~ 600 (647)
T PTZ00237 521 SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIII 600 (647)
T ss_pred CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEE
Confidence 99999999999999999999999999999999999999999987432 2232 5677888999999999999887
Q ss_pred ec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 534 ED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 534 ~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
++ ||+|++||++|+.|++++++..
T Consensus 601 v~~lP~T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 601 VNQLPKTKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred cCCCCCCCCccEeHHHHHHHHcCCC
Confidence 65 9999999999999999987654
No 10
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4.8e-70 Score=579.95 Aligned_cols=518 Identities=20% Similarity=0.235 Sum_probs=410.1
Q ss_pred CCCh-HHHHHHHHHHcCCceEEEE------CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 19 PLTP-IDFLERAAHVYGDATSIIY------GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 19 ~~ti-~~~l~~~a~~~p~~~a~~~------~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
..|+ .++|+++++.+|+++|+++ .++++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 50 ~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~ 129 (628)
T TIGR02316 50 RTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACA 129 (628)
T ss_pred EeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3444 4678888888999999987 23689999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccc---------hHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQF---------VEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS 162 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
++|++++|+++.++.+++.+++++++++++|+++.. .+.+..+....... ...++.++.....
T Consensus 130 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vi~~~~~~~~--- 201 (628)
T TIGR02316 130 RIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHP-----PPHVLLVDRGLAP--- 201 (628)
T ss_pred HhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCC-----CCEEEEEeCCCCC---
Confidence 999999999999999999999999999999997643 22222222211110 2233333321100
Q ss_pred cccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHH-HHHHHhhcCCCCCCee
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLN-SLAQISRCDVRDMPVF 241 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~ 241 (562)
..........+.++...............++++++|+|||||||.||||+++|.++..+ .......++++++|++
T Consensus 202 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~ 277 (628)
T TIGR02316 202 ----MRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVM 277 (628)
T ss_pred ----cCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 00001112345554443221111112245689999999999999999999999997543 3445556788999999
Q ss_pred eeecccccchhhH-HHHHhHhhceEEEEec----cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceE
Q 008535 242 LWTLDMFRCNGWC-CTWAMAAVGGINVCIR----TVSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKV 314 (562)
Q Consensus 242 l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~ 314 (562)
++..|++|..++. .++.++..|+++++.+ .+++..+++.++++++|+++++|.+++.|.+... ....+++++|
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr 357 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLH 357 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCcccee
Confidence 9999999999865 5777888999988875 3578999999999999999999999999987643 2345688999
Q ss_pred EEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC
Q 008535 315 IIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT 393 (562)
Q Consensus 315 ~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 393 (562)
.+++||++++++..++++ .++..+++.||+||++..++...... .........+|.|.++. .++|++.++
T Consensus 358 ~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~--------~~~~~~~gs~G~p~~g~-~v~i~d~~~ 428 (628)
T TIGR02316 358 WLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGL--------DLKPVKLGSPGLPMYGY-HLRVLDEAT 428 (628)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCC--------CcCCCCCCCcccCcCCc-eEEEEECCC
Confidence 999999999999999887 56889999999999985443321100 00111234567777777 778888767
Q ss_pred cccccCCCCceeEEEEcch---hhhhhhcCCchhhHhhh----ccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 394 MKSVPHDGKTLGEVMFRAN---TVMLGYFKNPKATEEAF----RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 394 ~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
+++++.+ +.|||+++|| +.+.+|+++++.+.+.+ .++||+|||+|++|+||.++++||.||+||++|.+|+
T Consensus 429 g~~~~~g--~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~ 506 (628)
T TIGR02316 429 GRPCGPN--EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLG 506 (628)
T ss_pred CCCCCCC--CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeC
Confidence 8888766 6799999998 57789999987776654 4679999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHhccCCCCCCCcEEEeec-cc
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREA--------SPEELVTFCGDELPSCMVPRAIFFED-IP 537 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~--------~~~~l~~~~~~~l~~~~~p~~i~~~~-lP 537 (562)
|.+||++|.++|.|.+++|++++++..++.++++|++.++... ..++|++++++++++|++|+.+++++ ||
T Consensus 507 ~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP 586 (628)
T TIGR02316 507 TREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALP 586 (628)
T ss_pred HHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCC
Confidence 9999999999999999999999999999999999998765431 34689999999999999999988665 99
Q ss_pred CCCCCcchHHHHhhhhhhhccc
Q 008535 538 VNSTGKVQKFVLRGKVNATAVG 559 (562)
Q Consensus 538 ~t~~GKv~r~~l~~~~~~~~~~ 559 (562)
+|+|||++|+.|++++++...+
T Consensus 587 ~t~sGKi~r~~L~~~~~~~~~~ 608 (628)
T TIGR02316 587 KTRSGKLLRRSIQALAEGRDPG 608 (628)
T ss_pred CCCchHHHHHHHHHHHcCCCCC
Confidence 9999999999999998765533
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.2e-69 Score=578.18 Aligned_cols=519 Identities=20% Similarity=0.228 Sum_probs=407.9
Q ss_pred CCCCh-HHHHHHHHH-HcCCceEEEEC------CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Q 008535 18 VPLTP-IDFLERAAH-VYGDATSIIYG------TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFA 89 (562)
Q Consensus 18 ~~~ti-~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA 89 (562)
...|+ ..+|+++++ .+|+++|+++. .+++||+||.+++.++|+.|.+.|+++||+|++++||++++++++||
T Consensus 85 ~~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 85 GKTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred CEeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 44566 467777775 48999999873 26899999999999999999999999999999999999999999999
Q ss_pred hhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH---------HHHHHHhhcCCCCcCCCCCceeccCCCCCCC
Q 008535 90 VPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE---------VVQNALDILSPNHKCDKAPLLVTIPECDHYQ 160 (562)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (562)
|+++|++++|+++.++.+++..++++++++++|++..... .+........... .....++........
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 241 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNG--VSVGICLTYENQLAM- 241 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccC--CCccEEEEecccccc-
Confidence 9999999999999999999999999999999999876432 1222211110000 001111111111000
Q ss_pred CCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHH-HHHHHhhcCCCCCC
Q 008535 161 PSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLN-SLAQISRCDVRDMP 239 (562)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~ 239 (562)
.. ............|.++....+. ........++|+++|+|||||||.||||+++|++++.. .......++++++|
T Consensus 242 -~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d 318 (666)
T PLN02654 242 -KR-EDTKWQEGRDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTD 318 (666)
T ss_pred -cc-cccccccCCcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCc
Confidence 00 0000000111234444322211 11112246789999999999999999999999997543 34455678899999
Q ss_pred eeeeecccccchhhHH-HHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccc
Q 008535 240 VFLWTLDMFRCNGWCC-TWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQR 312 (562)
Q Consensus 240 ~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~ 312 (562)
++++..|++|.+|... ++.+++.|+++++.+. +++..+++.|+++++|+++++|.+++.|.+... ....++++
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~ 398 (666)
T PLN02654 319 VYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKS 398 (666)
T ss_pred EEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhh
Confidence 9999999999998754 6777889999988753 589999999999999999999999999988653 23456889
Q ss_pred eEEEEEeCCCChHHHHHHHH-hcC---CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCcccccccccee
Q 008535 313 KVIIVIAGVLPTIEVLEQVA-NFG---FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDV 388 (562)
Q Consensus 313 l~~i~~~g~~l~~~~~~~~~-~~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i 388 (562)
+|.++++|++++++..+++. .+| +++.+.||+||+++..+.... ......+..+|.|.++. .++|
T Consensus 399 Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~----------~~~~~~~gs~G~p~~g~-~v~i 467 (666)
T PLN02654 399 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP----------GAWPQKPGSATFPFFGV-QPVI 467 (666)
T ss_pred eeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCC----------CCCCCCCCccCCCCCCc-eEEE
Confidence 99999999999999999887 556 689999999999876553211 00112335678888887 7888
Q ss_pred cccCCcccccCCCCceeEEEEcc--hhhhhhhcCCchhhHhhh---ccceeeeCceeEEcCCCcEEEeccccceeecCCe
Q 008535 389 KQQNTMKSVPHDGKTLGEVMFRA--NTVMLGYFKNPKATEEAF---RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAE 463 (562)
Q Consensus 389 ~~~~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~ 463 (562)
+|. ++++++.+ +.|||++++ |+++.|||++++.+...| .+|||+|||+|++|+||.+++.||+||+||++|.
T Consensus 468 ~d~-~g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ 544 (666)
T PLN02654 468 VDE-KGKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGH 544 (666)
T ss_pred ECC-CCCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCE
Confidence 875 56666544 679999999 789999999998887765 2799999999999999999999999999999999
Q ss_pred EechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCH---HHHHHHHhccCCCCCCCcEEEeec-ccCC
Q 008535 464 IISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASP---EELVTFCGDELPSCMVPRAIFFED-IPVN 539 (562)
Q Consensus 464 ~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~---~~l~~~~~~~l~~~~~p~~i~~~~-lP~t 539 (562)
+|+|.+||++|.+||.|.+++|++++++..|+.++++|+++++...+. ++|+++++++++.+++|+.+++++ ||+|
T Consensus 545 ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T 624 (666)
T PLN02654 545 RIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKT 624 (666)
T ss_pred EECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCC
Confidence 999999999999999999999999999999999999999988754433 478899999999999999988765 9999
Q ss_pred CCCcchHHHHhhhhhhh
Q 008535 540 STGKVQKFVLRGKVNAT 556 (562)
Q Consensus 540 ~~GKv~r~~l~~~~~~~ 556 (562)
++||++|+.|++.+.++
T Consensus 625 ~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 625 RSGKIMRRILRKIASRQ 641 (666)
T ss_pred CCcCchHHHHHHHHcCC
Confidence 99999999999998764
No 12
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=6.7e-69 Score=570.59 Aligned_cols=518 Identities=24% Similarity=0.327 Sum_probs=412.3
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEE--------CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIY--------GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHF 88 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~--------~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 88 (562)
..+.|+.++|++.++.+|+++|+.+ ..+++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4567999999999999999999986 24689999999999999999999999999999999999999999999
Q ss_pred HhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch-----HHHHHHHhhcCCCCcCCCCCceeccCCCCCC-CCC
Q 008535 89 AVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV-----EVVQNALDILSPNHKCDKAPLLVTIPECDHY-QPS 162 (562)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 162 (562)
||+++| +++|+++.++.+++.++++.+++++++++.... +.+......... ...++.++..... .+.
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~ 174 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPE------LRTVVEVDLARYLPGPK 174 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCc------ceeEEEecCcccccccc
Confidence 999999 579999999999999999999999999986542 223222222111 2333333322100 000
Q ss_pred cccc---cCCCCCCCCchhhhhhcccCcc-ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCC
Q 008535 163 TCSV---ANNFPSGSLDYNDLLEMGKADF-EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDM 238 (562)
Q Consensus 163 ~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 238 (562)
.... ......+...+.+.+...+... .......++++++++|||||||.||+|.+||+++..+.......+.+.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~ 254 (632)
T PRK07529 175 RLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPG 254 (632)
T ss_pred cccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCC
Confidence 0000 0001123344555444433221 11223467899999999999999999999999998888777777888999
Q ss_pred CeeeeecccccchhhH-HHHHhHhhceEEEEeccC---C---HHHHHHHHHhcCeEEEEcchHHHHHHHhcccccccccc
Q 008535 239 PVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIRTV---S---AKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQ 311 (562)
Q Consensus 239 ~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~---~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~ 311 (562)
+++++.+|++|.+++. .++.++..|+++++.++. + ...+++.++++++|++.++|.++..|++.... ..+++
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~ 333 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDIS 333 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCcc
Confidence 9999999999999876 467778888888886531 1 36788999999999999999999999886532 24688
Q ss_pred ceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecc
Q 008535 312 RKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQ 390 (562)
Q Consensus 312 ~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~ 390 (562)
++|.+++||+++++++.+.|+ .+++++++.||+||++..+..+... .......+|.+.+.. .++++.
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~~svG~~~p~~-~v~i~~ 401 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD-----------GERRIGSVGLRLPYQ-RVRVVI 401 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc-----------ccccCCCcccccCCc-eEEEEE
Confidence 999999999999999999998 5699999999999997655433210 111234567777666 677753
Q ss_pred cC-Cc---ccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 391 QN-TM---KSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 391 ~~-~~---~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
.+ ++ .+++.+ +.|||+|+|++++.||++++......+.+|||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 402 ~d~~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~ 479 (632)
T PRK07529 402 LDDAGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNID 479 (632)
T ss_pred cCCCCcccccCCCC--CceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEEC
Confidence 32 33 455555 7799999999999999987654433336899999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCC-CCCCCcEEEeec-ccCCCCCcc
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELP-SCMVPRAIFFED-IPVNSTGKV 544 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~~~-lP~t~~GKv 544 (562)
|.+||+.|.++|.|.+++|++.+++..++.++++|++.++...+.++++++++++++ .+++|+.+.+.+ ||+|++||+
T Consensus 480 p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi 559 (632)
T PRK07529 480 PAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKI 559 (632)
T ss_pred HHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcc
Confidence 999999999999999999999999999999999999998877888999999999986 579999988655 999999999
Q ss_pred hHHHHhhhhhhh
Q 008535 545 QKFVLRGKVNAT 556 (562)
Q Consensus 545 ~r~~l~~~~~~~ 556 (562)
+|++|++.+..+
T Consensus 560 ~r~~Lr~~~~~~ 571 (632)
T PRK07529 560 FKPALRRDAIRR 571 (632)
T ss_pred cHHHHHHHHHHH
Confidence 999999887654
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2e-68 Score=568.62 Aligned_cols=507 Identities=24% Similarity=0.306 Sum_probs=407.0
Q ss_pred HHHHHHHHHHcCCceEEEECC------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 23 IDFLERAAHVYGDATSIIYGT------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
..+|+++++.+|+++|+++.+ +++||+||.+++.++|+.|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 139 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAI 139 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 467778888899999998643 47999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccch---------HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccccc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFV---------EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVA 167 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
++|+++.++.+++.++++.++++++|+++... ..+.......+.. ...++.+.......
T Consensus 140 ~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------- 207 (625)
T TIGR02188 140 HSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVS-----VEHVLVVRRTGNPV------- 207 (625)
T ss_pred EeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCC-----ccEEEEEcCCCCCc-------
Confidence 99999999999999999999999999987532 2233332222100 22233332111000
Q ss_pred CCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH-HHhhcCCCCCCeeeeecc
Q 008535 168 NNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA-QISRCDVRDMPVFLWTLD 246 (562)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~~~p 246 (562)
.........+.++....... .......++++++|+|||||||.||||+++|+++..+... ....+++.++|++++..|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 286 (625)
T TIGR02188 208 PWVEGRDVWWHDLMAKASAY-CEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTAD 286 (625)
T ss_pred CccccccccHHHHHhhcCCC-CCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCC
Confidence 00001123344544432221 1122356789999999999999999999999997655433 444568889999999999
Q ss_pred cccchhhH-HHHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEe
Q 008535 247 MFRCNGWC-CTWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIA 319 (562)
Q Consensus 247 l~~~~gl~-~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~ 319 (562)
++|..+.. .++.++..|+++++.+. +++..+++.++++++|+++++|.+++.|.+.... ...+++++|.++++
T Consensus 287 ~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~ 366 (625)
T TIGR02188 287 VGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSV 366 (625)
T ss_pred chhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEe
Confidence 99998865 46777889999888752 4799999999999999999999999999886532 23468899999999
Q ss_pred CCCChHHHHHHHHh-cC---CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcc
Q 008535 320 GVLPTIEVLEQVAN-FG---FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMK 395 (562)
Q Consensus 320 g~~l~~~~~~~~~~-~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 395 (562)
|++++++..+++.+ ++ +++++.||+||+++.++..... .....+..+|.|.++. .+++++. +++
T Consensus 367 G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~~~~~G~p~~g~-~~~i~d~-~g~ 434 (625)
T TIGR02188 367 GEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG----------ATPTKPGSATLPFFGI-EPAVVDE-EGN 434 (625)
T ss_pred cCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC----------CCCcCCCcccCCcCCc-eEEEECC-CCC
Confidence 99999999998874 43 7899999999998765432211 0112234678888877 8888884 677
Q ss_pred ccc-CCCCceeEEEEcc--hhhhhhhcCCchhhHhhh---ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHH
Q 008535 396 SVP-HDGKTLGEVMFRA--NTVMLGYFKNPKATEEAF---RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLE 469 (562)
Q Consensus 396 ~~~-~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 469 (562)
+++ .+ +.|||+|+| |+++.|||++++.+...+ .+|||+|||+|++|+||.+++.||+||+||++|++|+|.+
T Consensus 435 ~~~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~e 512 (625)
T TIGR02188 435 PVEGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAE 512 (625)
T ss_pred CCCCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHH
Confidence 776 44 679999999 589999999998777765 3789999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC---HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcch
Q 008535 470 VEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS---PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQ 545 (562)
Q Consensus 470 iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~ 545 (562)
||++|.++|.|.+++|++.+++..++.++++|++.++...+ .++++++++++++.+++|+.|.+++ ||+|++||++
T Consensus 513 IE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~ 592 (625)
T TIGR02188 513 IESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIM 592 (625)
T ss_pred HHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccch
Confidence 99999999999999999999999999999999998775543 3689999999999999999988655 9999999999
Q ss_pred HHHHhhhhhhh
Q 008535 546 KFVLRGKVNAT 556 (562)
Q Consensus 546 r~~l~~~~~~~ 556 (562)
|+.|++++++.
T Consensus 593 r~~l~~~~~~~ 603 (625)
T TIGR02188 593 RRLLRKIAAGE 603 (625)
T ss_pred HHHHHHHHcCC
Confidence 99999998765
No 14
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=2.4e-68 Score=561.40 Aligned_cols=551 Identities=46% Similarity=0.788 Sum_probs=435.1
Q ss_pred CcccccCccccccccCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 008535 1 MAMECLGGRLCSASANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI 80 (562)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~ 80 (562)
|+-+..-++..+.++++.+.|+...+++.++.+|+++|+.+.+.++||+||.+++.++|..|.+.|+++||+|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~ 80 (567)
T PLN02479 1 MAKERDIDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNI 80 (567)
T ss_pred CccccccccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc
Confidence 45566677777878888888999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCC-cCCCCCceeccCCCCCC
Q 008535 81 PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNH-KCDKAPLLVTIPECDHY 159 (562)
Q Consensus 81 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 159 (562)
++++++++||+++|++++|+++..+.+++.++++.++++++++++...+........+.... .....+.++.++.....
T Consensus 81 ~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (567)
T PLN02479 81 PAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCD 160 (567)
T ss_pred HHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCC
Confidence 99999999999999999999999999999999999999999999887665554433221100 00001223333221110
Q ss_pred CCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCC
Q 008535 160 QPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMP 239 (562)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~ 239 (562)
. ... ......+...+.+++...........+...+++++++|||||||.||||.+||+++..........+++..++
T Consensus 161 ~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~ 237 (567)
T PLN02479 161 P-KSL--QYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGA 237 (567)
T ss_pred c-ccc--ccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCC
Confidence 0 000 0001123344555554332211111122345788899999999999999999999877766666677888999
Q ss_pred eeeeecccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccc-ccccceEEEEE
Q 008535 240 VFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQ-NQLQRKVIIVI 318 (562)
Q Consensus 240 ~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~l~~l~~i~~ 318 (562)
++++..|++|.+++...+.....++..+.+..+++..+++.++++++|++.++|.+++.|........ ..+++++.+++
T Consensus 238 ~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~ 317 (567)
T PLN02479 238 VYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMT 317 (567)
T ss_pred EEEEecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEE
Confidence 99999999999998766665556666666778899999999999999999999999999987654332 25788999999
Q ss_pred eCCCChHHHHHHHHhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCccccc
Q 008535 319 AGVLPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVP 398 (562)
Q Consensus 319 ~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 398 (562)
+|+++++++.+.|++.+.++++.||+||+++.++.+.........+ ...........|.+.++...+++++.+++.+++
T Consensus 318 ~G~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~ 396 (567)
T PLN02479 318 AGAAPPPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLP-PEEQARLNARQGVRYIGLEGLDVVDTKTMKPVP 396 (567)
T ss_pred cCCCCCHHHHHHHHhcCCceecccccccccccccceeccccccccC-cccccccccccCCCcCCcCceeEEcCCCCcccC
Confidence 9999999999999877899999999999976544332211111000 000011112345555555457788766777777
Q ss_pred CCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCC
Q 008535 399 HDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNP 478 (562)
Q Consensus 399 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 478 (562)
.++++.|||+++|++++.||+++++.+...|.+|||+|||+|++|++|.+++.||.+|+|+.+|.+|+|.+||.+|.++|
T Consensus 397 ~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~ 476 (567)
T PLN02479 397 ADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHP 476 (567)
T ss_pred CCCCCceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCc
Confidence 66556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEeeeCCCCCceeEEEEEeCCCCC-----CCHHHHHHHHhccCCCCCCCcEEEeecccCCCCCcchHHHHhhhh
Q 008535 479 KVLEAAVVGKVDDQLKEVPVAFVKLKEGRE-----ASPEELVTFCGDELPSCMVPRAIFFEDIPVNSTGKVQKFVLRGKV 553 (562)
Q Consensus 479 ~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t~~GKv~r~~l~~~~ 553 (562)
.|.+++|++.+++..++.+++++++.++.. ...+++.++++++++.|+.|+.+.+.+||+|++||++|+.|++.+
T Consensus 477 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gKv~r~~L~~~~ 556 (567)
T PLN02479 477 AVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVFGPLPKTATGKIQKHVLRAKA 556 (567)
T ss_pred ccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEeccCCCCCccCeeHHHHHHHH
Confidence 999999999988888889999998876532 235789999999999999999998888999999999999999886
Q ss_pred hh
Q 008535 554 NA 555 (562)
Q Consensus 554 ~~ 555 (562)
..
T Consensus 557 ~~ 558 (567)
T PLN02479 557 KE 558 (567)
T ss_pred Hh
Confidence 65
No 15
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-68 Score=557.55 Aligned_cols=533 Identities=50% Similarity=0.848 Sum_probs=433.3
Q ss_pred ccccCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 12 SASANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 12 ~~~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
+++.+..++++.++|++.++.+|+++|+.+.+..+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~ 89 (545)
T PRK08162 10 RNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVP 89 (545)
T ss_pred ccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 34555667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCC
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFP 171 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
++|++++|+++..+.+++..+++.++++.++++.+..+.+......... ...+.++..... ......
T Consensus 90 ~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------~~~~~~ 156 (545)
T PRK08162 90 MAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPG-------PKPLVIDVDDPE------YPGGRF 156 (545)
T ss_pred HhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCC-------CceEEEecCccc------cccCCC
Confidence 9999999999999999999999999999999999887766554432221 111112111100 000111
Q ss_pred CCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccch
Q 008535 172 SGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCN 251 (562)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 251 (562)
.+..++..+............+.+.+++++++|||||||.||||+++|+++...+......+.+..++++++.+|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 236 (545)
T PRK08162 157 IGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCN 236 (545)
T ss_pred cccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhh
Confidence 12334555544332222222234456899999999999999999999999877777666677888889999999999999
Q ss_pred hhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHH
Q 008535 252 GWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 252 gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~ 331 (562)
++...+...+.+++.++...+++..+++.++++++|++.++|.+++.|++........+.+.+.++++|+.++++..+.+
T Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (545)
T PRK08162 237 GWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKM 316 (545)
T ss_pred hHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHH
Confidence 98877666778888888888999999999999999999999999999988755444455567778899999999999998
Q ss_pred HhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 332 ANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 332 ~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
++++.++++.||+||+++.+..+.......... ...........|.+.+....+++++.+.+.+++.++++.|||+++|
T Consensus 317 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g 395 (545)
T PRK08162 317 EEIGFDLTHVYGLTETYGPATVCAWQPEWDALP-LDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRG 395 (545)
T ss_pred HHhCCceeecccccccCcceeecccccccccCC-ccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEec
Confidence 878999999999999976665543222111111 0011111233454444443567777667777776555679999999
Q ss_pred hhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCC
Q 008535 412 NTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDD 491 (562)
Q Consensus 412 ~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 491 (562)
+.++.||+++++.+...|.+|||+|||+|++|++|.+++.||.+|+|+++|.+++|.+||..|.++|+|.+++|++.+++
T Consensus 396 ~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~ 475 (545)
T PRK08162 396 NIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDP 475 (545)
T ss_pred CcchhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeecccCCCCCcchHHHHhhhhhhhcc
Q 008535 492 QLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFEDIPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 492 ~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
..++.+++++++.++...+.+++++++++.++.+++|..+.+.+||+|++||++|+.|++.+.+.+.
T Consensus 476 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gK~~r~~l~~~~~~l~~ 542 (545)
T PRK08162 476 KWGEVPCAFVELKDGASATEEEIIAHCREHLAGFKVPKAVVFGELPKTSTGKIQKFVLREQAKSLKA 542 (545)
T ss_pred ccCceEEEEEEeCCCCCCCHHHHHHHHHHhcccccCCcEEEecccCCCCCcCCcHHHHHHHHhhhhh
Confidence 8888999999988776677889999999999999999999888899999999999999999877653
No 16
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.9e-69 Score=575.85 Aligned_cols=515 Identities=22% Similarity=0.254 Sum_probs=401.7
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEE----CC-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIY----GT-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLH 87 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~----~~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 87 (562)
....|+.++|+++++.+|+++|+.. .+ +.+||+||.+++.++|++|.+.|+++||+|+++++|+++|++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3446899999999999999999842 11 45999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccccc
Q 008535 88 FAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVA 167 (562)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
+||+++|++++|+++.++.+++.++++.++++++|++.+..+.+......++. ...++.++......+. ..
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~------l~~ii~~~~~~~~~~~---~~ 191 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPS------VRLIVVVGGADEPLPS---LP 191 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCC------ceEEEEECCCchhhhh---hh
Confidence 99999999999999999999999999999999999997766555444332211 2334433221100000 00
Q ss_pred CCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccc
Q 008535 168 NNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDM 247 (562)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl 247 (562)
........++.++.+..........+..++|+++|+|||||||.||||++||+++..+.......+++.+.|++++.+|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl 271 (651)
T PLN02736 192 SGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPL 271 (651)
T ss_pred ccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCH
Confidence 00001124455555433222111223467899999999999999999999999999988888888889999999999999
Q ss_pred ccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc---------------------
Q 008535 248 FRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD--------------------- 306 (562)
Q Consensus 248 ~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--------------------- 306 (562)
+|.+++...+.++..|+++++.+ .++..+++.++++++|+++++|.+++.|.+.....
T Consensus 272 ~h~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (651)
T PLN02736 272 AHIYERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQ 350 (651)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99999988888888898887765 48889999999999999999999998886532100
Q ss_pred --------------------cccc-cceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCc
Q 008535 307 --------------------QNQL-QRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSA 364 (562)
Q Consensus 307 --------------------~~~l-~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~ 364 (562)
...+ +++|.+++||+++++++.+.++ .+++++++.||+||+++.++....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~-------- 422 (651)
T PLN02736 351 ALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDE-------- 422 (651)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCC--------
Confidence 0011 4799999999999999999998 568999999999999765543321
Q ss_pred CCccccccccccCccccccccceecccCCcccccC-CCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEE
Q 008535 365 LDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPH-DGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVR 442 (562)
Q Consensus 365 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~-~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~ 442 (562)
.......+|.|.++. .++|++.+++..... ...+.|||+|+||+++.|||++++.+.+.|. +|||+|||+|++
T Consensus 423 ----~~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~ 497 (651)
T PLN02736 423 ----GDNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLW 497 (651)
T ss_pred ----CCCCCCccCCccCce-EEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEE
Confidence 011234678888777 788887433221111 1113599999999999999999999999984 899999999999
Q ss_pred cCCCcEEEeccccceeec-CCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC--------CCCHHH
Q 008535 443 NPDGYVQMKDRRKDIIIS-GAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR--------EASPEE 513 (562)
Q Consensus 443 ~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~--------~~~~~~ 513 (562)
|+||.++|.||.+|+||+ +|++|+|.+||++|.++|.|.+|+|++. ..++.++++|++++.. ..+..+
T Consensus 498 d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~ 574 (651)
T PLN02736 498 LPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYED 574 (651)
T ss_pred cCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccC
Confidence 999999999999999995 7999999999999999999999999983 3467899999986531 122223
Q ss_pred HHHHHh------------------ccCCCCCCCcEEEeec-cc------CCCCCcchHHHHhhhhhhhc
Q 008535 514 LVTFCG------------------DELPSCMVPRAIFFED-IP------VNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 514 l~~~~~------------------~~l~~~~~p~~i~~~~-lP------~t~~GKv~r~~l~~~~~~~~ 557 (562)
+.++++ ..|+.|++|+.+.+.+ .| +|++||++|+.+++.|.++-
T Consensus 575 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i 643 (651)
T PLN02736 575 LKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAI 643 (651)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHH
Confidence 333332 2599999999998766 43 89999999999999987653
No 17
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-68 Score=553.55 Aligned_cols=490 Identities=26% Similarity=0.403 Sum_probs=417.7
Q ss_pred ChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 21 TPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
.+.+.|++.++.+|+++|+.++++.+||+||+++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57899999999999999999999999999999999999999985 79999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++..+.+++..+++.+++++++++....+.+........ ...++.+.+ +.+
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---------------------~~~ 134 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY-------VQRVISITS---------------------LKE 134 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC-------cceEEEecc---------------------hHh
Confidence 9999999999999999999999999876655544322111 112222211 111
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-HHH
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-TWA 258 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~~~ 258 (562)
....... ...+..++++++++|||||||.||+|.++|.++..+.......+++..+|++++.+|++|.+|+.. .+.
T Consensus 135 ~~~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 211 (496)
T PRK06839 135 IEDRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFP 211 (496)
T ss_pred hhccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHH
Confidence 1111111 111244578999999999999999999999999887777777788899999999999999999865 456
Q ss_pred hHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCee
Q 008535 259 MAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNI 338 (562)
Q Consensus 259 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l 338 (562)
++..|+++++.+.+++..+++.++++++|++.++|.+++.|+........+++++|.+++||++++++..+.+++.++++
T Consensus 212 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~ 291 (496)
T PRK06839 212 TLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLF 291 (496)
T ss_pred HHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCee
Confidence 77788888888889999999999999999999999999999988766667789999999999999999999998779999
Q ss_pred eccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhh
Q 008535 339 RHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGY 418 (562)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 418 (562)
.+.||+||++..++..... ........+|.|.++. .++|++. .+..++.| +.|||+|+|+.++.||
T Consensus 292 ~~~YG~tE~~~~~~~~~~~----------~~~~~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy 357 (496)
T PRK06839 292 GQGFGMTETSPTVFMLSEE----------DARRKVGSIGKPVLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEY 357 (496)
T ss_pred EeeccCCCCCcceEecccc----------cccccCCCCcccCCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhh
Confidence 9999999998654432111 0111234567777776 7888886 44556655 6799999999999999
Q ss_pred cCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeE
Q 008535 419 FKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPV 498 (562)
Q Consensus 419 ~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v 498 (562)
+++++.+...+.+|||+|||++++|++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..++.++
T Consensus 358 ~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 437 (496)
T PRK06839 358 WNRPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437 (496)
T ss_pred cCChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEE
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred EEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhh
Q 008535 499 AFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 499 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~ 555 (562)
++|++.++...+.+++++++++.++.+++|..+.++ ++|+|.+||++|++|+++.++
T Consensus 438 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 438 AFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 999998877778899999999999999999998865 499999999999999987764
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=7.6e-68 Score=555.91 Aligned_cols=507 Identities=25% Similarity=0.349 Sum_probs=420.7
Q ss_pred cccCCCCCChHHHHHHHHHHcCCceEEEECC------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Q 008535 13 ASANNVPLTPIDFLERAAHVYGDATSIIYGT------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKL 86 (562)
Q Consensus 13 ~~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~ 86 (562)
..-.++..++.++|++.++.+|+++|+.+.+ +++||.||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 17 ~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~ 96 (547)
T PRK13295 17 AAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVL 96 (547)
T ss_pred cCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHH
Confidence 4556677799999999999999999999865 7899999999999999999999999999999999999999999
Q ss_pred HHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch-----HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCC
Q 008535 87 HFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV-----EVVQNALDILSPNHKCDKAPLLVTIPECDHYQP 161 (562)
Q Consensus 87 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (562)
++||+++|++++|++|.++.+++.++++.++++++++++... +.+........ ....++.++...
T Consensus 97 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---- 166 (547)
T PRK13295 97 YLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP------ALRHVVVVGGDG---- 166 (547)
T ss_pred HHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC------CcceEEEecCCC----
Confidence 999999999999999999999999999999999999987642 11222111111 012222222111
Q ss_pred CcccccCCCCCCCCchhhhhhcc------cCc-cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC
Q 008535 162 STCSVANNFPSGSLDYNDLLEMG------KAD-FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD 234 (562)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~ 234 (562)
..++.++.... ... ........++++++++|||||||.||+|.++|+++..+.......++
T Consensus 167 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 234 (547)
T PRK13295 167 ------------ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLG 234 (547)
T ss_pred ------------ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhC
Confidence 11222222111 000 00111235689999999999999999999999999988888888888
Q ss_pred CCCCCeeeeecccccchhhH-HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccce
Q 008535 235 VRDMPVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRK 313 (562)
Q Consensus 235 ~~~~~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l 313 (562)
+.+++++++..|++|.+++. .++.++..|+++++.+..++..+++.+++++++++.++|.++..|..........++++
T Consensus 235 ~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l 314 (547)
T PRK13295 235 LGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSL 314 (547)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccc
Confidence 99999999999999999875 46777889999998888899999999999999999999999999988766666678899
Q ss_pred EEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccC
Q 008535 314 VIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQN 392 (562)
Q Consensus 314 ~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~ 392 (562)
|.+++||+++++++.+.++ .++.++++.||+||++..++.+.... .......+|.+.++. .++|++.
T Consensus 315 ~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~v~i~d~- 382 (547)
T PRK13295 315 RTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP----------DERASTTDGCPLPGV-EVRVVDA- 382 (547)
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc----------chhccCccccccCCc-EEEEECC-
Confidence 9999999999999999987 56999999999999976554332110 011123567777776 7888886
Q ss_pred CcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHH
Q 008535 393 TMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEA 472 (562)
Q Consensus 393 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 472 (562)
++.+++.| +.|||+|+|+.++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+|+++|.+++|.+||+
T Consensus 383 ~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~ 459 (547)
T PRK13295 383 DGAPLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEA 459 (547)
T ss_pred CCCCCCCC--CCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHH
Confidence 56666665 67999999999999999998887765 6889999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhc-cCCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 473 VLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGD-ELPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 473 ~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
+|.++++|.+++|++.+++..++.+++++++.++.....+++.+++++ .++++++|..+.+++ ||+|++||++|++|+
T Consensus 460 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~ 539 (547)
T PRK13295 460 LLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLR 539 (547)
T ss_pred HHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHH
Confidence 999999999999999999888899999999887766677899999986 799999999988655 999999999999999
Q ss_pred hhhhhh
Q 008535 551 GKVNAT 556 (562)
Q Consensus 551 ~~~~~~ 556 (562)
+++++.
T Consensus 540 ~~~~~~ 545 (547)
T PRK13295 540 EMLRGE 545 (547)
T ss_pred HHHhcC
Confidence 988653
No 19
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-68 Score=564.75 Aligned_cols=509 Identities=24% Similarity=0.307 Sum_probs=407.9
Q ss_pred CCh-HHHHHHHHHHcCCceEEEECC------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 20 LTP-IDFLERAAHVYGDATSIIYGT------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 20 ~ti-~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
.|+ ..+|+++++.+|+++|+++.+ +++||+||++++.++|+.|.+.|+++||+|+++++|+++++++++||++
T Consensus 66 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 66 LNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred eEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 344 467888888899999998643 4799999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch---------HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCc
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV---------EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPST 163 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (562)
+|++++|+++.++.+++.++++.++++++|+++... +.+......... ...++.++.....
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---- 215 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPS------VEKVIVVRRTGGD---- 215 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCC------ccEEEEEcCCCCC----
Confidence 999999999999999999999999999999987542 222222221110 2233333221100
Q ss_pred ccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH-HHhhcCCCCCCeee
Q 008535 164 CSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA-QISRCDVRDMPVFL 242 (562)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l 242 (562)
..........+.++....... .......++++++|+|||||||.||||+++|+++..+... ....+++.++|+++
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~ 291 (637)
T PRK00174 216 ---VDWVEGRDLWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYW 291 (637)
T ss_pred ---cCcCCCCcccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEE
Confidence 000001123344444332211 1122345689999999999999999999999997655433 34456888899999
Q ss_pred eecccccchhhH-HHHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEE
Q 008535 243 WTLDMFRCNGWC-CTWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVI 315 (562)
Q Consensus 243 ~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~ 315 (562)
+..|++|..++. ..+.++..|+++++.+. +++..+++.++++++|++.++|++++.|++.... ...+++++|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~ 371 (637)
T PRK00174 292 CTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRL 371 (637)
T ss_pred EcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeE
Confidence 999999998875 56777888999888642 4799999999999999999999999999886532 2346789999
Q ss_pred EEEeCCCChHHHHHHHH-hcC---CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceeccc
Q 008535 316 IVIAGVLPTIEVLEQVA-NFG---FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQ 391 (562)
Q Consensus 316 i~~~g~~l~~~~~~~~~-~~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~ 391 (562)
++++|++++++..+++. .++ +++++.||+||+++.++..... ........+|.|.++. .++|+|.
T Consensus 372 i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~~vG~p~~g~-~~~i~d~ 440 (637)
T PRK00174 372 LGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPG----------ATPLKPGSATRPLPGI-QPAVVDE 440 (637)
T ss_pred EEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCC----------CCCcCCCcccCCCCCc-eEEEECC
Confidence 99999999999998887 344 7899999999998765432110 0111234678888877 8888885
Q ss_pred CCcccccCCCCceeEEEEcc--hhhhhhhcCCchhhHhhh---ccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 392 NTMKSVPHDGKTLGEVMFRA--NTVMLGYFKNPKATEEAF---RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 392 ~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
++++++.+ +.|||+|+| |+++.|||++++.+...+ .+|||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 441 -~g~~~~~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~ 517 (637)
T PRK00174 441 -EGNPLEGG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLG 517 (637)
T ss_pred -CCCCCCCC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEEC
Confidence 67777665 679999999 689999999998887765 3789999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC---HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCC
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS---PEELVTFCGDELPSCMVPRAIFFED-IPVNSTG 542 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~G 542 (562)
|.+||++|.++|+|.+++|++.+++..++.++++|++.++...+ .++|+++++++++.+++|..+++++ ||+|++|
T Consensus 518 p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~G 597 (637)
T PRK00174 518 TAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSG 597 (637)
T ss_pred HHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCc
Confidence 99999999999999999999999998999999999988765443 5689999999999999999988665 9999999
Q ss_pred cchHHHHhhhhhhh
Q 008535 543 KVQKFVLRGKVNAT 556 (562)
Q Consensus 543 Kv~r~~l~~~~~~~ 556 (562)
|++|+.|++.+++.
T Consensus 598 Ki~R~~L~~~~~~~ 611 (637)
T PRK00174 598 KIMRRILRKIAEGE 611 (637)
T ss_pred chHHHHHHHHHcCC
Confidence 99999999998765
No 20
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.6e-67 Score=551.75 Aligned_cols=506 Identities=26% Similarity=0.342 Sum_probs=421.0
Q ss_pred cccCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 13 ASANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 13 ~~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
...+....++.++|+++++.+|+++|+++.+..+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||++
T Consensus 14 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~ 93 (542)
T PRK06155 14 DPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAW 93 (542)
T ss_pred ccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 44556777999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+|++++|+++.++.+++..+++.+++++++++.+....+........ ....++.++...... .
T Consensus 94 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~---------~-- 156 (542)
T PRK06155 94 LGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDL------PLPAVWLLDAPASVS---------V-- 156 (542)
T ss_pred hCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccccc------CcceEEEecCccccc---------c--
Confidence 99999999999999999999999999999999877665544322110 012233332211000 0
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchh
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 252 (562)
...+..................++++++++|||||||.||+|.++|+++..........+++.+++++++.+|++|..+
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~ 235 (542)
T PRK06155 157 -PAGWSTAPLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNA 235 (542)
T ss_pred -ccccchhhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHH
Confidence 0000000000000001112235689999999999999999999999999888777778889999999999999999999
Q ss_pred hHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH
Q 008535 253 WCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA 332 (562)
Q Consensus 253 l~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~ 332 (562)
+...+.++..|+++++.+.+++..+++.++++++|.+.++|.++..|++.........++++.++.+| ++++..+.++
T Consensus 236 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~ 313 (542)
T PRK06155 236 LNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFR 313 (542)
T ss_pred HHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHH
Confidence 98888999999999998889999999999999999999999999999887765556677899887666 4577777776
Q ss_pred -hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 333 -NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 333 -~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
.++.++++.||+||+++++..... ......+|.+.++. .++|++. .+++++.+ +.|||+++|
T Consensus 314 ~~~~~~v~~~YG~tE~~~~~~~~~~-------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~ 376 (542)
T PRK06155 314 ERFGVDLLDGYGSTETNFVIAVTHG-------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRA 376 (542)
T ss_pred HHcCCCEEeeecccccCccccCCCC-------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEec
Confidence 569999999999999876554210 11224567777766 7888875 57777766 679999999
Q ss_pred h---hhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 412 N---TVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 412 ~---~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
+ .++.||+++++.+...|.+|||+|||+|++++||.+++.||.+|+|+++|.+++|.+||+++.++++|.+++|+++
T Consensus 377 ~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v 456 (542)
T PRK06155 377 DEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPV 456 (542)
T ss_pred CCccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEee
Confidence 8 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 489 VDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
+++..++.+.+++++.++...+..+++++++++++.+++|..+.+.+ ||+|++||++|++|++.+..
T Consensus 457 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 524 (542)
T PRK06155 457 PSELGEDEVMAAVVLRDGTALEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVT 524 (542)
T ss_pred cccccCceEEEEEEECCCCCCCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccC
Confidence 99888888899998887777788999999999999999999988655 99999999999999887643
No 21
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-68 Score=553.55 Aligned_cols=491 Identities=25% Similarity=0.319 Sum_probs=411.1
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
+.++.++|.++++++|+++|+.+.++++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 46899999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|+++.++.+++.++++.++++++|++......+......... ...++.+++.. ....+.
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------------~~~~~~ 180 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQ------ATRIVAWTDED---------------HDLTVE 180 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccc------cceEEEecCCc---------------ccccHH
Confidence 999999999999999999999999998766555443221110 11122211110 012233
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
.+....... . ....+++.++++|||||||.||||.++|.++..........+.+..+++++...|++|.+++...+.
T Consensus 181 ~~~~~~~~~-~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 257 (537)
T PRK13382 181 VLIAAHAGQ-R--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVL 257 (537)
T ss_pred HHhhccCcC-C--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHH
Confidence 333221111 1 1124578999999999999999999999988887777777788889999999999999999988888
Q ss_pred hHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHH-hcC
Q 008535 259 MAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVA-NFG 335 (562)
Q Consensus 259 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~ 335 (562)
++..|+++++...+++..+++.++++++|++.++|.+++.|++.... ...+++++|.+++||++++++..+.|. .++
T Consensus 258 ~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~ 337 (537)
T PRK13382 258 AASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG 337 (537)
T ss_pred HHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC
Confidence 89999999888889999999999999999999999999999876532 223456899999999999999999988 568
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhh
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVM 415 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 415 (562)
.++++.||+||++.+++.+... .......+|.|.++. .++++|. ++++++.| +.|||+++|+.++
T Consensus 338 ~~i~~~YG~TE~~~~~~~~~~~-----------~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~ 402 (537)
T PRK13382 338 DVIYNNYNATEAGMIATATPAD-----------LRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQF 402 (537)
T ss_pred CcEEecccccccCcceecChhH-----------hccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcc
Confidence 8999999999998655533210 011234678888777 8888886 56777665 6799999999999
Q ss_pred hhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCc
Q 008535 416 LGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKE 495 (562)
Q Consensus 416 ~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 495 (562)
.||+ ++.+. .|.+|||+|||+++++++|++++.||.||+||.+|.+|+|.+||..|.++|+|.+++|++.++...++
T Consensus 403 ~gY~--~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~ 479 (537)
T PRK13382 403 DGYT--SGSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQ 479 (537)
T ss_pred cCcc--ccchh-hccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCC
Confidence 9998 44443 45689999999999999999999999999999999999999999999999999999999999988889
Q ss_pred eeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhh
Q 008535 496 VPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRG 551 (562)
Q Consensus 496 ~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~ 551 (562)
.++++|++.++.....++++++++++++.+++|..+.+++ +|+|++||++|++|++
T Consensus 480 ~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 480 RLAAFVVLKPGASATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEEEEECCCCCCCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9999999887766778899999999999999999988655 9999999999999875
No 22
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.5e-68 Score=556.58 Aligned_cols=495 Identities=18% Similarity=0.197 Sum_probs=393.9
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC-eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT-VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
...++.+.|.+.++.+|+++|+.+.+ +++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v 93 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKI 93 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCe
Confidence 44689999999999999999998866 689999999999999999987 38999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|+++.++.+++.++++.+++++++++.+....+......... . ...++.+++.... ..
T Consensus 94 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~----~~~~i~~~~~~~~---------------~~ 153 (539)
T PRK06334 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE-Y----PFSLIYMEEVRKE---------------LS 153 (539)
T ss_pred eEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc-c----cccEEEEehhhhh---------------cc
Confidence 99999999999999999999999999987765554432211000 0 1122222111000 00
Q ss_pred hhhhhh-----cccCc----cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccc
Q 008535 177 YNDLLE-----MGKAD----FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDM 247 (562)
Q Consensus 177 ~~~~~~-----~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl 247 (562)
+.+... ..+.. ........++++++++|||||||.||||.+||+++..+.......+++..+|++++.+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecch
Confidence 000000 00000 000122456899999999999999999999999998887777778888999999999999
Q ss_pred ccchhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChH
Q 008535 248 FRCNGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTI 325 (562)
Q Consensus 248 ~~~~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~ 325 (562)
+|.+++.. .+.++..|+++++.. .+++..+++.|+++++|++.++|.+++.|++........++++|.+++||+++++
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~ 313 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKD 313 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCH
Confidence 99999864 567778888888765 5799999999999999999999999999988765555678899999999999999
Q ss_pred HHHHHHHh-c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCc
Q 008535 326 EVLEQVAN-F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKT 403 (562)
Q Consensus 326 ~~~~~~~~-~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 403 (562)
+..+.+++ + +..+++.||+||++.+++..... .......+|.|.++. .++|++.+++.+++.| +
T Consensus 314 ~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-----------~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~ 379 (539)
T PRK06334 314 SLYQEALKTFPHIQLRQGYGTTECSPVITINTVN-----------SPKHESCVGMPIRGM-DVLIVSEETKVPVSSG--E 379 (539)
T ss_pred HHHHHHHHHCCCCeEEecccccccCceEEeccCC-----------CCCCCCcCceecCCC-EEEEEcCCCCccCCCC--c
Confidence 99999984 4 68899999999998665543211 011123567777777 7888877667777766 7
Q ss_pred eeEEEEcchhhhhhhcCCchhhHhhh--ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCce
Q 008535 404 LGEVMFRANTVMLGYFKNPKATEEAF--RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVL 481 (562)
Q Consensus 404 ~Gel~v~~~~~~~gy~~~~~~~~~~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 481 (562)
.|||+|+|++++.||+++++.+.... .+|||+|||+|++|++|.+++.||.+|+||++|.+|+|.+||++|.+||+|.
T Consensus 380 ~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~ 459 (539)
T PRK06334 380 TGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQN 459 (539)
T ss_pred eEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCc
Confidence 79999999999999999987644322 3679999999999999999999999999999999999999999999999999
Q ss_pred e------EEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEeec-ccCCCCCcchHHHHhhhh
Q 008535 482 E------AAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKV 553 (562)
Q Consensus 482 ~------~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~ 553 (562)
+ ++|++.+++. ..++++++.. .+.++++++++++ ++.|+.|+.+.+++ ||+|++||++|+.|+++.
T Consensus 460 ~~~~~~~~~v~~~~~~~--~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 460 AADHAGPLVVCGLPGEK--VRLCLFTTFP----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALA 533 (539)
T ss_pred cccccCceEEEcCCCCc--eEEEEEEecc----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHH
Confidence 8 7777766432 3444554422 3567899999886 78999999887655 999999999999999885
Q ss_pred hh
Q 008535 554 NA 555 (562)
Q Consensus 554 ~~ 555 (562)
..
T Consensus 534 ~~ 535 (539)
T PRK06334 534 KS 535 (539)
T ss_pred HH
Confidence 54
No 23
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.3e-68 Score=568.79 Aligned_cols=512 Identities=19% Similarity=0.230 Sum_probs=387.9
Q ss_pred CChHHHHHHHHHHcCCceEEEEC----C-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 20 LTPIDFLERAAHVYGDATSIIYG----T-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
.|+.++|+++++.+|+++|+.+. + ..+||+||.++++++|++|.+.|+++||+|+++++|+++|+++++||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 38999999999999999999741 1 24899999999999999999999999999999999999999999999
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
+++|++++|+++.++.+++.+++++++++++|++.+....+......... ....++.++...... .......
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~-----~l~~vi~~~~~~~~~---~~~~~~~ 196 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTE-----YMKTVVSFGGVSREQ---KEEAETF 196 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccc-----cceEEEEeCCCChHH---hhhhhhc
Confidence 99999999999999999999999999999999987654333221111000 022333332211000 0000000
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc-----CCCCCCeeeeec
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC-----DVRDMPVFLWTL 245 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~l~~~ 245 (562)
.....++.++...............++|+++|+|||||||.||||++||+++..........+ .+..+|++++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~l 276 (666)
T PLN02614 197 GLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYL 276 (666)
T ss_pred CcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEec
Confidence 001234555544322111111223578999999999999999999999999988766554443 567899999999
Q ss_pred ccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc-------------------
Q 008535 246 DMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD------------------- 306 (562)
Q Consensus 246 pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~------------------- 306 (562)
|++|.+++...+.++..|+++++.+ .++..+++.+++++||+++++|.+++.|.......
T Consensus 277 Pl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~ 355 (666)
T PLN02614 277 PLAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYK 355 (666)
T ss_pred cHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999876666677888887764 68999999999999999999999999886421100
Q ss_pred -------------------------cccc-cceEEEEEeCCCChHHHHHHHHhc-CCeeeccccCccccCcccccccCCC
Q 008535 307 -------------------------QNQL-QRKVIIVIAGVLPTIEVLEQVANF-GFNIRHAYGMTEVLGPAIVRQWKPE 359 (562)
Q Consensus 307 -------------------------~~~l-~~l~~i~~~g~~l~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~ 359 (562)
...+ +++|.+++||++++++..+.++.+ ++++++.||+||+++.++.....
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-- 433 (666)
T PLN02614 356 FGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD-- 433 (666)
T ss_pred HHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc--
Confidence 0011 689999999999998765544556 48999999999987644332110
Q ss_pred CCCCcCCccccccccccCccccccccceecccCC--cccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeC
Q 008535 360 GESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT--MKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTG 437 (562)
Q Consensus 360 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~--~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 437 (562)
.......+|.|.++. .++|++.++ +.+++.+ +.|||+|+||+++.|||++|+.|.+.|.+|||+||
T Consensus 434 ---------~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TG 501 (666)
T PLN02614 434 ---------ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTG 501 (666)
T ss_pred ---------cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccCCcccc
Confidence 001234678888877 788877433 2445544 77999999999999999999999999999999999
Q ss_pred ceeEEcCCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC---------
Q 008535 438 DLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR--------- 507 (562)
Q Consensus 438 D~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~--------- 507 (562)
|+|++|+||+++|+||.||+|| .+|++|+|.+||++|.+||.|.+++|++.... ..++++|+++...
T Consensus 502 Dlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~ 578 (666)
T PLN02614 502 DVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENG 578 (666)
T ss_pred eEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcC
Confidence 9999999999999999999999 57999999999999999999999999987532 2488888876421
Q ss_pred -CCC----------HHHHHHHH-----hccCCCCCCCcEEEeeccc-------CCCCCcchHHHHhhhhhhhc
Q 008535 508 -EAS----------PEELVTFC-----GDELPSCMVPRAIFFEDIP-------VNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 508 -~~~----------~~~l~~~~-----~~~l~~~~~p~~i~~~~lP-------~t~~GKv~r~~l~~~~~~~~ 557 (562)
..+ .+.+.+.+ ++.|+.+.+++.+.+.+-| +|+++|++|..+.+.|.+.-
T Consensus 579 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i 651 (666)
T PLN02614 579 VSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVI 651 (666)
T ss_pred CCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHH
Confidence 001 11222222 3569999999999887633 89999999999999988764
No 24
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-67 Score=554.54 Aligned_cols=519 Identities=24% Similarity=0.313 Sum_probs=427.5
Q ss_pred ccCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 14 SANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQL-KISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 14 ~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
+...++.|+.++|.+.++.+|+++|+.+.++++||+||.+++.++|..|.+. |+++||+|+++++|+++++++++||++
T Consensus 4 ~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 4 SLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 4456788999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCC-------CCCCCccc
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECD-------HYQPSTCS 165 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 165 (562)
+|++++|+++..+.+++.++++.+++++++++......+......+. ...++...... ...+....
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLR-------LRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccC-------cceEEEecchhhcccccccCcccccc
Confidence 99999999999999999999999999999999887766554332211 11111111000 00000000
Q ss_pred ----ccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCee
Q 008535 166 ----VANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVF 241 (562)
Q Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 241 (562)
.......+...+++....... ....+..++++++++|||||||.||+|.++|+++..+.......+++...|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 234 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVV 234 (546)
T ss_pred cccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceE
Confidence 000011233445554433211 11223467899999999999999999999999999988888888889999999
Q ss_pred eeecccccchhhH-HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeC
Q 008535 242 LWTLDMFRCNGWC-CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAG 320 (562)
Q Consensus 242 l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g 320 (562)
++.+|++|.+|+. .++.++..|+++++.+.+++..+++.++++++|++.++|.+++.++.........++++|.+++||
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG 314 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGG 314 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecc
Confidence 9999999999975 466778899999999889999999999999999999999999999876555556678999999999
Q ss_pred CCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccC
Q 008535 321 VLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPH 399 (562)
Q Consensus 321 ~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 399 (562)
++++++..+++. .++.++++.||+||++......... ......+|.+.++. .+++++.+++..++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~------------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~ 381 (546)
T PRK08314 315 AAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD------------RPKLQCLGIPTFGV-DARVIDPETLEELPP 381 (546)
T ss_pred ccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc------------CCCCCccCcccCCe-EEEEEeCCCCcCCCC
Confidence 999999999988 5699999999999997655432110 11224567777776 788888777787776
Q ss_pred CCCceeEEEEcchhhhhhhcCCchhhHhhhc----cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHh
Q 008535 400 DGKTLGEVMFRANTVMLGYFKNPKATEEAFR----NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLL 475 (562)
Q Consensus 400 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 475 (562)
+ +.|||+|+|+.++.||++++..+.+.|. ++||+|||+|+++++|.+++.||.||+|+++|.+|+|.+||+++.
T Consensus 382 g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~ 459 (546)
T PRK08314 382 G--EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY 459 (546)
T ss_pred C--CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH
Confidence 6 6799999999999999999998888773 359999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC--CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhh
Q 008535 476 SNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE--ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 476 ~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~ 552 (562)
++++|.+++|++.++...++.+++++++.++.. .+.++++++++++++++++|+.+++++ ||+|++||++|+.|++.
T Consensus 460 ~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 460 KHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred hCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHH
Confidence 999999999999999888899999999876532 356899999999999999999988655 99999999999999876
Q ss_pred hhhh
Q 008535 553 VNAT 556 (562)
Q Consensus 553 ~~~~ 556 (562)
..+.
T Consensus 540 ~~~~ 543 (546)
T PRK08314 540 EKAR 543 (546)
T ss_pred Hhhh
Confidence 5543
No 25
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-67 Score=560.24 Aligned_cols=517 Identities=18% Similarity=0.224 Sum_probs=406.9
Q ss_pred CCCh-HHHHHHHHHHcCCceEEEEC------CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 19 PLTP-IDFLERAAHVYGDATSIIYG------TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 19 ~~ti-~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
..|+ .++|+++++.+|+++|+++. .+++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 51 ~~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 130 (629)
T PRK10524 51 RTNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACA 130 (629)
T ss_pred EeeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3454 57788888889999999862 3689999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccc---------hHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQF---------VEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS 162 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
++|++++|+++.++.+++..++++++++++|+++.. .+.+..+....... ...++.++.....
T Consensus 131 ~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vi~~~~~~~~--- 202 (629)
T PRK10524 131 RIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHK-----PRHVLLVDRGLAP--- 202 (629)
T ss_pred HhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCC-----CCEEEEEeCCCCC---
Confidence 999999999999999999999999999999997642 23333333222111 2233333321100
Q ss_pred cccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHH-HHHhhcCCCCCCee
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSL-AQISRCDVRDMPVF 241 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~ 241 (562)
..........+.++...............++++++++|||||||.||||+++|.++..... .....+++.++|++
T Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 203 ----MARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred ----cCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 0000111234444443322111111223567999999999999999999999998754443 33445688899999
Q ss_pred eeecccccchhhH-HHHHhHhhceEEEEec----cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceE
Q 008535 242 LWTLDMFRCNGWC-CTWAMAAVGGINVCIR----TVSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKV 314 (562)
Q Consensus 242 l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~ 314 (562)
++..|+.|..+.. .++.++..|+++++.+ ..++..+++.++++++|+++++|++++.|.+... ....+++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr 358 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLR 358 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhhee
Confidence 9999999988864 4677788888888765 3578999999999999999999999999877542 2334678999
Q ss_pred EEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC
Q 008535 315 IIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT 393 (562)
Q Consensus 315 ~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 393 (562)
.+++||+++++++.+++. .++.++++.||+||++..+....... .........+|.|.+++ .++|++.++
T Consensus 359 ~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~--------~~~~~~~~~~G~p~~g~-~~~i~d~~~ 429 (629)
T PRK10524 359 ALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV--------EDRPTRLGSPGVPMYGY-NVKLLNEVT 429 (629)
T ss_pred EEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc--------ccCcCCCCCcccCcCCc-eEEEEeCCC
Confidence 999999999999999987 56899999999999975433221100 00111234567777777 788888757
Q ss_pred cccccCCCCceeEEEEcch---hhhhhhcCCchhhHhhh----ccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 394 MKSVPHDGKTLGEVMFRAN---TVMLGYFKNPKATEEAF----RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 394 ~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
+++++.+ +.|||+++|| ..+.+|+++++.+.+.+ .+|||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 430 g~~~~~g--~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~ 507 (629)
T PRK10524 430 GEPCGPN--EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLG 507 (629)
T ss_pred CCCCCCC--CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeC
Confidence 7777765 7799999998 57889999987776554 4689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHhccCCCCCCCcEEEeec-cc
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREA--------SPEELVTFCGDELPSCMVPRAIFFED-IP 537 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~--------~~~~l~~~~~~~l~~~~~p~~i~~~~-lP 537 (562)
|.+||++|.++|+|.+++|++.+++..++.+++++++.++... ..++++++++++++.+++|..+.+++ ||
T Consensus 508 p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP 587 (629)
T PRK10524 508 TREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALP 587 (629)
T ss_pred HHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCC
Confidence 9999999999999999999999999889999999998765432 24689999999999999999988765 99
Q ss_pred CCCCCcchHHHHhhhhhhhcc
Q 008535 538 VNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 538 ~t~~GKv~r~~l~~~~~~~~~ 558 (562)
+|++||++|+.|++++++...
T Consensus 588 ~T~sGKi~R~~L~~~~~~~~~ 608 (629)
T PRK10524 588 KTRSGKLLRRAIQAIAEGRDP 608 (629)
T ss_pred CCCCcchHHHHHHHHHcCCCC
Confidence 999999999999999876543
No 26
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-67 Score=549.37 Aligned_cols=512 Identities=23% Similarity=0.359 Sum_probs=418.9
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
...++|+.++|.+.++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 3 ~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~ 82 (528)
T PRK07470 3 SRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGA 82 (528)
T ss_pred cccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCe
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSL 175 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
+++++++..+.+++.++++.++++.++++....+........... ...++.+.... ...
T Consensus 83 ~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------------~~~ 141 (528)
T PRK07470 83 VWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPD------LTHVVAIGGAR---------------AGL 141 (528)
T ss_pred EEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCc------CceEEEeCCCc---------------ccc
Confidence 999999999999999999999999999998766655443322110 12222222111 012
Q ss_pred chhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc--CCCCCCeeeeecccccchhh
Q 008535 176 DYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC--DVRDMPVFLWTLDMFRCNGW 253 (562)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~gl 253 (562)
++.++...............++++++++|||||||.||+|.++|+++..........+ +....|+++...|++|.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~ 221 (528)
T PRK07470 142 DYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGI 221 (528)
T ss_pred cHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHH
Confidence 3444433321111112234568999999999999999999999999876544433322 46778999999999999998
Q ss_pred HHHHHhHhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHH
Q 008535 254 CCTWAMAAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 254 ~~~~~~~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~ 331 (562)
...+ .+..|++.++.+ .+++..+++.++++++|+++++|.+++.+.+........++++|.+++||++++++..+.+
T Consensus 222 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~ 300 (528)
T PRK07470 222 HQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRA 300 (528)
T ss_pred HHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHH
Confidence 7554 466777776654 5789999999999999999999999999988776556678899999999999999988887
Q ss_pred H-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEc
Q 008535 332 A-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFR 410 (562)
Q Consensus 332 ~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~ 410 (562)
. .++.++++.||+||+++.+........ .. ..........+|.+.++. .+++.+. ++.+++.+ +.|||+++
T Consensus 301 ~~~~g~~~~~~YG~TE~~~~~~~~~~~~~-~~---~~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~ 372 (528)
T PRK07470 301 LAKLGKVLVQYFGLGEVTGNITVLPPALH-DA---EDGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVI 372 (528)
T ss_pred HHHhCcHHHHhCCCcccCCceeecchhhc-cc---cccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEe
Confidence 6 568899999999999876554321100 00 000112234567777766 7777775 66777665 67999999
Q ss_pred chhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeC
Q 008535 411 ANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVD 490 (562)
Q Consensus 411 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 490 (562)
|+.++.||+++++.+...|.+|||+|||+|+++++|++++.||.||+|+++|.+++|.+||..+..++.|.+++|++.++
T Consensus 373 ~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~ 452 (528)
T PRK07470 373 GPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPD 452 (528)
T ss_pred CCccchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 491 DQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 491 ~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
+..++.++++++..++...+.+++++++++.++.+++|..+++.+ ||+|++||++|+.|++++.++.
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 520 (528)
T PRK07470 453 PVWGEVGVAVCVARDGAPVDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERG 520 (528)
T ss_pred cccCceeEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcc
Confidence 888888889998877766788999999999999999999887654 9999999999999999988765
No 27
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-67 Score=547.22 Aligned_cols=505 Identities=30% Similarity=0.437 Sum_probs=426.9
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
...++.+.|++.++.+|+++|+.+.+.++||+||++.+.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|+++..+.+++..+++.+++++++++.............+.. ...++.+...... .......+|
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---------~~~~~~~~~ 147 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPA------LEHVVICETEEDD---------PHTEKMKTF 147 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCC------ccEEEEEcCcccc---------cCccccccH
Confidence 9999999999999999999999999998766655443322111 2223222222110 000122445
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-H
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-T 256 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~ 256 (562)
.++....... ....+..++++++++|||||||.||+|.++|.++..........+++..++++++..|++|.+++.. +
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (513)
T PRK07656 148 TDFLAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGV 226 (513)
T ss_pred HHHHhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHH
Confidence 5555433221 1222356789999999999999999999999999888888888889999999999999999999865 6
Q ss_pred HHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcC
Q 008535 257 WAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFG 335 (562)
Q Consensus 257 ~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~ 335 (562)
+.++..|+++++.+..++..+++.++++++|++.++|.+++.|.+........++++|.+++||++++++..+.+. .++
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~ 306 (513)
T PRK07656 227 NAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELG 306 (513)
T ss_pred HHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcC
Confidence 6777888888887788999999999999999999999999999988766666788999999999999999999987 568
Q ss_pred C-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhh
Q 008535 336 F-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV 414 (562)
Q Consensus 336 ~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 414 (562)
. .+++.||+||+++++..+...... ......+|.+.++. .+++++. .+.+++.+ +.|||+++|+.+
T Consensus 307 ~~~~~~~YG~tE~~~~~~~~~~~~~~---------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~ 373 (513)
T PRK07656 307 VDIVLTGYGLSEASGVTTFNRLDDDR---------KTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNV 373 (513)
T ss_pred CCceEeEEccccCCCceeecCccccc---------cccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchh
Confidence 8 899999999998777655422110 01134678887776 7888875 56777665 679999999999
Q ss_pred hhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCC
Q 008535 415 MLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQL 493 (562)
Q Consensus 415 ~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 493 (562)
+.||++++..+...+. +|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.|.++++|.+++|++.+++..
T Consensus 374 ~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 453 (513)
T PRK07656 374 MKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERL 453 (513)
T ss_pred hhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCccc
Confidence 9999999988888887 899999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhh
Q 008535 494 KEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRG 551 (562)
Q Consensus 494 ~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~ 551 (562)
++.++++++.+++...+.+++.++++++++++++|..+.+++ ||+|++||++|++|++
T Consensus 454 g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 454 GEVGKAYVVLKPGAELTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred CceEEEEEEECCCCCCCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 889999999877666788999999999999999999888655 9999999999999975
No 28
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-67 Score=554.64 Aligned_cols=518 Identities=24% Similarity=0.330 Sum_probs=422.6
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
...|+.++++++++.+|+++|+.+.+..+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 30 ~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 109 (573)
T PRK05605 30 GDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVV 109 (573)
T ss_pred CcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC-----------cc--
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS-----------TC-- 164 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-- 164 (562)
+|++|.++.+++.+++++++++++|+++.....+........ ...++.++......+. ..
T Consensus 110 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
T PRK05605 110 VEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTP-------LETIVSVNMIAAMPLLQRLALRLPIPALRKA 182 (573)
T ss_pred eecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccc-------cceeEeeeccccccccccccccccccccccc
Confidence 999999999999999999999999998876655544332111 1122222111000000 00
Q ss_pred -cccCCCCCCCCchhhhhhcccCc---cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC--CCCC
Q 008535 165 -SVANNFPSGSLDYNDLLEMGKAD---FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD--VRDM 238 (562)
Q Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~ 238 (562)
........+..+|.++....... .........+++++++|||||||.||+|.+||+++..........+. ....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~ 262 (573)
T PRK05605 183 RAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGP 262 (573)
T ss_pred ccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCC
Confidence 00000111234455544332111 01112245689999999999999999999999998877654433332 2346
Q ss_pred CeeeeecccccchhhHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEE
Q 008535 239 PVFLWTLDMFRCNGWCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIV 317 (562)
Q Consensus 239 ~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~ 317 (562)
+++++..|++|.+|+.. .+.++..|+++++.+..++..+++.++++++|++.++|.+++.|.+........++++|.++
T Consensus 263 ~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~ 342 (573)
T PRK05605 263 ERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAF 342 (573)
T ss_pred cEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEE
Confidence 89999999999998764 45567788888888888999999999999999999999999999987766667788999999
Q ss_pred EeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC-cc
Q 008535 318 IAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT-MK 395 (562)
Q Consensus 318 ~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~ 395 (562)
+||++++++..+.++ .++.++++.||+||+++++..+.... ......+|.+.++. .++|.+.++ +.
T Consensus 343 ~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-----------~~~~~~~G~~~~~~-~~~i~d~~~~~~ 410 (573)
T PRK05605 343 SGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD-----------DRRPGYVGVPFPDT-EVRIVDPEDPDE 410 (573)
T ss_pred ECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc-----------CCcCCccccCCCCC-EEEEEcCCCCCc
Confidence 999999999999988 45889999999999987665432110 11234677777776 888888755 56
Q ss_pred cccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHh
Q 008535 396 SVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLL 475 (562)
Q Consensus 396 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 475 (562)
+++.+ +.|||+++|+.++.||++++..+...|.+|||+|||+|++|++|.+++.||.||+|+.+|.+|+|.+||+++.
T Consensus 411 ~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~ 488 (573)
T PRK05605 411 TMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR 488 (573)
T ss_pred cCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH
Confidence 66655 6799999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhh
Q 008535 476 SNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 476 ~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~ 554 (562)
.++.|.+++|++.++...++.+++++++.++...+.++++++++++++.+++|..+++. +||+|.+||++|++|++++.
T Consensus 489 ~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~ 568 (573)
T PRK05605 489 EHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELL 568 (573)
T ss_pred hCcccceEEEEeeecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHH
Confidence 99999999999999988889999999988877778899999999999999999988765 59999999999999999986
Q ss_pred hh
Q 008535 555 AT 556 (562)
Q Consensus 555 ~~ 556 (562)
+.
T Consensus 569 ~~ 570 (573)
T PRK05605 569 EK 570 (573)
T ss_pred HH
Confidence 54
No 29
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.4e-67 Score=554.65 Aligned_cols=503 Identities=23% Similarity=0.343 Sum_probs=405.7
Q ss_pred ChHHHHHHHHHHcCCceEEEECC--eeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 21 TPIDFLERAAHVYGDATSIIYGT--VRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
++.+.+... +.+|+++|+++.. .++||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 41 ~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~ 119 (560)
T PLN02574 41 DAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIV 119 (560)
T ss_pred CHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEE
Confidence 443333333 5789999999864 379999999999999999999 999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|++|..+.+++.++++.+++++++++.+..+.+... . .. ++.+.......+ .......+
T Consensus 120 v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~-------~~-~~~~~~~~~~~~--------~~~~~~~~ 179 (560)
T PLN02574 120 TTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----G-------VP-VIGVPENYDFDS--------KRIEFPKF 179 (560)
T ss_pred eCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----C-------Cc-EEecCccccccc--------CccCcccH
Confidence 9999999999999999999999999997755544321 0 11 222211100000 00111234
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh----hcC-CCCCCeeeeecccccchh
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS----RCD-VRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~-~~~~~~~l~~~pl~~~~g 252 (562)
..+........ ......++++++++|||||||.||||.+||+++......... .+. ....++++..+|++|.+|
T Consensus 180 ~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 258 (560)
T PLN02574 180 YELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYG 258 (560)
T ss_pred HHHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHH
Confidence 44333322111 112235679999999999999999999999998877665433 222 235678899999999999
Q ss_pred hHHH-HHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc-ccccccceEEEEEeCCCChHHHHHH
Q 008535 253 WCCT-WAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS-DQNQLQRKVIIVIAGVLPTIEVLEQ 330 (562)
Q Consensus 253 l~~~-~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-~~~~l~~l~~i~~~g~~l~~~~~~~ 330 (562)
+... +.++..|+++++.+.+++..+++.++++++|+++++|.+++.|++.... ....++++|.+++||++++++..+.
T Consensus 259 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~ 338 (560)
T PLN02574 259 LSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQD 338 (560)
T ss_pred HHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHH
Confidence 8754 4555678898888889999999999999999999999999999887543 3456889999999999999999999
Q ss_pred HH-hc-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEE
Q 008535 331 VA-NF-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVM 408 (562)
Q Consensus 331 ~~-~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~ 408 (562)
+. .+ +..+++.||+||++.+++..... ........+|.+.++. .++|++.+++.+++.+ +.|||+
T Consensus 339 ~~~~~~~~~v~~~YG~tE~~~~~~~~~~~----------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~ 405 (560)
T PLN02574 339 FVQTLPHVDFIQGYGMTESTAVGTRGFNT----------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELW 405 (560)
T ss_pred HHHHCCCCcEEecccccccCceeecCCCc----------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEE
Confidence 87 45 68999999999997654321110 0011234677777777 8888887778877766 679999
Q ss_pred EcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEe
Q 008535 409 FRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVG 487 (562)
Q Consensus 409 v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 487 (562)
|+|++++.||+++++.+.+.|. +|||+|||+|++|++|.+++.||.+|+||++|.+|+|.+||++|.+||+|.+++|++
T Consensus 406 v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~ 485 (560)
T PLN02574 406 IQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTA 485 (560)
T ss_pred EECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEc
Confidence 9999999999999999988874 899999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhhcc
Q 008535 488 KVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 488 ~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
.+++..++.++++|+..++...+.+++.+++++++++|+.|+.+.++ +||+|++||++|+.|++.+.+.+.
T Consensus 486 ~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~ 557 (560)
T PLN02574 486 VPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVS 557 (560)
T ss_pred cccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccc
Confidence 99988889999999988776677889999999999999999988755 599999999999999999877653
No 30
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-67 Score=547.56 Aligned_cols=517 Identities=30% Similarity=0.458 Sum_probs=440.7
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
.+.+.++.++|.++++.+|+++|+.+.+..+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 35667999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSL 175 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
+++++++.++.+++..+++.+++++++++.+..+.+......... ...++.+++.... .......
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---------~~~~~~~ 146 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPT------VRTVIVEGDGPAA---------PLAPEVG 146 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCC------ccEEEEecCcccc---------ccccccc
Confidence 999999999999999999999999999999877776655443221 2233333322210 1112234
Q ss_pred chhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH
Q 008535 176 DYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC 255 (562)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~ 255 (562)
.+.++....+.... ......+++++++|||||||.||+|.+||+++..........+++..++++++..|++|.+++..
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 225 (521)
T PRK06187 147 EYEELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL 225 (521)
T ss_pred cHHHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH
Confidence 45555444332222 22345678999999999999999999999999988888888889999999999999999999988
Q ss_pred HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c
Q 008535 256 TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F 334 (562)
Q Consensus 256 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~ 334 (562)
.+.++..|+++++.+..++..+++.++++++|.++++|++++.|..........++++|.++.||++++.+..+.+.+ +
T Consensus 226 ~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~ 305 (521)
T PRK06187 226 PYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF 305 (521)
T ss_pred HHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh
Confidence 777899999999888889999999999999999999999999999988766677899999999999999999999984 4
Q ss_pred CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhh
Q 008535 335 GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV 414 (562)
Q Consensus 335 ~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 414 (562)
++++++.||+||++++............ ........|.+.++. .++|++. ++.+++.+.++.|||+++|+.+
T Consensus 306 ~~~v~~~YG~tE~~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~ 377 (521)
T PRK06187 306 GIDLVQGYGMTETSPVVSVLPPEDQLPG------QWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWL 377 (521)
T ss_pred CcchheeeccCccCcccccCCccccccc------ccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcch
Confidence 9999999999999876655432111000 011334667777776 8888886 5677777445889999999999
Q ss_pred hhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCC
Q 008535 415 MLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLK 494 (562)
Q Consensus 415 ~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 494 (562)
+.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||+.|.++++|.+++|++.+++..+
T Consensus 378 ~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~ 457 (521)
T PRK06187 378 MQGYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWG 457 (521)
T ss_pred hhhhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhh
Q 008535 495 EVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 495 ~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+.+++++++.++...+.++++++++++++.+.+|..+.++ +||+|++||++|..|++.|.+.
T Consensus 458 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 458 ERPVAVVVLKPGATLDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred ceEEEEEEECCCCCCCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 9999999988877778899999999999999999988865 4999999999999999998864
No 31
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-67 Score=551.79 Aligned_cols=505 Identities=19% Similarity=0.232 Sum_probs=395.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC--CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG--TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
+.|+.+.|.++++.+|+++|+.+. +..+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v 92 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAI 92 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeE
Confidence 448999999999999999999853 367999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|+++.++.+++.++++.++++++|++............... ...++.++..... . .
T Consensus 93 ~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--------~------~- 150 (540)
T PRK05857 93 AVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH-------SIPVIAVDIAAVT--------R------E- 150 (540)
T ss_pred EEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc-------ccceeEeeccccc--------c------c-
Confidence 9999999999999999999999999999765322111111000 0111222111000 0 0
Q ss_pred hhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHH----hhcCCCCCCeeeeecccccchh
Q 008535 177 YNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQI----SRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~----~~~~~~~~~~~l~~~pl~~~~g 252 (562)
+....... .........++++++++|||||||.||||.++|+++.++..... ..+.+..+++.+..+|++|.++
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~ 228 (540)
T PRK05857 151 SEHSLDAA--SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGG 228 (540)
T ss_pred cccccccc--ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccch
Confidence 00000000 00011123567999999999999999999999999876544322 1235667789999999999999
Q ss_pred hHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH
Q 008535 253 WCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA 332 (562)
Q Consensus 253 l~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~ 332 (562)
+...+.++..|+++++ ...++..+++.++++++++++++|.+++.|+.........++++|.+++||++++....+.++
T Consensus 229 l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~ 307 (540)
T PRK05857 229 LWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIE 307 (540)
T ss_pred HHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHH
Confidence 9888888889998765 556889999999999999999999999999887765566788999999999999887776666
Q ss_pred hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccC---CCCceeEEEE
Q 008535 333 NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPH---DGKTLGEVMF 409 (562)
Q Consensus 333 ~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~---~~~~~Gel~v 409 (562)
.++.++++.||+||++........... .........+|.+.++. .++|++.+...+.+. ..++.|||+|
T Consensus 308 ~~g~~i~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Gel~v 379 (540)
T PRK05857 308 ATGVRTAQVYGLSETGCTALCLPTDDG-------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGTLWI 379 (540)
T ss_pred HhCCeeecccCCCcCCceeeecccccc-------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcceEEE
Confidence 779999999999998754332211000 00011234677777777 777777643323322 2246799999
Q ss_pred cchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeee
Q 008535 410 RANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKV 489 (562)
Q Consensus 410 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 489 (562)
+|+.++.||+++++.+.+.|.+|||+|||+|++|++|++++.||.+|+||++|.+|+|.+||.+|..+|+|.+++|++.+
T Consensus 380 ~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~ 459 (540)
T PRK05857 380 KSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIP 459 (540)
T ss_pred eCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEeCCCCCC-CH----HHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 490 DDQLKEVPVAFVKLKEGREA-SP----EELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 490 ~~~~~~~~v~~v~~~~~~~~-~~----~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+...++.++++++..+.... .. +.+.+.+++.++++++|+.+.+.+ ||+|++||++|+.|++.+.+.
T Consensus 460 ~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 460 DEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred ccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhc
Confidence 98888888888876543221 12 344456667799999999988665 999999999999999998754
No 32
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.1e-67 Score=543.41 Aligned_cols=480 Identities=27% Similarity=0.405 Sum_probs=406.9
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
+|+.++|+++++.+|+++|+.+.++.+||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++..+.+++..+++.++++.++++............ ..+.+
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~--------------------------------------~~~~~ 123 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS--------------------------------------VKFAE 123 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc--------------------------------------ccHHH
Confidence 9999999999999999999999998765443221100 00111
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
+...............++++++++|||||||.||+|.+||+++..........+++..+|++++.+|++|.+++..++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 203 (483)
T PRK03640 124 LMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRS 203 (483)
T ss_pred HhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHH
Confidence 11111111111112346789999999999999999999999998887777777889999999999999999999888888
Q ss_pred HhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeee
Q 008535 260 AAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIR 339 (562)
Q Consensus 260 ~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~ 339 (562)
+..|+++++.+..++..+++.++++++|++.++|.++..|....... ....++|.+++||+++++..++.+++++++++
T Consensus 204 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~ 282 (483)
T PRK03640 204 VIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVY 282 (483)
T ss_pred HhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHhCCCee
Confidence 99999999998899999999999999999999999999998764333 33468999999999999999999988899999
Q ss_pred ccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhc
Q 008535 340 HAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYF 419 (562)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 419 (562)
+.||+||++..+...... ........+|.|.++. .+++.+. +.+++.+ +.|||+++|+.++.||+
T Consensus 283 ~~YG~tE~~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~ 347 (483)
T PRK03640 283 QSYGMTETASQIVTLSPE----------DALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYL 347 (483)
T ss_pred eeeccCcccccccccCcc----------cccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhc
Confidence 999999987543322110 0111224566666555 5555553 4555554 67999999999999999
Q ss_pred CCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEE
Q 008535 420 KNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVA 499 (562)
Q Consensus 420 ~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~ 499 (562)
++++.+...|.+|||+|||++++++||.+++.||.+|++|.+|.+++|.+||+.+.++++|.++++++.+++..++.+++
T Consensus 348 ~~~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~ 427 (483)
T PRK03640 348 NREDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVA 427 (483)
T ss_pred CCHHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988887888888
Q ss_pred EEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 500 FVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 500 ~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
+++.. ...+.+++++++++.++.+++|..+++++ ||+|++||++|++|++.+.+
T Consensus 428 ~~~~~--~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 428 FVVKS--GEVTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEeC--CCCCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 88754 34678899999999999999999988655 99999999999999998874
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.5e-67 Score=547.91 Aligned_cols=504 Identities=24% Similarity=0.353 Sum_probs=418.4
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC--CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG--TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
..|+.+++.++++.+|+++|+.+. ++++||.||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 458999999999999999999875 478999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|+++.++.+++..+++.+++++++++....+.+....... ...++.++... .+...
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--------~~~~i~~~~~~--------------~~~~~ 159 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDD--------GVTVVTIDDPP--------------EGCLH 159 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcC--------CceEEEeCCCC--------------CCcee
Confidence 999999999999999999999999999987766554432210 11222222111 01122
Q ss_pred hhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh----hcCCCCCCeeeeecccccchh
Q 008535 177 YNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS----RCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g 252 (562)
+.++........ ......++++++++|||||||.||+|.++|+++......... .+.+..+|++++..|++|.++
T Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 160 FSELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHHHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHH
Confidence 333332211111 112245689999999999999999999999998877665433 467889999999999999999
Q ss_pred hHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHH
Q 008535 253 WCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 253 l~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~ 331 (562)
+.. ++.++..|+++++.+.+++..+++.++++++|++.++|.++..|++........++++|.+++||++++++..+.+
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~ 318 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAF 318 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHH
Confidence 865 5566788999999888999999999999999999999999999988765555678899999999999999999999
Q ss_pred Hh-c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEE
Q 008535 332 AN-F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMF 409 (562)
Q Consensus 332 ~~-~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v 409 (562)
++ + +..+++.||+||++.+++.+..... .........+|.+.++. .+++++.+++.+++.+ +.|||++
T Consensus 319 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~-------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v 388 (537)
T PLN02246 319 RAKLPNAVLGQGYGMTEAGPVLAMCLAFAK-------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICI 388 (537)
T ss_pred HHHcCCCeEeccccccccCcccccccccCC-------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEE
Confidence 85 4 6789999999999765543211000 00111234567777776 8888887677777776 6799999
Q ss_pred cchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 410 RANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 410 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
+|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.+.++|+|.+++|++.
T Consensus 389 ~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~ 468 (537)
T PLN02246 389 RGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPM 468 (537)
T ss_pred ECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcc
Confidence 99999999999999998888 48999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhh
Q 008535 489 VDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~ 555 (562)
+++..++.++++++..++...+.++++++++++++.++.|..+.+. +||+|++||++|++|++.+.+
T Consensus 469 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 469 KDEVAGEVPVAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred cCccCCceeEEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 9888888999999988776677889999999999999999887754 599999999999999998754
No 34
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-67 Score=549.69 Aligned_cols=513 Identities=21% Similarity=0.318 Sum_probs=411.8
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
.|+.++|++.++.+|+++|+++.++.+||+||++++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 489999999999999999999988999999999999999999997 6999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCc-------------cc
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPST-------------CS 165 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 165 (562)
|++|.++.+++.+++++++++++|++....+.+........ .+.++....... .+.. ..
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 175 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTG-------VKHVIVTEVADM-LPPLKRLLINAVVKHVKKM 175 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccC-------cceeEEeccccc-ccchhhhhcccchhhcccc
Confidence 99999999999999999999999998776655444322110 111211110000 0000 00
Q ss_pred ccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC--CCC-CCeee
Q 008535 166 VANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD--VRD-MPVFL 242 (562)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~-~~~~l 242 (562)
.......+...+.+.+..............++++++++|||||||.||||.++|+++..........+. +.. .+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 176 VPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred ccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 000000112233333332221111122345689999999999999999999999998776655544432 333 36789
Q ss_pred eecccccchhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeC
Q 008535 243 WTLDMFRCNGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAG 320 (562)
Q Consensus 243 ~~~pl~~~~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g 320 (562)
+.+|++|.+++.. .+..+..|++.++.+ ..++..+++.++++++|.++++|.++..++.........++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 9999999999864 445556677666554 47899999999999999999999999999876544445677999999999
Q ss_pred CCChHHHHHHHHh-cCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccC
Q 008535 321 VLPTIEVLEQVAN-FGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPH 399 (562)
Q Consensus 321 ~~l~~~~~~~~~~-~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 399 (562)
++++++..+.|++ ++.++++.||+||+++++...... ......+|.+.++. .++++++ ++..++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~------------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~ 401 (562)
T PRK05677 336 MALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ------------AIQVGTIGIPVPST-LCKVIDD-DGNELPL 401 (562)
T ss_pred ccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc------------CCCCCccCccCCCC-EEEEECC-CCCCCCC
Confidence 9999999999884 589999999999987665543210 11224577777777 8888886 5677776
Q ss_pred CCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCC
Q 008535 400 DGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNP 478 (562)
Q Consensus 400 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 478 (562)
| +.|||+++|+.++.||+++++.+...|. +|||+|||+|++|++|.+++.||.+|+|+++|.+|+|.+||+.|.+++
T Consensus 402 g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~ 479 (562)
T PRK05677 402 G--EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALP 479 (562)
T ss_pred C--CCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCC
Confidence 6 6799999999999999999999998885 899999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 479 KVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 479 ~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+|.+++|++++++..++.+++++++.++...+.++++++++++++.|++|..+++++ ||+|++||++|++|++.+..+
T Consensus 480 ~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 480 GVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKK 558 (562)
T ss_pred CccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHh
Confidence 999999999999888899999998877766788999999999999999999988665 999999999999999876544
No 35
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-67 Score=561.77 Aligned_cols=513 Identities=20% Similarity=0.270 Sum_probs=389.2
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC-------C--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG-------T--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFA 89 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA 89 (562)
..|+.++|++.++.+|+++|+... + +.+||+||.+++.++|.+|.+.|+++||+|+++++|+++|+++++|
T Consensus 42 ~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 42 IDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 348999999999999999999641 1 4799999999999999999999999999999999999999999999
Q ss_pred hhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCC
Q 008535 90 VPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANN 169 (562)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (562)
|+++|++++|+++.++.+++.+++++++++++|++....+.+.......... ...++.+++..... ......
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~-----l~~ii~~~~~~~~~---~~~~~~ 193 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSN-----LKTIVSFGDVSSEQ---KEEAEE 193 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCC-----CEEEEEECCCChhh---hhhhhc
Confidence 9999999999999999999999999999999999876554443332221110 23344443211000 000000
Q ss_pred CCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC-----CCCCCeeeee
Q 008535 170 FPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD-----VRDMPVFLWT 244 (562)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-----~~~~~~~l~~ 244 (562)
......++.++........ ...+..++|+++|+|||||||.||||++||+++..........+. +.++|++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (660)
T PLN02861 194 LGVSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSY 272 (660)
T ss_pred CCcEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEE
Confidence 0011234555544332111 112345789999999999999999999999999887766555443 4678999999
Q ss_pred cccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--------------------
Q 008535 245 LDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASA-------------------- 304 (562)
Q Consensus 245 ~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-------------------- 304 (562)
+|++|.+++...+.++..|+++++. ..++..+++.|++++||+++++|.++..|.+...
T Consensus 273 lPl~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~ 351 (660)
T PLN02861 273 LPLAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNY 351 (660)
T ss_pred CcHHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 9999999987766778888888776 4689999999999999999999999998864100
Q ss_pred -----------------ccc-------ccc-cceEEEEEeCCCChHHHHHHHHhcCC-eeeccccCccccCcccccccCC
Q 008535 305 -----------------SDQ-------NQL-QRKVIIVIAGVLPTIEVLEQVANFGF-NIRHAYGMTEVLGPAIVRQWKP 358 (562)
Q Consensus 305 -----------------~~~-------~~l-~~l~~i~~~g~~l~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~ 358 (562)
... ..+ +++|.+++||++++++..+.++.++. .+++.||+||+++.++.....
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~- 430 (660)
T PLN02861 352 KLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN- 430 (660)
T ss_pred HHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc-
Confidence 000 012 57999999999999998665556654 799999999997655432110
Q ss_pred CCCCCcCCccccccccccCccccccccceeccc-CCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeC
Q 008535 359 EGESSALDHEHEMTKHREGLNNLLIQGVDVKQQ-NTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTG 437 (562)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 437 (562)
.......+|.|.++. .+++.+. +.+.... ..++.|||+|+||+++.|||++|+.|.+.|.+|||+||
T Consensus 431 ----------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~-~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TG 498 (660)
T PLN02861 431 ----------VFSMVGTVGVPMTTI-EARLESVPEMGYDAL-SDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTG 498 (660)
T ss_pred ----------cCCCCCCccCccCce-EEEEEEccccCcccC-CCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccC
Confidence 011234678887777 7788763 2221111 12246999999999999999999999999999999999
Q ss_pred ceeEEcCCCcEEEeccccceeec-CCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCC--------C-
Q 008535 438 DLAVRNPDGYVQMKDRRKDIIIS-GAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEG--------R- 507 (562)
Q Consensus 438 D~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~--------~- 507 (562)
|+|++|+||+++|.||.||+||. +|++|+|.+||++|.++|.|.+++|++.+ .++.++++|+++.. .
T Consensus 499 Dlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~~~~~~ 575 (660)
T PLN02861 499 DIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDWAANNN 575 (660)
T ss_pred ceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHHHHHcC
Confidence 99999999999999999999995 89999999999999999999999999875 24568899887532 0
Q ss_pred -CCCH----------HHHHHHHhc-----cCCCCCCCcEEEeec--c-----cCCCCCcchHHHHhhhhhhhc
Q 008535 508 -EASP----------EELVTFCGD-----ELPSCMVPRAIFFED--I-----PVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 508 -~~~~----------~~l~~~~~~-----~l~~~~~p~~i~~~~--l-----P~t~~GKv~r~~l~~~~~~~~ 557 (562)
..+. ..+.+.+++ .++.+..++.+.+.+ + .+|+++|++|+.+.+.|.+.-
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I 648 (660)
T PLN02861 576 KTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCI 648 (660)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHH
Confidence 0111 122333332 478888888888744 6 799999999999999988764
No 36
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.8e-67 Score=552.29 Aligned_cols=503 Identities=26% Similarity=0.356 Sum_probs=412.6
Q ss_pred CCChH-HHHHHHHH-HcCCceEEEECC----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 19 PLTPI-DFLERAAH-VYGDATSIIYGT----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 19 ~~ti~-~~l~~~a~-~~p~~~a~~~~~----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
..|+. +++++++. ..|+++|+.+.+ +++||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~ 120 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALK 120 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 34555 67888776 479999998743 6899999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+|++++|+++.++.+++.++++.+++++++++.......... .++ ....++.+++... ...
T Consensus 121 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~-----------~~~ 181 (570)
T PRK04319 121 NGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLP------SLKHVLLVGEDVE-----------EGP 181 (570)
T ss_pred cCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCC------CceEEEEECCCcC-----------CCc
Confidence 999999999999999999999999999999987654332210 110 0222333222110 011
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchh
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 252 (562)
+..++.+.....+... ...+..++++++++|||||||.||||.++|+++..+.......+++.++|++++..|++|.+|
T Consensus 182 ~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g 260 (570)
T PRK04319 182 GTLDFNALMEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTG 260 (570)
T ss_pred CccCHHHHHhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhC
Confidence 2244555443332221 112345679999999999999999999999999988888888889999999999999999888
Q ss_pred hH-HHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceEEEEEeCCCChHHHH
Q 008535 253 WC-CTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 253 l~-~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
+. .++.++..|+++++.. .+++..+++.++++++|+++++|.+++.|++... .....++++|.++++|+++++++.
T Consensus 261 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~ 340 (570)
T PRK04319 261 TSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVV 340 (570)
T ss_pred chHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHH
Confidence 65 4677788899888765 5899999999999999999999999999987643 233467899999999999999999
Q ss_pred HHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 329 EQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 329 ~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
++++ .++.++++.||+||+++.++..... .......+|.|.++. .++|++. ++.+++.| +.|||
T Consensus 341 ~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~-----------~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel 405 (570)
T PRK04319 341 RWGMKVFGLPIHDNWWMTETGGIMIANYPA-----------MDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNL 405 (570)
T ss_pred HHHHHHhCCCeEeceeecccCCEEEecCCC-----------CCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEE
Confidence 9988 4689999999999998765432110 011234677777776 7788775 56666555 78999
Q ss_pred EEcc--hhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 408 MFRA--NTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 408 ~v~~--~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
+++| +.++.||++++..+...|.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.+.++|.|.+++|
T Consensus 406 ~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v 485 (570)
T PRK04319 406 AIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGV 485 (570)
T ss_pred EEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecce
Confidence 9997 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCCC---HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREAS---PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
++.+++..++.+++++++.++.... .++++++++++++.|++|+.+++++ ||+|++||++|++|+++..+.
T Consensus 486 ~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 560 (570)
T PRK04319 486 IGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGL 560 (570)
T ss_pred ecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCC
Confidence 9999998899999999987764433 3689999999999999999988665 999999999999999986543
No 37
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-66 Score=543.39 Aligned_cols=508 Identities=29% Similarity=0.437 Sum_probs=428.1
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..++.++|.+.++.+|+++|+.+.+..+||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v 89 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHV 89 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|+++..+.+++..+++.+++++++++....+.+.......... ...+..... ..........+.
T Consensus 90 ~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----------~~~~~~~~~~~~ 153 (523)
T PRK08316 90 PVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVD-----TLILSLVLG-----------GREAPGGWLDFA 153 (523)
T ss_pred ecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCcc-----ceeeeeccc-----------ccccccchhhHH
Confidence 9999999999999999999999999988777665543322100 000000000 000111223444
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHH-H
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCT-W 257 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~-~ 257 (562)
++....+... ...+...+++++++|||||||.||+|.+||+++..........+++..++++++.+|++|.+++... .
T Consensus 154 ~~~~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~ 232 (523)
T PRK08316 154 DWAEAGSVAE-PDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLG 232 (523)
T ss_pred HHHhcCCCcc-CccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHH
Confidence 4443322221 2223456799999999999999999999999999888888888899999999999999999998654 4
Q ss_pred HhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c-C
Q 008535 258 AMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F-G 335 (562)
Q Consensus 258 ~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~-~ 335 (562)
.++..|+++++.+..++..+++.++++++|++.++|.++..+++........+++++.+++||+.++.+..+.+++ + +
T Consensus 233 ~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~ 312 (523)
T PRK08316 233 PYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPG 312 (523)
T ss_pred HHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCC
Confidence 4567889998888889999999999999999999999999999887666677889999999999999999999985 4 7
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhh
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVM 415 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 415 (562)
.++++.||+||++.++....... .......+|.+.++. .++|.+. ++.+++.+ +.|||+++|+.++
T Consensus 313 ~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~ 378 (523)
T PRK08316 313 LRFYNCYGQTEIAPLATVLGPEE----------HLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLM 378 (523)
T ss_pred CceeeeecccccCccccccCccc----------cccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchh
Confidence 89999999999987665532111 111224567777776 7778775 56777765 7799999999999
Q ss_pred hhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCc
Q 008535 416 LGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKE 495 (562)
Q Consensus 416 ~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 495 (562)
.||+++++.+...|.+|||+|||+|++++||.+++.||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+++..++
T Consensus 379 ~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 458 (523)
T PRK08316 379 LGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIE 458 (523)
T ss_pred hhhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred eeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhhc
Q 008535 496 VPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 496 ~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
.++++++..++.....+++.++++++++.+++|..+.++ ++|+|++||++|++|++.|.+.-
T Consensus 459 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 459 AVTAVVVPKAGATVTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 999999988776677889999999999999999988855 59999999999999999997653
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-67 Score=541.00 Aligned_cols=483 Identities=19% Similarity=0.274 Sum_probs=407.0
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
|++.+.|+++++.+|+++|+.+.+.++||.||.+++.++|++|.+.|. +||+|+++++|+++++++++||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 578999999999999999999999999999999999999999999984 7999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++.++.+++.++++.+++++++++......+... ...++.+++ +..
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~---------------------~~~ 126 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDE------------EGRVIEIDE---------------------WKR 126 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhc------------cceEEEehh---------------------hhh
Confidence 99999999999999999999999997654333210 111111111 000
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
........ ........+++++++|||||||.||+|.++|+++..+.......+++..+|+++...|++|..++...+.+
T Consensus 127 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~ 205 (487)
T PRK07638 127 MIEKYLPT-YAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAIST 205 (487)
T ss_pred hhhhcccc-ccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHH
Confidence 01000000 00111234678999999999999999999999999888888888899999999999999998888888888
Q ss_pred HhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c-CCe
Q 008535 260 AAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F-GFN 337 (562)
Q Consensus 260 ~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~-~~~ 337 (562)
+..|+++++.+.+++..+++.++++++|+++++|++++.|.+... ...+.+.++++|+.++.+..+++.+ + +.+
T Consensus 206 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~ 281 (487)
T PRK07638 206 LYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAK 281 (487)
T ss_pred HccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCe
Confidence 999999999888999999999999999999999999999987632 2345666778888999999998884 4 788
Q ss_pred eeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhh
Q 008535 338 IRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLG 417 (562)
Q Consensus 338 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 417 (562)
+++.||+||++.++..... ........+|.|.++. .++|++. ++.+++.+ +.|||+++|+.++.|
T Consensus 282 ~~~~YG~tE~~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~g 346 (487)
T PRK07638 282 LYEFYGASELSFVTALVDE-----------ESERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMG 346 (487)
T ss_pred EEEEecCCccCceEEeccc-----------ccCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceee
Confidence 9999999999866544321 1112234678887776 8888886 57777665 679999999999999
Q ss_pred hcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCcee
Q 008535 418 YFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVP 497 (562)
Q Consensus 418 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 497 (562)
|++++..+...+.+|||+|||+|++|++|.+++.||.+|+||++|.+|+|.+||+++.++|+|.+++|++.+++..++.+
T Consensus 347 y~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~ 426 (487)
T PRK07638 347 YIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKP 426 (487)
T ss_pred ecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCee
Confidence 99999888877889999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred EEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhhcccc
Q 008535 498 VAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNATAVGW 560 (562)
Q Consensus 498 v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~~~~~ 560 (562)
+++++. ....+++++++++.++++++|..++++ +||+|++||++|++|++++.+.++.+
T Consensus 427 ~~~v~~----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~ 486 (487)
T PRK07638 427 VAIIKG----SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEKIY 486 (487)
T ss_pred EEEEEC----CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccccc
Confidence 888873 357789999999999999999988864 59999999999999999998877643
No 39
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-67 Score=552.78 Aligned_cols=506 Identities=22% Similarity=0.214 Sum_probs=393.6
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCe----------eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTV----------RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLH 87 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 87 (562)
+.+|+.++|++.++.+|+++|+++.+. ++||+||.+++.++|++|.+.|+++||+|+++++|++++++++
T Consensus 4 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~ 83 (552)
T PRK09274 4 SMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALT 83 (552)
T ss_pred hhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHH
Confidence 346889999999999999999998654 7999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc--chHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccc
Q 008535 88 FAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ--FVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCS 165 (562)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (562)
+||+++|++++|++|.++.+++.++++.++++++|++.. ..+.+.. .... ....++.++...
T Consensus 84 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~----~~~~----~~~~~i~~~~~~-------- 147 (552)
T PRK09274 84 FALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFG----WGKP----SVRRLVTVGGRL-------- 147 (552)
T ss_pred HHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhc----cCcc----chhheecccccc--------
Confidence 999999999999999999999999999999999999752 1111111 0000 011122221110
Q ss_pred ccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeec
Q 008535 166 VANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTL 245 (562)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~ 245 (562)
..+...+.++...............++++++++|||||||.||+|.++|+++..........+++.++++.++.+
T Consensus 148 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 222 (552)
T PRK09274 148 -----LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTF 222 (552)
T ss_pred -----ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeecc
Confidence 001123333331111111111224568999999999999999999999999998888888888999999999999
Q ss_pred ccccchhhHHHHHhHhhceEEEEec-------cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEE
Q 008535 246 DMFRCNGWCCTWAMAAVGGINVCIR-------TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVI 318 (562)
Q Consensus 246 pl~~~~gl~~~~~~~~~g~~~v~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~ 318 (562)
|++|.+++ ..|++.++.. .+++..+++.++++++|+++++|++++.|++.......+++++|.+++
T Consensus 223 pl~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~ 295 (552)
T PRK09274 223 PLFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVIS 295 (552)
T ss_pred CHHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEe
Confidence 99876543 3466666543 368899999999999999999999999998876555567899999999
Q ss_pred eCCCChHHHHHHHHh-c--CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccC---
Q 008535 319 AGVLPTIEVLEQVAN-F--GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQN--- 392 (562)
Q Consensus 319 ~g~~l~~~~~~~~~~-~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~--- 392 (562)
||++++++..+.+++ + ++++++.||+||++++++............ .........+|.+.++. .++|++.+
T Consensus 296 gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~--~~~~~~~~~vG~~~~~~-~~~ivd~~~~~ 372 (552)
T PRK09274 296 AGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRA--ATDNGAGICVGRPVDGV-EVRIIAISDAP 372 (552)
T ss_pred cCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccc--cccCCCCcccCccCCCc-eEEEEeccccc
Confidence 999999999999984 4 579999999999987654332110000000 00011123568888776 78887742
Q ss_pred -----CcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh---ccc--eeeeCceeEEcCCCcEEEeccccceeecCC
Q 008535 393 -----TMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF---RNG--WYHTGDLAVRNPDGYVQMKDRRKDIIISGA 462 (562)
Q Consensus 393 -----~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G 462 (562)
++++++.+ +.|||+++|+.++.||+++++.+...| .+| ||+|||+|++|+||++++.||.||+|+++|
T Consensus 373 ~~~~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G 450 (552)
T PRK09274 373 IPEWDDALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAG 450 (552)
T ss_pred cccccccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECC
Confidence 34555554 789999999999999999999888776 256 999999999999999999999999999999
Q ss_pred eEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCC---CCCCcEEEeec-ccC
Q 008535 463 EIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPS---CMVPRAIFFED-IPV 538 (562)
Q Consensus 463 ~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~---~~~p~~i~~~~-lP~ 538 (562)
.+|+|.+||++|.+||+|.+++|++.+++. ++.++++|++.++...+.+++.+.+++.+.. ++.|..+.+++ ||+
T Consensus 451 ~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~ 529 (552)
T PRK09274 451 GTLYTIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPV 529 (552)
T ss_pred EEECcHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCc
Confidence 999999999999999999999999998764 6678899988877655555566666655444 45666776655 999
Q ss_pred C--CCCcchHHHHhhhhhhhc
Q 008535 539 N--STGKVQKFVLRGKVNATA 557 (562)
Q Consensus 539 t--~~GKv~r~~l~~~~~~~~ 557 (562)
| ++||++|++|+++++++.
T Consensus 530 t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 530 DIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred cccccccccHHHHHHHHHHhh
Confidence 9 799999999999987764
No 40
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-66 Score=543.27 Aligned_cols=521 Identities=27% Similarity=0.431 Sum_probs=421.2
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEEC--C--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYG--T--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
.++.++.++|+++++.+|+..++.+. + +++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~ 86 (539)
T PRK07008 7 DMPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSG 86 (539)
T ss_pred cCCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 35668999999999999999988752 2 5799999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+|++++|+++..+.+++..+++.+++++++++....+.+.+....... ...++.+.+.... + .. ..
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~------~~-~~ 152 (539)
T PRK07008 87 SGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPN------VKGWVAMTDAAHL-P------AG-ST 152 (539)
T ss_pred cCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCC------ceEEEEEccCCcc-c------cC-Cc
Confidence 999999999999999999999999999999998776655544332211 2223322221110 0 00 01
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHH--HHHhhcCCCCCCeeeeecccccc
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSL--AQISRCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~--~~~~~~~~~~~~~~l~~~pl~~~ 250 (562)
...++.++......... .....++++++++|||||||.||+|.+||+++..+.. .....+++..+|++++..|++|.
T Consensus 153 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 231 (539)
T PRK07008 153 PLLCYETLVGAQDGDYD-WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHV 231 (539)
T ss_pred ccccHHHHhcccCCCcC-cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHh
Confidence 23455555433222211 1234567899999999999999999999999865433 23346778889999999999998
Q ss_pred hhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHH
Q 008535 251 NGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLE 329 (562)
Q Consensus 251 ~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~ 329 (562)
+++...+.++..|+++++.+ .+++..+++.++++++|++.++|+++..|++........+++++.++++|+++++++.+
T Consensus 232 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~ 311 (539)
T PRK07008 232 NAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIR 311 (539)
T ss_pred hhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHH
Confidence 88877777788899988764 57899999999999999999999999999987766666788999999999999999999
Q ss_pred HHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEE
Q 008535 330 QVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVM 408 (562)
Q Consensus 330 ~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~ 408 (562)
.+. .++.++++.||+||+++.++.+............ ........+|.|.++. .++|++. ++..++.++++.|||+
T Consensus 312 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~ 388 (539)
T PRK07008 312 TFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLD-EQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQ 388 (539)
T ss_pred HHHHHhCCceecccccccccccceecccccccccCCch-hhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEE
Confidence 997 6799999999999998765543321111100000 0001134577788777 8888885 6677776655679999
Q ss_pred EcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 409 FRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 409 v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
++|+.++.||++++. ..+.+|||+|||+|++|+||.+++.||.+|+|+.+|.+++|.+||+.|..+|.|.++++++.
T Consensus 389 v~g~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~ 465 (539)
T PRK07008 389 VRGPWVIDRYFRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIAC 465 (539)
T ss_pred EeCCccchhhcCChh---hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEec
Confidence 999999999999873 34568999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcc
Q 008535 489 VDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
++..+++.++++|+..++...+.+++++++++++++|+.|..+++.+ ||+|++||++|++|+++|++-..
T Consensus 466 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~ 536 (539)
T PRK07008 466 AHPKWDERPLLVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVL 536 (539)
T ss_pred CCchhccceEEEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 99888889999998877766778899999999999999999888654 99999999999999999887654
No 41
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2e-66 Score=552.66 Aligned_cols=509 Identities=19% Similarity=0.223 Sum_probs=392.2
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
...|+...+.+ +.++++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 85 ~~~n~~~~~~~---~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~ 161 (652)
T TIGR01217 85 ARLNYAENLLR---AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATAS 161 (652)
T ss_pred CeeeHHHHHhc---cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 44555555443 357888887732 5799999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccc---------hHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCc
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQF---------VEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPST 163 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (562)
+|++++|+++.++.+++.+++++++++++|+++.. .+.+......++. ...++.++......
T Consensus 162 ~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~--- 232 (652)
T TIGR01217 162 VGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPT------LRAVVHIPYLGPRE--- 232 (652)
T ss_pred hCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCC------ccEEEEEeCCCCcc---
Confidence 99999999999999999999999999999998753 2333333322211 22333332211000
Q ss_pred ccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHH-HHHHHhhcCCCCCCeee
Q 008535 164 CSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLN-SLAQISRCDVRDMPVFL 242 (562)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~l 242 (562)
.... ...+...+.++............+...+++++|+|||||||.||||+++|++++.. .......+++.++|+++
T Consensus 233 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~ 310 (652)
T TIGR01217 233 TEAP--KIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLF 310 (652)
T ss_pred cccc--cccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEE
Confidence 0000 00123456665543211111112345689999999999999999999999986543 34444567889999999
Q ss_pred eecccccchhhHHHHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceEEE
Q 008535 243 WTLDMFRCNGWCCTWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKVII 316 (562)
Q Consensus 243 ~~~pl~~~~gl~~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~~i 316 (562)
+..|+.|..+ ..++.++..|+++++.+. .++..++++++++++|++...|.+++.+..... ....+++++|.+
T Consensus 311 ~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i 389 (652)
T TIGR01217 311 YYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCV 389 (652)
T ss_pred EeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEE
Confidence 9999988753 335578889999998752 378899999999999999888888887765421 234568999999
Q ss_pred EEeCCCChHHHHHHHH-hcC--CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC
Q 008535 317 VIAGVLPTIEVLEQVA-NFG--FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT 393 (562)
Q Consensus 317 ~~~g~~l~~~~~~~~~-~~~--~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 393 (562)
++||++++++..+++. .++ ..+.+.||+||+++...... + ..+.....+|.|.++. .+++++. +
T Consensus 390 ~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~--~---------~~~~~~g~~g~p~~g~-~v~ivd~-~ 456 (652)
T TIGR01217 390 ASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGAN--P---------TLPVHIGEIQAPGLGT-AVQSWDP-E 456 (652)
T ss_pred EeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCC--C---------CCCCcCCccCCCcCCC-ceEEECC-C
Confidence 9999999999999887 444 45778999999754332211 0 0111223456677776 7778776 5
Q ss_pred cccccCCCCceeEEEEcch--hhhhhhcCCchhhH--hh-hc--cceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 394 MKSVPHDGKTLGEVMFRAN--TVMLGYFKNPKATE--EA-FR--NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 394 ~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
+++++ ++.|||+++|| .++.|||++++.+. .. |. +|||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 457 g~~~~---g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~ 533 (652)
T TIGR01217 457 GKPVT---GEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMG 533 (652)
T ss_pred CCCCC---CCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcC
Confidence 66663 37799999996 58899999987553 22 32 689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCH---HHHHHHHhccCCCCCCCcEEEeec-ccCCCCC
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASP---EELVTFCGDELPSCMVPRAIFFED-IPVNSTG 542 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~---~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~G 542 (562)
|.+||++|.+||.|.+++|++++++..++.++++|++.++...+. ++++++++++++++++|+.|.+++ ||+|++|
T Consensus 534 p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sG 613 (652)
T TIGR01217 534 SAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTG 613 (652)
T ss_pred HHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCc
Confidence 999999999999999999999999999999999999987755443 589999999999999999988766 9999999
Q ss_pred cchHHHHhhhhhhhc
Q 008535 543 KVQKFVLRGKVNATA 557 (562)
Q Consensus 543 Kv~r~~l~~~~~~~~ 557 (562)
|++|+.|++++++..
T Consensus 614 Ki~r~~Lr~~~~~~~ 628 (652)
T TIGR01217 614 KRVEVAVKRVLQGTP 628 (652)
T ss_pred cChHHHHHHHHcCCC
Confidence 999999999987654
No 42
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-66 Score=544.46 Aligned_cols=508 Identities=23% Similarity=0.294 Sum_probs=403.7
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
...|+.++|+++++.+|+++|+++.+ ..+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (534)
T PRK05852 14 FGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADL 93 (534)
T ss_pred hcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCc
Confidence 34489999999999999999998744 4799999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSL 175 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
+++++++.++.+++.++++.++++++|++............ .. .+..+.+...... . .... ..
T Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~-~-----~~~~---~~ 156 (534)
T PRK05852 94 VVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RW-----WPLTVNVGGDSGP-S-----GGTL---SV 156 (534)
T ss_pred EEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cc-----cceeeeecccccc-c-----cccc---cc
Confidence 99999999999999999999999999998753321110000 00 0111111110000 0 0000 00
Q ss_pred chhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH
Q 008535 176 DYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC 255 (562)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~ 255 (562)
.+.... .........+...++.++++|||||||.||||.++|+++..........+.+..+|++++..|++|.+++..
T Consensus 157 ~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 234 (534)
T PRK05852 157 HLDAAT--EPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIA 234 (534)
T ss_pred cccccc--CCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHH
Confidence 000000 000000111122468899999999999999999999999988888888889999999999999999999876
Q ss_pred -HHHhHhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc--cccccceEEEEEeCCCChHHHHHH
Q 008535 256 -TWAMAAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD--QNQLQRKVIIVIAGVLPTIEVLEQ 330 (562)
Q Consensus 256 -~~~~~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~l~~l~~i~~~g~~l~~~~~~~ 330 (562)
.+.++..|+++++.. .+++..+++.++++++|.++++|.++..|.+..... ...++++|.++++|+++++++.+.
T Consensus 235 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~ 314 (534)
T PRK05852 235 ALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQA 314 (534)
T ss_pred HHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHH
Confidence 455556666666533 478999999999999999999999999998765332 245789999999999999999999
Q ss_pred HH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCcc--ccccccceecccCCcccccCCCCceeEE
Q 008535 331 VA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLN--NLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 331 ~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
++ .++.++++.||+||++..++........ . ........|.+ .++. .+++++. ++++++.+ +.|||
T Consensus 315 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~--~-----~~~~~~~~g~~g~~~g~-~~~i~d~-~g~~~~~g--~~Gel 383 (534)
T PRK05852 315 LQTEFAAPVVCAFGMTEATHQVTTTQIEGIG--Q-----TENPVVSTGLVGRSTGA-QIRIVGS-DGLPLPAG--AVGEV 383 (534)
T ss_pred HHHHhCCChhhccCccccchhhhcCCccccc--c-----ccCcccccccCCCCCCC-eEEEECC-CCCCCCCC--CceEE
Confidence 88 5799999999999998665543211000 0 00001123333 3444 6677775 56667665 77999
Q ss_pred EEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEe
Q 008535 408 MFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVG 487 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 487 (562)
+|+|+.++.||+++++.+...|.+|||+|||+|++|+||++++.||.+|+|+.+|.+|+|.+||+++.++|+|.+++|++
T Consensus 384 ~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g 463 (534)
T PRK05852 384 WLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFG 463 (534)
T ss_pred EEecCcccchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 488 KVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 488 ~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
.+++..++.++++|+..+....+.+++.++++++++.+++|+.+.+++ ||+|++||++|++|++.|..
T Consensus 464 ~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 464 VPDQLYGEAVAAVIVPRESAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cCCcCcCceEEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 999888899999999877666788999999999999999999988665 99999999999999999854
No 43
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-66 Score=553.18 Aligned_cols=510 Identities=22% Similarity=0.246 Sum_probs=397.9
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
...|+.+.+.++ .+|+++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 84 ~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~ 161 (655)
T PRK03584 84 ARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATAS 161 (655)
T ss_pred CEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 334666555432 579999998753 5899999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch---------HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCc
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV---------EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPST 163 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (562)
+|++++|+++.++.+++.++++.++++++|+++... +.+......+.. ...++.++.....
T Consensus 162 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~---- 231 (655)
T PRK03584 162 LGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPS------LEHVVVVPYLGPA---- 231 (655)
T ss_pred cCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCC------ccEEEEEecCCCc----
Confidence 999999999999999999999999999999987532 222222221110 1223333221100
Q ss_pred ccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHH-HHHHHhhcCCCCCCeee
Q 008535 164 CSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLN-SLAQISRCDVRDMPVFL 242 (562)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~l 242 (562)
.......+...|.++............+...+++++|+|||||||.||||++||++++.+ .......+++.++|+++
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~ 309 (655)
T PRK03584 232 --AAAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFF 309 (655)
T ss_pred --ccccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEE
Confidence 000011123455555542221111222345689999999999999999999999987644 44455667889999999
Q ss_pred eecccccchhhHHHHHhHhhceEEEEec----cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceEEE
Q 008535 243 WTLDMFRCNGWCCTWAMAAVGGINVCIR----TVSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKVII 316 (562)
Q Consensus 243 ~~~pl~~~~gl~~~~~~~~~g~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~~i 316 (562)
+..++.|..+. ..+.+++.|+++++.+ ..++..+++.++++++|++..+|.+++.|.+... ....+++++|.+
T Consensus 310 ~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i 388 (655)
T PRK03584 310 WYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTI 388 (655)
T ss_pred EcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEE
Confidence 99988876543 4567888999998875 2589999999999999999999999999976532 233568899999
Q ss_pred EEeCCCChHHHHHHHH-hc--CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC
Q 008535 317 VIAGVLPTIEVLEQVA-NF--GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT 393 (562)
Q Consensus 317 ~~~g~~l~~~~~~~~~-~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 393 (562)
++||+++++++.+++. .+ +..+.+.||+||+++...... .........+|.|.++. .++|+|. +
T Consensus 389 ~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~-----------~~~~~~~g~~g~p~~g~-~~~ivd~-~ 455 (655)
T PRK03584 389 GSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGN-----------PLLPVYRGEIQCRGLGM-AVEAWDE-D 455 (655)
T ss_pred EEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCC-----------CCCCcCCCccCCCcCCc-eeEEECC-C
Confidence 9999999999999987 44 478999999999864433211 00111234567777776 7888886 5
Q ss_pred cccccCCCCceeEEEEcch--hhhhhhcCCchhhH--hh-h--ccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 394 MKSVPHDGKTLGEVMFRAN--TVMLGYFKNPKATE--EA-F--RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 394 ~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
+.++ .+ +.|||+|+|+ +++.||+++++.+. .. | .+|||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 456 g~~~-~g--~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~ 532 (655)
T PRK03584 456 GRPV-VG--EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIG 532 (655)
T ss_pred CCCC-CC--CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEEC
Confidence 6665 33 6799999996 78999999987543 22 2 2689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCH---HHHHHHHhccCCCCCCCcEEEeec-ccCCCCC
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASP---EELVTFCGDELPSCMVPRAIFFED-IPVNSTG 542 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~---~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~G 542 (562)
|.+||++|.+||.|.+++|++.+++..++.++++|++.++...+. ++++++++++++++++|..+++++ ||+|++|
T Consensus 533 p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sG 612 (655)
T PRK03584 533 TAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSG 612 (655)
T ss_pred HHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCc
Confidence 999999999999999999999999888999999999987654443 689999999999999999988765 9999999
Q ss_pred cchHHHHhhhhhhhcc
Q 008535 543 KVQKFVLRGKVNATAV 558 (562)
Q Consensus 543 Kv~r~~l~~~~~~~~~ 558 (562)
|++|+.|++++.+...
T Consensus 613 Ki~r~~lr~~~~~~~~ 628 (655)
T PRK03584 613 KKVELPVKKLLHGRPV 628 (655)
T ss_pred cchHHHHHHHHcCCCC
Confidence 9999999999876653
No 44
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-66 Score=535.68 Aligned_cols=491 Identities=27% Similarity=0.385 Sum_probs=412.4
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
+++.++++++++.+|+++|+.+.+..+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++..+.+++..+++.+++++++++.+....... ....+.++.... ..+..
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~~----------------~~~~~ 132 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-------------ETPKIVIDAAAQ----------------ADSRR 132 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-------------ccceEEecCccc----------------chhHH
Confidence 9999999999999999999999998765432110 001111111000 00001
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-HHH
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-TWA 258 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~~~ 258 (562)
+.. ............++++++++|||||||.||+|.+||+++..........+++..+++++...|++|.+++.. .+.
T Consensus 133 ~~~-~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 211 (497)
T PRK06145 133 LAQ-GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIA 211 (497)
T ss_pred Hhc-cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHH
Confidence 100 000111112245679999999999999999999999998877766667788999999999999999988864 466
Q ss_pred hHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hc-CC
Q 008535 259 MAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NF-GF 336 (562)
Q Consensus 259 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~-~~ 336 (562)
.++.|+++++.+.+++..+++.++++++|.+.++|++++.++.........++++|.+++||++++.+..+.++ .+ +.
T Consensus 212 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~ 291 (497)
T PRK06145 212 VLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRA 291 (497)
T ss_pred HHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCC
Confidence 77888988888889999999999999999999999999999887665556778999999999999999999987 44 67
Q ss_pred eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh
Q 008535 337 NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML 416 (562)
Q Consensus 337 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 416 (562)
++++.||+||+++.++...... .......+|.+.++. .+++.+. ++..++.+ +.|||+++|+.++.
T Consensus 292 ~v~~~YG~tE~~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~ 357 (497)
T PRK06145 292 RYIDAYGLTETCSGDTLMEAGR----------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTK 357 (497)
T ss_pred ceEEeecCcccCCcceeccCcc----------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhh
Confidence 8999999999987554322110 001123567777776 7888875 56666655 67999999999999
Q ss_pred hhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCce
Q 008535 417 GYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEV 496 (562)
Q Consensus 417 gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 496 (562)
||+++++.+...|.++||+|||+|+++++|.+++.||.+|+||++|.+++|.+||+.|.++++|.+++|++.+++..++.
T Consensus 358 Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 437 (497)
T PRK06145 358 GYWKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGER 437 (497)
T ss_pred hhcCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhh
Q 008535 497 PVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 497 ~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~ 554 (562)
+++++++.+......+++.++++++++++++|..++++ +||+|++||++|++|+++++
T Consensus 438 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 438 ITAVVVLNPGATLTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 99999988766677899999999999999999998865 49999999999999998775
No 45
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.6e-66 Score=539.74 Aligned_cols=506 Identities=27% Similarity=0.382 Sum_probs=422.3
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
..+|+.+.+.+.++.+|+++|+.+.+..+||.||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|+++..+.+++..+++.+++++++++....+.+.......+. ...++.+.+.. ..+..++
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------------~~~~~~~ 155 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPL------LSTVVVAGGSS-------------DDSVLGY 155 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCc------cceEEEecCCC-------------cccccCH
Confidence 9999999999999999999999999998766655443322110 22233322111 1122344
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCC-CCCCeeeeecccccchhhHHH
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDV-RDMPVFLWTLDMFRCNGWCCT 256 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~l~~~pl~~~~gl~~~ 256 (562)
.++........ .......+++++++|||||||.||+|.++|+++..........+++ ...+++++..|++|.+|+..+
T Consensus 156 ~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 234 (542)
T PRK07786 156 EDLLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSM 234 (542)
T ss_pred HHHhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHH
Confidence 55443332221 1123445689999999999999999999999998888777777776 678899999999999999888
Q ss_pred HHhHhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-
Q 008535 257 WAMAAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN- 333 (562)
Q Consensus 257 ~~~~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~- 333 (562)
+.++..|+++++.+ .+++..+++.++++++|.++++|++++.|+......... .++|.+++||++++++.++.+.+
T Consensus 235 ~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~ 313 (542)
T PRK07786 235 LPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAAT 313 (542)
T ss_pred HHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHH
Confidence 88999999998865 579999999999999999999999999998875443333 36899999999999999999884
Q ss_pred c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcch
Q 008535 334 F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRAN 412 (562)
Q Consensus 334 ~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~ 412 (562)
+ +.++++.||+||++++.+..... ........+|.+.++. .++|++. ++..++.+ +.|||+++|+
T Consensus 314 ~~~~~l~~~YG~tE~~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~ 379 (542)
T PRK07786 314 FPEAQILAAFGQTEMSPVTCMLLGE----------DAIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRAP 379 (542)
T ss_pred cCCCeEEeeecccccccceEecCcc----------cccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEECh
Confidence 4 78899999999998765532211 0111224567777776 7888885 56666655 7799999999
Q ss_pred hhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCC
Q 008535 413 TVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQ 492 (562)
Q Consensus 413 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 492 (562)
.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+++|.+||++|.+++.|.+++|++.+...
T Consensus 380 ~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~ 459 (542)
T PRK07786 380 TLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEK 459 (542)
T ss_pred hhhhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred CCceeEEEEEeCCCC-CCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcc
Q 008535 493 LKEVPVAFVKLKEGR-EASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 493 ~~~~~v~~v~~~~~~-~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
.++.+++++++.+.. ....+++.++++++++++++|..+++++ ||+|++||++|++|++.|.+...
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 527 (542)
T PRK07786 460 WGEVPVAVAAVRNDDAALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVN 527 (542)
T ss_pred cCceEEEEEEECCCCCCCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhc
Confidence 788888988877543 3567899999999999999999888655 99999999999999999987764
No 46
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-66 Score=554.12 Aligned_cols=505 Identities=18% Similarity=0.219 Sum_probs=398.7
Q ss_pred CCChHHHHHHHHHHcCCceEEEECC---------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGT---------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFA 89 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA 89 (562)
..|+.++|+++++.+|+++|+++.+ +.+||+||.+++.++|++|.+. +++||+|+++++|++++++++||
T Consensus 20 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA 98 (631)
T PRK07769 20 NTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFG 98 (631)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHH
Confidence 3589999999999999999998632 5799999999999999999987 89999999999999999999999
Q ss_pred hhhccceEEec-CCCCC--HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 90 VPMAGAVLSAL-NTRLD--SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 90 ~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
|+++|++++|+ ++..+ .+++.++++.+++++++++.+..+.+.......+... .+.++.++....
T Consensus 99 ~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-------- 166 (631)
T PRK07769 99 ALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKE----RPRVIAVDAVPD-------- 166 (631)
T ss_pred HHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccc----cceEEEcccccc--------
Confidence 99999999999 45554 6789999999999999999876555444322221100 122222211000
Q ss_pred cCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecc
Q 008535 167 ANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLD 246 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~p 246 (562)
.. .... ...+..++++++|+|||||||.||||.+||+++..........+++..+++++..+|
T Consensus 167 -------------~~---~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~P 229 (631)
T PRK07769 167 -------------EV---GATW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLP 229 (631)
T ss_pred -------------cc---cccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCC
Confidence 00 0000 011245689999999999999999999999999988887778888999999999999
Q ss_pred cccchhhHHHHHhHhhceEEEEecc--C--CHHHHHHHHHhcCe---EEEEcchHHHHHHHhcc---c--cccccccceE
Q 008535 247 MFRCNGWCCTWAMAAVGGINVCIRT--V--SAKIIFDSILIHKV---THLCGQPRILNMIANAS---A--SDQNQLQRKV 314 (562)
Q Consensus 247 l~~~~gl~~~~~~~~~g~~~v~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~~---~--~~~~~l~~l~ 314 (562)
++|.+|+...+.+++.|+++++.++ + ++..+++.++++++ +.+..+|.++..++... . ....+++++|
T Consensus 230 l~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr 309 (631)
T PRK07769 230 FFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVK 309 (631)
T ss_pred CcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhhee
Confidence 9999999888888888999888753 3 89999999999886 78899999887765431 1 1134688999
Q ss_pred EEEEeCCCChHHHHHHHHh-c---CC---eeeccccCccccCcccccccCCCCCC-------------CcCCcc--cccc
Q 008535 315 IIVIAGVLPTIEVLEQVAN-F---GF---NIRHAYGMTEVLGPAIVRQWKPEGES-------------SALDHE--HEMT 372 (562)
Q Consensus 315 ~i~~~g~~l~~~~~~~~~~-~---~~---~l~~~YG~tE~~~~~~~~~~~~~~~~-------------~~~~~~--~~~~ 372 (562)
.+++||++++++..+.|.+ + |+ .+++.||+||+++.++.......... ..+... ....
T Consensus 310 ~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 389 (631)
T PRK07769 310 GLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVA 389 (631)
T ss_pred eEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCcee
Confidence 9999999999999998874 3 33 58999999998765554321110000 000000 0111
Q ss_pred ccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc------------------ccee
Q 008535 373 KHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR------------------NGWY 434 (562)
Q Consensus 373 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~ 434 (562)
...+|.+.++. .++|++.+++.+++.| +.|||+|+|++++.||+++++.+.+.|. +|||
T Consensus 390 ~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~ 466 (631)
T PRK07769 390 QVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWV 466 (631)
T ss_pred EEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCee
Confidence 23677777776 7788887678877766 7899999999999999999999998884 3899
Q ss_pred eeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhc-CCCcee--EEEEeeeC-------------------CC
Q 008535 435 HTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLS-NPKVLE--AAVVGKVD-------------------DQ 492 (562)
Q Consensus 435 ~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~-------------------~~ 492 (562)
+|||+|+++ ||+++|+||.||+||++|++|+|.+||++|.+ +|.|.+ ++|+++++ +.
T Consensus 467 ~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~ 545 (631)
T PRK07769 467 RTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPED 545 (631)
T ss_pred eccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCC
Confidence 999999996 99999999999999999999999999999996 899998 89999888 55
Q ss_pred CCceeEEEEEeCCCC-CCCHHHHHHHHhccCCC-CC-CCcEEEee---cccCCCCCcchHHHHhhhhhhhc
Q 008535 493 LKEVPVAFVKLKEGR-EASPEELVTFCGDELPS-CM-VPRAIFFE---DIPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 493 ~~~~~v~~v~~~~~~-~~~~~~l~~~~~~~l~~-~~-~p~~i~~~---~lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
.++.++++|++.++. ..+.++|.+++++++.. ++ .|+.+.++ +||+|++||++|++|++.|.+..
T Consensus 546 ~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~ 616 (631)
T PRK07769 546 TSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGS 616 (631)
T ss_pred CCccEEEEEEecCccccccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCC
Confidence 788999999988763 46788999999999985 56 48777765 39999999999999999887553
No 47
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=5.4e-66 Score=550.85 Aligned_cols=513 Identities=19% Similarity=0.210 Sum_probs=396.0
Q ss_pred CCCChHH-HHHHHHHHcCCceEEEECC--------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Q 008535 18 VPLTPID-FLERAAHVYGDATSIIYGT--------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHF 88 (562)
Q Consensus 18 ~~~ti~~-~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 88 (562)
...|+.+ .|+++++.+|+++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|
T Consensus 172 ~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~L 251 (728)
T PLN03052 172 AVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYL 251 (728)
T ss_pred CEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4456654 5666666789999998754 379999999999999999999999999999999999999999999
Q ss_pred HhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch------HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC
Q 008535 89 AVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV------EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS 162 (562)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
||+++|++++|+++.++.+++.+++++++++++|+++... +......... ...++.+.......
T Consensus 252 A~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~--------~~~~iv~~~~~~~~-- 321 (728)
T PLN03052 252 AIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK--------APKAIVLPADGKSV-- 321 (728)
T ss_pred HHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc--------CCcEEEEeCCCCcc--
Confidence 9999999999999999999999999999999999987532 1111111111 11222222111000
Q ss_pred cccccCCCCCCCCchhhhhhcccCc---c-ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCC
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKAD---F-EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDM 238 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 238 (562)
......+...|.+++...... . .......++++++|+|||||||.||||+++|.+++.........++++++
T Consensus 322 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~ 397 (728)
T PLN03052 322 ----RVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG 397 (728)
T ss_pred ----ccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence 000011234566655432110 0 01111245899999999999999999999999987776666666788999
Q ss_pred CeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEE
Q 008535 239 PVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIV 317 (562)
Q Consensus 239 ~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~ 317 (562)
|++++..++.|+++....+.++..|+++++.+. .++..+++.++++++|++.++|.+++.|.+.......+++++|.++
T Consensus 398 d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~ 477 (728)
T PLN03052 398 DIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFG 477 (728)
T ss_pred cEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEE
Confidence 999999999999998878889999999998863 5667899999999999999999999999876544556789999999
Q ss_pred EeCCCChHHHHHHHHh-cC-CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcc
Q 008535 318 IAGVLPTIEVLEQVAN-FG-FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMK 395 (562)
Q Consensus 318 ~~g~~l~~~~~~~~~~-~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 395 (562)
++|++++++...++.. ++ .++.+.||+||+++.+..... ..+.....+|.|.++. .++|+|. +++
T Consensus 478 s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~-----------~~~~~~g~~g~p~~g~-~v~v~d~-~g~ 544 (728)
T PLN03052 478 STGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSL-----------LQPQAFAAFSTPAMGC-KLFILDD-SGN 544 (728)
T ss_pred ecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCC-----------CCCCCCCccccCCCCc-eEEEECC-CCC
Confidence 9999999998877763 34 579999999999765443211 0111234577888887 8888885 688
Q ss_pred cccCCCCceeEEEEcchh--hhhhhcCCchhhHhhhc-----cc--eeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 396 SVPHDGKTLGEVMFRANT--VMLGYFKNPKATEEAFR-----NG--WYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 396 ~~~~~~~~~Gel~v~~~~--~~~gy~~~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
+++.|..+.|||+++++. ...+|+++. .....|. .| ||+|||++++|++|.+++.||+||+||++|.+|+
T Consensus 545 ~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~ 623 (728)
T PLN03052 545 PYPDDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVS 623 (728)
T ss_pred CCCCCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeC
Confidence 887664346999998653 234566553 2333331 23 9999999999999999999999999999999999
Q ss_pred hHHHHHHHh-cCCCceeEEEEeeeCCCCC-ceeEEEEEeC--CCCCCCHHHHHH----HHhccCCCCCCCcEEEeec-cc
Q 008535 467 SLEVEAVLL-SNPKVLEAAVVGKVDDQLK-EVPVAFVKLK--EGREASPEELVT----FCGDELPSCMVPRAIFFED-IP 537 (562)
Q Consensus 467 ~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~v~~v~~~--~~~~~~~~~l~~----~~~~~l~~~~~p~~i~~~~-lP 537 (562)
|.|||++|. .+|.|.+++|++++++..| +.++++|++. ++...+.++|++ ++++++++++.|+.|++++ ||
T Consensus 624 ~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP 703 (728)
T PLN03052 624 SVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFP 703 (728)
T ss_pred HHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCC
Confidence 999999996 7899999999999998766 8899999987 454445455554 5667889999999888665 99
Q ss_pred CCCCCcchHHHHhhhhhhhcc
Q 008535 538 VNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 538 ~t~~GKv~r~~l~~~~~~~~~ 558 (562)
+|++||++|+.|++.+.+...
T Consensus 704 ~T~sGKi~Rr~Lr~~~~~~~~ 724 (728)
T PLN03052 704 RTASNKVMRRVLRQQLAQELS 724 (728)
T ss_pred CCCchHHHHHHHHHHHHhhhh
Confidence 999999999999999987765
No 48
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-66 Score=537.36 Aligned_cols=492 Identities=21% Similarity=0.236 Sum_probs=401.6
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQL-KISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
+.++.++|++.+. ++++++.+.++.+||.||.+++.++|..|.+. |++++++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 3478899988875 78999999999999999999999999999996 89999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|+++..+.+++.++++.++++++++++...+.+.... . ...++.++. ..+
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~------~~~~~~~~~-------------------~~~ 132 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----P------GVRVINVDS-------------------PAW 132 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----c------CceEEEecc-------------------ccH
Confidence 99999999999999999999999999987665443321 0 111121111 112
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-H
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-T 256 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~ 256 (562)
.+.+..............++++++++|||||||.||+|+++|+++..+.......+++..+|++++.+|++|.+++.. .
T Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 212 (529)
T PRK07867 133 ADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGW 212 (529)
T ss_pred HHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHH
Confidence 222221111111112345689999999999999999999999999888888888888999999999999999999875 4
Q ss_pred HHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCC
Q 008535 257 WAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGF 336 (562)
Q Consensus 257 ~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~ 336 (562)
+..+..|+++++.+.+++..+++.++++++|++.++|..+..++...+......+++|. +.||+.+++...+..+.++.
T Consensus 213 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~~~~~~~~g~ 291 (529)
T PRK07867 213 AVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDIARFARRFGC 291 (529)
T ss_pred HHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHHHHHHHHhCC
Confidence 45667788887777889999999999999999999999999988765433333456774 56888887765444446799
Q ss_pred eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCC----------CceeE
Q 008535 337 NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDG----------KTLGE 406 (562)
Q Consensus 337 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~----------~~~Ge 406 (562)
++++.||+||++........ .....+|.+.+ ++++++.+++..++.+. +..||
T Consensus 292 ~l~~~YG~TE~~~~~~~~~~--------------~~~~~~g~~~~---~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Ge 354 (529)
T PRK07867 292 VVVDGFGSTEGGVAITRTPD--------------TPPGALGPLPP---GVAIVDPDTGTECPPAEDADGRLLNADEAIGE 354 (529)
T ss_pred cEEEeecccccccccccCCC--------------CCCCCcCCCCC---CEEEEECCCCCCCCCCccccccccccCCcceE
Confidence 99999999999754432110 01123454443 46777765666666552 12799
Q ss_pred EEE-cchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 407 VMF-RANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 407 l~v-~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
|++ +|++++.||+++++.+...|.+|||+|||+|+++++|.+++.||.||+|+++|.+++|.+||++|.++|+|.+++|
T Consensus 355 l~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V 434 (529)
T PRK07867 355 LVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAV 434 (529)
T ss_pred EEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEE
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc--CCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhccc
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE--LPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAVG 559 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~~ 559 (562)
++.+++..++.++++++..++...+.++++++++++ ++.+++|..+.+++ ||+|++||++|+.|++......++
T Consensus 435 ~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~~~ 511 (529)
T PRK07867 435 YAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCADP 511 (529)
T ss_pred EeccCCCCCeeEEEEEEECCCCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCCCC
Confidence 999999999999999999887778889999999875 99999999887654 999999999999999988766543
No 49
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.2e-65 Score=537.06 Aligned_cols=496 Identities=24% Similarity=0.334 Sum_probs=407.6
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
...++.++++++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 45589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchH-----HHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVE-----VVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+++++..+.+++.++++.+++++++++..... ........... ...++.......
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------------- 160 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPT------LRNIIVAGQTRV-------------- 160 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCc------ceEEEEecCCCC--------------
Confidence 99999999999999999999999999876421 11111111100 112222111100
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchh
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 252 (562)
.............. .......++++++++|||||||.||+|.+||.++..+.......+.+..+|+++..+|++|.++
T Consensus 161 -~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 161 -EAELFLWLESPAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYP 238 (527)
T ss_pred -cchhhHHhhCcCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhh
Confidence 00011111111111 1112345689999999999999999999999999888888778888999999999999999999
Q ss_pred hHH--HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHH
Q 008535 253 WCC--TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQ 330 (562)
Q Consensus 253 l~~--~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~ 330 (562)
+.. .+.++..|+++++.+.+++..+++.+++++++++.++|.++..|++..+.....++++|.+++||++++.++.+.
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~ 318 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARR 318 (527)
T ss_pred hhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHH
Confidence 864 677788899988888889999999999999999999999999998877666667889999999999999999999
Q ss_pred HH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEE
Q 008535 331 VA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMF 409 (562)
Q Consensus 331 ~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v 409 (562)
++ .++.++++.||+||++...... .. ........+|.+.++...+++++. +++.++.+ +.|||++
T Consensus 319 ~~~~~g~~~~~~YG~tE~~~~~~~~--~~---------~~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~v 384 (527)
T TIGR02275 319 VPAVFGCQLQQVFGMAEGLVNYTRL--DD---------PAEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLLT 384 (527)
T ss_pred HHHHhCCeEEeeeccCccCccccCC--CC---------ccccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEEe
Confidence 97 5799999999999965332211 00 001112356776654337777775 56666665 7799999
Q ss_pred cchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 410 RANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 410 ~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
+|+.++.||+++++.+...|. +|||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||+.|.++|+|.+++|++.
T Consensus 385 ~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 464 (527)
T TIGR02275 385 RGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSM 464 (527)
T ss_pred cCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEec
Confidence 999999999999999988884 7999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 489 VDDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
+++..++.++++|++.+. ..+.+++++++++. ++.+++|..+.+++ ||+|++||++|+.|+
T Consensus 465 ~~~~~~~~~~a~vv~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 465 PDELLGEKSCAFIVVRDP-ALKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred CCcccccEEEEEEEECCC-CCCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 999888999999988765 46788999999985 99999999888654 999999999999875
No 50
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=8.6e-66 Score=540.24 Aligned_cols=503 Identities=23% Similarity=0.348 Sum_probs=410.7
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC--CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG--TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
..|+.++|.+.++.+|+++|+.+. ++.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 468999999999999999999874 578999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|+++..+.+++.++++.+++++++++....+.+.... . .++.+..... .+...
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-----------~-~~i~~~~~~~-------------~~~~~ 161 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG-----------L-PVIVLGEEKI-------------EGAVN 161 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC-----------C-cEEEecCCCC-------------CCccc
Confidence 999999999999999999999999999988766553310 1 1222221110 11233
Q ss_pred hhhhhhcccCc--cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC--CCCCCeeeeecccccchh
Q 008535 177 YNDLLEMGKAD--FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD--VRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g 252 (562)
|.+++...... ........++++++++|||||||.||||.++|+++..+......... ....+..+..+|++|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g 241 (546)
T PLN02330 162 WKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYG 241 (546)
T ss_pred HHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHH
Confidence 44444332211 11112234679999999999999999999999998776543322222 223457889999999998
Q ss_pred hHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccccccc--ceEEEEEeCCCChHHHHH
Q 008535 253 WCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQ--RKVIIVIAGVLPTIEVLE 329 (562)
Q Consensus 253 l~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~--~l~~i~~~g~~l~~~~~~ 329 (562)
+.. .+.++..|++++..+.+++..+++.++++++|.+.++|.++..|+.........+. .+|.+++||++++++..+
T Consensus 242 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~ 321 (546)
T PLN02330 242 ITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLT 321 (546)
T ss_pred HHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHH
Confidence 764 56667788898888889999999999999999999999999999886544434443 478999999999999999
Q ss_pred HHH-hc-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 330 QVA-NF-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 330 ~~~-~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
++. .+ +.++++.||+||++.+......... .........+|.+.++. .+++++.+++.+++.| +.|||
T Consensus 322 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~-------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel 391 (546)
T PLN02330 322 AFEAKFPGVQVQEAYGLTEHSCITLTHGDPEK-------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGEL 391 (546)
T ss_pred HHHHHcCCCeEEecccccccccceecCCCccc-------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEE
Confidence 998 45 8999999999998755433211100 00011224577777777 7888887677777776 67999
Q ss_pred EEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 408 MFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
+++|+.++.||++++..+.+.+. +|||+|||+|++++||.+++.||.+|+|+++|++|+|.+||+++.+++.|.+++|+
T Consensus 392 ~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 471 (546)
T PLN02330 392 CVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 471 (546)
T ss_pred EEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEE
Confidence 99999999999999998888774 79999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEe-ecccCCCCCcchHHHHhhhhhhh
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFF-EDIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~-~~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+++++..++.++++|++.++...+.++++++++++++.+++|+.+.+ .++|+|++||++|++|++++...
T Consensus 472 ~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 472 PLPDEEAGEIPAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred eccccccCceeEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 99999889999999998877667788999999999999999997775 45999999999999999998654
No 51
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-65 Score=535.40 Aligned_cols=509 Identities=24% Similarity=0.313 Sum_probs=423.0
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
...+.|+.++|.++++++|+++|+++.+..+||.||.+.+.++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~ 87 (524)
T PRK06188 8 LHSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGL 87 (524)
T ss_pred hcCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 34566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEecc-chHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQ-FVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGS 174 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
+++++++..+.+++..+++.++++.++++.. ............. ....++.+..... .
T Consensus 88 ~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---------------~ 146 (524)
T PRK06188 88 RRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP------SLKHVLTLGPVPD---------------G 146 (524)
T ss_pred EEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC------CceEEEEeCCccc---------------h
Confidence 9999999999999999999999999999876 3333322211111 0122222221110 0
Q ss_pred CchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhH
Q 008535 175 LDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWC 254 (562)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~ 254 (562)
....+....... ........++++++++|||||||.||+|.++|.++..........+.+..++++++..|++|.+++.
T Consensus 147 ~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 225 (524)
T PRK06188 147 VDLLAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF 225 (524)
T ss_pred hhHHHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH
Confidence 000000000000 0111112345799999999999999999999999999888888889999999999999999998875
Q ss_pred HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-h
Q 008535 255 CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-N 333 (562)
Q Consensus 255 ~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~ 333 (562)
.+..++.|+++++.+..++..+++.++++++++++++|.+++.|++........++++|.+++||++++++..+.+. .
T Consensus 226 -~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~ 304 (524)
T PRK06188 226 -FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIER 304 (524)
T ss_pred -HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHH
Confidence 56778889999999889999999999999999999999999999988766667889999999999999999877776 5
Q ss_pred cCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchh
Q 008535 334 FGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANT 413 (562)
Q Consensus 334 ~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~ 413 (562)
++..+++.||+||++..+........ ..........+|.|.++. .+++++. ++++++.+ +.|||+++|+.
T Consensus 305 ~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~ 374 (524)
T PRK06188 305 FGPIFAQYYGQTEAPMVITYLRKRDH------DPDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPL 374 (524)
T ss_pred hCchhhheeCccccCCceeecCchhc------cccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcc
Confidence 68889999999999765554322111 001122334678888777 7888886 47777765 67999999999
Q ss_pred hhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCC
Q 008535 414 VMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQL 493 (562)
Q Consensus 414 ~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 493 (562)
++.||++++..+...|.+|||+|||+|+++++|.+++.||.+|+|+++|++++|.+||++|.++++|.+++|++.+++..
T Consensus 375 ~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~ 454 (524)
T PRK06188 375 VMDGYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKW 454 (524)
T ss_pred hhhhhcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred CceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 494 KEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 494 ~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
++.+++++++.+......+++++++++.++.+++|..+.+++ ||+|++||++|++|++.|.+.+
T Consensus 455 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~ 519 (524)
T PRK06188 455 GEAVTAVVVLRPGAAVDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGR 519 (524)
T ss_pred CceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhc
Confidence 889999999887766778899999999999999999988665 9999999999999999986654
No 52
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-66 Score=557.14 Aligned_cols=475 Identities=21% Similarity=0.246 Sum_probs=391.7
Q ss_pred ChHHHHHHHHHH--cCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 21 TPIDFLERAAHV--YGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 21 ti~~~l~~~a~~--~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
|+.++|.++++. +|+++|+.+. ..+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 889999998886 7999999875 4899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++|.++.+++.++++.++++++|++......+... .+... .
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--------------~~~~~------------------------~ 125 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQPS--------------RVAEA------------------------A 125 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc--------------ccchh------------------------h
Confidence 999999999999999999999999986543322110 00000 0
Q ss_pred hhhhcc-cCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHH-hhcCCCCCCeeeeecccccchhhH-H
Q 008535 179 DLLEMG-KADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQI-SRCDVRDMPVFLWTLDMFRCNGWC-C 255 (562)
Q Consensus 179 ~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~gl~-~ 255 (562)
.+.... ........+..++++++++|||||||.||||.++|+++........ ..+++...+++++..|++|.+++. .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 205 (705)
T PRK06060 126 ELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNS 205 (705)
T ss_pred hhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHH
Confidence 000000 0000011123567899999999999999999999999887766553 457888999999999999988875 4
Q ss_pred HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-
Q 008535 256 TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN- 333 (562)
Q Consensus 256 ~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~- 333 (562)
.+.++..|+++++.+ .+++..+...+.++++|+++++|+++..+++... ...++++|.+++||+++++++.+.+.+
T Consensus 206 ~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~ 283 (705)
T PRK06060 206 VWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEF 283 (705)
T ss_pred HHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHH
Confidence 667788899888876 4788889999999999999999999999987543 245789999999999999999999884
Q ss_pred c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcch
Q 008535 334 F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRAN 412 (562)
Q Consensus 334 ~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~ 412 (562)
+ +.++++.||+||++..+...... ......+|.|.++. .++|++. ++.+++.| +.|||+|+|+
T Consensus 284 ~~~~~~~~~YG~tE~~~~~~~~~~~------------~~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~ 347 (705)
T PRK06060 284 FGGIPILDGIGSTEVGQTFVSNRVD------------EWRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGP 347 (705)
T ss_pred cCCCceEeeeeccccCceEEeccCC------------CCCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccc
Confidence 4 58999999999997554332110 11124567777776 7888876 46666665 6799999999
Q ss_pred hhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCC
Q 008535 413 TVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQ 492 (562)
Q Consensus 413 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 492 (562)
.++.||+++++.+.. .+|||+|||+|++++||++++.||.||+||++|.+|+|.+||+.|.+++.|.+++|++.++..
T Consensus 348 ~v~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~ 425 (705)
T PRK06060 348 AIAKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVREST 425 (705)
T ss_pred hhhhhhhCCCccccc--CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCcc
Confidence 999999999876532 478999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEEeCCCCCCCH---HHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhh
Q 008535 493 LKEVPVAFVKLKEGREASP---EELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 493 ~~~~~v~~v~~~~~~~~~~---~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~ 554 (562)
.++.++++++..++...+. ++++++++++|+.|++|..+.+++ ||+|++||++|++|++.+.
T Consensus 426 ~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 426 GASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred CCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 8889999998776543333 578899999999999999888655 9999999999999998764
No 53
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.4e-65 Score=537.55 Aligned_cols=509 Identities=25% Similarity=0.356 Sum_probs=417.8
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECC-eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGT-VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
.+.+.|+.++|++.++.+|+++|+.+.+ +++||+||++++.++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4566789999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccc-----hHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQF-----VEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANN 169 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (562)
++++|+++..+.+++..+++.+++++++++... .+.+......+.. ...++.++....
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----------- 161 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQ------LQQIVGVDKLAP----------- 161 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCC------CcEEEEeCCcCC-----------
Confidence 999999999999999999999999999997643 2222222222110 122322221110
Q ss_pred CCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccccc
Q 008535 170 FPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFR 249 (562)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~ 249 (562)
......+.++....+... .......+++++|+|||||||.||+|.+||+++..........+++.+++++++..|++|
T Consensus 162 -~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 239 (547)
T PRK06087 162 -ATSSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH 239 (547)
T ss_pred -CcCccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHH
Confidence 001123444433322111 112345689999999999999999999999999888877777888999999999999999
Q ss_pred chhhHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHH
Q 008535 250 CNGWCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 250 ~~gl~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
.+++.. .+.++..|+++++.+.+++..+++.++++++++++++|..+..++.........++++|.+++||++++++..
T Consensus 240 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~ 319 (547)
T PRK06087 240 ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVA 319 (547)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHH
Confidence 998764 5566777888888888999999999999999999998888887777665555678899999999999999999
Q ss_pred HHHHhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEE
Q 008535 329 EQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVM 408 (562)
Q Consensus 329 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~ 408 (562)
+.+.+.++++++.||+||+++..+..... .........|.+.++. .+++++. ++.+++.+ +.|||+
T Consensus 320 ~~~~~~~~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~ 385 (547)
T PRK06087 320 RECQQRGIKLLSVYGSTESSPHAVVNLDD----------PLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEA 385 (547)
T ss_pred HHHHHcCCcEEEEecccccCCccccCCCc----------chhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEE
Confidence 98887799999999999998765543210 0011123456676666 7778774 66777665 679999
Q ss_pred EcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEe
Q 008535 409 FRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVG 487 (562)
Q Consensus 409 v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 487 (562)
++|+.++.||+++++.+...|. +|||+|||++++|++|.+++.||.+|+|+.+|.+++|.+||++|.++++|.++++++
T Consensus 386 v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 386 SRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred EecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999888884 799999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEeCC-CCCCCHHHHHHHHh-ccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 488 KVDDQLKEVPVAFVKLKE-GREASPEELVTFCG-DELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 488 ~~~~~~~~~~v~~v~~~~-~~~~~~~~l~~~~~-~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
.+++..++.++++++..+ +...+.+++.+++. +.++.+++|..+.+++ ||+|++||++|++|++.+.++.
T Consensus 466 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 466 MPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred cCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 998888899999999875 44456788888875 6799999999988665 9999999999999999888764
No 54
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-65 Score=536.58 Aligned_cols=522 Identities=27% Similarity=0.437 Sum_probs=419.0
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEE--CC--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIY--GT--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~--~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
+-..|+|+.++|+++++.+|+++++.. .+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 5 MQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred hhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 345678999999999999999999974 22 67999999999999999999999999999999999999999999999
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
+++|++++|+++.++.+++..+++.+++++++++.+..+.+.+....... ...++.+.+..... ...
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------~~~ 151 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPS------VERYVVLTDAAHMP-------QTT 151 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCC------ccEEEEeccccccc-------ccC
Confidence 99999999999999999999999999999999998877776655433221 22222222211100 000
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHH--HHHHHhhcCCCCCCeeeeecccc
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLN--SLAQISRCDVRDMPVFLWTLDMF 248 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~--~~~~~~~~~~~~~~~~l~~~pl~ 248 (562)
..+...+.++........ ......++++++++|||||||.||+|.+||++.+.. .......+++..+|+++...|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 152 LKNAVAYEEWIAEADGDF-AWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLF 230 (542)
T ss_pred ccccccHHHHhccCCccc-CcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHH
Confidence 012234444444332221 112245678999999999999999999999974322 22334566788999999999999
Q ss_pred cchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHH
Q 008535 249 RCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEV 327 (562)
Q Consensus 249 ~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~ 327 (562)
|.+++...+.++..|+++++.. .+++..+++.++++++|++.++|++++.|.+.......+++++|.++++|++++++.
T Consensus 231 h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~ 310 (542)
T PRK06018 231 HANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSM 310 (542)
T ss_pred HHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHH
Confidence 9999887777888888887764 578899999999999999999999999998876655567889999999999999999
Q ss_pred HHHHHhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 328 LEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 328 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
.+.|++++.++++.||+||++.+++.+.......... ...........|.+.++. .++|.+. ++..++.++++.|||
T Consensus 311 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel 387 (542)
T PRK06018 311 IKAFEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLP-GDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRL 387 (542)
T ss_pred HHHHHHhCCCeEeeecccccCcccccccCccccccCC-chhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEE
Confidence 9999888899999999999987765443221111100 000111123567777666 7777775 677777765567999
Q ss_pred EEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEe
Q 008535 408 MFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVG 487 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 487 (562)
+++|+.++.||++... .....+|||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||..+.++|.|.+++|++
T Consensus 388 ~i~g~~~~~gy~~~~~--~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 465 (542)
T PRK06018 388 KVRGPAVAAAYYRVDG--EILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIG 465 (542)
T ss_pred EEecCCcchhhhcCcc--cEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEe
Confidence 9999999999998422 11124789999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 488 KVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 488 ~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
.+++..++.+.+++++.++...+.+++.++++++++.+.+|..+.+++ ||+|++||++|++|++.|.+
T Consensus 466 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 466 VYHPKWDERPLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred ccCCCcCceeEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 999988889999999888777788899999999999999999887655 99999999999999999876
No 55
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.2e-65 Score=538.61 Aligned_cols=521 Identities=27% Similarity=0.417 Sum_probs=422.4
Q ss_pred cccCCCCCChHHHHHHHHHHcCCceEEEE--CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 13 ASANNVPLTPIDFLERAAHVYGDATSIIY--GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 13 ~~~~~~~~ti~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
.+......||.++|++.++.+|+++|+.+ .++.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 9 ~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~ 88 (559)
T PRK08315 9 TDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFAT 88 (559)
T ss_pred CcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHH
Confidence 45555667999999999999999999988 4568999999999999999999999999999999999999999999999
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH-----HHHHHHhhcCCCCc----C---CCCCceeccCCCCC
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE-----VVQNALDILSPNHK----C---DKAPLLVTIPECDH 158 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~ 158 (562)
+++|++++|++|..+.+++..+++.+++++++++..... .+......+..... . .....++.+...
T Consensus 89 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 166 (559)
T PRK08315 89 AKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-- 166 (559)
T ss_pred HHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeeccc--
Confidence 999999999999999999999999999999999876432 12111111100000 0 000111111110
Q ss_pred CCCCcccccCCCCCCCCchhhhhhcccC----c-cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc
Q 008535 159 YQPSTCSVANNFPSGSLDYNDLLEMGKA----D-FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC 233 (562)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~ 233 (562)
...+...+.++...... . ........++++++++|||||||.||+|.+||+++..+.......+
T Consensus 167 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~ 235 (559)
T PRK08315 167 -----------KHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM 235 (559)
T ss_pred -----------CCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc
Confidence 01122334443322210 0 0011123467899999999999999999999999998888888888
Q ss_pred CCCCCCeeeeecccccchhhHH-HHHhHhhceEEEEe-ccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccccccc
Q 008535 234 DVRDMPVFLWTLDMFRCNGWCC-TWAMAAVGGINVCI-RTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQ 311 (562)
Q Consensus 234 ~~~~~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~ 311 (562)
++.++|+++..+|++|.+++.. .+.++..|+++++. ..+++..+++.+.++++|+++++|.++..++.........++
T Consensus 236 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~ 315 (559)
T PRK08315 236 KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLS 315 (559)
T ss_pred CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCch
Confidence 9999999999999999999865 55666777777744 468999999999999999999999999999887665566788
Q ss_pred ceEEEEEeCCCChHHHHHHHH-hcCC-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceec
Q 008535 312 RKVIIVIAGVLPTIEVLEQVA-NFGF-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVK 389 (562)
Q Consensus 312 ~l~~i~~~g~~l~~~~~~~~~-~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 389 (562)
++|.++++|++++.+..+.+. .++. ++++.||+||++.+++....... .......+|.|.++. .++++
T Consensus 316 ~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~vG~p~~~~-~v~i~ 385 (559)
T PRK08315 316 SLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP---------LEKRVTTVGRALPHL-EVKIV 385 (559)
T ss_pred hhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc---------hhhccCCCCccCCCc-EEEEE
Confidence 999999999999999998887 5555 49999999999876554322111 011235678888777 88888
Q ss_pred ccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechH
Q 008535 390 QQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSL 468 (562)
Q Consensus 390 ~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 468 (562)
+.++++.++.+ +.|||+|+|+.++.||++++..+...| .++||+|||+|+++++|.+++.||.+|+|+++|.+++|.
T Consensus 386 d~~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~ 463 (559)
T PRK08315 386 DPETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPR 463 (559)
T ss_pred cCccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHH
Confidence 88768888766 679999999999999999999888887 688999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHH
Q 008535 469 EVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKF 547 (562)
Q Consensus 469 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~ 547 (562)
+||++|.++++|.+++|++.+++..++.++++|+..++...+.++++++++++++.+++|..+.+++ ||+|++||++|.
T Consensus 464 eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~ 543 (559)
T PRK08315 464 EIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKF 543 (559)
T ss_pred HHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHH
Confidence 9999999999999999999998887888999998877666678899999999999999999988665 999999999999
Q ss_pred HHhhhhhhhcc
Q 008535 548 VLRGKVNATAV 558 (562)
Q Consensus 548 ~l~~~~~~~~~ 558 (562)
+|++++....+
T Consensus 544 ~L~~~~~~~~~ 554 (559)
T PRK08315 544 KMREMMIEELG 554 (559)
T ss_pred HHHHHHHhhhc
Confidence 99998776543
No 56
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-66 Score=548.12 Aligned_cols=512 Identities=17% Similarity=0.226 Sum_probs=389.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC--C---eeccHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcCC
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG--T---VRFSWRQTHQICLKLASALAQL---KISRG-----------DIVAAMAPN 79 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~el~~~~~~~a~~L~~~---gv~~g-----------d~V~i~~~~ 79 (562)
-.||.++|.++++.+|+++|+.+. + +.+||+||.+++.++|++|.+. |+++| |+|+++++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 459999999999999999999873 2 6799999999999999999974 99999 999999999
Q ss_pred cHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCC
Q 008535 80 IPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHY 159 (562)
Q Consensus 80 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (562)
+++|+++++||+++|++.+|+++.++.+++.++++++++++++++.+..+.+......++. ...++.++.....
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~------l~~ii~~~~~~~~ 213 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPH------LKKLIILDTLIKS 213 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCC------ceEEEEECCCCcc
Confidence 9999999999999999999999999999999999999999999987766665544333221 3445555431110
Q ss_pred C-----------------CCcccc------------cCCCC-------------------------CCCCchhhhhhccc
Q 008535 160 Q-----------------PSTCSV------------ANNFP-------------------------SGSLDYNDLLEMGK 185 (562)
Q Consensus 160 ~-----------------~~~~~~------------~~~~~-------------------------~~~~~~~~~~~~~~ 185 (562)
. ...... ..... .....+.++.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (746)
T PTZ00342 214 KEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT 293 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc
Confidence 0 000000 00000 00011222221111
Q ss_pred CccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc--CCCCCCeeeeecccccchhhHHHHHhHhhc
Q 008535 186 ADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC--DVRDMPVFLWTLDMFRCNGWCCTWAMAAVG 263 (562)
Q Consensus 186 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g 263 (562)
. .....+..++|+++|+|||||||.||||++||+++.+.+....... .....+++++.+|++|.+++...+.+++.|
T Consensus 294 ~-~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G 372 (746)
T PTZ00342 294 T-NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLG 372 (746)
T ss_pred c-CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcC
Confidence 1 1112234678999999999999999999999999988876554321 233568999999999999998888888889
Q ss_pred eEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcc--------cccc----------------------------
Q 008535 264 GINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANAS--------ASDQ---------------------------- 307 (562)
Q Consensus 264 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--------~~~~---------------------------- 307 (562)
+++++.+. ++..+++.|++++||+++++|.++..|.... ...+
T Consensus 373 ~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v 451 (746)
T PTZ00342 373 GTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHI 451 (746)
T ss_pred CEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHH
Confidence 99888765 8999999999999999999999999987521 0000
Q ss_pred ------ccccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccc
Q 008535 308 ------NQLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNN 380 (562)
Q Consensus 308 ------~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 380 (562)
...+++|.+++||+++++++.+.|+ .+|++++++||+||+++.++.... .......+|.|.
T Consensus 452 ~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~------------~~~~~gsvG~p~ 519 (746)
T PTZ00342 452 SSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHA------------DDNNTESIGGPI 519 (746)
T ss_pred HHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccC------------CCCCcccccCcC
Confidence 0025899999999999999999998 579999999999999776554221 011235678776
Q ss_pred -cccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEecccccee
Q 008535 381 -LLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDII 458 (562)
Q Consensus 381 -~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i 458 (562)
++. .+++++.++......+ ..|||+++||.++.|||++|+.|.+.|. +|||+|||+|++|+||+++++||.+|+|
T Consensus 520 ~pg~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlI 596 (746)
T PTZ00342 520 SPNT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLV 596 (746)
T ss_pred CCcE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeE
Confidence 665 7888775443332222 4599999999999999999999999995 9999999999999999999999999999
Q ss_pred e-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCC----------------CC-CCH---------
Q 008535 459 I-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEG----------------RE-ASP--------- 511 (562)
Q Consensus 459 ~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~----------------~~-~~~--------- 511 (562)
| .+|++|+|.+||+++.++|.|.+++|++.+. ...++|+|++++. -. .+.
T Consensus 597 kls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~---~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~ 673 (746)
T PTZ00342 597 KLSQGEYIETDMLNNLYSQISFINFCVVYGDDS---MDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETI 673 (746)
T ss_pred EeCCCEEEchHHHHHHHhcCCCccEEEEEccCC---ccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhh
Confidence 9 6899999999999999999999999998632 2358888887641 00 010
Q ss_pred --HHHHHH----H-----hccCCCCCCCcEEEeec--cc----CCCCCcchHHHHhhhhhhh
Q 008535 512 --EELVTF----C-----GDELPSCMVPRAIFFED--IP----VNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 512 --~~l~~~----~-----~~~l~~~~~p~~i~~~~--lP----~t~~GKv~r~~l~~~~~~~ 556 (562)
.++.+. + +..++.+.+++.+.+.+ +. +|++.|+.|+.+.+.|...
T Consensus 674 ~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~ 735 (746)
T PTZ00342 674 NNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFF 735 (746)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHH
Confidence 011221 1 23589999999888765 32 8999999999999988754
No 57
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-65 Score=535.37 Aligned_cols=488 Identities=23% Similarity=0.318 Sum_probs=391.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
..|+.++|.+++ .|+++|+++.+.++||.||.+++.++|..|.+.|+ ++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~ 79 (540)
T PRK13388 2 RDTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVL 79 (540)
T ss_pred chhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEE
Confidence 357889998764 79999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|++|.++.+++..+++.+++++++++.+..+.+.... .+ ....+.++. ..+
T Consensus 80 v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~-------~~~~i~~~~-------------------~~~ 131 (540)
T PRK13388 80 VGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LP-------GVRVLDVDT-------------------PAY 131 (540)
T ss_pred EEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--cc-------CceEEEccc-------------------hhh
Confidence 99999999999999999999999999877655443321 00 111222211 011
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHH
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTW 257 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~ 257 (562)
.+++...... .......++++++++|||||||.||||.++|+++..........+++..+|++++.+|++|.+++...+
T Consensus 132 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~ 210 (540)
T PRK13388 132 AELVAAAGAL-TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGW 210 (540)
T ss_pred hhhhccccCc-CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHH
Confidence 1221111111 111124568999999999999999999999999988888888888999999999999999999887644
Q ss_pred -HhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcC
Q 008535 258 -AMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFG 335 (562)
Q Consensus 258 -~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~ 335 (562)
.++..|+++++.+.+++..+++.+++++++++..+|..+..++...........+++.+ . |+.+.++..+.|. .++
T Consensus 211 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~ 288 (540)
T PRK13388 211 APAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRFG 288 (540)
T ss_pred HHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHhC
Confidence 45777888887777899999999999999999999999999987654332333456643 3 4455666666666 568
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccC------------CcccccCCCCc
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQN------------TMKSVPHDGKT 403 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~------------~~~~~~~~~~~ 403 (562)
.++++.||+||++.++..... .....+|.|.+ ++++.+.+ ++..+.. +++
T Consensus 289 ~~l~~~YG~tE~~~~~~~~~~--------------~~~~~vG~p~~---g~~i~~~~~~~~~~~~~~d~~g~~~~~-~~~ 350 (540)
T PRK13388 289 CQVEDGYGSSEGAVIVVREPG--------------TPPGSIGRGAP---GVAIYNPETLTECAVARFDAHGALLNA-DEA 350 (540)
T ss_pred CceecccccccccceeecCCC--------------CCCCCCCCCCC---CcEEEcCCCCccccceeccCccccccC-CCc
Confidence 999999999999866543210 01123454443 34544332 2222222 235
Q ss_pred eeEEEEc-chhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCcee
Q 008535 404 LGEVMFR-ANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLE 482 (562)
Q Consensus 404 ~Gel~v~-~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 482 (562)
.|||+++ |++++.||+++++.+.+.|.+|||+|||+|++|++|++++.||.+|+||++|.+|+|.+||++|.++|+|.+
T Consensus 351 ~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~ 430 (540)
T PRK13388 351 IGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINR 430 (540)
T ss_pred ceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceE
Confidence 7999998 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc--CCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhhc
Q 008535 483 AAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE--LPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 483 ~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
|+|++.+++..|+.+++++++.++...+.++++++++.+ ++.+++|..+++. +||+|++||++|++|++......
T Consensus 431 ~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~~ 508 (540)
T PRK13388 431 VAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWATG 508 (540)
T ss_pred EEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCCC
Confidence 999999998888888899988877767788999999764 9999999998864 59999999999999999876654
No 58
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-65 Score=536.15 Aligned_cols=517 Identities=28% Similarity=0.434 Sum_probs=417.1
Q ss_pred ccCCCCCChHHHHHHHHHHcCCceEEEE--CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 14 SANNVPLTPIDFLERAAHVYGDATSIIY--GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 14 ~~~~~~~ti~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
+......++.++|++.++++|+++|+++ .+..+||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+
T Consensus 12 ~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~ 91 (558)
T PRK12583 12 DKPLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATA 91 (558)
T ss_pred CCCcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 3444556899999999999999999987 44689999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch-----HHHHHHHhhcCCCC----cCC---CCCceeccCCCCCC
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV-----EVVQNALDILSPNH----KCD---KAPLLVTIPECDHY 159 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~ 159 (562)
++|++++++++.++.+++..+++++++++++++.... ..+......+.... ... ....++......
T Consensus 92 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 169 (558)
T PRK12583 92 RIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP-- 169 (558)
T ss_pred hhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC--
Confidence 9999999999999999999999999999999986532 12222111111000 000 001111111000
Q ss_pred CCCcccccCCCCCCCCchhhhhhcccCc-----cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC
Q 008535 160 QPSTCSVANNFPSGSLDYNDLLEMGKAD-----FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD 234 (562)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~ 234 (562)
..+...|.+.....+.. ........++++++++|||||||.||+|.++|+++..++......++
T Consensus 170 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~ 238 (558)
T PRK12583 170 -----------PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLG 238 (558)
T ss_pred -----------CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhC
Confidence 01122333332221110 11112235678999999999999999999999999888888888889
Q ss_pred CCCCCeeeeecccccchhhHH-HHHhHhhceEEEEe-ccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccc
Q 008535 235 VRDMPVFLWTLDMFRCNGWCC-TWAMAAVGGINVCI-RTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQR 312 (562)
Q Consensus 235 ~~~~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~ 312 (562)
+..+|++++..|++|.+|+.. .+.++..|+++++. ...++..+++.++++++|+++++|.++..++.........+++
T Consensus 239 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 318 (558)
T PRK12583 239 LTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSS 318 (558)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchh
Confidence 999999999999999999865 45556666666644 3578999999999999999999999999888776555567889
Q ss_pred eEEEEEeCCCChHHHHHHHH-hcC-CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecc
Q 008535 313 KVIIVIAGVLPTIEVLEQVA-NFG-FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQ 390 (562)
Q Consensus 313 l~~i~~~g~~l~~~~~~~~~-~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~ 390 (562)
+|.+++||++++++..+.+. .++ ..+++.||+||++++++.+..... .......+|.|.++. .+++++
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~vG~p~~~~-~~~i~d 388 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD---------LERRVETVGRTQPHL-EVKVVD 388 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc---------cccccCCCCccCCCC-eEEEEC
Confidence 99999999999999999887 554 479999999999877655322111 112235678887776 888888
Q ss_pred cCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHH
Q 008535 391 QNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLE 469 (562)
Q Consensus 391 ~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 469 (562)
.+ +.+++.+ +.|||+++|+.++.||++++..+...| .++||+|||+|+++++|.+++.||.+|+|+++|.+|+|.+
T Consensus 389 ~~-~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~ 465 (558)
T PRK12583 389 PD-GATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPRE 465 (558)
T ss_pred CC-CCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHH
Confidence 75 6777665 679999999999999999999988887 6899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHH
Q 008535 470 VEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFV 548 (562)
Q Consensus 470 iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~ 548 (562)
||++|.++++|.+++|+++++...++.++++++..++...+.++++++++++++.+++|..+++++ ||+|++||++|++
T Consensus 466 IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~ 545 (558)
T PRK12583 466 IEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFR 545 (558)
T ss_pred HHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHH
Confidence 999999999999999999999888899999999887766778899999999999999999888654 9999999999999
Q ss_pred Hhhhhhhh
Q 008535 549 LRGKVNAT 556 (562)
Q Consensus 549 l~~~~~~~ 556 (562)
|+++..+.
T Consensus 546 L~~~~~~~ 553 (558)
T PRK12583 546 MREISIEE 553 (558)
T ss_pred HHHHHHhh
Confidence 99987665
No 59
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-65 Score=535.27 Aligned_cols=518 Identities=24% Similarity=0.280 Sum_probs=412.0
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
....++.++|.+.++.+|+++|+++.+.++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 7 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~ 86 (540)
T PRK06164 7 PRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGAT 86 (540)
T ss_pred cCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcE
Confidence 34558999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHH-HHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCC
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEV-VQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSL 175 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
++|+++..+.+++.++++.+++++++++.+.... +........... ......++.++......+. .. ..
T Consensus 87 ~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~---~~ 156 (540)
T PRK06164 87 VIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDA-LPPLRAIAVVDDAADATPA------PA---PG 156 (540)
T ss_pred EEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccc-cCCcceEEEeccCcccCCC------CC---cc
Confidence 9999999999999999999999999998764211 111111111000 0002223333211100000 00 00
Q ss_pred chhhhhhccc---CccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchh
Q 008535 176 DYNDLLEMGK---ADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 176 ~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 252 (562)
.+........ ..........++++++++|||||||.||+|.++|+++..+.......+++..++++++.+|++|.+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 236 (540)
T PRK06164 157 ARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFG 236 (540)
T ss_pred cccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHH
Confidence 0000000000 0000011234678999999999999999999999999998888888889999999999999999999
Q ss_pred hHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeC-CCChHHHHHHH
Q 008535 253 WCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAG-VLPTIEVLEQV 331 (562)
Q Consensus 253 l~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g-~~l~~~~~~~~ 331 (562)
+...+.++..|+++++.+.+++..+++.++++++|+++++|.+++.|.+.. .....+++++.+..+| .....+..+++
T Consensus 237 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 237 FSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred HHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHH
Confidence 988888899999999888899999999999999999999999999998872 2345678888887666 55666777777
Q ss_pred HhcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 332 ANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 332 ~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
...++++++.||+||+++.++...... .........|.+..+...+++.+.+++.+++.+ +.|||+|+|
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g 384 (540)
T PRK06164 316 RARGVPLTGLYGSSEVQALVALQPATD---------PVSVRIEGGGRPASPEARVRARDPQDGALLPDG--ESGEIEIRA 384 (540)
T ss_pred hhcCCceecceeeccccceeeccCCCC---------CCcceeccCccccCCCeEEEEecCCCCcCCCCC--CeeEEEEec
Confidence 766899999999999987655432111 011111234555433337788887777777666 779999999
Q ss_pred hhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeC
Q 008535 412 NTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVD 490 (562)
Q Consensus 412 ~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 490 (562)
++++.||++++..+...|. +|||+|||+|++|++|.+++.||.+|+|+++|.+++|.+||+.|..+++|.+++|++.+.
T Consensus 385 ~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 385 PSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR 464 (540)
T ss_pred ccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC
Confidence 9999999999999998885 789999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCC---cchHHHHhhhhhhhc
Q 008535 491 DQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTG---KVQKFVLRGKVNATA 557 (562)
Q Consensus 491 ~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~G---Kv~r~~l~~~~~~~~ 557 (562)
..++.+++++++.++...+.+++.++++++++.+++|..+.+.+ +|+|++| |++|+.|++.+++..
T Consensus 465 -~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~ 534 (540)
T PRK06164 465 -DGKTVPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARL 534 (540)
T ss_pred -CCceeEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhh
Confidence 44578889998877766788999999999999999999887655 9999999 999999999876553
No 60
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-65 Score=538.60 Aligned_cols=525 Identities=26% Similarity=0.360 Sum_probs=417.2
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEECC---eeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIYGT---VRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
+.+.+.|+.++|++.+..+|++.|+.+.+ +.+||+||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 45567899999999999999999988753 789999999999999999987 89999999999999999999999999
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
+++|++++++++..+.+++.++++.+++++++++....+.+......+.. ...++.++....... ......
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~---~~~~~~ 155 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPC------VRAVVFIGPSDADSA---AAHMPE 155 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCcc------ccEEEEecCcccccc---hhcccc
Confidence 99999999999999999999999999999999998877766655443221 222333322111000 000001
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHH--HhhcCCCCCCeeeeecccc
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQ--ISRCDVRDMPVFLWTLDMF 248 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~--~~~~~~~~~~~~l~~~pl~ 248 (562)
.....+|.++.+....... .....++++++++|||||||.||||.++|+++....... ...+.+..++++++.+|++
T Consensus 156 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 234 (576)
T PRK05620 156 GIKVYSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIY 234 (576)
T ss_pred ccccccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChH
Confidence 1123456666653322211 123456899999999999999999999999986554432 3356788999999999999
Q ss_pred cchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHH
Q 008535 249 RCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEV 327 (562)
Q Consensus 249 ~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~ 327 (562)
|.+++...+.++..|+++++.. .+++..+++.++++++++++++|.++..++...........++|.+++||++++++.
T Consensus 235 h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~ 314 (576)
T PRK05620 235 HVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPIL 314 (576)
T ss_pred HhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHH
Confidence 9999988888888899888765 579999999999999999999999999887654333344568999999999999999
Q ss_pred HHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeE
Q 008535 328 LEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGE 406 (562)
Q Consensus 328 ~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Ge 406 (562)
.+.|+ .++.++++.||+||++..++........ . ...........|.+.++. .+++++. +..++..+++.||
T Consensus 315 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~---~-~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Ge 387 (576)
T PRK05620 315 IKAWEERYGVDVVHVWGMTETSPVGTVARPPSGV---S-GEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGE 387 (576)
T ss_pred HHHHHHHhCCceeeeccccccccceeeeccCCcc---c-cccccccccccCCcCCce-eEEEecC--CccccCCCCCceE
Confidence 99987 5689999999999998766543311100 0 000001123456655555 6677664 5555544346799
Q ss_pred EEEcchhhhhhhcCCchhh----Hh------------hh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHH
Q 008535 407 VMFRANTVMLGYFKNPKAT----EE------------AF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLE 469 (562)
Q Consensus 407 l~v~~~~~~~gy~~~~~~~----~~------------~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 469 (562)
|+++|+.++.||+++++.+ .. .| .+|||+|||++++++||.+++.||.+|+|+.+|.+++|.+
T Consensus 388 l~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~e 467 (576)
T PRK05620 388 IQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQ 467 (576)
T ss_pred EEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHH
Confidence 9999999999999998776 22 23 3789999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC---CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcch
Q 008535 470 VEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE---ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQ 545 (562)
Q Consensus 470 iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~---~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~ 545 (562)
||..|.++|.|.+++|++.++...++.+++++++.++.. ...++++++++++++.+++|+.+.+++ ||+|++||++
T Consensus 468 IE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~ 547 (576)
T PRK05620 468 LENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFD 547 (576)
T ss_pred HHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCc
Confidence 999999999999999999999988889999988876643 346899999999999999999988655 9999999999
Q ss_pred HHHHhhhhhhh
Q 008535 546 KFVLRGKVNAT 556 (562)
Q Consensus 546 r~~l~~~~~~~ 556 (562)
|++|++++++.
T Consensus 548 r~~L~~~~~~~ 558 (576)
T PRK05620 548 KKDLRQHLADG 558 (576)
T ss_pred HHHHHHHHhcC
Confidence 99999998864
No 61
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=4.4e-65 Score=534.18 Aligned_cols=497 Identities=24% Similarity=0.313 Sum_probs=407.2
Q ss_pred CCCChHHHHHHHHHHcCCceEEEE------CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIY------GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~------~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
.+.|+.+++++.++.+|+++|++. ....+||+||++++.++|.+|.+.|+++||+|+++++|+++++++++||+
T Consensus 20 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~ 99 (538)
T TIGR03208 20 RDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACA 99 (538)
T ss_pred ccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 456899999999999999999986 23689999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH-----HHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE-----VVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
++|++++|+++..+.+++.++++.+++++++++..... .......... ....++..+...
T Consensus 100 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--------- 164 (538)
T TIGR03208 100 RIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP------ALRQVVVIDGDG--------- 164 (538)
T ss_pred hcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC------cceEEEEecCCC---------
Confidence 99999999999999999999999999999999876431 1111111111 012233322111
Q ss_pred cCCCCCCCCchhhhhhccc----Cc---cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCC
Q 008535 167 ANNFPSGSLDYNDLLEMGK----AD---FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMP 239 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~ 239 (562)
...+..++.... .. ........++++++++|||||||.||+|.++|+++..........+++..++
T Consensus 165 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d 237 (538)
T TIGR03208 165 -------DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGD 237 (538)
T ss_pred -------CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCC
Confidence 011111111000 00 0001124568999999999999999999999999998888888888899999
Q ss_pred eeeeecccccchhhH-HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEE
Q 008535 240 VFLWTLDMFRCNGWC-CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVI 318 (562)
Q Consensus 240 ~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~ 318 (562)
++++.+|++|..++. .++.++..|+++++.+.+++..+++.+++++++++.++|.++..+..........++++|.+++
T Consensus 238 ~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 317 (538)
T TIGR03208 238 VILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLC 317 (538)
T ss_pred eEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEE
Confidence 999999999998865 4677788899888888889999999999999999999999999988765444456789999999
Q ss_pred eCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccc
Q 008535 319 AGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSV 397 (562)
Q Consensus 319 ~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 397 (562)
||++++++..+++. .++.++++.||+||++++.+...... .......+|.+.++. .+++++. ++.++
T Consensus 318 gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~~G~~~~g~-~v~i~~~-~~~~~ 385 (538)
T TIGR03208 318 AGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA----------LEKASTTDGRPLPGV-EVKVIDA-NGAKL 385 (538)
T ss_pred cCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc----------hhhccCcccccCCCC-EEEEECC-CCCCC
Confidence 99999999999887 57899999999999987654432110 011123567777776 7888875 56666
Q ss_pred cCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 398 PHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 398 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
+.+ +.|||+++|+.++.||+++++.+.. ..+|||+|||+|++|++|.+++.||.+|+|+.+|.+|+|.+||++|.++
T Consensus 386 ~~g--~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~ 462 (538)
T TIGR03208 386 SQG--ETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQH 462 (538)
T ss_pred cCC--CCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcC
Confidence 655 6799999999999999999877653 3589999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhc-cCCCCCCCcEEEeec-ccCCCCCcchHHHHhh
Q 008535 478 PKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGD-ELPSCMVPRAIFFED-IPVNSTGKVQKFVLRG 551 (562)
Q Consensus 478 ~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~ 551 (562)
++|.+++|++.++...++.+.+++++.++...+.+++.+++++ +++.+++|..+.+++ +|+|++||++|++|++
T Consensus 463 ~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~~ 538 (538)
T TIGR03208 463 PAVAQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLRE 538 (538)
T ss_pred cceeeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhcC
Confidence 9999999999998888899999999887766788899999985 799999999888655 9999999999999863
No 62
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=7.1e-65 Score=530.84 Aligned_cols=499 Identities=24% Similarity=0.369 Sum_probs=407.0
Q ss_pred CChHHHHHHHHHHcCCceEEEECC-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGT-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
.|+.+++++.++++|+++|+.+.+ +.+||.||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 489999999999999999998754 689999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGS 174 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
++++++++..+.+++.++++.++++.++++.+....+.+........ ...++....... ...+.
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-----------~~~~~ 150 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATP-----LRHICLTRVALP-----------ADDGV 150 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcccc-----CcEEEEecCCCc-----------ccccc
Confidence 99999999999999999999999999999988776665543322111 222222222110 00122
Q ss_pred CchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhH
Q 008535 175 LDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWC 254 (562)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~ 254 (562)
.++.+.............+..++++++++|||||||.||+|.+||.++............+..++++++.+|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 33444333322221222234568999999999999999999999999876554443444678899999999999987655
Q ss_pred -HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-
Q 008535 255 -CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA- 332 (562)
Q Consensus 255 -~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~- 332 (562)
..+.++..|+++++.+.+++..+++.+++++++++.++|.+++.++............++.+++++ .++++....|.
T Consensus 231 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 309 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEE 309 (517)
T ss_pred HHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHH
Confidence 456677788888888889999999999999999999999999999876544434456788777765 67777777776
Q ss_pred hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc-
Q 008535 333 NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA- 411 (562)
Q Consensus 333 ~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~- 411 (562)
.++.++++.||+||+++.++...... ......+|.+.++. .+++++. ++.+++.+ +.|||+++|
T Consensus 310 ~~~~~~~~~YG~tE~~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~ 374 (517)
T PRK08008 310 RFGVRLLTSYGMTETIVGIIGDRPGD-----------KRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGV 374 (517)
T ss_pred HhCCeEEeeccccccccccccCCccc-----------cccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCC
Confidence 56999999999999976555432110 11224577777776 8888885 67777765 679999998
Q ss_pred --hhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 412 --NTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 412 --~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
+.++.||+++++.+.+.|. +|||+|||+|++|++|.+++.||.+|+||.+|++++|.+||+++.+++.|.+++|++.
T Consensus 375 ~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~ 454 (517)
T PRK08008 375 PGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGI 454 (517)
T ss_pred CCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEcc
Confidence 5899999999999998885 8999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 489 VDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
+++..++.+.++|++.++...+.++++++++++++++++|..+++++ ||+|++||++|+.|+
T Consensus 455 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 455 KDSIRDEAIKAFVVLNEGETLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCCCCceEEEEEEECCCCCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 99888889999999988766778899999999999999999888655 999999999999875
No 63
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=5.8e-65 Score=530.18 Aligned_cols=495 Identities=24% Similarity=0.320 Sum_probs=416.0
Q ss_pred CChHHHHHHHHHHcCCceEEEE-CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIY-GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
.++.+++.+++ .+|+++|+.+ .+..+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v 81 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFL 81 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEE
Confidence 48899999999 9999999987 567899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|+++..+.+++..+++.+++++++++....+.+........ ...++.++.... ..+.
T Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------------~~~~ 138 (504)
T PRK07514 82 PLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAG-------APHVETLDADGT----------------GSLL 138 (504)
T ss_pred ECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccC-------CceEEEecCCCc----------------ccHH
Confidence 99999999999999999999999999877665544322111 111222221110 0111
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-HH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-TW 257 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~~ 257 (562)
+........ .......++++++++|||||||.||+|.+||+++...+......+++..+|++++..|++|..++.. .+
T Consensus 139 ~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 217 (504)
T PRK07514 139 EAAAAAPDD-FETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATN 217 (504)
T ss_pred HhhhhcCcc-cCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHH
Confidence 111111111 1112345789999999999999999999999999988888778888999999999999999999764 56
Q ss_pred HhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcCC
Q 008535 258 AMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFGF 336 (562)
Q Consensus 258 ~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~ 336 (562)
.++..|+++++.+..++..+++.+ .+++++.++|.++..++.........++++|.+++||+++++++.+.|. .++.
T Consensus 218 ~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 295 (504)
T PRK07514 218 VALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGH 295 (504)
T ss_pred HHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCC
Confidence 678889999988888999999999 4799999999999999887665566788999999999999999999988 5688
Q ss_pred eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh
Q 008535 337 NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML 416 (562)
Q Consensus 337 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 416 (562)
++++.||+||++....... .........|.|.++. .+++.+++++.+++.+ +.|||+++|+.++.
T Consensus 296 ~~~~~YG~tE~~~~~~~~~------------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~ 360 (504)
T PRK07514 296 AILERYGMTETNMNTSNPY------------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFK 360 (504)
T ss_pred cceeecccccccccccCCc------------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCccc
Confidence 9999999999875443211 0111234567777776 8888886678887766 67999999999999
Q ss_pred hhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCc
Q 008535 417 GYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKE 495 (562)
Q Consensus 417 gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 495 (562)
||+++++.+...|. +|||+|||+++++++|.+++.||.||+||++|.+++|.+||+++.++++|.+++|++.++...++
T Consensus 361 gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 440 (504)
T PRK07514 361 GYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGE 440 (504)
T ss_pred cccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCc
Confidence 99999999988886 88999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 496 VPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 496 ~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
.++++++..++...+.++++++++++++++++|..+.+++ +|+|++||++|++|++.|.+.
T Consensus 441 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 441 GVTAVVVPKPGAALDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 8999999887766788999999999999999999887655 999999999999999988753
No 64
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.9e-64 Score=528.02 Aligned_cols=499 Identities=24% Similarity=0.314 Sum_probs=415.4
Q ss_pred ChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec
Q 008535 21 TPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL 100 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (562)
++.++|++.++.+|+++|+.+.++++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhh
Q 008535 101 NTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDL 180 (562)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
++..+.+++..+++.+++++++++....+.+........ ....++.+++..... ........|.++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 146 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH------DLRTLILVGEPAHAS--------EGGGESPSWPKL 146 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc------ccceEEEecCccccc--------CCccccccHHHh
Confidence 999999999999999999999998876655544332211 022333333222110 001122344444
Q ss_pred hhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhH
Q 008535 181 LEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMA 260 (562)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~ 260 (562)
....... ...+...+++++++|||||||.||+|.+||+++..+.......+++..+|++++.+|++|.+++..++.++
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l 224 (515)
T TIGR03098 147 LALGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAF 224 (515)
T ss_pred hcccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHH
Confidence 3322211 11223457899999999999999999999999998888888888899999999999999999999889999
Q ss_pred hhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c-CCee
Q 008535 261 AVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F-GFNI 338 (562)
Q Consensus 261 ~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~-~~~l 338 (562)
..|+++++.+.+++..+++.++++++|++.++|.++..|.+... ....++++|.++++|+++++++.+.+++ + +..+
T Consensus 225 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~ 303 (515)
T TIGR03098 225 YVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARL 303 (515)
T ss_pred HcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeE
Confidence 99999998888999999999999999999999999999986532 2245778999999999999999999984 4 6789
Q ss_pred eccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhh
Q 008535 339 RHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGY 418 (562)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 418 (562)
++.||+||++....... .........+|.+.++. .+++.+. ++..++.+ +.|||+++|+.++.||
T Consensus 304 ~~~YG~tE~~~~~~~~~-----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy 368 (515)
T TIGR03098 304 FLMYGLTEAFRSTYLPP-----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGY 368 (515)
T ss_pred eeeeccccccceEeccc-----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccc
Confidence 99999999875433211 01112235677777777 7888875 56666554 6799999999999999
Q ss_pred cCCchhhHhhhc------------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 419 FKNPKATEEAFR------------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 419 ~~~~~~~~~~~~------------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
++++..+...|. ++||+|||+|++|++|.+++.||.+|+|+.+|.+++|.+||+++.++|.|.+++|+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 448 (515)
T TIGR03098 369 WNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAF 448 (515)
T ss_pred cCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEE
Confidence 999988877663 24899999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhh
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRG 551 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~ 551 (562)
+.+++..++.++++++..+....+.++++++++++++++++|..+++++ ||+|++||++|++|++
T Consensus 449 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 449 GVPDPTLGQAIVLVVTPPGGEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999988999999998766666788999999999999999999988655 9999999999999975
No 65
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.3e-64 Score=529.69 Aligned_cols=499 Identities=24% Similarity=0.360 Sum_probs=407.7
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
...++.++|+++++ |+++|+++.++++||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 23 ~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 23 QDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred cCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 34589999999887 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccch-----HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFV-----EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
+++.+.....++..+++.+++++++++.... ............ ...++.... .
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~----------------~ 158 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSS------LRVVLLLND----------------D 158 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCC------ceEEEEecC----------------C
Confidence 8777777788899999999999999986531 111111111110 111211111 0
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchh
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 252 (562)
+...+.+++....... ...+..++++++++|||||||.||+|++||+++..........+++..++++++.+|++|.++
T Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 237 (536)
T PRK10946 159 GEHSLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYP 237 (536)
T ss_pred CCccHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCcccccc
Confidence 1123333333322111 112345689999999999999999999999999999888888889999999999999999988
Q ss_pred hH--HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcc--ccccccccceEEEEEeCCCChHHHH
Q 008535 253 WC--CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANAS--ASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 253 l~--~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
+. ..+.++..|+++++.+.+++..+++++++++++++.++|..++.|+... ......+++++.+++||+++++++.
T Consensus 238 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~ 317 (536)
T PRK10946 238 MSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLA 317 (536)
T ss_pred chhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHH
Confidence 76 3677788899998888889999999999999999999999999998763 2233457889999999999999999
Q ss_pred HHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 329 EQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 329 ~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
+.+. .+++++++.||+||+....... .. ........+|.|..+...+++.+. ++++++.| +.|||
T Consensus 318 ~~~~~~~g~~~~~~YG~tE~~~~~~~~--~~---------~~~~~~~~~G~p~~~~~~v~i~d~-~~~~~~~g--~~Gel 383 (536)
T PRK10946 318 RRIPAELGCQLQQVFGMAEGLVNYTRL--DD---------SDERIFTTQGRPMSPDDEVWVADA-DGNPLPQG--EVGRL 383 (536)
T ss_pred HHHHHhcCCeEEEeecccccceeeecC--CC---------ccccccccCCcccCCCceEEEECC-CCCCCCCC--CccEE
Confidence 9987 5699999999999964332211 00 001112356666633337777775 56777665 78999
Q ss_pred EEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 408 MFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
+++|+.++.||+++++.+...|. +|||+|||+|++|++|.+++.||.+|+|+++|.+++|.+||+.|.++++|.+++|+
T Consensus 384 ~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 463 (536)
T PRK10946 384 MTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALV 463 (536)
T ss_pred EEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEE
Confidence 99999999999999999988884 89999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhhc
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
+.+++..++.+++++++.++ .+.+++++++++. ++.|++|..+.+. ++|+|++||++|++|++.+...+
T Consensus 464 ~~~~~~~g~~~~a~vv~~~~--~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 464 SMEDELMGEKSCAFLVVKEP--LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred cCCCcccCceEEEEEEeCCC--CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 99999888999999987654 6788999999886 9999999988855 59999999999999999887654
No 66
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.3e-65 Score=546.68 Aligned_cols=514 Identities=21% Similarity=0.239 Sum_probs=390.7
Q ss_pred CChHHHHHHHHHHcCCceEEEEC------------C-----------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIYG------------T-----------VRFSWRQTHQICLKLASALAQLKISRGDIVAAM 76 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~ 76 (562)
.|+.++|++.++.+|+++|+... + ..+||+||.+++.++|++|.+.|+++||+|+++
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 58999999999999999999431 1 238999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCC
Q 008535 77 APNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPEC 156 (562)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (562)
++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+......+.. ...++.+++.
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~------l~~ii~~~~~ 211 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET------VKRVIYMDDE 211 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC------ceEEEEECCC
Confidence 9999999999999999999999999999999999999999999999998766665544332211 3455555432
Q ss_pred CCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc-CC
Q 008535 157 DHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC-DV 235 (562)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~ 235 (562)
....... ..........++.++...+........+..++|+++|+|||||||.||||++||+++.++.......+ .+
T Consensus 212 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~ 289 (696)
T PLN02387 212 GVDSDSS--LSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKL 289 (696)
T ss_pred Cchhhhh--hhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCC
Confidence 2110000 00000111234555554432222122234678999999999999999999999999988877765554 57
Q ss_pred CCCCeeeeecccccchhhHHHHHhHhhceEEEEeccC------C--HHHHHHHHHhcCeEEEEcchHHHHHHHhcccccc
Q 008535 236 RDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTV------S--AKIIFDSILIHKVTHLCGQPRILNMIANASASDQ 307 (562)
Q Consensus 236 ~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~------~--~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 307 (562)
.++|++++.+|++|.+++...+.++..|+++...... + +..++..+++++||+++++|.+++.|.+......
T Consensus 290 ~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~ 369 (696)
T PLN02387 290 GKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKV 369 (696)
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHH
Confidence 8899999999999999988766667777766553221 1 2345678999999999999999999875321000
Q ss_pred ----------------------------------------------ccc-cceEEEEEeCCCChHHHHHHHH-hcCCeee
Q 008535 308 ----------------------------------------------NQL-QRKVIIVIAGVLPTIEVLEQVA-NFGFNIR 339 (562)
Q Consensus 308 ----------------------------------------------~~l-~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~ 339 (562)
..+ +++|.+++||+++++++.+.++ .+|++++
T Consensus 370 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~ 449 (696)
T PLN02387 370 DAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIG 449 (696)
T ss_pred hcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCee
Confidence 001 5899999999999999988887 4799999
Q ss_pred ccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCccccc-CCCCceeEEEEcchhhhhhh
Q 008535 340 HAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVP-HDGKTLGEVMFRANTVMLGY 418 (562)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~-~~~~~~Gel~v~~~~~~~gy 418 (562)
+.||+||+++.++..... ......+|.|.++. .++|++.+++.... ...+..|||+|+||+++.||
T Consensus 450 ~~YG~TEt~~~~~~~~~~------------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY 516 (696)
T PLN02387 450 QGYGLTETCAGATFSEWD------------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGY 516 (696)
T ss_pred EeechhhcccceeecCcc------------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchh
Confidence 999999998665543211 11234678888777 88888743433221 11223599999999999999
Q ss_pred cCCchhhHhhhc---cc--eeeeCceeEEcCCCcEEEeccccceeec-CCeEechHHHHHHHhcCCCceeEEEEeeeCCC
Q 008535 419 FKNPKATEEAFR---NG--WYHTGDLAVRNPDGYVQMKDRRKDIIIS-GAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQ 492 (562)
Q Consensus 419 ~~~~~~~~~~~~---~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 492 (562)
|++|+.|.+.|. +| ||+|||+|++|+||++++.||.+|+||. +|++|+|.+||++|.++|.|.+++|++.+..
T Consensus 517 ~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~- 595 (696)
T PLN02387 517 FKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH- 595 (696)
T ss_pred cCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc-
Confidence 999999999983 35 9999999999999999999999999996 6999999999999999999999999986532
Q ss_pred CCceeEEEEEeCCCC--------C---CC----------HHHHHHHH-----hccCCCCCCCcEEEeeccc-------CC
Q 008535 493 LKEVPVAFVKLKEGR--------E---AS----------PEELVTFC-----GDELPSCMVPRAIFFEDIP-------VN 539 (562)
Q Consensus 493 ~~~~~v~~v~~~~~~--------~---~~----------~~~l~~~~-----~~~l~~~~~p~~i~~~~lP-------~t 539 (562)
..++++|++++.. . .+ .+++.+.+ +.+|..+.+|+.+.+.+-| +|
T Consensus 596 --~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT 673 (696)
T PLN02387 596 --SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVT 673 (696)
T ss_pred --ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCC
Confidence 3478888875421 0 01 11222222 3468999999999876622 78
Q ss_pred CCCcchHHHHhhhhhhhc
Q 008535 540 STGKVQKFVLRGKVNATA 557 (562)
Q Consensus 540 ~~GKv~r~~l~~~~~~~~ 557 (562)
++.|+.|..+++.|.+.-
T Consensus 674 ~t~K~~R~~i~~~y~~~i 691 (696)
T PLN02387 674 AALKLKREQIRKKFKDDL 691 (696)
T ss_pred hhhhhhhHHHHHHHHHHH
Confidence 999999999999998764
No 67
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-64 Score=531.08 Aligned_cols=524 Identities=23% Similarity=0.280 Sum_probs=416.1
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
...++.++|+++++.+|+++|+.+.++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 31 ~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 110 (567)
T PRK06178 31 GERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVH 110 (567)
T ss_pred CcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC-cccccCCC---CCC
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS-TCSVANNF---PSG 173 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~ 173 (562)
+|++|..+.+++.++++.++++++++++...+.+........ ...++........... ........ ...
T Consensus 111 v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (567)
T PRK06178 111 VPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETS-------LRHVIVTSLADVLPAEPTLPLPDSLRAPRLA 183 (567)
T ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCC-------cceEEEecccccccccccccccccccccccc
Confidence 999999999999999999999999999887776655433221 1122211111100000 00000000 000
Q ss_pred CCchhhhhhcccC--ccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh-hcCCCCCCeeeeecccccc
Q 008535 174 SLDYNDLLEMGKA--DFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS-RCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 174 ~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~l~~~pl~~~ 250 (562)
...+.++.+.... ......+..++++++++|||||||.||+|.+||+++......... .......+++++.+|++|.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 263 (567)
T PRK06178 184 AAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWI 263 (567)
T ss_pred ccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHH
Confidence 0111122211110 111112345689999999999999999999999998876555433 3567889999999999999
Q ss_pred hhhH-HHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEe--CCCChHHH
Q 008535 251 NGWC-CTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIA--GVLPTIEV 327 (562)
Q Consensus 251 ~gl~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~--g~~l~~~~ 327 (562)
+|+. .++.++..|+++++.+.+++..++..+++++++.+..+|..+..+..........+++++.+..+ ++.++++.
T Consensus 264 ~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 343 (567)
T PRK06178 264 AGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDY 343 (567)
T ss_pred HHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHH
Confidence 9985 56777889999999888999999999999999999999999999887654444566778876544 58899999
Q ss_pred HHHHHh-cCCeee-ccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCcee
Q 008535 328 LEQVAN-FGFNIR-HAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLG 405 (562)
Q Consensus 328 ~~~~~~-~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~G 405 (562)
.+.+++ ++..++ +.||+||+++.+.........+ ......+..+|.|.++. .+++.+.+++..++.+ +.|
T Consensus 344 ~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~G 415 (567)
T PRK06178 344 RQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD-----FDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEG 415 (567)
T ss_pred HHHHHHHhCCcccccccccccccccceeccccccCc-----cccccCCcccccccCCc-EEEEEcCCCCCcCCCC--Cce
Confidence 999884 576666 4799999876544332111100 00012234578888877 8888887678888766 679
Q ss_pred EEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 406 EVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 406 el~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
||+++|++++.||+++++.+...|.+|||+|||+|+++++|++++.||.+|+|+.+|.+++|.+||+.+.++++|.++++
T Consensus 416 el~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v 495 (567)
T PRK06178 416 EIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAV 495 (567)
T ss_pred EEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEE
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeecccCCCCCcchHHHHhhhhhhh
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFEDIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
++.+++..++.++++|++.++...+.+++.++++++++.+++|..+++.++|+|++||++|++|++++++.
T Consensus 496 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 496 VGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCRENMAVYKVPEIRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred EcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCceEEEeccCCCCCccceeHHHHHHHHHhh
Confidence 99988888889999999887666788999999999999999997444556999999999999999998764
No 68
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-64 Score=525.29 Aligned_cols=477 Identities=25% Similarity=0.329 Sum_probs=395.7
Q ss_pred HHHHHHcCCceEEEE--CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCC
Q 008535 27 ERAAHVYGDATSIIY--GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRL 104 (562)
Q Consensus 27 ~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 104 (562)
+.+++.+|+++|+.+ .+..+||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcc
Q 008535 105 DSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMG 184 (562)
Q Consensus 105 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (562)
+.+++..+++.++++++++++..... ....+ .+..+....
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~----------------~~~~~------------------------~~~~~~~~~ 121 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG----------------RTDVE------------------------DLAAFIASA 121 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc----------------ccccc------------------------chhhhhhhc
Confidence 99999999999999999998653220 00000 000010000
Q ss_pred cCc-cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHH-HHhHhh
Q 008535 185 KAD-FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCT-WAMAAV 262 (562)
Q Consensus 185 ~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~-~~~~~~ 262 (562)
... .........+++++++|||||||.||+|.++|+++............+...|++++.+|++|.+++... ..++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~ 201 (488)
T PRK09088 122 DALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAV 201 (488)
T ss_pred cccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhc
Confidence 000 000112345789999999999999999999999998877777777778899999999999999998764 455666
Q ss_pred ceEEEEeccCCHHHHHHHHH--hcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeeec
Q 008535 263 GGINVCIRTVSAKIIFDSIL--IHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIRH 340 (562)
Q Consensus 263 g~~~v~~~~~~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~ 340 (562)
|+++++.+.+++..++..+. ++++|+++++|.+++.+.+........+++++.+++||++++.+..+.+.+.++++++
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~ 281 (488)
T PRK09088 202 GGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVD 281 (488)
T ss_pred CCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceee
Confidence 77777777788999998886 4899999999999999987665555667899999999999999888887766899999
Q ss_pred cccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcC
Q 008535 341 AYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFK 420 (562)
Q Consensus 341 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 420 (562)
.||+||++++......+. ........+|.+.++. .++|.+. ++.+++.+ +.|||+++|++++.||++
T Consensus 282 ~YG~TE~~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~ 348 (488)
T PRK09088 282 GFGMSEAGTVFGMSVDCD---------VIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWR 348 (488)
T ss_pred eecccccccccccCCCcc---------cccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcC
Confidence 999999986543221110 0011224567777777 7888875 56666655 679999999999999999
Q ss_pred CchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEE
Q 008535 421 NPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVA 499 (562)
Q Consensus 421 ~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~ 499 (562)
+++.+.+.|. +|||+|||+|++|++|.+++.||.+|+|+.+|.+++|.+||++|..++.|.+++|++.+++..++..++
T Consensus 349 ~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 428 (488)
T PRK09088 349 RPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYL 428 (488)
T ss_pred ChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEE
Confidence 9998888774 899999999999999999999999999999999999999999999999999999999998877888889
Q ss_pred EEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 500 FVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 500 ~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
++++.+....+.+++.++++++++++++|..+.+++ ||+|++||++|++|++++.+.
T Consensus 429 ~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 429 AIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 998877666678899999999999999999888655 999999999999999988764
No 69
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-64 Score=532.58 Aligned_cols=518 Identities=25% Similarity=0.328 Sum_probs=412.1
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
.++.+++.+.++.+|+++|+++.++++||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCC-CCCCcccc-------cCC--
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDH-YQPSTCSV-------ANN-- 169 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~-- 169 (562)
++|..+.+++.++++.+++++++++......+........ ...++....... ..+..... .+.
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATK-------IEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhc-------cceeEEeccccccccccccccchhhcccccccc
Confidence 9999999999999999999999998865443332211100 111111100000 00000000 000
Q ss_pred --CCCC-CCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh-hcCCC-CCCeeeee
Q 008535 170 --FPSG-SLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS-RCDVR-DMPVFLWT 244 (562)
Q Consensus 170 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~-~~~~~-~~~~~l~~ 244 (562)
.... ...+..+....... ........+++++++|||||||.||+|.++|+++..+...... .+... ..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 255 (563)
T PRK06710 177 KVSESETIHLWNSVEKEVNTG-VEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGV 255 (563)
T ss_pred cccccchhhhhhhhhhccccc-cccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEe
Confidence 0000 00111111111100 0011123478999999999999999999999998755443332 23333 34578999
Q ss_pred cccccchhhHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCC
Q 008535 245 LDMFRCNGWCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLP 323 (562)
Q Consensus 245 ~pl~~~~gl~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l 323 (562)
.|++|.+++.. .+.++..|+++++.+.+++..+++.++++++|++.++|+++..++.........++++|.+++||+++
T Consensus 256 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~ 335 (563)
T PRK06710 256 LPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPL 335 (563)
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcC
Confidence 99999998764 44567788888888888999999999999999999999999999886655555678999999999999
Q ss_pred hHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCC
Q 008535 324 TIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGK 402 (562)
Q Consensus 324 ~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 402 (562)
+++..++++ .++.++++.||+||+++.+...... ........|.+.++. .+++++.+++..++.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g-- 401 (563)
T PRK06710 336 PVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW-----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG-- 401 (563)
T ss_pred CHHHHHHHHHhhCCCEecccccccCccccccCccc-----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC--
Confidence 999999988 4688999999999998754432110 011123567777776 7888887778877776
Q ss_pred ceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCcee
Q 008535 403 TLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLE 482 (562)
Q Consensus 403 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 482 (562)
+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.||+|+++|.+|+|.+||+.|.+++.|.+
T Consensus 402 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~ 481 (563)
T PRK06710 402 EIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQE 481 (563)
T ss_pred CceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceee
Confidence 67999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhccc
Q 008535 483 AAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAVG 559 (562)
Q Consensus 483 ~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~~ 559 (562)
++|++.+++..++.++++++..++...+.++++++++++++.+++|..+.+++ ||+|++||++|+.|++.+..+-++
T Consensus 482 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 482 VVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred EEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 99999999888899999999887766778899999999999999999888665 999999999999999998876654
No 70
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5e-65 Score=540.32 Aligned_cols=505 Identities=21% Similarity=0.265 Sum_probs=394.1
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC---------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT---------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHF 88 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 88 (562)
+.+|+.++++++++.+|+++|+++.+ ..+||+||.+++.++|++|.+. +++||+|+++++|+++++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 34689999999999999999998631 4799999999999999999986 9999999999999999999999
Q ss_pred HhhhccceEEec-CCCCC--HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccc
Q 008535 89 AVPMAGAVLSAL-NTRLD--SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCS 165 (562)
Q Consensus 89 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (562)
||+++|++++|+ ++.++ .+++.++++.+++++++++....+.+......+.... ...++.+++...
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~------- 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLR----RPRVIAIDAIPD------- 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhccccc----CceEEEeccccc-------
Confidence 999999999999 57766 7899999999999999999876665544332221000 122222221000
Q ss_pred ccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC-CCCCCeeeee
Q 008535 166 VANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD-VRDMPVFLWT 244 (562)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~l~~ 244 (562)
...... ...+..++++++|+|||||||.||||.++|+++..+.......++ +.+++++++.
T Consensus 180 -----------------~~~~~~-~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~ 241 (612)
T PRK12476 180 -----------------SAGESF-VPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSW 241 (612)
T ss_pred -----------------cccccc-cCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEe
Confidence 000000 011235679999999999999999999999999887776666677 7888999999
Q ss_pred cccccchhhHHHHHhHhhceEEEEecc--C--CHHHHHHHHH--hcCeEEEEcchHHHHHHHhccc----cccccccceE
Q 008535 245 LDMFRCNGWCCTWAMAAVGGINVCIRT--V--SAKIIFDSIL--IHKVTHLCGQPRILNMIANASA----SDQNQLQRKV 314 (562)
Q Consensus 245 ~pl~~~~gl~~~~~~~~~g~~~v~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~----~~~~~l~~l~ 314 (562)
+|++|.+|+...+.+++.|++.++..+ + ++..+++.++ +++++.++.+|.++..++.... ....+++++|
T Consensus 242 ~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr 321 (612)
T PRK12476 242 LPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV 321 (612)
T ss_pred CCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe
Confidence 999999999877777777877777653 3 8899999995 5899999999999888766421 1234678899
Q ss_pred EEEEeCCCChHHHHHHHHh-c---CC---eeeccccCccccCcccccccCCCC-----CC--------CcCCcc--cccc
Q 008535 315 IIVIAGVLPTIEVLEQVAN-F---GF---NIRHAYGMTEVLGPAIVRQWKPEG-----ES--------SALDHE--HEMT 372 (562)
Q Consensus 315 ~i~~~g~~l~~~~~~~~~~-~---~~---~l~~~YG~tE~~~~~~~~~~~~~~-----~~--------~~~~~~--~~~~ 372 (562)
+++||++++++..+.|.+ + |+ ++++.||+||++..++........ +. ..+... ....
T Consensus 322 -~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 400 (612)
T PRK12476 322 -LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVA 400 (612)
T ss_pred -EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcce
Confidence 999999999999988874 3 43 489999999987554332111000 00 000000 0011
Q ss_pred ccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc-------------------cce
Q 008535 373 KHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-------------------NGW 433 (562)
Q Consensus 373 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------~g~ 433 (562)
...+|.+.++. .++|++.+++.+++.+ +.|||+++|++++.||+++++.+.+.|. ++|
T Consensus 401 ~~~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w 477 (612)
T PRK12476 401 HVSCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTW 477 (612)
T ss_pred eEeCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCe
Confidence 23678888887 8888887658888766 7899999999999999999999998884 259
Q ss_pred eeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhc-CCCcee--EEEEeeeCCCCCceeEEEEEeCCCCC-C
Q 008535 434 YHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLS-NPKVLE--AAVVGKVDDQLKEVPVAFVKLKEGRE-A 509 (562)
Q Consensus 434 ~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~~~~~v~~v~~~~~~~-~ 509 (562)
|+|||+|+++ ||+++|.||.||+||++|++|+|.+||++|.+ +|.|.+ ++|++++++. ++.+++++++.++.. .
T Consensus 478 ~~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~ 555 (612)
T PRK12476 478 LRTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRA 555 (612)
T ss_pred eeccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccc
Confidence 9999999985 99999999999999999999999999999985 799999 7778888776 788999999877643 4
Q ss_pred CHHHHHHHHhccCC-CCCC-CcEEEeec---ccCCCCCcchHHHHhhhhhhhcc
Q 008535 510 SPEELVTFCGDELP-SCMV-PRAIFFED---IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 510 ~~~~l~~~~~~~l~-~~~~-p~~i~~~~---lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
+.+++.+++++++. .+++ |+.+.+++ ||+|++||++|++|+++|.+...
T Consensus 556 ~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~ 609 (612)
T PRK12476 556 DPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRL 609 (612)
T ss_pred cHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCC
Confidence 66788888888877 4777 57776654 99999999999999999877653
No 71
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-64 Score=534.92 Aligned_cols=505 Identities=22% Similarity=0.236 Sum_probs=394.2
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
.+..+.|+.++|.+.++.+|+++|+++.++.+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 32 ~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 32 TPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGS 174 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
++++++++.++.+++.++++.++++++|++.+..+.+......... ...++..+..... ..
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-------------~~ 172 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLAR------PPRLWVAGGDTLD-------------DP 172 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcc------cceEEEecCcccc-------------cc
Confidence 9999999999999999999999999999998877766554332221 1111111111000 00
Q ss_pred Cchhhhhh---cccCc-cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccc
Q 008535 175 LDYNDLLE---MGKAD-FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 175 ~~~~~~~~---~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 250 (562)
..+.++.. ..+.. .........+++++|+|||||||.||||.+||+++..+.......+++.++|++++.+|++|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~ 252 (600)
T PRK08279 173 EGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHN 252 (600)
T ss_pred ccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhh
Confidence 11222221 11110 111122356899999999999999999999999999998888888999999999999999999
Q ss_pred hhhHHHHHh-HhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHH
Q 008535 251 NGWCCTWAM-AAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLE 329 (562)
Q Consensus 251 ~gl~~~~~~-~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~ 329 (562)
+++...+.+ +..|+++++.+.+++..+++.++++++|++..+|.+++.++...........+++.+ +|+.++++..+
T Consensus 253 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~ 330 (600)
T PRK08279 253 TGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWD 330 (600)
T ss_pred hhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHH
Confidence 998865554 556777777778899999999999999999999999999987654443445567654 47778999998
Q ss_pred HHH-hcCC-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCcccc----ccc--------cceecccCCcc
Q 008535 330 QVA-NFGF-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNL----LIQ--------GVDVKQQNTMK 395 (562)
Q Consensus 330 ~~~-~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~--------~~~i~~~~~~~ 395 (562)
.|. .++. .+++.||+||++..+.... . ....+|.+.. +.. +..+.+. ++.
T Consensus 331 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~--------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 394 (600)
T PRK08279 331 EFQQRFGIPRILEFYAASEGNVGFINVF-N--------------FDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDA-DGR 394 (600)
T ss_pred HHHHHhCcceeeeeecccccceeecccC-C--------------CCcccccccccccccceeeeeccCcCceeeCC-CCc
Confidence 887 4565 5999999999875332210 0 0112222222 110 2222222 222
Q ss_pred cccCCCCceeEEE--EcchhhhhhhcCCchhhHhhh-------ccceeeeCceeEEcCCCcEEEeccccceeecCCeEec
Q 008535 396 SVPHDGKTLGEVM--FRANTVMLGYFKNPKATEEAF-------RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIIS 466 (562)
Q Consensus 396 ~~~~~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~~-------~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~ 466 (562)
......++.|||+ +.++.++.|| +++..+...| .++||+|||+|++|+||.+++.||.||+||++|.+|+
T Consensus 395 ~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~ 473 (600)
T PRK08279 395 CIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVA 473 (600)
T ss_pred cccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccC
Confidence 2223334779998 7899999999 8888887765 2579999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCC-CceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcc
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQL-KEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKV 544 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~-~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv 544 (562)
|.+||+.+.++|+|.+++|++++.+.. +...+++++..++...+.++++++++++++.|++|..+++.+ ||+|++||+
T Consensus 474 p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi 553 (600)
T PRK08279 474 TTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKY 553 (600)
T ss_pred HHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhh
Confidence 999999999999999999999886643 444556666665556788999999999999999999988655 999999999
Q ss_pred hHHHHhhhhhhhc
Q 008535 545 QKFVLRGKVNATA 557 (562)
Q Consensus 545 ~r~~l~~~~~~~~ 557 (562)
+|++|++.+.+.+
T Consensus 554 ~r~~L~~~~~~~~ 566 (600)
T PRK08279 554 RKVDLRKEGFDPS 566 (600)
T ss_pred hHHHHhhcCCCcc
Confidence 9999998887764
No 72
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.7e-65 Score=548.40 Aligned_cols=492 Identities=21% Similarity=0.251 Sum_probs=390.5
Q ss_pred CCCChHHHHHHHHHHcCC-ceEEEECC-eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 18 VPLTPIDFLERAAHVYGD-ATSIIYGT-VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~-~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
+..|+.++|+++++.+|+ ++|+.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 456899999999999998 57877643 7899999999999999999987 59999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHH--HHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQN--ALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSG 173 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (562)
+++|+++.++.+++.++++++++++++++.+..+.... ....+. ...++.+++...
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~--------------- 338 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLT-------QVRWVYLEDLKD--------------- 338 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhc-------cccEEEhhhhhh---------------
Confidence 99999999999999999999999999998765432110 000000 011121111000
Q ss_pred CCchhh--hh-hcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccc
Q 008535 174 SLDYND--LL-EMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 174 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 250 (562)
...+.+ .. ...........+..++|+++++|||||||.||||.+||+++..........+++.++|++++.+|++|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~ 418 (718)
T PRK08043 339 DVTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHS 418 (718)
T ss_pred hcchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhh
Confidence 000100 00 000000011122456899999999999999999999999999888877778889999999999999999
Q ss_pred hhhHH-HHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHH
Q 008535 251 NGWCC-TWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 251 ~gl~~-~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
+++.. ++.++..|+++++.+. +++..+++.+.++++|+++++|+++..+.+.. ...+++++|.+++||++++++..
T Consensus 419 ~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~ 496 (718)
T PRK08043 419 FGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTK 496 (718)
T ss_pred hhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHH
Confidence 99864 6677888999887764 57788899999999999999999999886642 23457899999999999999999
Q ss_pred HHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 329 EQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 329 ~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
+.|+ .+++++++.||+||+++.++.... .......+|.|.++. .+++++.+ +. ++.|||
T Consensus 497 ~~~~~~~g~~l~~~YG~TE~~~~~~~~~~------------~~~~~~svG~p~pg~-~~~i~d~~-~~------~~~Gel 556 (718)
T PRK08043 497 QLWQDKFGLRILEGYGVTECAPVVSINVP------------MAAKPGTVGRILPGM-DARLLSVP-GI------EQGGRL 556 (718)
T ss_pred HHHHHHcCCCeecccCcccccceEEecCC------------cccCCCCCCCcCCCC-eeEEecCC-CC------CCceEE
Confidence 9988 569999999999999766543211 011235678887777 77777653 21 144999
Q ss_pred EEcchhhhhhhcCC--chh-------hHh-hhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 408 MFRANTVMLGYFKN--PKA-------TEE-AFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 408 ~v~~~~~~~gy~~~--~~~-------~~~-~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
+++|++++.||+++ ++. +.. .+.+|||+|||+|++|+||.+++.||.+|+||++|++|+|.+||+++.++
T Consensus 557 ~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 557 QLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred EEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 99999999999983 332 111 13479999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 478 PKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 478 ~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
+.+.+++|++.+++..++.+++++. +...+.++++++++++ ++.|++|+.+.+++ ||+|++||++|++|++++.+
T Consensus 637 ~~~~~~avv~~~~~~~ge~~v~~~~---~~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 637 SPDKQHATAIKSDASKGEALVLFTT---DSELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred CccceEEEEEccCCCCCceEEEEEc---CcccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 9888899999988888888887764 3346778999999987 99999999988665 99999999999999998876
Q ss_pred hc
Q 008535 556 TA 557 (562)
Q Consensus 556 ~~ 557 (562)
..
T Consensus 714 ~~ 715 (718)
T PRK08043 714 PE 715 (718)
T ss_pred cc
Confidence 43
No 73
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.5e-64 Score=527.55 Aligned_cols=509 Identities=23% Similarity=0.332 Sum_probs=403.6
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQL-KISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
+++.++|+++++.+|+++|+...+.++||.||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999984 999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCc---------ccc---
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPST---------CSV--- 166 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--- 166 (562)
++++.++.+++.++++++++++++++....+.+........ ....+....... .+.. ...
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 175 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTG-------IEYLIEAKMGDL-LPAAKGWLVNTVVDKVKKM 175 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccC-------ceEEEeechhhc-cccccchhccccccccccc
Confidence 99999999999999999999999998765554433221100 000000000000 0000 000
Q ss_pred -cCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC---------CC
Q 008535 167 -ANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD---------VR 236 (562)
Q Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~---------~~ 236 (562)
......+...+.++............+...+++++|+|||||||.||+|.++|+++..+.......+. +.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 176 VPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred ccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 00000122344444432221111122345679999999999999999999999998777665544432 22
Q ss_pred C-CCeeeeecccccchhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccce
Q 008535 237 D-MPVFLWTLDMFRCNGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRK 313 (562)
Q Consensus 237 ~-~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l 313 (562)
. .+++++.+|++|.+++.. .+..+..|+..+... ..++..+++.++++++|++.++|.++..|+........+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 2 356788999999999864 444456666665543 5688999999999999999999999999988776556678899
Q ss_pred EEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccC
Q 008535 314 VIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQN 392 (562)
Q Consensus 314 ~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~ 392 (562)
|.+++||+++++++.+.|+ .+++++++.||+||++++++.+.... ......+|.|.++. .++|++.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-----------~~~~~~~G~p~~~~-~v~ivd~- 402 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE-----------LARLGTVGIPVPGT-ALKVIDD- 402 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc-----------cccCCccceecCCC-EEEEECC-
Confidence 9999999999999999988 46999999999999987665432111 11124567777776 7888886
Q ss_pred CcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHH
Q 008535 393 TMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVE 471 (562)
Q Consensus 393 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 471 (562)
++.+++.+ +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||
T Consensus 403 ~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE 480 (562)
T PRK12492 403 DGNELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE 480 (562)
T ss_pred CCCCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHH
Confidence 66777665 6799999999999999999999988884 79999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 472 AVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 472 ~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
..|.+++.|.+++|++.++...++.+++++++.+. ....++++++++++++.+++|..+.+.+ ||+|++||++|++|+
T Consensus 481 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~ 559 (562)
T PRK12492 481 DVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELR 559 (562)
T ss_pred HHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHH
Confidence 99999999999999999988888888888886543 3567899999999999999999988655 999999999999998
Q ss_pred hh
Q 008535 551 GK 552 (562)
Q Consensus 551 ~~ 552 (562)
++
T Consensus 560 ~~ 561 (562)
T PRK12492 560 DI 561 (562)
T ss_pred hh
Confidence 75
No 74
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-64 Score=523.32 Aligned_cols=477 Identities=23% Similarity=0.270 Sum_probs=396.9
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
.+.++.+.|.++++.+|+++|+.+.+..+||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 56799999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|+++.++.+++..+++.++++.++++....+.+.... ..++.++... ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------------~~~~~~~~~~-----------------~~~ 163 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD------------DAVAVIDPAT-----------------AGA 163 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh------------cceEEeccch-----------------hhh
Confidence 99999999999999999999999999887655443321 1111111000 000
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHH--HHHHHHHhhcCCCCCCeeeeecccccchhhHH
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAY--LNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC 255 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~--~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~ 255 (562)
. . . ...+...++.++++|||||||.||+|.++|.... .........+++..++++++.+|++|.+|+..
T Consensus 164 -----~-~--~-~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~ 234 (516)
T PRK13383 164 -----E-E--S-GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM 234 (516)
T ss_pred -----h-c--C-CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH
Confidence 0 0 0 0011234567899999999999999999997432 12222334567888999999999999999988
Q ss_pred HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHH-
Q 008535 256 TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVA- 332 (562)
Q Consensus 256 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~- 332 (562)
.+.++..|++++....+++..+++.+++++++.+.++|.++..|...... ....++++|.+++||++++++..+.|.
T Consensus 235 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~ 314 (516)
T PRK13383 235 LMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMD 314 (516)
T ss_pred HHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHH
Confidence 88888899999988889999999999999999999999999999875432 123578899999999999999999988
Q ss_pred hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcch
Q 008535 333 NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRAN 412 (562)
Q Consensus 333 ~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~ 412 (562)
.++..+++.||+||++..+..+... .......+|.+.++. .++|++. ++.+++.+ +.|||+++|+
T Consensus 315 ~~g~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~ 379 (516)
T PRK13383 315 TYGDILYNGYGSTEVGIGALATPAD-----------LRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGE 379 (516)
T ss_pred HcCchhhhcccccccccceeccccc-----------cccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecC
Confidence 5788999999999997654432110 011234577777776 7888875 56666655 6799999999
Q ss_pred hhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCC
Q 008535 413 TVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQ 492 (562)
Q Consensus 413 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 492 (562)
.++.||++.+. ..+.+|||+|||+|++|++|++++.||.+|+||++|.+|+|.+||++|.+++.|.++++++.++..
T Consensus 380 ~~~~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~ 456 (516)
T PRK13383 380 LAGTRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDER 456 (516)
T ss_pred cccccccCCch---hheecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccc
Confidence 99999998754 334689999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 493 LKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 493 ~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
.++.+.++|++.++...+.++++++++++++.+++|..+.+++ ||+|++||++|++|+
T Consensus 457 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 457 FGHRLAAFVVLHPGSGVDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred cCceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 8899999999887766678899999999999999999888655 999999999999885
No 75
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.2e-64 Score=582.74 Aligned_cols=516 Identities=19% Similarity=0.173 Sum_probs=399.8
Q ss_pred CCChHHHHHHHHHHcCCceEEEE---------CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Q 008535 19 PLTPIDFLERAAHVYGDATSIIY---------GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFA 89 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA 89 (562)
..++.++|+++++.+|+++|+++ .++++||+||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 45899999999999999999985 346899999999999999999999999999999999999999999999
Q ss_pred hhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccch---HHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 90 VPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFV---EVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
|+++|++++|++|.++.+++.++++.+++++++++.... ..+.......... ....+.+. +.+.....
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~------ 385 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELEL--RTEIPALA-LQDDGSLV------ 385 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhccccc--ccccceEE-eccccccc------
Confidence 999999999999999999999999999999999876421 1111111000000 00011111 11100000
Q ss_pred cCCCCCCCCchhhhhhccc--CccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeee
Q 008535 167 ANNFPSGSLDYNDLLEMGK--ADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWT 244 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~ 244 (562)
..... ....+...... ..........++++++|+|||||||.||||+++|+++.....+....+++.+.|+++..
T Consensus 386 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~ 462 (1389)
T TIGR03443 386 GGSLE---GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTML 462 (1389)
T ss_pred ccccc---cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 00000 00000000000 00001112356899999999999999999999999999988888888999999999999
Q ss_pred cccccchhhHHHHHhHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCC
Q 008535 245 LDMFRCNGWCCTWAMAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGV 321 (562)
Q Consensus 245 ~pl~~~~gl~~~~~~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~ 321 (562)
.|++|..++..++.+++.|+++++.+. .++..+.+.++++++|+++++|++++.|.... ...++++|.+++||+
T Consensus 463 ~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 463 SGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGD 539 (1389)
T ss_pred cCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecc
Confidence 999999999899999999999988754 36889999999999999999999999987543 245789999999999
Q ss_pred CChHHHHHHHHhc--CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCC-ccccc
Q 008535 322 LPTIEVLEQVANF--GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNT-MKSVP 398 (562)
Q Consensus 322 ~l~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~~ 398 (562)
+++.+..+.+++. ++++++.||+||++..++............ ..........+|.+.++. .+.|++.+. +.+++
T Consensus 540 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~ 617 (1389)
T TIGR03443 540 ILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDST-FLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCG 617 (1389)
T ss_pred cCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccc-hhhcccCcCcCCCccCCC-EEEEECCccCCCcCC
Confidence 9999999888754 789999999999976655433211110000 000001123567776665 677777533 35566
Q ss_pred CCCCceeEEEEcchhhhhhhcCCchhhHhhhc-----------------------------cceeeeCceeEEcCCCcEE
Q 008535 399 HDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-----------------------------NGWYHTGDLAVRNPDGYVQ 449 (562)
Q Consensus 399 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------------------------~g~~~TGD~~~~~~~g~l~ 449 (562)
.| +.|||+|+|++++.||+++|+.|.+.|. ++||+|||+|++++||.++
T Consensus 618 ~G--~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~ 695 (1389)
T TIGR03443 618 VG--EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVE 695 (1389)
T ss_pred CC--CceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEE
Confidence 55 7799999999999999999999998872 5799999999999999999
Q ss_pred EeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC-C--------------------
Q 008535 450 MKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR-E-------------------- 508 (562)
Q Consensus 450 ~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~-~-------------------- 508 (562)
+.||.||+||++|++|+|.+||.+|.++|.|.+++|+..++...++.+++++++.... .
T Consensus 696 ~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1389)
T TIGR03443 696 CCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKG 775 (1389)
T ss_pred EecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999888888788899999876221 0
Q ss_pred -----CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhh
Q 008535 509 -----ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKV 553 (562)
Q Consensus 509 -----~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~ 553 (562)
...+++++++++++|.|++|..+.+.+ ||+|++||++|++|+..+
T Consensus 776 ~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 776 LIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred hhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 014678999999999999999887654 999999999999997543
No 76
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.7e-65 Score=529.74 Aligned_cols=487 Identities=19% Similarity=0.196 Sum_probs=374.6
Q ss_pred hHHHHHHHHHHcCCceEEEECC----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 22 PIDFLERAAHVYGDATSIIYGT----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 22 i~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
+.+.|+++++.+|+++|+.+.+ +++||+||.++++++|+.|.+. ++||+|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 7889999999999999999876 7899999999999999999988 899999999999999999999999999986
Q ss_pred EecCC-------CCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 98 SALNT-------RLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 98 v~l~~-------~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
++++. ....+++.++++.+++++++++....+.+...... +.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-------------~~~~~~~------------- 135 (525)
T PRK05851 82 SILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-------------VTVHDLA------------- 135 (525)
T ss_pred cCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-------------ccccccc-------------
Confidence 54431 12234556778999999999987655443321110 0000000
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCC-CCCeeeeeccccc
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVR-DMPVFLWTLDMFR 249 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~l~~~pl~~ 249 (562)
..... .... ...+..++++++|+|||||||.||||.+||+++..........+++. .+|+++..+|++|
T Consensus 136 --------~~~~~-~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 205 (525)
T PRK05851 136 --------TAAHT-NRSA-SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYH 205 (525)
T ss_pred --------ccccc-cccc-cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCcc
Confidence 00000 0000 00123567999999999999999999999999999888888888888 8999999999999
Q ss_pred chhhHHHHHhHhhceEEEEecc--C--CHHHHHHHHHhcCeEEEEcchHHHHHHHhccc-cccccccceEEEEEeCCCCh
Q 008535 250 CNGWCCTWAMAAVGGINVCIRT--V--SAKIIFDSILIHKVTHLCGQPRILNMIANASA-SDQNQLQRKVIIVIAGVLPT 324 (562)
Q Consensus 250 ~~gl~~~~~~~~~g~~~v~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-~~~~~l~~l~~i~~~g~~l~ 324 (562)
.+++...+.+++.|+++++.+. + ++..+++.+.+++++++..+|.++..+..... .....++++|.+++||++++
T Consensus 206 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~ 285 (525)
T PRK05851 206 DMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVD 285 (525)
T ss_pred CccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCC
Confidence 9999888888999999988763 3 67889999999999988665555555543321 22345789999999999999
Q ss_pred HHHHHHHHh----cCC---eeeccccCccccCcccccccCCCCCCCcC---CccccccccccCccccccccceecccCCc
Q 008535 325 IEVLEQVAN----FGF---NIRHAYGMTEVLGPAIVRQWKPEGESSAL---DHEHEMTKHREGLNNLLIQGVDVKQQNTM 394 (562)
Q Consensus 325 ~~~~~~~~~----~~~---~l~~~YG~tE~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~i~~~~~~ 394 (562)
++..+.|.+ +|+ ++++.||+||++..++............. ..........+|.|.++. .++|++.+..
T Consensus 286 ~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~ 364 (525)
T PRK05851 286 CDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGA 364 (525)
T ss_pred HHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCC
Confidence 998888763 354 49999999999765443211100000000 000111234678888877 7888876544
Q ss_pred ccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHH
Q 008535 395 KSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVL 474 (562)
Q Consensus 395 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 474 (562)
.+++.+ +.|||+++|++++.||++++..+ .+|||+|||+|+++ +|.++++||.||+||++|++|+|.+||++|
T Consensus 365 ~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l 437 (525)
T PRK05851 365 AGVAGR--EIGEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVA 437 (525)
T ss_pred ccCCCC--CeEEEEEecCchhhccccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHH
Confidence 456655 77999999999999999988643 37899999999997 799999999999999999999999999999
Q ss_pred hcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCC--CCCcEEEee---cccCCCCCcchHHHH
Q 008535 475 LSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSC--MVPRAIFFE---DIPVNSTGKVQKFVL 549 (562)
Q Consensus 475 ~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~~---~lP~t~~GKv~r~~l 549 (562)
.++|.|.+++|++++++..++.+.++++... ...+.+++.++++++++.+ ++|+.+.++ +||+|++||++|++|
T Consensus 438 ~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L 516 (525)
T PRK05851 438 AQVRGVREGAVVAVGTGEGSARPGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAV 516 (525)
T ss_pred HhCCCcccceEEEEEecCCCCceeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHH
Confidence 9999999999999998888877766665432 1234566777777777766 899988866 499999999999999
Q ss_pred hhhhhh
Q 008535 550 RGKVNA 555 (562)
Q Consensus 550 ~~~~~~ 555 (562)
++.+++
T Consensus 517 ~~~~~~ 522 (525)
T PRK05851 517 KRSLEA 522 (525)
T ss_pred HHHHHh
Confidence 998865
No 77
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-63 Score=523.83 Aligned_cols=514 Identities=24% Similarity=0.305 Sum_probs=407.9
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
+....++.++|.++++.+|+++|+.+.+..+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 19 ~~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~ 98 (557)
T PRK07059 19 ASQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGY 98 (557)
T ss_pred CCCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCe
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCC--C---------cc
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQP--S---------TC 164 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~ 164 (562)
+++|++|.++.+++.++++.++++++++++.....+........ ...++.......... . ..
T Consensus 99 ~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (557)
T PRK07059 99 VVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTA-------VKHVVVASMGDLLGFKGHIVNFVVRRVKK 171 (557)
T ss_pred EEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccC-------CceeEEecccccccccccccccccccccc
Confidence 99999999999999999999999999998876655544332211 111111110000000 0 00
Q ss_pred cccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC----C---CC
Q 008535 165 SVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD----V---RD 237 (562)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~----~---~~ 237 (562)
........+...+.+................++++++++|||||||.||+|.++|.++..+.......+. . ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
T PRK07059 172 MVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPD 251 (557)
T ss_pred cccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCC
Confidence 0000011122334444433222222223346789999999999999999999999998776544332221 1 12
Q ss_pred CCeeeeecccccchhhH-HHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEE
Q 008535 238 MPVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVI 315 (562)
Q Consensus 238 ~~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~ 315 (562)
...+++.+|++|.+++. ..+..+..|++.++.+ ..++..+++.+++++++.+.++|.++..+..........+++++.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 34678889999998865 4556667788777665 458899999999999999999999999998876655567889999
Q ss_pred EEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCc
Q 008535 316 IVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTM 394 (562)
Q Consensus 316 i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~ 394 (562)
++.||+++++...+.|. .++.++++.||+||++.+++.+.... ......+|.|.++. .+++++. ++
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~v~i~d~-~~ 398 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA-----------TEFSGTIGLPLPST-EVSIRDD-DG 398 (557)
T ss_pred EEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC-----------CCcCCcccCccCCc-EEEEECC-CC
Confidence 99999999999998887 56899999999999987655432110 11234677777776 7888875 56
Q ss_pred ccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHH
Q 008535 395 KSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAV 473 (562)
Q Consensus 395 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 473 (562)
.+++.+ +.|||+++|+.++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||++
T Consensus 399 ~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~ 476 (557)
T PRK07059 399 NDLPLG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEV 476 (557)
T ss_pred CCCCCC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHH
Confidence 777666 679999999999999999999888877 48999999999999999999999999999999999999999999
Q ss_pred HhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhh
Q 008535 474 LLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 474 l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~ 552 (562)
+.++++|.+++|++.++...++.++++++..+. ..+.++++++++++++.+.+|..+.+++ +|+|++||++|+.|++.
T Consensus 477 l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 477 VASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDP-ALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred HHhCCceeEEEEEecccCCCCeeEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 999999999999999998888888888886543 4567899999999999999999988655 99999999999999864
No 78
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3.4e-63 Score=520.32 Aligned_cols=512 Identities=24% Similarity=0.305 Sum_probs=402.3
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
++.++.++|+++++.+|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 35599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|++|..+.+++.++++.++++++++++.. .......+...... ...++.+......................++
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLA-ALLPMALKFLEKGL----LDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCch-hhhHHHHHhhhccc----ceEEEEecccccccccccccccCCCcccccH
Confidence 999999999999999999999999998642 11111111111000 1222222211100000000000001123445
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh------cCCCCCCeeeeecccccch
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR------CDVRDMPVFLWTLDMFRCN 251 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~------~~~~~~~~~l~~~pl~~~~ 251 (562)
.++....... .......++++++++|||||||.||+|.++|+++...... ... ......+++++..|++|.+
T Consensus 174 ~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 174 ADFVKGAAAP-AEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSI-YDVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHhcCCCC-CCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHH-HHhhcccccccCCCCceEEEeccHHHHH
Confidence 5554322111 1112345679999999999999999999999998654332 121 1223457899999999988
Q ss_pred hhHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHH
Q 008535 252 GWCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQ 330 (562)
Q Consensus 252 gl~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~ 330 (562)
++.. ++.++..|++++.....++..+++.|.+++++++.++|.+++.|++........+++++.++.||++++++..++
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~ 331 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANF 331 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHH
Confidence 8765 556677788887777789999999999999999999999999998765444456789999999999999999998
Q ss_pred HH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecc-cCCcccccCCCCceeEEE
Q 008535 331 VA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQ-QNTMKSVPHDGKTLGEVM 408 (562)
Q Consensus 331 ~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~-~~~~~~~~~~~~~~Gel~ 408 (562)
++ .++.++++.||+||++..++..... .......+|.+.++. .+++.+ .+.+..++.+ +.|||+
T Consensus 332 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel~ 397 (541)
T TIGR03205 332 FERKTGLKLKSGWGMTETCSPGTGHPPE-----------GPDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGELR 397 (541)
T ss_pred HHHHhCCCeecccccccCCcccccCCCC-----------CCCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEEE
Confidence 87 4689999999999998766543211 011123567666666 666654 2455666654 679999
Q ss_pred EcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEee
Q 008535 409 FRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGK 488 (562)
Q Consensus 409 v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 488 (562)
++|++++.||+++++.+.+.|.++||+|||+++++++|++++.||.+|+||.+|.+++|.+||+.+.+++.|.+++|++.
T Consensus 398 v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~ 477 (541)
T TIGR03205 398 IRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGI 477 (541)
T ss_pred EecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEeCCCCC-CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHh
Q 008535 489 VDDQLKEVPVAFVKLKEGRE-ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLR 550 (562)
Q Consensus 489 ~~~~~~~~~v~~v~~~~~~~-~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~ 550 (562)
+++..++.+++++++.++.. .+.+++.++++++++++++|..+.+++ ||+|++||++|++|+
T Consensus 478 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 478 PDQYRGEAAKAFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CCcccCceEEEEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 98888888999998876532 567899999999999999999888655 999999999999874
No 79
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.3e-64 Score=507.86 Aligned_cols=501 Identities=23% Similarity=0.277 Sum_probs=377.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC----CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG----TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~----~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
..++..++.++++.+|+.+++... ...+||+|+++++.++|.+|.+.|+.+||+|+|++.|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 458899999999999999898864 3789999999999999999999999779999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH-HHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE-VVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSG 173 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (562)
++.||+.++.+++++.++|++++++++|++..... .+.......+... . ........... ..+...........+
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~~~~~~~ 170 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVV-D--LIVIIDLVREA-VEAKALVLEVFPDEG 170 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchh-h--hhhhhhhhhhc-cchhhcccccccccc
Confidence 99999999999999999999999999999985433 3332222111100 0 00000000000 000000000000001
Q ss_pred CCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC-CCCCCeeeeecccccchh
Q 008535 174 SLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD-VRDMPVFLWTLDMFRCNG 252 (562)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~g 252 (562)
...+ . ...........+..++|.|.|+|||||||.||||++||+|+.++.......+. .+++|+.++.+|+.|++.
T Consensus 171 ~~~~-~--~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~E 247 (613)
T COG1022 171 ISLF-L--IDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFE 247 (613)
T ss_pred chhh-h--hcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHH
Confidence 1111 0 11111112224567899999999999999999999999999999999999996 999999999999999999
Q ss_pred hHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc--------------------------
Q 008535 253 WCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD-------------------------- 306 (562)
Q Consensus 253 l~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-------------------------- 306 (562)
..+....... +........++..++..+++++||+++++|.+|+.+.+....+
T Consensus 248 r~~~~~~~~~-~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~ 326 (613)
T COG1022 248 RAFEGGLALY-GGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRA 326 (613)
T ss_pred HHHHHHHHhh-cceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh
Confidence 8865333333 3344445679999999999999999999999999885532100
Q ss_pred ---------------------cccc-cceEEEEEeCCCChHHHHHHHHhcCCeeeccccCccccCcccccccCCCCCCCc
Q 008535 307 ---------------------QNQL-QRKVIIVIAGVLPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSA 364 (562)
Q Consensus 307 ---------------------~~~l-~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~ 364 (562)
...+ ..+|.+++||+++++++...|+..|+++.++||+|||++.++....
T Consensus 327 ~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~-------- 398 (613)
T COG1022 327 LLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPP-------- 398 (613)
T ss_pred hcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccc--------
Confidence 0011 3789999999999999999999999999999999999988887532
Q ss_pred CCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEc
Q 008535 365 LDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRN 443 (562)
Q Consensus 365 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~ 443 (562)
.......+|.|.++. +++|.+. |||+|+||++|+|||++|+.|.+.|. ||||+|||+|.+|
T Consensus 399 ----~~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d 460 (613)
T COG1022 399 ----DRFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELD 460 (613)
T ss_pred ----cCcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEc
Confidence 223345667777776 6677663 99999999999999999999999997 9999999999999
Q ss_pred CCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC------------CC
Q 008535 444 PDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE------------AS 510 (562)
Q Consensus 444 ~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~------------~~ 510 (562)
++|+|+++||.+|+|| .+|++|.|+.||+.+.++|.|.+++|++ +++ ..++++|+++...- .+
T Consensus 461 ~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k---~~~~AlIvp~~~~l~~~a~~~~~~~~~~ 536 (613)
T COG1022 461 EDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDK---KFLVALIVPDFDALEKWAESLNKVISAS 536 (613)
T ss_pred CCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCC---cceEEEEeCCHHHHHHHHHhccccccCC
Confidence 9999999999999999 8999999999999999999999999998 332 24788888764310 01
Q ss_pred H------HHHHHHH----h---ccCCCCCCCcEEEeec-------ccCCCCCcchHHHHhhhhhhhc
Q 008535 511 P------EELVTFC----G---DELPSCMVPRAIFFED-------IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 511 ~------~~l~~~~----~---~~l~~~~~p~~i~~~~-------lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
. .++.+.+ . .....+..+..+.+.. --.|++-|++|..+.+.|.+.-
T Consensus 537 ~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i 603 (613)
T COG1022 537 REELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEI 603 (613)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHH
Confidence 1 1122221 1 1123334444444333 2378999999999998887764
No 80
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.6e-65 Score=622.55 Aligned_cols=488 Identities=21% Similarity=0.232 Sum_probs=414.1
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..++.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++|.++.+++.++++.+++++++++....+.+.... ....+.++....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~-----------~~~~~~~~~~~~-------------------- 3222 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA-----------GDTALTLDRLDL-------------------- 3222 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc-----------CCceeeecchhh--------------------
Confidence 9999999999999999999999999876543321100 111111111100
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
.............++++++|+|||||||.||||+++|+++.....+....+++.++|+++...|++|..++...+.
T Consensus 3223 ----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~ 3298 (3956)
T PRK12467 3223 ----NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLW 3298 (3956)
T ss_pred ----cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHH
Confidence 0000001112246789999999999999999999999999999999989999999999999999999999999999
Q ss_pred hHhhceEEEEecc--CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c-
Q 008535 259 MAAVGGINVCIRT--VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F- 334 (562)
Q Consensus 259 ~~~~g~~~v~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~- 334 (562)
++..|+++++.+. .++..+++.++++++|++..+|++++.|++... ...++++|.+++|||+++++..+.|.+ +
T Consensus 3299 ~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~ 3376 (3956)
T PRK12467 3299 TLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLK 3376 (3956)
T ss_pred HHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCC
Confidence 9999999998875 789999999999999999999999999986542 346788999999999999999999874 3
Q ss_pred CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhh
Q 008535 335 GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV 414 (562)
Q Consensus 335 ~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 414 (562)
+.++++.||+||++..++....... .........+|.|.++. .+.|+|. .+++++.| +.|||+|+|+.+
T Consensus 3377 ~~~l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~v 3445 (3956)
T PRK12467 3377 PRGLTNGYGPTEAVVTVTLWKCGGD-------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVGL 3445 (3956)
T ss_pred CCEEEeCcccchhEeeeEEEecccc-------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEcchhh
Confidence 6789999999999876665432110 11112235678888887 8888875 67788776 789999999999
Q ss_pred hhhhcCCchhhHhhhc--------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 415 MLGYFKNPKATEEAFR--------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 415 ~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
++||+++++.|.++|. ++||||||+|++++||+++++||.||+||++|.+|+|.|||++|.++|+|.+++|+
T Consensus 3446 ~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~ 3525 (3956)
T PRK12467 3446 ARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVL 3525 (3956)
T ss_pred hhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEE
Confidence 9999999999999983 24799999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
..++ ..++.++++++.........+++++++++++|.|++|..+.+.+ ||+|++||++|++|++....
T Consensus 3526 ~~~~-~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3526 ARDG-AGGKQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred EecC-CCCcEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 8754 45778999999876655678899999999999999999887554 99999999999999987654
No 81
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.7e-64 Score=533.46 Aligned_cols=515 Identities=22% Similarity=0.285 Sum_probs=387.3
Q ss_pred CCCChHHHHHHHHHHcCCceEEEEC----C-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYG----T-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHF 88 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 88 (562)
...|+.++|++.++.+|+++|+... + ..+||+||.+++.++|..|.+.|+++||+|+|+++|+++|+++++
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3458999999999999999998642 1 246999999999999999999999999999999999999999999
Q ss_pred HhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH-HHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccccc
Q 008535 89 AVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE-VVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVA 167 (562)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
||+++|++++|+++.++.+++.++++.++++++|++..... .+........ ....++.++...... ....
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~------~l~~ii~~~~~~~~~---~~~~ 190 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK------RLKAIVSFTSVTEEE---SDKA 190 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC------CceEEEEECCCChHH---hhhh
Confidence 99999999999999999999999999999999999865322 2211111010 133444443211000 0000
Q ss_pred CCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh-----cCCCCCCeee
Q 008535 168 NNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR-----CDVRDMPVFL 242 (562)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~-----~~~~~~~~~l 242 (562)
........++.++...+........+..++|+++|+|||||||.||||++||+++.......... ..+.+.|+++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~l 270 (660)
T PLN02430 191 SQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYL 270 (660)
T ss_pred hcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEE
Confidence 00001124566665443322222223457899999999999999999999999998776654332 2467889999
Q ss_pred eecccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc----------------
Q 008535 243 WTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD---------------- 306 (562)
Q Consensus 243 ~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~---------------- 306 (562)
+.+|++|.++....+.++..|+++++... ++..+++.+++++||++.++|.+++.+.+.....
T Consensus 271 s~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 349 (660)
T PLN02430 271 SFLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALY 349 (660)
T ss_pred EeCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999998877677778888776643 7888999999999999999999998886521100
Q ss_pred ---------------c-------------ccc-cceEEEEEeCCCChHHHHHHHHhcC-CeeeccccCccccCccccccc
Q 008535 307 ---------------Q-------------NQL-QRKVIIVIAGVLPTIEVLEQVANFG-FNIRHAYGMTEVLGPAIVRQW 356 (562)
Q Consensus 307 ---------------~-------------~~l-~~l~~i~~~g~~l~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~ 356 (562)
. ..+ +++|.+++||+++++++.+.++.++ ..+++.||+||+++.++....
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~ 429 (660)
T PLN02430 350 KYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFP 429 (660)
T ss_pred HHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeecc
Confidence 0 001 5799999999999999877777665 679999999999876654321
Q ss_pred CCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeee
Q 008535 357 KPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHT 436 (562)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~T 436 (562)
. .......+|.|.++. .+++.+.++....+.+.+..|||+|+|++++.|||++++.|...|.+|||+|
T Consensus 430 ~-----------~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~T 497 (660)
T PLN02430 430 D-----------EMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHT 497 (660)
T ss_pred c-----------cCCCCCCccCCCCce-EEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceec
Confidence 0 011234567777666 7777653222222333335699999999999999999999999999999999
Q ss_pred CceeEEcCCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC--------
Q 008535 437 GDLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR-------- 507 (562)
Q Consensus 437 GD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~-------- 507 (562)
||+|++|+||++++.||.+|+|| .+|++|+|.+||.++.++|.|.+++|++.. .++.++++|++++..
T Consensus 498 GDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~ 574 (660)
T PLN02430 498 GDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDN 574 (660)
T ss_pred cceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhC
Confidence 99999999999999999999999 579999999999999999999999999832 356789999876421
Q ss_pred --CCC------HHHHH----H----HH-hccCCCCCCCcEEEeec--c-----cCCCCCcchHHHHhhhhhhhc
Q 008535 508 --EAS------PEELV----T----FC-GDELPSCMVPRAIFFED--I-----PVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 508 --~~~------~~~l~----~----~~-~~~l~~~~~p~~i~~~~--l-----P~t~~GKv~r~~l~~~~~~~~ 557 (562)
..+ ..+++ + .. ++.++.+.+++.+.+.+ + .+|+++|++|+.+.+.|.+.-
T Consensus 575 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 575 GFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 001 01222 2 22 23589999999988765 3 389999999999999887653
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=7.5e-64 Score=571.24 Aligned_cols=516 Identities=22% Similarity=0.240 Sum_probs=417.0
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEEC-CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYG-TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~-~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
....++.++++++++.+|+++|+.+. ++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 44568999999999999999999874 5799999999999999999987 489999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSL 175 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
+++|+++..+.+++.+++++++++++++++...+.+......... .....++..++.... .....
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----------~~~~~ 755 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL----PENVKVIYLEDLKAK-----------ISKVD 755 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc----ccCceEEEeehhccc-----------cchhH
Confidence 999999999999999999999999999997765544321100000 001222222211100 00001
Q ss_pred chhhhhhcc--cCc---cccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccc
Q 008535 176 DYNDLLEMG--KAD---FEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRC 250 (562)
Q Consensus 176 ~~~~~~~~~--~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~ 250 (562)
.+.+..... +.. .....+..++|+++++|||||||.||+|.+||+++..+.......+++.++|++++.+|++|.
T Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 835 (1146)
T PRK08633 756 KLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHS 835 (1146)
T ss_pred HHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHH
Confidence 111111110 000 000123457899999999999999999999999999988888888899999999999999999
Q ss_pred hhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHH
Q 008535 251 NGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVL 328 (562)
Q Consensus 251 ~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~ 328 (562)
+++.. .+.++..|+++++.+ ..++..+++.++++++|++.++|.+++.+.+.......+++++|.+++||++++++..
T Consensus 836 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~ 915 (1146)
T PRK08633 836 FGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVA 915 (1146)
T ss_pred HhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHH
Confidence 99875 677788888888766 4789999999999999999999999999988765556678899999999999999999
Q ss_pred HHHH-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 329 EQVA-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 329 ~~~~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
+.++ .++.++++.||+||+++.++........... ..........+|.|.++. .++++|.+++++++.+ +.|||
T Consensus 916 ~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~--~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel 990 (1146)
T PRK08633 916 DAFEEKFGIRILEGYGATETSPVASVNLPDVLAADF--KRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLI 990 (1146)
T ss_pred HHHHHHhCCCeecccccccCcceEEEecCccccccc--ccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEE
Confidence 9998 5699999999999998766543211110000 001112345788888887 8899988788888776 67999
Q ss_pred EEcchhhhhhhcCCchhhHhhhcc----ceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCC--Cce
Q 008535 408 MFRANTVMLGYFKNPKATEEAFRN----GWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNP--KVL 481 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~~----g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~--~v~ 481 (562)
+++|+.++.||+++++.+.+.|.+ |||+|||+|++|+||++++.||.||+||++|.+|+|.+||++|.+++ .+.
T Consensus 991 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~ 1070 (1146)
T PRK08633 991 LIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEV 1070 (1146)
T ss_pred EEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCc
Confidence 999999999999999999998877 99999999999999999999999999999999999999999999998 567
Q ss_pred eEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhc-cCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhh
Q 008535 482 EAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGD-ELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 482 ~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+++|++.+++..++.++++++.. ..+.+++++++++ .++.+++|..+++++ +|+|++||++|++|+++..+.
T Consensus 1071 ~~~v~~~~~~~~g~~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1071 VFAVTAVPDEKKGEKLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred eEEEEeccCCCCCcEEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 89999999999999999988852 3467889998875 699999999988655 999999999999999986654
No 83
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.8e-63 Score=518.72 Aligned_cols=487 Identities=18% Similarity=0.237 Sum_probs=401.0
Q ss_pred ChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec
Q 008535 21 TPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL 100 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (562)
++.+.|.+.++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhh
Q 008535 101 NTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDL 180 (562)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
++.++.+++.++++..+++.++++......... .. .+.+.. ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~-------------~~-~~~~~~---------------------~~~~ 125 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAVG-------------TQ-IITLSA---------------------LEQA 125 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEecccccccccC-------------Cc-eEEchH---------------------hhhh
Confidence 999999999999999999999998764322110 00 111100 0000
Q ss_pred hhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhH
Q 008535 181 LEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMA 260 (562)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~ 260 (562)
..... ......+..++++++++|||||||.||+|.++|+++.....+....+++..+++++...|++|..++..++.++
T Consensus 126 ~~~~~-~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l 204 (502)
T TIGR01734 126 ETSGG-PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCL 204 (502)
T ss_pred hhhcC-CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHH
Confidence 10110 01111223567899999999999999999999999998888888888899999999999999999999899999
Q ss_pred hhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hc-C
Q 008535 261 AVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NF-G 335 (562)
Q Consensus 261 ~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~-~ 335 (562)
..|+++++.+. .++..+++.+.+++++.+.++|.+++.++.........+++++.++++|++++++..+.+. .+ +
T Consensus 205 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~ 284 (502)
T TIGR01734 205 ASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPK 284 (502)
T ss_pred HCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCC
Confidence 99999998764 5889999999999999999999999887765544556688999999999999999999987 44 7
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhh
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVM 415 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 415 (562)
.++++.||+||+++.+........ .........+|.+.++. .++|.+. ++.+++.+ +.|||+++|+.++
T Consensus 285 ~~~~~~yG~tE~~~~~~~~~~~~~-------~~~~~~~~~vg~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~ 353 (502)
T TIGR01734 285 ATIYNTYGPTEATVAVTSVKITQE-------ILDQYPRLPIGFAKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVS 353 (502)
T ss_pred cEEEeCccCCcceEEEEEEEcccc-------ccccCCccccccccCCC-EEEEECC-CCCCCCCC--CeeEEEEcccccc
Confidence 899999999998754443221110 00111223567777766 7888876 46677665 6799999999999
Q ss_pred hhhcCCchhhHhhhc----cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeee-C
Q 008535 416 LGYFKNPKATEEAFR----NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKV-D 490 (562)
Q Consensus 416 ~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~ 490 (562)
.||+++++.+...|. .+||+|||+|++|++ ++++.||.+|+|+.+|++|+|.+||+.+.++|.|.++++++.. .
T Consensus 354 ~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 432 (502)
T TIGR01734 354 KGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNK 432 (502)
T ss_pred ccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcC
Confidence 999999998887763 359999999999976 9999999999999999999999999999999999999999866 4
Q ss_pred CCCCceeEEEEEeCCCCCCC----HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 491 DQLKEVPVAFVKLKEGREAS----PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 491 ~~~~~~~v~~v~~~~~~~~~----~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
...++.+++++++....... .+++++.+++.++++.+|+.+++++ ||+|++||++|++|++++.+
T Consensus 433 ~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~~ 502 (502)
T TIGR01734 433 DHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVNG 502 (502)
T ss_pred CCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhcC
Confidence 44567888888876543222 2678999999999999999988665 99999999999999998753
No 84
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.1e-63 Score=575.30 Aligned_cols=489 Identities=19% Similarity=0.174 Sum_probs=406.5
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
+..++.++|+++++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++||+|+++++++++++++++||+++|+++
T Consensus 456 ~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 456 PETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred CcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+|++|.++.+++..+++.+++++++++......+... . .........
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~-------~~~~~~~~~---------------------- 582 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P-------DLTSLCYNA---------------------- 582 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C-------Cceeeeccc----------------------
Confidence 9999999999999999999999999987654332110 0 000000000
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHH
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTW 257 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~ 257 (562)
..... .........++++++++|||||||.||||+++|+++.....+....+++.++|+++...|++|..++...+
T Consensus 583 --~~~~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~ 658 (1296)
T PRK10252 583 --PLAPQ--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFF 658 (1296)
T ss_pred --ccccc--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHH
Confidence 00000 00011123567999999999999999999999999999999998999999999999999999999998899
Q ss_pred HhHhhceEEEEec---cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccc--ccccceEEEEEeCCCChHHHHHHHH
Q 008535 258 AMAAVGGINVCIR---TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQ--NQLQRKVIIVIAGVLPTIEVLEQVA 332 (562)
Q Consensus 258 ~~~~~g~~~v~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~l~~i~~~g~~l~~~~~~~~~ 332 (562)
.++..|+++++.+ ..++..+.+.++++++|++.++|+++..++....... ..++++|.+++||+++++++.+.|.
T Consensus 659 ~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~ 738 (1296)
T PRK10252 659 WPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQ 738 (1296)
T ss_pred HHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHH
Confidence 9999999999875 3689999999999999999999999999987643322 3468899999999999999999998
Q ss_pred h-cCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 333 N-FGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 333 ~-~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
+ ++.++++.||+||++..++.......... ........+|.|.++. .+.|++. .+++++.| +.|||+|+|
T Consensus 739 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~-----~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g 809 (1296)
T PRK10252 739 QLTGAPLHNLYGPTEAAVDVSWYPAFGEELA-----AVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTG 809 (1296)
T ss_pred hcCCCEEEeCCCcchhhheeeeeeccccccc-----ccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecc
Confidence 5 58899999999999866554332211100 0011234678777776 7788875 67777776 779999999
Q ss_pred hhhhhhhcCCchhhHhhhc-------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEE
Q 008535 412 NTVMLGYFKNPKATEEAFR-------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAA 484 (562)
Q Consensus 412 ~~~~~gy~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 484 (562)
+.++.||+++++.|.+.|. ++||+|||+|++++||.++++||.||+||++|.+|+|.+||++|.++|+|.+++
T Consensus 810 ~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~ 889 (1296)
T PRK10252 810 IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAV 889 (1296)
T ss_pred cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceE
Confidence 9999999999999998883 349999999999999999999999999999999999999999999999999998
Q ss_pred EEeee----CCCCC--ceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhh
Q 008535 485 VVGKV----DDQLK--EVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 485 v~~~~----~~~~~--~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~ 552 (562)
|+... +...+ ..++++++...+...+.+++++++++++|.|++|..+..+ +||+|++||++|++|++.
T Consensus 890 v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 890 THACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 77542 11112 3789999987665567889999999999999999988755 599999999999999764
No 85
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.3e-63 Score=522.01 Aligned_cols=510 Identities=23% Similarity=0.313 Sum_probs=404.3
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALA-QLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
.++.++|+++++.+|+++|+++.++++||+||.+++.++|+.|. +.|+++||+|+++++|+++++++++||+++|++++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVV 104 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEe
Confidence 58999999999999999999999999999999999999999997 68999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCC-CCc-----------ccc
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQ-PST-----------CSV 166 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~ 166 (562)
|++|.++.+++.++++.++++++++++.....+........ ...++......... +.. ...
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-------VKQVITTGLGDMLGFPKAALVNFVVKYVKKLV 177 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-------ccEEEEechhhhcccccchhhhhhhhhhhccc
Confidence 99999999999999999999999999877665554433211 11111111000000 000 000
Q ss_pred cCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcC----CCCC-Cee
Q 008535 167 ANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCD----VRDM-PVF 241 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~----~~~~-~~~ 241 (562)
......+...+.+................++++++++|||||||.||+|.++|.++..+.......+. +..+ +.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08751 178 PEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVV 257 (560)
T ss_pred cccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceE
Confidence 00001112233333332221111122345689999999999999999999999999877766554443 3333 567
Q ss_pred eeecccccchhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEe
Q 008535 242 LWTLDMFRCNGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIA 319 (562)
Q Consensus 242 l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~ 319 (562)
+...|++|.+++.. .+..+..|++.++.. ..++..+++.++++++|++.++|.++..+.+.......+++++|.+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~g 337 (560)
T PRK08751 258 ITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGG 337 (560)
T ss_pred EEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeC
Confidence 78899999998764 455566677766554 5789999999999999999999999999988765555668899999999
Q ss_pred CCCChHHHHHHHHh-cCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCccccc
Q 008535 320 GVLPTIEVLEQVAN-FGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVP 398 (562)
Q Consensus 320 g~~l~~~~~~~~~~-~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 398 (562)
|+++++++.+.|++ ++..+++.||+||+++.++.+.... ......+|.+.++. .+++.+. ++..++
T Consensus 338 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~ 404 (560)
T PRK08751 338 GMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL-----------KEYNGSIGLPIPST-DACIKDD-AGTVLA 404 (560)
T ss_pred CCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc-----------cccCCCcCccCCCc-eEEEECC-CCCCCC
Confidence 99999999999884 5889999999999987654432110 11123567777766 7888875 667776
Q ss_pred CCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 399 HDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 399 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
.+ +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.|..+
T Consensus 405 ~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 405 IG--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred CC--CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhC
Confidence 65 6799999999999999999999888874 79999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhh
Q 008535 478 PKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 478 ~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~ 552 (562)
++|.+++|++.++...++.++++++.. ....+.++++++++++++.+++|..+.+++ ||+|++||++|++|++.
T Consensus 483 ~~v~~~~v~~~~~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 483 PGVLEVAAVGVPDEKSGEIVKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred cCeeeeEEEecCCCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 999999999999888888887777754 344677899999999999999999988665 99999999999999876
No 86
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.9e-62 Score=511.07 Aligned_cols=493 Identities=26% Similarity=0.352 Sum_probs=403.6
Q ss_pred HHHHHHH-HHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecC
Q 008535 23 IDFLERA-AHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALN 101 (562)
Q Consensus 23 ~~~l~~~-a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 101 (562)
.+++++. ++.+|+++|+++.+..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4666665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhh
Q 008535 102 TRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLL 181 (562)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
+.++.+++.++++.+++++++++....+.+.+....++. ...++..+... .....+.++.
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--------------~~~~~~~~~~ 146 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPH------LEHRVVVGRPE--------------AGEVQLAELL 146 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCC------ccEEEEeCCCC--------------cccccHHHHh
Confidence 999999999999999999999998876666554332221 12222221110 1112333333
Q ss_pred hcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH-HHhhcCCCCCCeeeeecccccchhhHH-HHHh
Q 008535 182 EMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA-QISRCDVRDMPVFLWTLDMFRCNGWCC-TWAM 259 (562)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~~~pl~~~~gl~~-~~~~ 259 (562)
....... ......++++++++|||||||.||+|.++|+++...... ....+++..+|++++.+|++|.+++.. .+.+
T Consensus 147 ~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 225 (508)
T TIGR02262 147 ATESEQF-KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFP 225 (508)
T ss_pred hcCCCcc-CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHH
Confidence 2221111 112234679999999999999999999999998877655 445668899999999999999999864 5556
Q ss_pred HhhceEEEEecc-CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcCCe
Q 008535 260 AAVGGINVCIRT-VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFGFN 337 (562)
Q Consensus 260 ~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~ 337 (562)
+..|++.++.+. +++..+++.+++++++.+.++|.++..++...........+++.++++|+++++++.+.|. .++.+
T Consensus 226 l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 305 (508)
T TIGR02262 226 MSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVD 305 (508)
T ss_pred HHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCc
Confidence 778888877653 6899999999999999999999999988766543334567899999999999999999988 56899
Q ss_pred eeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhh
Q 008535 338 IRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLG 417 (562)
Q Consensus 338 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 417 (562)
+++.||+||++++++.+... ......+|.+.++. .+++++ +++.+++.+ +.|||+++|+.++.|
T Consensus 306 v~~~YG~tE~~~~~~~~~~~------------~~~~~~~G~~~~g~-~v~i~d-~~~~~~~~g--~~Gel~i~~~~~~~g 369 (508)
T TIGR02262 306 IVDGIGSTEMLHIFLSNLPG------------DVRYGTSGKPVPGY-RLRLVG-DGGQDVAAG--EPGELLISGPSSATM 369 (508)
T ss_pred hhhCccccccCceeecCCcc------------CCCCCCcCCCCCCc-EEEEEC-CCCCCCCCC--CeeEEEEecCccccc
Confidence 99999999998755432110 01123567777665 788888 477777765 779999999999999
Q ss_pred hcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCcee
Q 008535 418 YFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVP 497 (562)
Q Consensus 418 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 497 (562)
|+++++.+...|.++||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||+.|.++++|.++++++.++...++.+
T Consensus 370 Y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~ 449 (508)
T TIGR02262 370 YWNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKP 449 (508)
T ss_pred cCCCHHHhHhhhhcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998887777888
Q ss_pred EEEEEeCCCCC---CCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhh
Q 008535 498 VAFVKLKEGRE---ASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 498 v~~v~~~~~~~---~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~ 552 (562)
.+++++.++.. ...++++++++++++++++|..+.+. +||+|++||++|+.|+++
T Consensus 450 ~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 450 KAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 88888766532 34678999999999999999988754 599999999999998763
No 87
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-62 Score=510.65 Aligned_cols=504 Identities=23% Similarity=0.282 Sum_probs=403.1
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
+.+|+.++|++.++++|+++|+.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 1 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 1 MAWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred CcccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCch
Q 008535 98 SALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDY 177 (562)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
+++++.++.+++.++++++++++++++....+.+.+....... ...++.++.... .....+..++
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~ 145 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPK------LRTLVVVEDGSG---------NDLLPGAVDY 145 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCC------ccEEEEecCCcc---------cccCCccccH
Confidence 9999999999999999999999999998766665544322110 223333332211 0111123455
Q ss_pred hhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---------cCC------CCCCeee
Q 008535 178 NDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---------CDV------RDMPVFL 242 (562)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---------~~~------~~~~~~l 242 (562)
.++.......... .....+.++++|||||||.||+|+++|+++..+....... ..+ ..+++++
T Consensus 146 ~~~~~~~~~~~~~--~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (533)
T PRK07798 146 EDALAAGSPERDF--GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRF 223 (533)
T ss_pred HHHHhccCCcCCC--CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEE
Confidence 5555433221111 1223456799999999999999999999987654432221 111 5668899
Q ss_pred eecccccchhhHHHHHhHhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHH-HHHhccc-cccccccceEEEEE
Q 008535 243 WTLDMFRCNGWCCTWAMAAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILN-MIANASA-SDQNQLQRKVIIVI 318 (562)
Q Consensus 243 ~~~pl~~~~gl~~~~~~~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~-~l~~~~~-~~~~~l~~l~~i~~ 318 (562)
...|++|.+++...+.++..|+++++.+ .+++..+++.+++++++.+.++|..+. .+..... .....+++++.+++
T Consensus 224 ~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~ 303 (533)
T PRK07798 224 PAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIAS 303 (533)
T ss_pred EecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEE
Confidence 9999999999998999999999999998 789999999999999999999987654 3333322 23456789999999
Q ss_pred eCCCChHHHHHHHHh-c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccC--ccccccccceecccCCc
Q 008535 319 AGVLPTIEVLEQVAN-F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREG--LNNLLIQGVDVKQQNTM 394 (562)
Q Consensus 319 ~g~~l~~~~~~~~~~-~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~i~~~~~~ 394 (562)
||+++++++.+.+++ + +..+++.||+||++.......... ....| .+.++. .+++.+. ++
T Consensus 304 gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~--------------~~~~g~~~~~~~~-~~~i~~~-~~ 367 (533)
T PRK07798 304 GGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG--------------AVHTGGPRFTIGP-RTVVLDE-DG 367 (533)
T ss_pred CCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC--------------CccCCCCccCCCc-eEEEECC-CC
Confidence 999999999999984 5 788999999999865444321100 01112 333333 7777776 55
Q ss_pred ccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc----cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHH
Q 008535 395 KSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR----NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEV 470 (562)
Q Consensus 395 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 470 (562)
.+++.+....|+++ .++.++.||++++..+.+.|. ++||+|||++++|++|.+++.||.+|+|+.+|.+|+|.+|
T Consensus 368 ~~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eI 446 (533)
T PRK07798 368 NPVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEV 446 (533)
T ss_pred CCCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHH
Confidence 66766643336665 556789999999999988884 3599999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHH
Q 008535 471 EAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVL 549 (562)
Q Consensus 471 E~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l 549 (562)
|+.+.+++.|.+++|++.++...++.+.+++++.++...+.+++.++++++++.|++|..+++. +||+|++||++|+.|
T Consensus 447 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~ 526 (533)
T PRK07798 447 EEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWA 526 (533)
T ss_pred HHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHH
Confidence 9999999999999999998888888899999988776678899999999999999999988765 499999999999999
Q ss_pred hhhhhh
Q 008535 550 RGKVNA 555 (562)
Q Consensus 550 ~~~~~~ 555 (562)
+++.++
T Consensus 527 ~~~~~~ 532 (533)
T PRK07798 527 KEQAAE 532 (533)
T ss_pred hhhhcc
Confidence 998775
No 88
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.4e-63 Score=529.38 Aligned_cols=506 Identities=19% Similarity=0.238 Sum_probs=378.4
Q ss_pred CCChHHHHHHHHHHcCCceEEEEC---------------------------CeeccHHHHHHHHHHHHHHHHHcCCCCCC
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYG---------------------------TVRFSWRQTHQICLKLASALAQLKISRGD 71 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd 71 (562)
..|+.++|.++++.+|+++|+.+. .+.+||+||.++++++|..|.+.|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 458999999999999999999872 36799999999999999999999999999
Q ss_pred EEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCcee
Q 008535 72 IVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLV 151 (562)
Q Consensus 72 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (562)
+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.......... ...++
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~-----~~~ii 222 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMP-----NTTII 222 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCC-----ceEEE
Confidence 9999999999999999999999999999999999999999999999999999876554443322211100 11233
Q ss_pred ccCCCCCCCCCcccccCCCCCCCCchhhhhhccc---CccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH
Q 008535 152 TIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGK---ADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA 228 (562)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~ 228 (562)
.+++.... .........++.++...+. .......+..++|+++++|||||||.||||++||+++.+....
T Consensus 223 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~ 295 (700)
T PTZ00216 223 YLDSLPAS-------VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILA 295 (700)
T ss_pred EECCCccc-------cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHH
Confidence 33221100 0000112345666655431 1111122346789999999999999999999999999887766
Q ss_pred HHhhc-----CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccCCHHHHHH-------HHHhcCeEEEEcchHHH
Q 008535 229 QISRC-----DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFD-------SILIHKVTHLCGQPRIL 296 (562)
Q Consensus 229 ~~~~~-----~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~ 296 (562)
....+ .+.+.|++++.+|++|.+++......+..|+++++. ++..+.+ .+++++||++.++|.++
T Consensus 296 ~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~ 372 (700)
T PTZ00216 296 LEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIF 372 (700)
T ss_pred HHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHH
Confidence 55443 246789999999999999987655556666655442 4555554 68899999999999999
Q ss_pred HHHHhccccc-------------------------c---------------c-cccceEEEEEeCCCChHHHHHHHHh-c
Q 008535 297 NMIANASASD-------------------------Q---------------N-QLQRKVIIVIAGVLPTIEVLEQVAN-F 334 (562)
Q Consensus 297 ~~l~~~~~~~-------------------------~---------------~-~l~~l~~i~~~g~~l~~~~~~~~~~-~ 334 (562)
+.+.+..... . . ..+++|.+++||++++++..+.++. +
T Consensus 373 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~ 452 (700)
T PTZ00216 373 DTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF 452 (700)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh
Confidence 9886532100 0 0 0157999999999999999888874 4
Q ss_pred CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhh
Q 008535 335 GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV 414 (562)
Q Consensus 335 ~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 414 (562)
+ ++++.||+||+++.++.... .......+|.|.++. .++|++.+.... ....++.|||+|+|+++
T Consensus 453 ~-~l~~~YG~TEt~~~~~~~~~------------~~~~~~svG~p~~g~-evkI~d~~~~~~-~~~~~~~GEL~vrG~~v 517 (700)
T PTZ00216 453 G-MVIQGWGLTETVCCGGIQRT------------GDLEPNAVGQLLKGV-EMKLLDTEEYKH-TDTPEPRGEILLRGPFL 517 (700)
T ss_pred h-hHhhccCcccccccccccCC------------CCCCCCCcCCcCCCe-EEEEeechhhcc-CCCCCCCceEEEcCCcc
Confidence 6 99999999999765543211 111235678888887 888887643211 11112459999999999
Q ss_pred hhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeE--EEEeeeC
Q 008535 415 MLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEA--AVVGKVD 490 (562)
Q Consensus 415 ~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~ 490 (562)
+.|||++|+.|.+.| .+|||+|||+|++|+||.++++||.||+|| .+|++|+|.+||+++.++|.|.++ +|+..++
T Consensus 518 ~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~ 597 (700)
T PTZ00216 518 FKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA 597 (700)
T ss_pred cchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC
Confidence 999999999999999 489999999999999999999999999999 999999999999999999999973 4444332
Q ss_pred CCCCceeEEEEEeCCCC--------C--CC----------HHHHHHHH-----hccCCCCCCCcEEEeec--c-----cC
Q 008535 491 DQLKEVPVAFVKLKEGR--------E--AS----------PEELVTFC-----GDELPSCMVPRAIFFED--I-----PV 538 (562)
Q Consensus 491 ~~~~~~~v~~v~~~~~~--------~--~~----------~~~l~~~~-----~~~l~~~~~p~~i~~~~--l-----P~ 538 (562)
...++++|+++... . .. .+.+.+.+ +..+..+..++.+.+.+ + -+
T Consensus 598 ---~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~l 674 (700)
T PTZ00216 598 ---RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVL 674 (700)
T ss_pred ---CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCC
Confidence 24578888865310 0 01 11122222 23577888888888765 2 26
Q ss_pred CCCCcchHHHHhhhhhhhc
Q 008535 539 NSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 539 t~~GKv~r~~l~~~~~~~~ 557 (562)
|+++|++|+.+++.|.+.-
T Consensus 675 T~t~K~~R~~i~~~y~~~i 693 (700)
T PTZ00216 675 TAAMKLKRRVIDERYADLI 693 (700)
T ss_pred ChhhccchHHHHHHHHHHH
Confidence 9999999999999998764
No 89
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.7e-63 Score=525.76 Aligned_cols=499 Identities=18% Similarity=0.165 Sum_probs=383.2
Q ss_pred cccCCCCCChHHHHHHHHHHcCCceEEEECC-----eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Q 008535 13 ASANNVPLTPIDFLERAAHVYGDATSIIYGT-----VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLH 87 (562)
Q Consensus 13 ~~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 87 (562)
..++..+.|+.++|+++++.+|+++|+.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 32 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 32 EPLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CCCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 4455667799999999999999999998742 68999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEEecCCCCC-----HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC
Q 008535 88 FAVPMAGAVLSALNTRLD-----SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPS 162 (562)
Q Consensus 88 lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
+||+++|++++|+++.++ .+++.++++.++++++|++.... ........... ...++......
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~~-----~~~~i~~~~~~----- 179 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVPA-----DVEVVAVRGAV----- 179 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhccC-----CceEEEecCCC-----
Confidence 999999999999999988 79999999999999999985421 11111111100 11112111100
Q ss_pred cccccCCCCCCCCchhhhhhcccCcc--ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCC--CC
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKADF--EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVR--DM 238 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~ 238 (562)
...+...+.++........ .......++|+++|+|||||||.||||++||+++..+.......+... ..
T Consensus 180 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~ 252 (614)
T PRK08180 180 -------PGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEP 252 (614)
T ss_pred -------CCcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCC
Confidence 0001234555443321110 111224568999999999999999999999999988877776666653 56
Q ss_pred CeeeeecccccchhhH-HHHHhHhhceEEEEec-cCCH---HHHHHHHHhcCeEEEEcchHHHHHHHhcccc----cccc
Q 008535 239 PVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIR-TVSA---KIIFDSILIHKVTHLCGQPRILNMIANASAS----DQNQ 309 (562)
Q Consensus 239 ~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~-~~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~~~~ 309 (562)
+++++.+|++|.+++. .++.++..|+++++.+ .+++ ..+++.++++++|+++++|.++..|++.... ....
T Consensus 253 ~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~ 332 (614)
T PRK08180 253 PVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRF 332 (614)
T ss_pred cEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhh
Confidence 8999999999999875 4566778888888765 2443 4678889999999999999999999875322 2235
Q ss_pred ccceEEEEEeCCCChHHHHHHHHh-----cC--CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccc
Q 008535 310 LQRKVIIVIAGVLPTIEVLEQVAN-----FG--FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLL 382 (562)
Q Consensus 310 l~~l~~i~~~g~~l~~~~~~~~~~-----~~--~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 382 (562)
++++|.+++||+++++++.+.+.+ ++ +++++.||+||++++++..... ......+|.|.++
T Consensus 333 ~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~------------~~~~~svG~p~pg 400 (614)
T PRK08180 333 FSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP------------LSRAGNIGLPAPG 400 (614)
T ss_pred ccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc------------cCCCCcccCccCC
Confidence 789999999999999999988874 23 6799999999998665543211 1123456777666
Q ss_pred cccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc-cceeeeCceeEE----cCCCcEEEeccccce
Q 008535 383 IQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR-NGWYHTGDLAVR----NPDGYVQMKDRRKDI 457 (562)
Q Consensus 383 ~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~----~~~g~l~~~GR~~d~ 457 (562)
. .+++++.+ +.|||+++|++++.||+++++.+.+.|. +|||+|||+|++ |++|.+++.||.+|+
T Consensus 401 ~-~v~i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~ 469 (614)
T PRK08180 401 C-EVKLVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAED 469 (614)
T ss_pred c-EEEEecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhh
Confidence 6 66666531 3499999999999999999999999884 899999999999 468999999999998
Q ss_pred ee-cCCeEec--hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC---------------CCCHHHHHHHHh
Q 008535 458 II-SGAEIIS--SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR---------------EASPEELVTFCG 519 (562)
Q Consensus 458 i~-~~G~~v~--~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~---------------~~~~~~l~~~~~ 519 (562)
|+ .+|++++ |.++|.++.+||.|.+++|++.+++. +.++|+++++. ..+.++++++++
T Consensus 470 i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 545 (614)
T PRK08180 470 FKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFR 545 (614)
T ss_pred EEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHH
Confidence 88 6798776 78889999999999999999987653 67888876441 124467888887
Q ss_pred ccCCCCC--------CCcEEEeec-ccCC------CCCcchHHHHhhhhhhhc
Q 008535 520 DELPSCM--------VPRAIFFED-IPVN------STGKVQKFVLRGKVNATA 557 (562)
Q Consensus 520 ~~l~~~~--------~p~~i~~~~-lP~t------~~GKv~r~~l~~~~~~~~ 557 (562)
+.+..++ +|+++.+.+ +|++ ++||+.|+.+.+.|.+.-
T Consensus 546 ~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i 598 (614)
T PRK08180 546 ERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALV 598 (614)
T ss_pred HHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHH
Confidence 7776666 898888655 7755 566889999988887754
No 90
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-62 Score=506.75 Aligned_cols=457 Identities=27% Similarity=0.329 Sum_probs=383.6
Q ss_pred HHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHH
Q 008535 29 AAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSAT 108 (562)
Q Consensus 29 ~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 108 (562)
.++..++++|+.++++++||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+++..+.++
T Consensus 9 ~~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~ 83 (471)
T PRK07787 9 VAAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAE 83 (471)
T ss_pred hhcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHH
Confidence 34557899999999999999999999999999996 4799999999999999999999999999999999999999
Q ss_pred HHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCcc
Q 008535 109 LASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADF 188 (562)
Q Consensus 109 l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (562)
+..+++++++++++++..... .. .+........ ..+.
T Consensus 84 l~~~l~~~~~~~il~~~~~~~------~~---------~~~~~~~~~~------------------~~~~---------- 120 (471)
T PRK07787 84 RRHILADSGAQAWLGPAPDDP------AG---------LPHVPVRLHA------------------RSWH---------- 120 (471)
T ss_pred HHHHHHhcCCCEEEecCCccc------cc---------ccceeeeccc------------------cccc----------
Confidence 999999999999999863110 00 0000000000 0000
Q ss_pred ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHH-HHHhHhhceEEE
Q 008535 189 EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCC-TWAMAAVGGINV 267 (562)
Q Consensus 189 ~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v 267 (562)
......++++++++|||||||.||+|.++|+++..........+++..++++++.+|++|.+|+.. .+.++..|++++
T Consensus 121 -~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 199 (471)
T PRK07787 121 -RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFV 199 (471)
T ss_pred -cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEE
Confidence 001134679999999999999999999999999988888888888999999999999999999875 667788899998
Q ss_pred EeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCcc
Q 008535 268 CIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTE 346 (562)
Q Consensus 268 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE 346 (562)
..+..++..+++.++ ++++++.++|.++..|++.... ...++++|.++.||++++++..+.|+ .++.++++.||+||
T Consensus 200 ~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 277 (471)
T PRK07787 200 HTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTE 277 (471)
T ss_pred ecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccc
Confidence 888899999999999 9999999999999999875432 24578899999999999999999998 46889999999999
Q ss_pred ccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhH
Q 008535 347 VLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATE 426 (562)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 426 (562)
++........ .......+|.+.++. .++|++. ++.+++.++++.|||+++|+.++.||+++++.+.
T Consensus 278 ~~~~~~~~~~------------~~~~~~~vG~~~~g~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~ 343 (471)
T PRK07787 278 TLITLSTRAD------------GERRPGWVGLPLAGV-ETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATA 343 (471)
T ss_pred cCcceecCCC------------CcccCCcccccCCCc-EEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhch
Confidence 9754332210 111234577777776 8888886 4667764433579999999999999999999998
Q ss_pred hhhc-cceeeeCceeEEcCCCcEEEeccc-cceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeC
Q 008535 427 EAFR-NGWYHTGDLAVRNPDGYVQMKDRR-KDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLK 504 (562)
Q Consensus 427 ~~~~-~g~~~TGD~~~~~~~g~l~~~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~ 504 (562)
..|. +|||+|||+|++++||.+++.||. ||+++.+|.+++|.+||+.|..++.|.+++|++.++...++.++++++..
T Consensus 344 ~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~ 423 (471)
T PRK07787 344 AAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA 423 (471)
T ss_pred hcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeC
Confidence 8886 899999999999999999999996 89999999999999999999999999999999999888889999999873
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhh
Q 008535 505 EGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 505 ~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~ 552 (562)
...+.+++.++++++++++++|..+.+++ ||+|++||++|++|++.
T Consensus 424 --~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 424 --DDVAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred --CCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 34678899999999999999999887655 99999999999999764
No 91
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-61 Score=509.91 Aligned_cols=514 Identities=23% Similarity=0.340 Sum_probs=405.2
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
.++.++|+++++.+|+++|+.+.+.++||.||.++++++|.+|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 479999999999999999999999999999999999999999985 8999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcc---c---------c
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTC---S---------V 166 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~ 166 (562)
|++|..+.+++.++++.+++++++++.+..+.+........ ...++............. . .
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTP-------VKHVILTRMGDQLSTAKGTLVNFVVKYIKRLV 175 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcC-------cceEEEecccccccccccccccchhhhccccc
Confidence 99999999999999999999999998876665554332211 111111000000000000 0 0
Q ss_pred cCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc---CCCCCCeeee
Q 008535 167 ANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC---DVRDMPVFLW 243 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~ 243 (562)
+........++.+................++++++++|||||||.||+|.++|.++..+.......+ .....+.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 176 PKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred ccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 0000001112222222111111111123567999999999999999999999999887665443333 2344567888
Q ss_pred ecccccchhhHH-HHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCC
Q 008535 244 TLDMFRCNGWCC-TWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGV 321 (562)
Q Consensus 244 ~~pl~~~~gl~~-~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~ 321 (562)
.+|++|.+++.. .+..+..|++.++.. ..++..+++.+++++++.+.++|.+++.|..........++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 999999988654 555666777766653 568889999999999999999999999998876555566789999999999
Q ss_pred CChHHHHHHHHh-cCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCC
Q 008535 322 LPTIEVLEQVAN-FGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHD 400 (562)
Q Consensus 322 ~l~~~~~~~~~~-~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 400 (562)
++++.+.+.|++ ++.++++.||+||++..++.+.... ......+|.+.++. .+++++. ++..++.+
T Consensus 336 ~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~-----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g 402 (560)
T PRK08974 336 AVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL-----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG 402 (560)
T ss_pred cCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC-----------cccCCccccCcCCC-EEEEECC-CCCCCCCC
Confidence 999999999884 6899999999999987665543211 11123567776666 7788775 56777666
Q ss_pred CCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCc
Q 008535 401 GKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKV 480 (562)
Q Consensus 401 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 480 (562)
+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+++|.+||+.|.++++|
T Consensus 403 --~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v 480 (560)
T PRK08974 403 --EPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKV 480 (560)
T ss_pred --CceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCe
Confidence 679999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhh
Q 008535 481 LEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 481 ~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
.+++|++.++...++.++++++..+ .....+++++++.++++.+.+|..+.++ +||+|++||++|++|++...+.
T Consensus 481 ~~~~v~~~~~~~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 481 LEVAAVGVPSEVSGEAVKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred eEEEEEeeecCCcceEEEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 9999999999888888888877554 3356789999999999999999998865 5999999999999999876653
No 92
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=5.4e-63 Score=503.64 Aligned_cols=429 Identities=19% Similarity=0.183 Sum_probs=353.4
Q ss_pred eccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
-+.|+||.+++.++|+.|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 37899999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred eccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEE
Q 008535 124 DYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVN 203 (562)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 203 (562)
+.+.... . ... .. . . .....++++++++
T Consensus 99 ~~~~~~~----------------~-----~~~-------------------~~------~-~-----~~~~~~~~~~~i~ 126 (452)
T PRK07445 99 LDQLKLS----------------H-----PPP-------------------LP------S-Q-----GILPNLETGWIMI 126 (452)
T ss_pred cCccccc----------------c-----CCC-------------------CC------c-c-----ccCCCCCCcEEEE
Confidence 7653210 0 000 00 0 0 0012457899999
Q ss_pred eccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHh
Q 008535 204 YTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILI 283 (562)
Q Consensus 204 ~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~ 283 (562)
|||||||.||||.+||+++..........+++.+ ++.++++|++|.+|+...+.++..|+++++.+............+
T Consensus 127 ~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~ 205 (452)
T PRK07445 127 PTGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPN 205 (452)
T ss_pred eCCCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhh
Confidence 9999999999999999999888777777776655 467889999999999888888999999988764333333344457
Q ss_pred cCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeeeccccCccccCcccccccCCCCCCC
Q 008535 284 HKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESS 363 (562)
Q Consensus 284 ~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~ 363 (562)
++++++.++|.+++.+++.. ...++++|.+++||++++++..+.++.++.++++.||+||++..+......
T Consensus 206 ~~~t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~------ 276 (452)
T PRK07445 206 PSDFFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKPD------ 276 (452)
T ss_pred cCceEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCch------
Confidence 89999999999999998632 245789999999999999999998887789999999999987554332100
Q ss_pred cCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEc
Q 008535 364 ALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRN 443 (562)
Q Consensus 364 ~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~ 443 (562)
........+|.+.++. .++|. .++.|||+|+|+.++.||++++.. .+|||+|||+|++|
T Consensus 277 ----~~~~~~~~~G~~~p~~-~v~i~-----------~g~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d 335 (452)
T PRK07445 277 ----DFLAGNNSSGQVLPHA-QITIP-----------ANQTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLD 335 (452)
T ss_pred ----hhccCCCcCCccCCCC-eEEEc-----------CCCcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEc
Confidence 0001123456666555 55554 125699999999999999985431 37899999999999
Q ss_pred CCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCC
Q 008535 444 PDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELP 523 (562)
Q Consensus 444 ~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~ 523 (562)
+||++++.||.||+||++|++|+|.+||++|.++|+|.+++|++.+++..|+.++++++..++ ..+.++++++++++++
T Consensus 336 ~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~ 414 (452)
T PRK07445 336 AQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLS 414 (452)
T ss_pred CCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999889999999987655 3567899999999999
Q ss_pred CCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 524 SCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 524 ~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
.|++|+.+.+++ ||+|++||++|++|++++.++-
T Consensus 415 ~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 415 PFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred cccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 999999988655 9999999999999999987754
No 93
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-62 Score=489.37 Aligned_cols=509 Identities=25% Similarity=0.326 Sum_probs=411.6
Q ss_pred CChHH-HHHHHHHHc-CCceEEEECC------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 20 LTPID-FLERAAHVY-GDATSIIYGT------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 20 ~ti~~-~l~~~a~~~-p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
.|+.. .+++..+.. ++.+++++.+ ..+||.|+.+++.++|+.|.++|+++||+|++++|+.++++++++||+
T Consensus 63 ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~ 142 (626)
T KOG1175|consen 63 LNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACA 142 (626)
T ss_pred hhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHh
Confidence 34443 334444444 7788877642 348999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH---------HHHHHHhhcCCCCcCCCCCceeccCCCCCCCCC
Q 008535 92 MAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE---------VVQNALDILSPNHKCDKAPLLVTIPECDHYQPS 162 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
++|++.+++...+++.++...++.+++|++++.+.... ...++...+...... ....+.
T Consensus 143 r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~--~~~~~~---------- 210 (626)
T KOG1175|consen 143 RIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRP--VWLDLI---------- 210 (626)
T ss_pred hcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccc--cceeeE----------
Confidence 99999999999999999999999999999999875432 122221111100000 000000
Q ss_pred cccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechh-HHHHHHHHHhhcCCCCCCee
Q 008535 163 TCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRG-AYLNSLAQISRCDVRDMPVF 241 (562)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~-l~~~~~~~~~~~~~~~~~~~ 241 (562)
+.... ....|+..+........ +.+...+|+.+|+|||||||.||++.+++.. ++..+......++++++|++
T Consensus 211 ---~~~~~--~d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~ 284 (626)
T KOG1175|consen 211 ---VSRRN--RDLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVL 284 (626)
T ss_pred ---Eeccc--ccccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceE
Confidence 00000 02344444443333322 5567788999999999999999999999876 56666677778899999999
Q ss_pred eeecccccchhhHH-HHHhHhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccc--cccceEEE
Q 008535 242 LWTLDMFRCNGWCC-TWAMAAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQN--QLQRKVII 316 (562)
Q Consensus 242 l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~--~l~~l~~i 316 (562)
.+...+.|+.|.++ .+.+++.|++.++.. ++++..+++.+.++++|.+++.|..++.|......... +.+++|.+
T Consensus 285 ~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~ 364 (626)
T KOG1175|consen 285 WCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTC 364 (626)
T ss_pred EEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEE
Confidence 99999999999876 566888999998875 46999999999999999999999999988776544333 33679999
Q ss_pred EEeCCCChHHHHHHHH-hcCC-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCc
Q 008535 317 VIAGVLPTIEVLEQVA-NFGF-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTM 394 (562)
Q Consensus 317 ~~~g~~l~~~~~~~~~-~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~ 394 (562)
.++||++.++..+++. .++. +|++.||+||+|+.++.+..... +..+...+.|.+++ .+.|.|+ +|
T Consensus 365 ~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~----------p~~pg~~~~p~~g~-~v~i~de-~g 432 (626)
T KOG1175|consen 365 GSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL----------PIKPGSAGKPFPGY-DVQILDE-NG 432 (626)
T ss_pred eecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC----------CcCccccCCCCCCc-ceEEECC-CC
Confidence 9999999999999998 5677 59999999999999887643221 44556777888888 8888887 78
Q ss_pred ccccCCCCceeEEEEcch---hhhhhhcCCchhhHhh-hc--cceeeeCceeEEcCCCcEEEeccccceeecCCeEechH
Q 008535 395 KSVPHDGKTLGEVMFRAN---TVMLGYFKNPKATEEA-FR--NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSL 468 (562)
Q Consensus 395 ~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~-~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 468 (562)
+.++.++ +.|+|+++.+ ..+++|+++++..... |. .|||.|||.+++|+||.+++.||.||+|+++|.++++.
T Consensus 433 ~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigta 511 (626)
T KOG1175|consen 433 NELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTA 511 (626)
T ss_pred CCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHH
Confidence 8887766 6799999985 6689999998844444 33 89999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC---HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcc
Q 008535 469 EVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS---PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKV 544 (562)
Q Consensus 469 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv 544 (562)
|||+++.+||.|.|++|++.+++..|+.+++||+++++.... .++|++++++.+.+++.|+.|.+++ ||+|.+||+
T Consensus 512 EIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKi 591 (626)
T KOG1175|consen 512 EIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKI 591 (626)
T ss_pred HHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchh
Confidence 999999999999999999999999999999999999985433 3688888999999999999999885 999999999
Q ss_pred hHHHHhhhhhhhccc
Q 008535 545 QKFVLRGKVNATAVG 559 (562)
Q Consensus 545 ~r~~l~~~~~~~~~~ 559 (562)
.|+.||++..+++.|
T Consensus 592 mRr~lrki~~g~~~~ 606 (626)
T KOG1175|consen 592 MRRALRKIASGKAVG 606 (626)
T ss_pred HHHHHHHHhccCccc
Confidence 999999999887544
No 94
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-62 Score=507.43 Aligned_cols=479 Identities=21% Similarity=0.301 Sum_probs=380.9
Q ss_pred HHHHHcCCceEEEEC--CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCC
Q 008535 28 RAAHVYGDATSIIYG--TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLD 105 (562)
Q Consensus 28 ~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 105 (562)
.+++.+|+++|+.+. +.++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467789999999863 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhccc
Q 008535 106 SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGK 185 (562)
Q Consensus 106 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (562)
.+++.++++.+++++++++....+........ ....+.+.... .....+.+......
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 141 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGAD---------LPLRLSFGGEI--------------DGFGSFEAALAGAG 141 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc---------cceEEEecCcc--------------cccccHHHHhcccC
Confidence 99999999999999999987654332221110 11111111000 00112222211110
Q ss_pred CccccCCCCCCCCceEEEeccCCCCCCCceEe--echhHHHHH----HHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 186 ADFEMMQPNHECDPISVNYTSGSTGDPKGVVY--SHRGAYLNS----LAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 186 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~--t~~~l~~~~----~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
. ......+.++++|||||||.||||.+ +|.++.... ......+.+...+++++.+|++|.+++...+..
T Consensus 142 ~-----~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~ 216 (501)
T PRK13390 142 P-----RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMV 216 (501)
T ss_pred C-----CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHH
Confidence 0 01122357999999999999999996 455544321 112345678889999999999999988665556
Q ss_pred HhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHHh-cCC
Q 008535 260 AAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVAN-FGF 336 (562)
Q Consensus 260 ~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~~~ 336 (562)
+..|+++++.+.+++..+++.++++++++++++|.++..|+..... ....++++|.++.+|++++++..+.+++ ++.
T Consensus 217 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~ 296 (501)
T PRK13390 217 HALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGP 296 (501)
T ss_pred HhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCC
Confidence 6789998888888999999999999999999999999998865422 2345779999999999999999998884 688
Q ss_pred eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh
Q 008535 337 NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML 416 (562)
Q Consensus 337 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 416 (562)
.+++.||+||+++++..... . .......+|.+.++ .+++++. ++.+++.| +.|||+++|++++.
T Consensus 297 ~~~~~YG~tE~~~~~~~~~~--~---------~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~ 360 (501)
T PRK13390 297 IVYEYYSSTEAHGMTFIDSP--D---------WLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPF 360 (501)
T ss_pred ceeeeecccccCceEEecch--h---------hccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCccc
Confidence 99999999999765433210 0 01122456777665 3677774 66777665 77999999999999
Q ss_pred hhcCCchhhHhhhc---cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCC
Q 008535 417 GYFKNPKATEEAFR---NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQL 493 (562)
Q Consensus 417 gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 493 (562)
||+++++.+...|. ++|++|||+|++|++|.+++.||.||+|+.+|.+|+|.+||++|.+++.|.+++|++++++..
T Consensus 361 gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~ 440 (501)
T PRK13390 361 RYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEM 440 (501)
T ss_pred cccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCccc
Confidence 99999999988874 679999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceeEEEEEeCCCCCCC---HHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHh
Q 008535 494 KEVPVAFVKLKEGREAS---PEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLR 550 (562)
Q Consensus 494 ~~~~v~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~ 550 (562)
++.+++++++.++.... .+++.++++++++.+++|..++++ +||+|++||++|++|+
T Consensus 441 ~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 441 GEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred CceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 99999999877653322 468999999999999999998865 4999999999999985
No 95
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.8e-63 Score=614.55 Aligned_cols=488 Identities=21% Similarity=0.196 Sum_probs=410.9
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
.++.++|+++++.+|+++|+++.+.++||+||.+++.++|+.|.+.|+++|++|+++++++++++++++||+++|++++|
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vp 2082 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVP 2082 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEee
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
++|.++.+++.++++.+++++++++......+.... ....+.+.... .
T Consensus 2083 ld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-----------~~~~~~~~~~~---------------------~ 2130 (5163)
T PRK12316 2083 LDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPA-----------GVARLPLDRDA---------------------E 2130 (5163)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccccc-----------ccceEeccchh---------------------h
Confidence 999999999999999999999999876543221100 00111111100 0
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
+.. .+. ........++++++|+|||||||.||||+++|+++.....+....+++.++|+++...|++|..++...+.+
T Consensus 2131 ~~~-~~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~ 2208 (5163)
T PRK12316 2131 WAD-YPD-TAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHP 2208 (5163)
T ss_pred hhc-cCc-cCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHH
Confidence 000 000 011122467899999999999999999999999999999998899999999999999999999999889999
Q ss_pred HhhceEEEEec--cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c-C
Q 008535 260 AAVGGINVCIR--TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F-G 335 (562)
Q Consensus 260 ~~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~-~ 335 (562)
+..|+++++.+ .+++..+++.++++++|++..+|++++.|........ ...++|.+++|||+++++..+.|.+ + +
T Consensus 2209 L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 2287 (5163)
T PRK12316 2209 LLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRP 2287 (5163)
T ss_pred HhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCC
Confidence 99999996655 3689999999999999999999999999987654332 2448999999999999999999984 3 6
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhh
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVM 415 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 415 (562)
.++++.||+||++..++......... .......+|.|.++. .+.|++. ++++++.| +.|||+|+|++++
T Consensus 2288 ~~l~n~YG~TE~~~~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~ 2356 (5163)
T PRK12316 2288 VYLFNGYGPTEAVVTPLLWKCRPQDP-------CGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLA 2356 (5163)
T ss_pred cEEEECccchhheeeeeeeecccccc-------cCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhc
Confidence 78999999999986655432211100 001124578888777 7888876 56777776 7899999999999
Q ss_pred hhhcCCchhhHhhhc--------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEe
Q 008535 416 LGYFKNPKATEEAFR--------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVG 487 (562)
Q Consensus 416 ~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 487 (562)
+||+++|+.|.+.|. ++||+|||+|++++||.++++||.||+||++|.+|+|.|||.+|.++|+|.+++|++
T Consensus 2357 ~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~ 2436 (5163)
T PRK12316 2357 RGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVA 2436 (5163)
T ss_pred ccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEE
Confidence 999999999999982 359999999999999999999999999999999999999999999999999999998
Q ss_pred eeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhh
Q 008535 488 KVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 488 ~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~ 554 (562)
.++. .++.++++|++.++.....++++++++++||.|++|..+++. .||+|+|||++|++|++...
T Consensus 2437 ~~~~-~~~~l~a~v~~~~~~~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 2503 (5163)
T PRK12316 2437 QDGA-SGKQLVAYVVPDDAAEDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPDV 2503 (5163)
T ss_pred EecC-CCeEEEEEEEecCCCccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCcc
Confidence 8766 678999999988777778899999999999999999988755 49999999999999987653
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.8e-62 Score=507.30 Aligned_cols=488 Identities=19% Similarity=0.239 Sum_probs=402.6
Q ss_pred CChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
+++.++|+++++.+|+++++.+.+..+||+||.+++.++|..|.+.|+++||+|+++++|+.+++++++||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++.++.+++..+++..++++++++....... . ....+... .+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~---------------------~~~~ 126 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLEI----L----------GIPVITLD---------------------ELKD 126 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccccc----c----------CCcEEehH---------------------Hhhh
Confidence 99999999999999999999999987641000 0 00011100 0000
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
... .........+..++++++++|||||||.||+|.++|+++.....+....+.+...++++...|++|..++...+.+
T Consensus 127 ~~~-~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (503)
T PRK04813 127 IFA-TGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPT 205 (503)
T ss_pred hhh-ccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHH
Confidence 000 0011111122456789999999999999999999999999888888888889999999999999999998888888
Q ss_pred HhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hc-
Q 008535 260 AAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NF- 334 (562)
Q Consensus 260 ~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~- 334 (562)
+..|+++++.+. .++..+++.+++++++.+..+|.+++.++.........+++++.++++|+++++...+.+. .+
T Consensus 206 l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~ 285 (503)
T PRK04813 206 LASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFP 285 (503)
T ss_pred HhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCC
Confidence 999999988764 5889999999999999999999999987766544556788999999999999999999988 45
Q ss_pred CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhh
Q 008535 335 GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV 414 (562)
Q Consensus 335 ~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 414 (562)
+..+++.||+||++..+......... ........+|.+.++. .++|.+. ++.+++.+ +.|||+++|+.+
T Consensus 286 ~~~~~~~yG~tE~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~ 354 (503)
T PRK04813 286 SATIYNTYGPTEATVAVTSIEITDEM-------LDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSV 354 (503)
T ss_pred CceEEeCcccchheeEEEEEEecccc-------cccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEecccc
Confidence 78899999999997654432221110 0011223466666666 7777775 66777665 679999999999
Q ss_pred hhhhcCCchhhHhhhc--c--ceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeC
Q 008535 415 MLGYFKNPKATEEAFR--N--GWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVD 490 (562)
Q Consensus 415 ~~gy~~~~~~~~~~~~--~--g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 490 (562)
+.||++++..+...|. + +||+|||+|++ ++|.+++.||.+|+|+.+|.+++|.+||+.+.++|+|.+++|++.++
T Consensus 355 ~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 433 (503)
T PRK04813 355 SKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNK 433 (503)
T ss_pred ccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeC
Confidence 9999999999988873 3 49999999999 89999999999999999999999999999999999999999999887
Q ss_pred CCCCceeEEEEEeCCCCC----CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 491 DQLKEVPVAFVKLKEGRE----ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 491 ~~~~~~~v~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
...++.+++++++.++.. ...++++++++++++.+++|..+.+++ ||+|++||++|++|++.+++
T Consensus 434 ~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 434 DHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred CCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 777788999988765421 122578999999999999999988665 99999999999999998763
No 97
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-62 Score=612.02 Aligned_cols=483 Identities=20% Similarity=0.178 Sum_probs=409.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
+.++.++|+++++.+|+++|+.+.++++||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++|.++.+++.++++.+++++++++......+... . ...++.++....
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-------~----~~~~~~~~~~~~-------------------- 638 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA-------A----GVQVLDLDRPAA-------------------- 638 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc-------c----CceEEEecCcch--------------------
Confidence 999999999999999999999999987643321100 0 111222211100
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
+..... .........++++++|+|||||||.||||+++|+++.....+....+++..+++++...|++|..++...+.
T Consensus 639 -~~~~~~-~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~ 716 (5163)
T PRK12316 639 -WLEGYS-EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFW 716 (5163)
T ss_pred -hhccCC-CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHH
Confidence 000000 011112245789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhceEEEEec---cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c
Q 008535 259 MAAVGGINVCIR---TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F 334 (562)
Q Consensus 259 ~~~~g~~~v~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~ 334 (562)
++..|+++++.+ ..++..+++.+.++++|+++++|++++.|++... ...++++|.+++|||+++++..+.+.+ +
T Consensus 717 ~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~ 794 (5163)
T PRK12316 717 PLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKL 794 (5163)
T ss_pred HHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhC
Confidence 999999999875 3789999999999999999999999999987542 245789999999999999999999863 3
Q ss_pred -CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchh
Q 008535 335 -GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANT 413 (562)
Q Consensus 335 -~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~ 413 (562)
+.++++.||+||++..++...... .......+|.|.++. .++|+|. ++++++.| +.|||+|+|++
T Consensus 795 ~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~ 860 (5163)
T PRK12316 795 PQAGLYNLYGPTEAAIDVTHWTCVE----------EGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRG 860 (5163)
T ss_pred CCCeEEeCcCcChheeeeeEEeccc----------ccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccc
Confidence 689999999999986544432111 011234678887777 7888886 57777766 77999999999
Q ss_pred hhhhhcCCchhhHhhhc-------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEE
Q 008535 414 VMLGYFKNPKATEEAFR-------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVV 486 (562)
Q Consensus 414 ~~~gy~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 486 (562)
++.||+++++.|.+.|. ++||+|||+|++++||.++++||.||+||++|.+|+|.|||++|.++|.|.+++|+
T Consensus 861 v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~ 940 (5163)
T PRK12316 861 LARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVL 940 (5163)
T ss_pred cChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEE
Confidence 99999999999998883 35999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhh
Q 008535 487 GKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 487 ~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~ 554 (562)
+.+ ++.++++|++.++.....+++++++++++|.|++|+.+.+.+ ||+|++||++|++|.+...
T Consensus 941 ~~~----~~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 941 AVD----GKQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred EcC----CCeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 875 678999999887666778899999999999999999988655 9999999999999987643
No 98
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-62 Score=602.96 Aligned_cols=491 Identities=19% Similarity=0.181 Sum_probs=408.0
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..++.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|++++++++++++++|||+++|++++
T Consensus 1573 ~~~~~~~~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~v 1652 (3956)
T PRK12467 1573 ARLVHQLIEDQAAATPEAVALVFGEQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYV 1652 (3956)
T ss_pred cccHHHHHHHHHHhCCCCeEEEeCCcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceee
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++|.++.+++.++++.+++++++++......+... . ...++.++...
T Consensus 1653 pldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-------~----~~~~~~~~~~~--------------------- 1700 (3956)
T PRK12467 1653 PLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-------D----GLRSLVLDQED--------------------- 1700 (3956)
T ss_pred ecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-------c----CCcEEEecccc---------------------
Confidence 999999999999999999999999987643322110 0 11122221110
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
.+...... ........++++++|+|||||||.||||+++|+++.....+....+++..+|+++...|++|..++...+.
T Consensus 1701 ~~~~~~~~-~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~ 1779 (3956)
T PRK12467 1701 DWLEGYSD-SNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWELFW 1779 (3956)
T ss_pred chhccCCC-CCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHHHHH
Confidence 00000000 01112245789999999999999999999999999999888888999999999999999999999988999
Q ss_pred hHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh-c
Q 008535 259 MAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F 334 (562)
Q Consensus 259 ~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~ 334 (562)
++..|+++++.+. .++..+++.++++++|++.++|++++.|..... ....++++|.+++|||+++++..+.|.+ +
T Consensus 1780 ~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~ 1858 (3956)
T PRK12467 1780 PLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERL 1858 (3956)
T ss_pred HHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhC
Confidence 9999999998763 579999999999999999999999999987532 2345789999999999999999998874 4
Q ss_pred -CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchh
Q 008535 335 -GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANT 413 (562)
Q Consensus 335 -~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~ 413 (562)
+.++++.||+||++..++........ ........+|.|.++. .+.|.|. .+++++.| +.|||+|+|++
T Consensus 1859 ~~~~l~n~YG~TE~t~~~t~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~vld~-~~~~vp~G--~~GEl~i~G~~ 1927 (3956)
T PRK12467 1859 PDTGLFNLYGPTETAVDVTHWTCRRKD-------LEGRDSVPIGQPIANL-STYILDA-SLNPVPIG--VAGELYLGGVG 1927 (3956)
T ss_pred CCCeEEeCccCCcCEEeEEEEeccccc-------cccCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecccc
Confidence 57899999999998666543221100 0011134678888777 7788775 67777776 77999999999
Q ss_pred hhhhhcCCchhhHhhhc--------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 414 VMLGYFKNPKATEEAFR--------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 414 ~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
+++||+++|+.|.++|. ++||+|||+|++++||.++++||.||+||++|.+|+|.+||++|.++|+|.+++|
T Consensus 1928 v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~v 2007 (3956)
T PRK12467 1928 LARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVV 2007 (3956)
T ss_pred ccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEE
Confidence 99999999999999882 3599999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhh
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREA--------SPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~--------~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~ 555 (562)
++.+ ...++.++++++....... ..+++++++++.+|.|++|..+++. +||+|+|||++|++|.+.+..
T Consensus 2008 v~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~~~ 2085 (3956)
T PRK12467 2008 IAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPDAS 2085 (3956)
T ss_pred EEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCccc
Confidence 9886 4456789999987654221 3468999999999999999988755 599999999999999876543
No 99
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.4e-62 Score=500.75 Aligned_cols=452 Identities=22% Similarity=0.250 Sum_probs=378.6
Q ss_pred ChHHHH-HHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe
Q 008535 21 TPIDFL-ERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA 99 (562)
Q Consensus 21 ti~~~l-~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (562)
++.+.+ .+.++.+|+++|+.+.+.++||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 344444 5668899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhh
Q 008535 100 LNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYND 179 (562)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
+++..+.+++..+++++++++++++.+.... .. + ... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----~---------~~~-~~~------------------------- 122 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENTF-SA----L---------TSL-HLQ------------------------- 122 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccch-hh----c---------ccc-ccc-------------------------
Confidence 9999999999999999999999998764221 00 0 000 000
Q ss_pred hhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHh
Q 008535 180 LLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAM 259 (562)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~ 259 (562)
.... .......++++++++|||||||.||+|.+||+++..........+++..+++++..+|++|.+|+...+.+
T Consensus 123 --~~~~---~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~ 197 (458)
T PRK09029 123 --LVEG---AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRW 197 (458)
T ss_pred --cccc---cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHH
Confidence 0000 00012346789999999999999999999999999988888888899999999999999999998877778
Q ss_pred HhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeee
Q 008535 260 AAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIR 339 (562)
Q Consensus 260 ~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~ 339 (562)
+..|+++++.+. ..+++.+ .+++.+..+|.++..|+..... ..++|.+++||++++++..+.+.+++.+++
T Consensus 198 l~~G~~v~~~~~---~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~ 268 (458)
T PRK09029 198 LYAGATLVVRDK---QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQGIRCW 268 (458)
T ss_pred HhCCceEEeCCh---HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHcCCcEe
Confidence 888998887653 4566666 4789999999999998876432 447999999999999999999988899999
Q ss_pred ccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhc
Q 008535 340 HAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYF 419 (562)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 419 (562)
+.||+||++...+.... .....+|.+.++. .+++.+ |||+++|+.++.||+
T Consensus 269 ~~YG~tE~~~~~~~~~~--------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~ 319 (458)
T PRK09029 269 CGYGLTEMASTVCAKRA--------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYW 319 (458)
T ss_pred ccccccccCcceeccCC--------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeee
Confidence 99999999764433210 0112356555544 444431 899999999999999
Q ss_pred CCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEE
Q 008535 420 KNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVA 499 (562)
Q Consensus 420 ~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~ 499 (562)
++++.+.....+|||+|||+|++| ||.+++.||.+|+||++|.+|+|.+||+.|.++|.|.+++|++.+++..++.+++
T Consensus 320 ~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a 398 (458)
T PRK09029 320 RQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVA 398 (458)
T ss_pred cCccccccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEE
Confidence 998877665678999999999999 9999999999999999999999999999999999999999999999988999999
Q ss_pred EEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcc
Q 008535 500 FVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 500 ~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
+|+... ..+.++++++++++++.|++|..+.+.+ +|+|++||++|+.|++++++.-+
T Consensus 399 ~v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 399 VVESDS--EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred EEEcCc--ccCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccC
Confidence 998763 3578899999999999999999988665 99999999999999999987643
No 100
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.4e-61 Score=499.78 Aligned_cols=492 Identities=22% Similarity=0.287 Sum_probs=395.1
Q ss_pred eEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhC
Q 008535 37 TSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQL 116 (562)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 116 (562)
.|+..+++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++..+++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCC-CCC-CCCcccccCCCCCCCCchhhhhhcccCccccCCCC
Q 008535 117 EAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPEC-DHY-QPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPN 194 (562)
Q Consensus 117 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (562)
++++++++....+.+...... ...++...+. +.. .............+...+.++...... ....
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 149 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPA---------GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDGP 149 (509)
T ss_pred CCcEEEEccchhhhhhhhhhc---------ccceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCCC
Confidence 999999988766654332211 0111111110 000 000000000011223445444332211 1123
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhH---HHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGA---YLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT 271 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l---~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~ 271 (562)
..+++++++|||||||.||+|.++|.+. ..........+++..++++++..|++|..+....+.++..|+++++.+.
T Consensus 150 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~ 229 (509)
T PRK12406 150 PVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPR 229 (509)
T ss_pred CCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccC
Confidence 4679999999999999999999877653 3333344456788899999999999999888777778888999988888
Q ss_pred CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc--cccccccceEEEEEeCCCChHHHHHHHHh-cCCeeeccccCcccc
Q 008535 272 VSAKIIFDSILIHKVTHLCGQPRILNMIANASA--SDQNQLQRKVIIVIAGVLPTIEVLEQVAN-FGFNIRHAYGMTEVL 348 (562)
Q Consensus 272 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~~~~l~~~YG~tE~~ 348 (562)
.++..+++.+++++++++.++|.+++.|+.... ....++++++.++.||+++++++.+.+++ ++..+++.||+||++
T Consensus 230 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 309 (509)
T PRK12406 230 FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESG 309 (509)
T ss_pred CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccC
Confidence 899999999999999999999999999987543 22345789999999999999999999985 588999999999998
Q ss_pred CcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh-hhcCCchhhHh
Q 008535 349 GPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML-GYFKNPKATEE 427 (562)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~ 427 (562)
.+++.+.. .....+..+|.+.++. .+++++. ++.+++.+ +.|||+++|+.++. +|++++..+..
T Consensus 310 ~~~~~~~~-----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~ 374 (509)
T PRK12406 310 AVTFATSE-----------DALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAE 374 (509)
T ss_pred ceEecCcc-----------cccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhccc
Confidence 75543211 0011224567777776 7888885 56777665 67999999998775 99999988888
Q ss_pred hhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC
Q 008535 428 AFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR 507 (562)
Q Consensus 428 ~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~ 507 (562)
.+.+|||+|||++++|++|.+++.||.+|+||++|.+|+|.+||+.|.++++|.++++++.++...++.+++++++.++.
T Consensus 375 ~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 454 (509)
T PRK12406 375 IDRGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGA 454 (509)
T ss_pred ccCCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999988888999999987766
Q ss_pred CCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhh
Q 008535 508 EASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 508 ~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
....+++++++++.++.+++|..+.+. ++|+|++||++|++|++.+...
T Consensus 455 ~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 455 TLDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred CCCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 667899999999999999999988755 5999999999999999887654
No 101
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=5.2e-62 Score=482.40 Aligned_cols=517 Identities=21% Similarity=0.245 Sum_probs=406.1
Q ss_pred CCCCCChHHHHHHHHHHcCCceEEEECC--------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Q 008535 16 NNVPLTPIDFLERAAHVYGDATSIIYGT--------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLH 87 (562)
Q Consensus 16 ~~~~~ti~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 87 (562)
...+.|+++.+.+.+..+|+.+++-... ..+||+|.++++.+++..|.++|+++++.|+|+.-|++||+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 4577899999999999999999886532 56899999999999999999999999999999999999999999
Q ss_pred HHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec-cchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 88 FAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY-QFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
+||...|.+.|||..+.+++.+.++++.+.+.++|++. +..+.+.+....... ..+..++.+++....... .
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~----~~LK~iI~~~~~~~~~~~---~ 223 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSL----PSLKAIIQLDEPSDELKE---K 223 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccC----ccceeEEEecCCchhhhh---h
Confidence 99999999999999999999999999999999999994 444444443332111 114566666655422110 0
Q ss_pred cCCCCCCCCchhhhhhcccCccccC-CCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHH---hhc---CCCCCC
Q 008535 167 ANNFPSGSLDYNDLLEMGKADFEMM-QPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQI---SRC---DVRDMP 239 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~---~~~---~~~~~~ 239 (562)
.......+.+|.++.+.+....... .+..++|.|.|.|||||||.||||++||+|+.+...... ... .....|
T Consensus 224 ~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~d 303 (691)
T KOG1256|consen 224 AENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDD 303 (691)
T ss_pred hhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCc
Confidence 1111123688999999886555444 578899999999999999999999999999988654321 111 223369
Q ss_pred eeeeecccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc-------------
Q 008535 240 VFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASD------------- 306 (562)
Q Consensus 240 ~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~------------- 306 (562)
++++.+||.|++....-......|+.+.+.+ -|+..+.+.+++.+||++.++|.+|+++.+.....
T Consensus 304 v~lSyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~ 382 (691)
T KOG1256|consen 304 VYLSYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFN 382 (691)
T ss_pred eEEEeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 9999999999999988777778888888776 58889999999999999999999999886532100
Q ss_pred -------------cccc-------------------cceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcccc
Q 008535 307 -------------QNQL-------------------QRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPAIV 353 (562)
Q Consensus 307 -------------~~~l-------------------~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~~~ 353 (562)
+... ..+|.+++|++|++.++...++ .+|++++++||+|||++.++.
T Consensus 383 ~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~ 462 (691)
T KOG1256|consen 383 FAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTL 462 (691)
T ss_pred HHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEe
Confidence 0001 2688999999999999999999 568999999999999866555
Q ss_pred cccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccc
Q 008535 354 RQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNG 432 (562)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g 432 (562)
.... ......+|.|.++. .++++|+.+.+-.+.+. .|||+|+|+++|+|||++|+.|.+.| .||
T Consensus 463 ~~~~------------d~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~~--~GEIcirG~~Vf~GYyK~p~~T~e~ideDG 527 (691)
T KOG1256|consen 463 TLPG------------DNVLGSVGPPVPGN-EVKLVDVPEMNYDADGS--KGEICVRGPNVFMGYYKDPEKTAEAIDEDG 527 (691)
T ss_pred ccCC------------CCCCCCcCCcccCc-eEEEechHHhCcCcCCC--cceEEEecchhceeccCChHHHhhhhcccc
Confidence 4321 11446778888887 88888876655555553 49999999999999999999999999 699
Q ss_pred eeeeCceeEEcCCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC-
Q 008535 433 WYHTGDLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS- 510 (562)
Q Consensus 433 ~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~- 510 (562)
|++|||+|+|+++|.++++||.+++|| ..|++|.|..||++..+.+.|.+.+|.+.... ..++++|++++.....
T Consensus 528 WLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~ 604 (691)
T KOG1256|consen 528 WLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSW 604 (691)
T ss_pred ccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhh
Confidence 999999999999999999999999999 89999999999999999999999999975543 4589999986542110
Q ss_pred ------HHHHHHHH-----------------h-ccCCCCCCCcEEEeeccc-------CCCCCcchHHHHhhhhhhhcc
Q 008535 511 ------PEELVTFC-----------------G-DELPSCMVPRAIFFEDIP-------VNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 511 ------~~~l~~~~-----------------~-~~l~~~~~p~~i~~~~lP-------~t~~GKv~r~~l~~~~~~~~~ 558 (562)
..+..++| + ..+..+.....|.+.+-| +||+-|+.|..+.+.|.++-+
T Consensus 605 a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id 683 (691)
T KOG1256|consen 605 AAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQID 683 (691)
T ss_pred HHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHH
Confidence 01111111 1 124455555666665533 688999999999999988753
No 102
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-61 Score=501.08 Aligned_cols=455 Identities=18% Similarity=0.187 Sum_probs=344.0
Q ss_pred cCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccc------hHHHHHHHhhcCCCCcCCCCCce
Q 008535 77 APNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQF------VEVVQNALDILSPNHKCDKAPLL 150 (562)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 150 (562)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+........ ...+
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-------~~~i 73 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAP-------AKAI 73 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhccc-------ceEE
Confidence 589999999999999999999999999999999999999999999998643 122222111100 1111
Q ss_pred eccCCCCCCCCCcccccCCCCCCCCchhhhhhcccC------ccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHH
Q 008535 151 VTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKA------DFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYL 224 (562)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~ 224 (562)
+........ ......+..++.++...... .........++|+++|+|||||||.||||.+||+++..
T Consensus 74 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~ 146 (499)
T PLN03051 74 VLPAAGEPV-------AVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLR 146 (499)
T ss_pred EEeccCccc-------CCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHH
Confidence 111100000 00000112344544421110 00011112458999999999999999999999999877
Q ss_pred HHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcc
Q 008535 225 NSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANAS 303 (562)
Q Consensus 225 ~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~ 303 (562)
+.......+++..+|++++.+|++|.+++...+.++..|+++++.+ .+++..+++.|+++++|++.++|++++.|++..
T Consensus 147 ~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~ 226 (499)
T PLN03051 147 CASDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTG 226 (499)
T ss_pred HHHHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcC
Confidence 6666666778889999999999999999887788889999998886 478899999999999999999999999998754
Q ss_pred c--cccccccceEEEEEeCCCChHHHHHHHHh-c--CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCc
Q 008535 304 A--SDQNQLQRKVIIVIAGVLPTIEVLEQVAN-F--GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGL 378 (562)
Q Consensus 304 ~--~~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 378 (562)
. ....+++++|.+++||++++++..+++++ + +.++++.||+||+++.+..... . .......+|.
T Consensus 227 ~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~--~---------~~~~~~~~G~ 295 (499)
T PLN03051 227 AFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL--L---------QPQAPGAFST 295 (499)
T ss_pred ccccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc--c---------CCCCCccccC
Confidence 3 33456789999999999999998887775 3 4789999999998654332110 0 0111245777
Q ss_pred cccccccceecccCCcccccCCCCceeEEEEcchhh--hhhhcCCchhhHhhhccc----------eeeeCceeEEcCCC
Q 008535 379 NNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTV--MLGYFKNPKATEEAFRNG----------WYHTGDLAVRNPDG 446 (562)
Q Consensus 379 ~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~g----------~~~TGD~~~~~~~g 446 (562)
|.++. .++|+|. ++++++.|.++.|||+++|+.+ +.||++++. + ..|.+| ||+|||+|++|+||
T Consensus 296 p~~~~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~-~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG 371 (499)
T PLN03051 296 ASLGT-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-D-KVYYKGMPMYGSKGMPLRRHGDIMKRTPGG 371 (499)
T ss_pred CCCCc-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-c-ceeeecCCccccCCcceeecCCeEEECCCC
Confidence 77777 7888885 6777877654679999999976 579997653 3 234344 68999999999999
Q ss_pred cEEEeccccceeecCCeEechHHHHHHHhc-CCCceeEEEEeeeCCCCC-ceeEEEE---EeCCCC-CCCHHHHHHHH--
Q 008535 447 YVQMKDRRKDIIISGAEIISSLEVEAVLLS-NPKVLEAAVVGKVDDQLK-EVPVAFV---KLKEGR-EASPEELVTFC-- 518 (562)
Q Consensus 447 ~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~-~~~v~~v---~~~~~~-~~~~~~l~~~~-- 518 (562)
++++.||.||+||++|.+|+|.|||++|.+ ||.|.+++|++++++..+ +.++++| +++++. ..+.++++++|
T Consensus 372 ~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~ 451 (499)
T PLN03051 372 YFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQE 451 (499)
T ss_pred cEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHH
Confidence 999999999999999999999999999996 999999999999999888 6888888 766654 34566777665
Q ss_pred --hccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcccc
Q 008535 519 --GDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAVGW 560 (562)
Q Consensus 519 --~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~~~ 560 (562)
+++++.+..|..+.+++ ||+|++||++|++|++.+.+..++-
T Consensus 452 ~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~ 496 (499)
T PLN03051 452 AIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELSGR 496 (499)
T ss_pred HHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhccc
Confidence 45577766665666554 9999999999999999888776654
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-60 Score=496.68 Aligned_cols=492 Identities=23% Similarity=0.299 Sum_probs=395.0
Q ss_pred HHHHHHHcCCceEEEE--CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC
Q 008535 26 LERAAHVYGDATSIIY--GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR 103 (562)
Q Consensus 26 l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 103 (562)
...+++.+|+++|+.+ .+..+||.||.+++.++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3567889999999987 46789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhc
Q 008535 104 LDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEM 183 (562)
Q Consensus 104 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (562)
++.+++.++++.++++.++++....+.+......... ....+.+...... .+...+.+....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~------------~~~~~~~~~~~~ 144 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPG------VRHRLVLDGDGEL------------EGFVGYAEAVAG 144 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCC------ceEEEEecCCCCC------------cccccHHHHhcC
Confidence 9999999999999999999998776665544332211 1111222111000 011222222221
Q ss_pred ccCccccCCCCCCCCceEEEeccCCCCCCCceEee--chhHHH---HHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 184 GKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYS--HRGAYL---NSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 184 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t--~~~l~~---~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
.+. ....+.++.++++|||||||.||+|.++ |.++.. ........+++...+++++..|++|.+++...+.
T Consensus 145 ~~~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~ 220 (511)
T PRK13391 145 LPA----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVML 220 (511)
T ss_pred CCC----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHH
Confidence 111 1112344678999999999999999964 555432 2233445667888999999999999999888888
Q ss_pred hHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHHh-cC
Q 008535 259 MAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVAN-FG 335 (562)
Q Consensus 259 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~~ 335 (562)
++..|+++++.+.+++..+++.++++++|++.++|.++..+...... ....+++++.+++||+++++++.+.+++ ++
T Consensus 221 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g 300 (511)
T PRK13391 221 VIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWG 300 (511)
T ss_pred HHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcC
Confidence 89999999998889999999999999999999999999988765432 2335789999999999999999999884 68
Q ss_pred CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhh
Q 008535 336 FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVM 415 (562)
Q Consensus 336 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 415 (562)
..+++.||+||+++++...... .......+|.+.++ .+++++. ++.+++.| +.|||+++|+ ++
T Consensus 301 ~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~ 363 (511)
T PRK13391 301 PIIHEYYAATEGLGFTACDSEE-----------WLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RP 363 (511)
T ss_pred CceeeeeccccccceEEecCcc-----------ccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cc
Confidence 8899999999998754432100 01122456766665 3667764 56666655 6799999999 88
Q ss_pred hhhcCCchhhHhhhc--cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCC
Q 008535 416 LGYFKNPKATEEAFR--NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQL 493 (562)
Q Consensus 416 ~gy~~~~~~~~~~~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 493 (562)
.||+++++.+...|. ++||+|||+|+++++|.+++.||.+|+++++|.+++|.+||++|.++|.|.+++|++.++...
T Consensus 364 ~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~ 443 (511)
T PRK13391 364 FEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDL 443 (511)
T ss_pred eEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCccc
Confidence 899999998888775 389999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceeEEEEEeCCCCC---CCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhhhhh
Q 008535 494 KEVPVAFVKLKEGRE---ASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 494 ~~~~v~~v~~~~~~~---~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
++.+++++++.++.. ...+++.++++++++.+++|..+.+. ++|+|++||++|+.|++.|.+.
T Consensus 444 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 444 GEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred CceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhcc
Confidence 888999888765432 23478999999999999999998865 5999999999999999988653
No 104
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-60 Score=496.33 Aligned_cols=484 Identities=24% Similarity=0.333 Sum_probs=391.5
Q ss_pred ceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhh
Q 008535 36 ATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQ 115 (562)
Q Consensus 36 ~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 115 (562)
++++.+.+..+||.||.+.+.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~ 81 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDD 81 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhc
Confidence 35677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCC
Q 008535 116 LEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNH 195 (562)
Q Consensus 116 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (562)
+++++++++....+.+.......... ...+...+... .....+.+....... .....
T Consensus 82 ~~~~~ii~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------~~~~~~~~~~~~~~~----~~~~~ 138 (502)
T PRK08276 82 SGAKVLIVSAALADTAAELAAELPAG-----VPLLLVVAGPV--------------PGFRSYEEALAAQPD----TPIAD 138 (502)
T ss_pred CCCCEEEEccchhhHHHHHhhhcccc-----ccEEEEeCCCC--------------CccccHHHHHhcCCC----CCCCC
Confidence 99999999988776665443322110 12222221100 111233333322111 11234
Q ss_pred CCCceEEEeccCCCCCCCceEeechhHHHHH------HHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEe
Q 008535 196 ECDPISVNYTSGSTGDPKGVVYSHRGAYLNS------LAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCI 269 (562)
Q Consensus 196 ~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~------~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~ 269 (562)
.++.++++|||||||.||+|.++|.++.... ............+++++..|++|.+++...+.++..|+++++.
T Consensus 139 ~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~ 218 (502)
T PRK08276 139 ETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVM 218 (502)
T ss_pred CCcceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEc
Confidence 5678999999999999999999988754322 1122222335678899999999999988888888899999888
Q ss_pred ccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc--ccccccceEEEEEeCCCChHHHHHHHHh-cCCeeeccccCcc
Q 008535 270 RTVSAKIIFDSILIHKVTHLCGQPRILNMIANASAS--DQNQLQRKVIIVIAGVLPTIEVLEQVAN-FGFNIRHAYGMTE 346 (562)
Q Consensus 270 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~i~~~g~~l~~~~~~~~~~-~~~~l~~~YG~tE 346 (562)
+.+++..+++.++++++|++.++|.+++.+++.... ...+++++|.++++|++++.++.+.+.+ ++..+++.||+||
T Consensus 219 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE 298 (502)
T PRK08276 219 EKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSE 298 (502)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhccccc
Confidence 889999999999999999999999999999876532 2345789999999999999999999984 5888999999999
Q ss_pred ccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhH
Q 008535 347 VLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATE 426 (562)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 426 (562)
++++++..... .......+|.+. .. .+++.+. .+.+++.+ +.|||+++|+.++.||++++..+.
T Consensus 299 ~~~~~~~~~~~-----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~ 362 (502)
T PRK08276 299 GGGVTVITSED-----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTA 362 (502)
T ss_pred ccceeEecCcc-----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHH
Confidence 98765543210 011223567776 44 7788774 56666655 779999999999999999999998
Q ss_pred hhhcc-ceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCC
Q 008535 427 EAFRN-GWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKE 505 (562)
Q Consensus 427 ~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~ 505 (562)
..|.+ |||+|||+++++++|.+++.||.||+++++|.++++.+||..++++|+|.++++++..++..++.+++++++.+
T Consensus 363 ~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 442 (502)
T PRK08276 363 AARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPAD 442 (502)
T ss_pred HHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECC
Confidence 88865 99999999999999999999999999999999999999999999999999999999999988999999999876
Q ss_pred CCCCC---HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcc
Q 008535 506 GREAS---PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 506 ~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
+.... .+++.++++++++.+++|..+++++ ||+|++||++|++|++.|-+..+
T Consensus 443 ~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 443 GADAGDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred CCCCChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhhh
Confidence 54333 3489999999999999999988655 99999999999999999776543
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.6e-61 Score=596.73 Aligned_cols=490 Identities=21% Similarity=0.187 Sum_probs=408.5
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..+++++|+++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++|++|+++++++++++++++||+++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++|.++.+++.++++.+++++++++....+........+.... .+.++..++..
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--------------------- 3853 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN----RPRLLVWEEVQ--------------------- 3853 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc----ccceeeecccc---------------------
Confidence 99999999999999999999999999876554433322211100 11111111100
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
..............+++.+||+|||||||.||||+++|+++.....+....+++.+.|+++...++++..++...+.
T Consensus 3854 ---~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~ 3930 (4334)
T PRK05691 3854 ---AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLA 3930 (4334)
T ss_pred ---cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHH
Confidence 00000011112346789999999999999999999999999999999889999999999999999999999999999
Q ss_pred hHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhc-
Q 008535 259 MAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANF- 334 (562)
Q Consensus 259 ~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~- 334 (562)
+++.|+++++.+. .++..+.+.++++++|++..+|++++.++... ...++++|.+++|||+++.+..+.|.+.
T Consensus 3931 ~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~ 4007 (4334)
T PRK05691 3931 APLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRY 4007 (4334)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhC
Confidence 9999999998764 57899999999999999999999999887542 2457889999999999999999998743
Q ss_pred -CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchh
Q 008535 335 -GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANT 413 (562)
Q Consensus 335 -~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~ 413 (562)
++++++.||+|||+..++........ .......+|.|.++. .+.|++. .++++|.| ..|||+|+|+.
T Consensus 4008 ~~~~l~n~YG~TE~t~~~~~~~~~~~~--------~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~ 4075 (4334)
T PRK05691 4008 PQIGLVNAYGPAECSDDVAFFRVDLAS--------TRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTG 4075 (4334)
T ss_pred CCCeEEeCccCccceeEEEEEEccccc--------ccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEeccc
Confidence 78999999999998766544321110 011124578887776 7778774 67778777 77999999999
Q ss_pred hhhhhcCCchhhHhhhc--------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 414 VMLGYFKNPKATEEAFR--------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 414 ~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
+++||+++|+.|.++|. ++||||||+|++++||.++++||.|++||++|.+|.+.|||+.|.++|+|.+++|
T Consensus 4076 v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v 4155 (4334)
T PRK05691 4076 VGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAV 4155 (4334)
T ss_pred ccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEE
Confidence 99999999999999982 4699999999999999999999999999999999999999999999999999988
Q ss_pred EeeeCCCCCceeEEEEEeCCCCCC---CHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhh
Q 008535 486 VGKVDDQLKEVPVAFVKLKEGREA---SPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGK 552 (562)
Q Consensus 486 ~~~~~~~~~~~~v~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~ 552 (562)
+... ...++.++++++....... ..+++++++++.||.|++|..+... .||+|+|||++|++|++.
T Consensus 4156 ~~~~-~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4156 AVQE-GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred EEec-CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 6554 3456788999987654322 2468999999999999999988754 599999999999999876
No 106
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-60 Score=523.82 Aligned_cols=493 Identities=15% Similarity=0.143 Sum_probs=375.4
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
....|+.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|++|. +++.++++.++++++|++.+..+.+... ...++.++...... ..... ......
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~------------~~~iiv~~~~~~~~---~~~~~--~~~~~~ 583 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL------------PGRVLVLGGGESRD---LDLPD--DADVID 583 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc------------CceEEEecCCcccc---ccCCc--chhhhh
Confidence 9999985 5789999999999999987665543221 12233332211000 00000 000011
Q ss_pred hhhhhhcccCccc--cCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhH
Q 008535 177 YNDLLEMGKADFE--MMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWC 254 (562)
Q Consensus 177 ~~~~~~~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~ 254 (562)
+.+.......... ...+..++|+++|+|| ||||.||++.++|.+...........+.+..+|++++.+|++|.+++.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~ 662 (994)
T PRK07868 584 MEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLL 662 (994)
T ss_pred hhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHH
Confidence 1111110000000 0112235799999998 688888888888877665555555667888999999999999999998
Q ss_pred HHHHhHhhceEEEE-eccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh
Q 008535 255 CTWAMAAVGGINVC-IRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN 333 (562)
Q Consensus 255 ~~~~~~~~g~~~v~-~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~ 333 (562)
..+.+++.+++.++ .+.++++.+++.|+++++|+++.+|++++.|++........++++|.++. +.++++..+.+.+
T Consensus 663 ~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~ 740 (994)
T PRK07868 663 VSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVE 740 (994)
T ss_pred HHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHH
Confidence 76666666665554 45689999999999999999999999999998865444456778998763 3488999988884
Q ss_pred -cC-CeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecc----------cCCc--ccccC
Q 008535 334 -FG-FNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQ----------QNTM--KSVPH 399 (562)
Q Consensus 334 -~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~----------~~~~--~~~~~ 399 (562)
++ .++++.||+||++...... . .....++|.|.++...++|.+ .+++ +.++
T Consensus 741 ~~~~~~l~~~YG~TE~~~~~~~~---~-----------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~- 805 (994)
T PRK07868 741 AFAPAHVVEFFATTDGQAVLANV---S-----------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAE- 805 (994)
T ss_pred HhCchheeeeeeccccccccccc---C-----------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcC-
Confidence 54 7899999999986432211 0 012245677777653344431 1233 2333
Q ss_pred CCCceeEEEEcchhhhhhhcCCchhhHh--hh--ccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHh
Q 008535 400 DGKTLGEVMFRANTVMLGYFKNPKATEE--AF--RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLL 475 (562)
Q Consensus 400 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~--~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 475 (562)
.++.|||+++++.. + ++..+.. .| .+|||+|||+|++|+||+++|+||.||+||++|.+|+|.+||++|.
T Consensus 806 -~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~ 879 (994)
T PRK07868 806 -VNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG 879 (994)
T ss_pred -CCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh
Confidence 34789999999753 2 2333222 23 3799999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhh
Q 008535 476 SNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 476 ~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~ 554 (562)
+||.|.+++|++++++. ++.++++|++.++...+.++|++++++ ++.|++|+.+++++ ||+|++||++|++|++.-.
T Consensus 880 ~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 880 RIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred cCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 99999999999998875 678899999888777788999999986 99999999988765 9999999999999987754
Q ss_pred h
Q 008535 555 A 555 (562)
Q Consensus 555 ~ 555 (562)
.
T Consensus 958 p 958 (994)
T PRK07868 958 P 958 (994)
T ss_pred C
Confidence 3
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.5e-61 Score=593.82 Aligned_cols=485 Identities=20% Similarity=0.210 Sum_probs=408.5
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
....++.++|+++++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++|++|+++++++++++++++||+++|++
T Consensus 1128 ~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1128 PAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGA 1207 (4334)
T ss_pred CccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCc
Q 008535 97 LSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLD 176 (562)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
++|++|.++.+++.++++.+++++++++......+.... ....+.++...
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~-----------~~~~~~~~~~~------------------- 1257 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE-----------GVSAIALDSLH------------------- 1257 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc-----------CceEEeecccc-------------------
Confidence 999999999999999999999999999876543321100 00111111000
Q ss_pred hhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHH
Q 008535 177 YNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCT 256 (562)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~ 256 (562)
.... . .........++++++++|||||||.||||.++|+++.....+....+++.++++++...|++|..++...
T Consensus 1258 ~~~~----~-~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~ 1332 (4334)
T PRK05691 1258 LDSW----P-SQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWEC 1332 (4334)
T ss_pred cccc----C-CCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHH
Confidence 0000 0 0001112456899999999999999999999999999988888888999999999999999999999889
Q ss_pred HHhHhhceEEEEec---cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHh
Q 008535 257 WAMAAVGGINVCIR---TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVAN 333 (562)
Q Consensus 257 ~~~~~~g~~~v~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~ 333 (562)
+.++..|+++++.+ ..++..+.+.++++++|++..+|++++.|..... ...++++|.+++|||+++++..+.|.+
T Consensus 1333 ~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~ 1410 (4334)
T PRK05691 1333 FWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQ 1410 (4334)
T ss_pred HHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHH
Confidence 99999999999875 3689999999999999999999999999986542 246789999999999999999999874
Q ss_pred -c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcc
Q 008535 334 -F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRA 411 (562)
Q Consensus 334 -~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 411 (562)
+ +.++++.||+||++..++....... ......+|.|.++. .++|+|. .++.++.| +.|||+|+|
T Consensus 1411 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~----------~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G 1476 (4334)
T PRK05691 1411 RLPQVQLHNRYGPTETAINVTHWQCQAE----------DGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGELCIGG 1476 (4334)
T ss_pred hCCCcEEEeCCCcChheeeeeeeecccc----------cCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceEEEecC
Confidence 3 6899999999999766554321110 11123577777776 7888875 57777776 779999999
Q ss_pred hhhhhhhcCCchhhHhhhc--------cceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeE
Q 008535 412 NTVMLGYFKNPKATEEAFR--------NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEA 483 (562)
Q Consensus 412 ~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 483 (562)
+.+++||+++++.+.+.|. .+||+|||+|++++||.++++||.||+||++|.+|+|.+||.+|.++|+|.++
T Consensus 1477 ~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a 1556 (4334)
T PRK05691 1477 AGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQA 1556 (4334)
T ss_pred cccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceE
Confidence 9999999999999999883 24999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEee-cccCCCCCcchHHHHhhhh
Q 008535 484 AVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFE-DIPVNSTGKVQKFVLRGKV 553 (562)
Q Consensus 484 ~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~-~lP~t~~GKv~r~~l~~~~ 553 (562)
+|+...+. .++.++++++...+.....+++++++++++|.|++|..+++. +||+|++||++|++|++..
T Consensus 1557 ~v~~~~~~-~~~~lva~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~~ 1626 (4334)
T PRK05691 1557 AVLVREGA-AGAQLVGYYTGEAGQEAEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEPV 1626 (4334)
T ss_pred EEEEeeCC-CCCEEEEEEEeCCCCCCCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCccc
Confidence 99876554 457899999887766667789999999999999999988855 5999999999999997643
No 108
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-60 Score=504.12 Aligned_cols=500 Identities=19% Similarity=0.236 Sum_probs=369.0
Q ss_pred CChHHHHHHHHHHcCCceEEEECC---------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGT---------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
+++.++|++++..+|+++|+.+.+ +++||+||++++.++|+.|.++| ++||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 468899999999999999998632 68999999999999999999999 68999999999999999999999
Q ss_pred hhccceEEecCC---CCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCccccc
Q 008535 91 PMAGAVLSALNT---RLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVA 167 (562)
Q Consensus 91 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
+++|++++|+++ ..+.+++.++++++++++++++.+..+.+........... ...++.++...
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---------- 145 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQS----APPVIEVDLLD---------- 145 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhccccc----ccceEeecccc----------
Confidence 999999999997 4578899999999999999999877665544322111000 11122111100
Q ss_pred CCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc-C-----CCCCCee
Q 008535 168 NNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC-D-----VRDMPVF 241 (562)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~-----~~~~~~~ 241 (562)
+..... .......++++++++|||||||.||||.++|+++..+.......+ . ...++++
T Consensus 146 ------------~~~~~~---~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (578)
T PRK05850 146 ------------LDSPRG---SDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTV 210 (578)
T ss_pred ------------cccCCc---cccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceE
Confidence 000000 001123467999999999999999999999999988766554332 2 3457889
Q ss_pred eeecccccchhhHH-HHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc---cccccccce
Q 008535 242 LWTLDMFRCNGWCC-TWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASA---SDQNQLQRK 313 (562)
Q Consensus 242 l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~l 313 (562)
++++|++|.+|+.. .+.+++.|+++++.++ .++..+++.++++++++....+..+..+..... .....++++
T Consensus 211 l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l 290 (578)
T PRK05850 211 VSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDDDMAGLDLGGV 290 (578)
T ss_pred EEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEeCCcHHHHHHHHhcchhhhcCcchhhh
Confidence 99999999999864 6777888888888764 278999999999999866544444444433221 122356789
Q ss_pred EEEEEeCCCChHHHHHHHHh-c---C---CeeeccccCccccCcccccccCCCCCCCcCCc----cc---------cccc
Q 008535 314 VIIVIAGVLPTIEVLEQVAN-F---G---FNIRHAYGMTEVLGPAIVRQWKPEGESSALDH----EH---------EMTK 373 (562)
Q Consensus 314 ~~i~~~g~~l~~~~~~~~~~-~---~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~----~~---------~~~~ 373 (562)
|.++.||++++++..++|.+ + + ..+++.||+||++..+................ .. ....
T Consensus 291 r~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 370 (578)
T PRK05850 291 LGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPL 370 (578)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceE
Confidence 99999999999999888863 3 2 36899999999875443322111000000000 00 0000
Q ss_pred cccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhc------------cceeeeCceeE
Q 008535 374 HREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFR------------NGWYHTGDLAV 441 (562)
Q Consensus 374 ~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~~~ 441 (562)
...|.|. ...+++++.+++.+++.| +.|||+|+|+.++.||+++++.+.+.|. +|||+|||+|+
T Consensus 371 ~~~g~p~--~~~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 371 VSYGSPR--SPTVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred EeccCCC--CCEEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 1222222 236777776666777666 7899999999999999999999998883 47999999999
Q ss_pred EcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC------HHHHH
Q 008535 442 RNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS------PEELV 515 (562)
Q Consensus 442 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~------~~~l~ 515 (562)
++ +|++++.||.+|+||++|++|+|.+||++|.+++.+ +++|++++++ .++.++++|+++++...+ ..+++
T Consensus 447 ~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~ 523 (578)
T PRK05850 447 IS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVK 523 (578)
T ss_pred EE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHH
Confidence 98 999999999999999999999999999999999985 4788888876 678899999987654332 23556
Q ss_pred HHHhccCCCC--CCCcEEEee---cccCCCCCcchHHHHhhhhhhh
Q 008535 516 TFCGDELPSC--MVPRAIFFE---DIPVNSTGKVQKFVLRGKVNAT 556 (562)
Q Consensus 516 ~~~~~~l~~~--~~p~~i~~~---~lP~t~~GKv~r~~l~~~~~~~ 556 (562)
+.+...++.+ ..|..+.++ .||+|++||++|++|++.|.+.
T Consensus 524 ~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 524 REVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 6655544432 245555443 4999999999999999998764
No 109
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.3e-60 Score=540.08 Aligned_cols=497 Identities=22% Similarity=0.234 Sum_probs=392.3
Q ss_pred CCCChHHHHHHHHHHcC-CceEEEE-CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc
Q 008535 18 VPLTPIDFLERAAHVYG-DATSIIY-GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA 95 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 95 (562)
...++.+.+.++++++| ++.++.+ .++++||+||+++++++|+.|.+ |+++||+|+++++|+++++++++||+++|+
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 45678888988888886 5677776 36789999999999999999975 999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHH--HHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCC
Q 008535 96 VLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQ--NALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSG 173 (562)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (562)
+++|+++..+.+++.++++++++++++++++..+... .....+.. ...++.+++.... . ..
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~----------~-~~ 770 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEF------GIRIIYLEDVRAQ----------I-GL 770 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhcc------CceEEEehHhhcc----------C-Ch
Confidence 9999999999999999999999999999876543221 11111110 1222322211100 0 00
Q ss_pred CCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhh
Q 008535 174 SLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGW 253 (562)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl 253 (562)
...+.+.......... ..+..++|+++++|||||||.||||.+||+++..+.......+++.++|++++.+|++|.+++
T Consensus 771 ~~~~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 849 (1140)
T PRK06814 771 ADKIKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGL 849 (1140)
T ss_pred HHHHHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHH
Confidence 0001111111111100 112467899999999999999999999999999888888888899999999999999999998
Q ss_pred -HHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHH
Q 008535 254 -CCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 254 -~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~ 331 (562)
...+.++..|+++++.+. .+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++||++++++..+.+
T Consensus 850 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~ 927 (1140)
T PRK06814 850 TGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTW 927 (1140)
T ss_pred HHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHH
Confidence 456677888888887764 56778889999999999999999999987753 33567899999999999999999998
Q ss_pred H-hcCCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEc
Q 008535 332 A-NFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFR 410 (562)
Q Consensus 332 ~-~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~ 410 (562)
+ .++.++++.||+||++..+...... ......+|.|.++. .+++.+.+ + .++.|||+++
T Consensus 928 ~~~~~~~~~~~YG~TE~~~~~~~~~~~------------~~~~~~vG~p~~g~-~~~~~~~~-~------~~~~Gel~v~ 987 (1140)
T PRK06814 928 MEKFGIRILEGYGVTETAPVIALNTPM------------HNKAGTVGRLLPGI-EYRLEPVP-G------IDEGGRLFVR 987 (1140)
T ss_pred HHHhCCcEEeccccccccceEEecCCC------------CCCCCcCCccCCCC-eEEEeecC-C------CCCceEEEEe
Confidence 7 5689999999999998765442110 11234567777766 66665532 1 1256999999
Q ss_pred chhhhhhhcCCchhhH-hhhccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeee
Q 008535 411 ANTVMLGYFKNPKATE-EAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKV 489 (562)
Q Consensus 411 ~~~~~~gy~~~~~~~~-~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 489 (562)
|++++.||++++.... ..+.+|||+|||+|++|+||++++.||.||+||++|++|+|.+||+++.+++.+.+++|++++
T Consensus 988 g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~ 1067 (1140)
T PRK06814 988 GPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIP 1067 (1140)
T ss_pred CCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcc
Confidence 9999999998764332 223589999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEeCCCCCCCHHHHHHHHhcc-CCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhcc
Q 008535 490 DDQLKEVPVAFVKLKEGREASPEELVTFCGDE-LPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 490 ~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
++..++.+++++. ..+.+.+++.+++++. ++.+++|+.+.+.+ +|+|++||++|++|++++++...
T Consensus 1068 ~~~~g~~~~~~~~---~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 1135 (1140)
T PRK06814 1068 DARKGERIILLTT---ASDATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAA 1135 (1140)
T ss_pred cCCCCceEEEEEc---CCCcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhc
Confidence 9988888777654 2345678999999864 99999999987554 99999999999999999887653
No 110
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-61 Score=455.37 Aligned_cols=522 Identities=19% Similarity=0.241 Sum_probs=414.3
Q ss_pred ccCCCCCChHHHHHHHHHHcCCceEEEECC-----------------------eeccHHHHHHHHHHHHHHHHHcCCCCC
Q 008535 14 SANNVPLTPIDFLERAAHVYGDATSIIYGT-----------------------VRFSWRQTHQICLKLASALAQLKISRG 70 (562)
Q Consensus 14 ~~~~~~~ti~~~l~~~a~~~p~~~a~~~~~-----------------------~~~Ty~el~~~~~~~a~~L~~~gv~~g 70 (562)
.......|+.+++++.++.+.++.++-..+ ..+||.|+++++.++|.+|.+.|++++
T Consensus 35 ~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~ 114 (678)
T KOG1180|consen 35 PPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPK 114 (678)
T ss_pred CCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCC
Confidence 344456699999999999999998875311 357999999999999999999999987
Q ss_pred CE-EEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCc
Q 008535 71 DI-VAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPL 149 (562)
Q Consensus 71 d~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (562)
++ ++++++.+.+|+++++||++.+..+|.+..++..+.+.+-|++++++.+||+.+.++.+....+.... ...
T Consensus 115 e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~------vk~ 188 (678)
T KOG1180|consen 115 ETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKT------VKH 188 (678)
T ss_pred CCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCc------eeE
Confidence 77 99999999999999999999999999999999999999999999999999999988876665554332 456
Q ss_pred eeccCCCCCCCCCcccccC-CCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHH
Q 008535 150 LVTIPECDHYQPSTCSVAN-NFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLA 228 (562)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~ 228 (562)
++..+.............. .......+++++++.++.....+.+..++|+|+|+|||||||.||||+++|.|+.+....
T Consensus 189 II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G 268 (678)
T KOG1180|consen 189 IIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTG 268 (678)
T ss_pred EEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhh
Confidence 6666543322111111111 122345788999988877655555567899999999999999999999999999998887
Q ss_pred HHhhc-CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccCCH--------HHHHHHHHhcCeEEEEcchHHHHHH
Q 008535 229 QISRC-DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSA--------KIIFDSILIHKVTHLCGQPRILNMI 299 (562)
Q Consensus 229 ~~~~~-~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~--------~~~~~~i~~~~~t~l~~~p~~~~~l 299 (562)
..... .+++.|+++..+||.|++.+..-+.++..|+.+-..+.... ..---.+..+|||++.++|.++.++
T Consensus 269 ~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drV 348 (678)
T KOG1180|consen 269 VGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRV 348 (678)
T ss_pred hcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHH
Confidence 77665 78999999999999999999999999999988776543211 1122335678999999999999988
Q ss_pred Hhcccccc------------------------------------------ccccceEEEEEeCCCChHHHHHHHH-hcCC
Q 008535 300 ANASASDQ------------------------------------------NQLQRKVIIVIAGVLPTIEVLEQVA-NFGF 336 (562)
Q Consensus 300 ~~~~~~~~------------------------------------------~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~ 336 (562)
.+....+- ..-..+|.+++||++++++..+.+. -+.+
T Consensus 349 rKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~ 428 (678)
T KOG1180|consen 349 RKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCC 428 (678)
T ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccc
Confidence 65321100 0011699999999999999999988 4577
Q ss_pred eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh
Q 008535 337 NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML 416 (562)
Q Consensus 337 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 416 (562)
++.++||.||+++..+...... .....+|.|.+.. .++++|.+++.=.+.+....|||+|+|++++.
T Consensus 429 Pv~qGYGLTEtca~~tv~e~~d------------~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~ 495 (678)
T KOG1180|consen 429 PVLQGYGLTETCAAATVLEPED------------FSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTM 495 (678)
T ss_pred cccccccccchhcccEecChhh------------cccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccCh
Confidence 9999999999998887754322 2223567666666 88888887766555444346999999999999
Q ss_pred hhcCCchhhHhhhc--cc--eeeeCceeEEcCCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCC
Q 008535 417 GYFKNPKATEEAFR--NG--WYHTGDLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDD 491 (562)
Q Consensus 417 gy~~~~~~~~~~~~--~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 491 (562)
|||++++.|++.|. +| ||+|||+|++.+||++.+++|.+|.+| .+|+.|++..+|.+++..|.|.+.+|.+....
T Consensus 496 gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~ 575 (678)
T KOG1180|consen 496 GYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK 575 (678)
T ss_pred hhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc
Confidence 99999999999993 78 999999999999999999999999999 89999999999999999999999999986554
Q ss_pred CCCceeEEEEEeCCCCC--------CCH-----------------HHHHHHH-hccCCCCCCCcEEEeeccc-------C
Q 008535 492 QLKEVPVAFVKLKEGRE--------ASP-----------------EELVTFC-GDELPSCMVPRAIFFEDIP-------V 538 (562)
Q Consensus 492 ~~~~~~v~~v~~~~~~~--------~~~-----------------~~l~~~~-~~~l~~~~~p~~i~~~~lP-------~ 538 (562)
..+|++|++++..- ... +++.+.- .+.|....+|..|++.+.| .
T Consensus 576 ---s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlv 652 (678)
T KOG1180|consen 576 ---SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLV 652 (678)
T ss_pred ---ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCcccc
Confidence 45999999875420 111 2222222 4468899999999988866 4
Q ss_pred CCCCcchHHHHhhhhhhhc
Q 008535 539 NSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 539 t~~GKv~r~~l~~~~~~~~ 557 (562)
|+.-|+.|+.++..|.++-
T Consensus 653 T~A~KLKRk~I~~~~k~ei 671 (678)
T KOG1180|consen 653 TAALKLKRKEILAAYKKEI 671 (678)
T ss_pred HHHHHhhHHHHHHHHHHHH
Confidence 4567999999999998754
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-60 Score=506.99 Aligned_cols=498 Identities=17% Similarity=0.161 Sum_probs=367.7
Q ss_pred CCCChHHHHHHHHHHcCCceEEEECC------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhh
Q 008535 18 VPLTPIDFLERAAHVYGDATSIIYGT------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVP 91 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~ 91 (562)
.+.++.++|+++++.+|+++|+.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+
T Consensus 47 ~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 126 (624)
T PRK12582 47 YPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAM 126 (624)
T ss_pred cccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 46789999999999999999998743 589999999999999999999999999999999999999999999999
Q ss_pred hccceEEecCCCCCH-----HHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 92 MAGAVLSALNTRLDS-----ATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 92 ~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
++|++++|++|.++. +++.++++.++++++|++.... .......+... ...++.+.....
T Consensus 127 ~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~~-----~~~~i~~~~~~~-------- 191 (624)
T PRK12582 127 QAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--FARALAALDLL-----DVTVVHVTGPGE-------- 191 (624)
T ss_pred HcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH--HHHHHHhhhhc-----CceEEEEcCCCc--------
Confidence 999999999999885 8999999999999999986421 11111111100 011222221100
Q ss_pred cCCCCCCCCchhhhhhcccCcc--ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCC---CCee
Q 008535 167 ANNFPSGSLDYNDLLEMGKADF--EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRD---MPVF 241 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~---~~~~ 241 (562)
......+.++........ .......++++++|+|||||||.||||.+||+++..+.......+.... .+++
T Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (624)
T PRK12582 192 ----GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVS 267 (624)
T ss_pred ----ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceE
Confidence 001133444433221110 0111245689999999999999999999999999877665544444443 5789
Q ss_pred eeecccccchhhHH-HHHhHhhceEEEEec-cCCH---HHHHHHHHhcCeEEEEcchHHHHHHHhccccc----cccccc
Q 008535 242 LWTLDMFRCNGWCC-TWAMAAVGGINVCIR-TVSA---KIIFDSILIHKVTHLCGQPRILNMIANASASD----QNQLQR 312 (562)
Q Consensus 242 l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~-~~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~l~~ 312 (562)
+.++|++|.+|+.. ++.++..|+++++.+ .+++ ..+++.++++++|+++++|.+++.|++..... ...+++
T Consensus 268 l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~s 347 (624)
T PRK12582 268 LDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKN 347 (624)
T ss_pred EEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhh
Confidence 99999999999865 445667788887754 2333 35677788999999999999999987653222 234689
Q ss_pred eEEEEEeCCCChHHHHHHHHhc-------CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCcccccccc
Q 008535 313 KVIIVIAGVLPTIEVLEQVANF-------GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQG 385 (562)
Q Consensus 313 l~~i~~~g~~l~~~~~~~~~~~-------~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 385 (562)
+|.+++||+++++++.+.|.+. ++++++.||+||+++++...... ......+|.+.++. .
T Consensus 348 lr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~------------~~~~~svG~p~pg~-~ 414 (624)
T PRK12582 348 LRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD------------TERVGLIGLPLPGV-E 414 (624)
T ss_pred eeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC------------CCCCCCCCcCCCCc-E
Confidence 9999999999999999998853 36799999999997655422110 11234567666665 5
Q ss_pred ceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEE-c---CCCcEEEeccccceee-
Q 008535 386 VDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVR-N---PDGYVQMKDRRKDIII- 459 (562)
Q Consensus 386 ~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~-~---~~g~l~~~GR~~d~i~- 459 (562)
+++++ . |+.|||+|+|+.++.||+++++.+.+.| .+|||+|||+|++ | ++|.+++.||.||+|+
T Consensus 415 v~i~~--------~--G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~ 484 (624)
T PRK12582 415 LKLAP--------V--GDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKL 484 (624)
T ss_pred EEEcc--------C--CCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEec
Confidence 55542 2 2569999999999999999999999888 4899999999998 4 4699999999999999
Q ss_pred cCCeEechHHHH--HHHhcCCCceeEEEEeeeCCCCCceeEEE------EEeCCCC----CCCHHHHHHHHhcc------
Q 008535 460 SGAEIISSLEVE--AVLLSNPKVLEAAVVGKVDDQLKEVPVAF------VKLKEGR----EASPEELVTFCGDE------ 521 (562)
Q Consensus 460 ~~G~~v~~~~iE--~~l~~~~~v~~~~v~~~~~~~~~~~~v~~------v~~~~~~----~~~~~~l~~~~~~~------ 521 (562)
.+|++|+|.+|| .++.+||.|.+++|++.+++..++.++.. +...++. ..+.+++.++++..
T Consensus 485 ~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 564 (624)
T PRK12582 485 STGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNA 564 (624)
T ss_pred CCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHh
Confidence 689999998885 68889999999999998777654332210 1111111 01234565555544
Q ss_pred -CCCCC-CCcEEEeec-cc------CCCCCcchHHHHhhhhhhhc
Q 008535 522 -LPSCM-VPRAIFFED-IP------VNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 522 -l~~~~-~p~~i~~~~-lP------~t~~GKv~r~~l~~~~~~~~ 557 (562)
++.+. +|+++.+.+ +| +|++||+.|+.+.+.|++.-
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i 609 (624)
T PRK12582 565 EAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALV 609 (624)
T ss_pred hcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHH
Confidence 45554 998887655 44 77888999999988888764
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=6e-60 Score=483.38 Aligned_cols=435 Identities=25% Similarity=0.371 Sum_probs=362.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 47 SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 47 Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+..+++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEecc
Q 008535 127 FVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTS 206 (562)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 206 (562)
..... . ... .+..+................+++++++|||
T Consensus 81 ~~~~~------~----------~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 120 (436)
T TIGR01923 81 LEEKD------F----------QAD------------------------SLDRIEAAGRYETSLSASFNMDQIATLMFTS 120 (436)
T ss_pred ccccc------e----------eec------------------------chHhhhhcccccccccccCCcCceEEEEeCC
Confidence 32100 0 000 0000000000000011123457899999999
Q ss_pred CCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCe
Q 008535 207 GSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKV 286 (562)
Q Consensus 207 GtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~ 286 (562)
||||.||+|.++|+++..........++++++|++++..|++|.+++...+.++..|+++++.+.++ .+++.++++++
T Consensus 121 GtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~ 198 (436)
T TIGR01923 121 GTTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERV 198 (436)
T ss_pred CCCCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCC
Confidence 9999999999999999998888888899999999999999999999988888899999988876553 89999999999
Q ss_pred EEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeeeccccCccccCcccccccCCCCCCCcCC
Q 008535 287 THLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESSALD 366 (562)
Q Consensus 287 t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 366 (562)
+++.++|.+++.|+..... .+++|.++++|++++++..+.+...+..+++.||+||++..++......
T Consensus 199 t~~~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------- 266 (436)
T TIGR01923 199 THISLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM-------- 266 (436)
T ss_pred eEEEeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc--------
Confidence 9999999999999886532 2689999999999999999988878999999999999987655432110
Q ss_pred ccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCC
Q 008535 367 HEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDG 446 (562)
Q Consensus 367 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g 446 (562)
.......|.+.++. .+++...+.+ +.|||+++|+.++.||++++..+...+.+|||+|||++++++||
T Consensus 267 ---~~~~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg 334 (436)
T TIGR01923 267 ---LHARPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEG 334 (436)
T ss_pred ---cccccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCC
Confidence 00111256665554 5555322111 55999999999999999988888877788999999999999999
Q ss_pred cEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCC
Q 008535 447 YVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCM 526 (562)
Q Consensus 447 ~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~ 526 (562)
.+++.||.+|+||++|.++++.+||+.|.+++.|.+++|++.++...++.++++++..++ .+.+++.+++++.++.++
T Consensus 335 ~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~~l~~~l~~~l~~~~ 412 (436)
T TIGR01923 335 FLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD--ISQAKLIAYLTEKLAKYK 412 (436)
T ss_pred CEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC--CCHHHHHHHHHHhhhCCC
Confidence 999999999999999999999999999999999999999998887777888888887653 677899999999999999
Q ss_pred CCcEEEeec-ccCCCCCcchHHHH
Q 008535 527 VPRAIFFED-IPVNSTGKVQKFVL 549 (562)
Q Consensus 527 ~p~~i~~~~-lP~t~~GKv~r~~l 549 (562)
+|..+.+.+ ||+|++||++|++|
T Consensus 413 ~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 413 VPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCeEEEEecCCCCCCCCceecccC
Confidence 999888655 99999999999875
No 113
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-60 Score=497.42 Aligned_cols=498 Identities=21% Similarity=0.215 Sum_probs=383.1
Q ss_pred ChHHHHHHHHHHcCCceEEEECC---eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceE
Q 008535 21 TPIDFLERAAHVYGDATSIIYGT---VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVL 97 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (562)
++.++|+..++.+|+..++...+ +.+||+||+.++.++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 101 (579)
T PRK09192 22 TLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVP 101 (579)
T ss_pred hHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCee
Confidence 89999999999988776654332 579999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCC-------HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCC
Q 008535 98 SALNTRLD-------SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNF 170 (562)
Q Consensus 98 v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
+|+++..+ .+++.++++.+++++++++....+.+....... .....
T Consensus 102 v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~---------~~~~~------------------ 154 (579)
T PRK09192 102 VPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN---------PLLHV------------------ 154 (579)
T ss_pred EeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc---------cccce------------------
Confidence 99976443 689999999999999999987665554432111 00000
Q ss_pred CCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh-hcCCCCCCeeeeeccccc
Q 008535 171 PSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS-RCDVRDMPVFLWTLDMFR 249 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~l~~~pl~~ 249 (562)
.++.++........ ......++++++++|||||||.||||.++|++++........ .+++.++|+++.++|++|
T Consensus 155 ----~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 229 (579)
T PRK09192 155 ----LSHAWFKALPEADV-ALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYH 229 (579)
T ss_pred ----eehhhhcccCCCcc-ccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCC
Confidence 01111111111110 111235679999999999999999999999999988877776 788999999999999999
Q ss_pred chhhHH-HHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccc---cccccccceEEEEEeCC
Q 008535 250 CNGWCC-TWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASA---SDQNQLQRKVIIVIAGV 321 (562)
Q Consensus 250 ~~gl~~-~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~l~~i~~~g~ 321 (562)
.+++.. ++.++..|+++++.+. .++..+++.+.++++++++..|..+..+..... ....+++++|.+++||+
T Consensus 230 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~ 309 (579)
T PRK09192 230 DMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGAD 309 (579)
T ss_pred cchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCc
Confidence 999875 4445667777766542 368899999999999988877666665543321 12246789999999999
Q ss_pred CChHHHHHHHHhc----C---CeeeccccCccccCcccccccCCCCC------------CCcCC----ccccccccccCc
Q 008535 322 LPTIEVLEQVANF----G---FNIRHAYGMTEVLGPAIVRQWKPEGE------------SSALD----HEHEMTKHREGL 378 (562)
Q Consensus 322 ~l~~~~~~~~~~~----~---~~l~~~YG~tE~~~~~~~~~~~~~~~------------~~~~~----~~~~~~~~~~g~ 378 (562)
+++++..+.+.+. + ..+++.||+||+++.++......... ..... .........+|.
T Consensus 310 ~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ 389 (579)
T PRK09192 310 MIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGK 389 (579)
T ss_pred cCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCC
Confidence 9999999888743 2 24899999999976655432111000 00000 000011235777
Q ss_pred cccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh-ccceeeeCceeEEcCCCcEEEeccccce
Q 008535 379 NNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF-RNGWYHTGDLAVRNPDGYVQMKDRRKDI 457 (562)
Q Consensus 379 ~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~ 457 (562)
+.++. .++|++. ++..++.+ +.|||+++|+.++.||+++ ..+...+ .+|||+|||+|++ ++|.+++.||.+|+
T Consensus 390 ~~p~~-~v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~ 463 (579)
T PRK09192 390 ALPGH-EIEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDL 463 (579)
T ss_pred cCCCc-EEEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccE
Confidence 77777 7888875 56666655 7799999999999999999 4444444 5899999999999 89999999999999
Q ss_pred eecCCeEechHHHHHHHhcCCCce--eEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCC-CCCCCcEEEee
Q 008535 458 IISGAEIISSLEVEAVLLSNPKVL--EAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELP-SCMVPRAIFFE 534 (562)
Q Consensus 458 i~~~G~~v~~~~iE~~l~~~~~v~--~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~~ 534 (562)
||++|.+|+|.+||++|.++|+|. +++|++++++. ++.++++++..+....+.+++.+++++.+. .+++|..+.+.
T Consensus 464 i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~~ 542 (579)
T PRK09192 464 IIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVELV 542 (579)
T ss_pred EEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 999999999999999999999998 89999988875 558888888766555567889999988874 67788776654
Q ss_pred ---cccCCCCCcchHHHHhhhhhhhc
Q 008535 535 ---DIPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 535 ---~lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
+||+|++||++|++|++.+....
T Consensus 543 ~~~~lP~t~~GKv~R~~l~~~~~~~~ 568 (579)
T PRK09192 543 PPHSLPRTSSGKLSRAKAKKRYLSGA 568 (579)
T ss_pred CCCCcCCCCCcchhHHHHHHHHHcCC
Confidence 59999999999999999987754
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-57 Score=477.97 Aligned_cols=494 Identities=20% Similarity=0.186 Sum_probs=375.3
Q ss_pred ChHHHHHHHHHHcCCceEEEECC--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 21 TPIDFLERAAHVYGDATSIIYGT--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
++.++|...++..|+.+++...+ +.+||.||++++.++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 68888999999999999996644 6899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHH-------HHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCC
Q 008535 99 ALNTRLDSATL-------ASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFP 171 (562)
Q Consensus 99 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
++++..+.+++ ..+++.++++.+++++........... . ...
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~--------~~~---------------------- 131 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE-K--------GIR---------------------- 131 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc-c--------CCc----------------------
Confidence 99988776544 456777899999998765433322110 0 000
Q ss_pred CCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCC-Ceeeeecccccc
Q 008535 172 SGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDM-PVFLWTLDMFRC 250 (562)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~l~~~pl~~~ 250 (562)
...+.++....+. ......++++++++|||||||.||+|.++|+++..........+++... |++++.+|++|.
T Consensus 132 --~~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 206 (545)
T PRK07768 132 --VLTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHD 206 (545)
T ss_pred --eeehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccc
Confidence 1222232222111 1123456899999999999999999999999998888877777888776 899999999999
Q ss_pred hhhHH-HHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhcc----ccccccccceEEEEEeCC
Q 008535 251 NGWCC-TWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANAS----ASDQNQLQRKVIIVIAGV 321 (562)
Q Consensus 251 ~gl~~-~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~----~~~~~~l~~l~~i~~~g~ 321 (562)
.++.. ...++..|++.++.++ .++..+.+.+++++++++..+|..+..+.... .....+++++|.++.+|+
T Consensus 207 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~ 286 (545)
T PRK07768 207 MGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAE 286 (545)
T ss_pred hHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccC
Confidence 99875 4456778888777653 37888999999999999988888877665432 122356789999999999
Q ss_pred CChHHHHHHHHh----cCC---eeeccccCccccCcccccccCCCCCC------------CcC--CccccccccccCccc
Q 008535 322 LPTIEVLEQVAN----FGF---NIRHAYGMTEVLGPAIVRQWKPEGES------------SAL--DHEHEMTKHREGLNN 380 (562)
Q Consensus 322 ~l~~~~~~~~~~----~~~---~l~~~YG~tE~~~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~g~~~ 380 (562)
+++++..+.+.+ ++. .+++.||+||++..++.......... ..+ ...........|.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 366 (545)
T PRK07768 287 PIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPL 366 (545)
T ss_pred CCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCC
Confidence 999999888864 454 48999999999866544322110000 000 000112234677887
Q ss_pred cccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCCCcEEEeccccceeec
Q 008535 381 LLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPDGYVQMKDRRKDIIIS 460 (562)
Q Consensus 381 ~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~ 460 (562)
++. .+++++. ++..++.+ +.|||+++|+.++.||++.+......+.+|||+|||+++++++|.+++.||.+|+|+.
T Consensus 367 ~g~-~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~ 442 (545)
T PRK07768 367 PGL-EVRVVDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIM 442 (545)
T ss_pred CCC-EEEEECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEE
Confidence 776 7888874 56766655 7799999999999999987665555456889999999999999999999999999999
Q ss_pred CCeEechHHHHHHHhcCCCceeEEEEeee--CCCCCceeEEEEEeCCCCC-CCHHHHHHHHhccCCCC--CCCcEEEee-
Q 008535 461 GAEIISSLEVEAVLLSNPKVLEAAVVGKV--DDQLKEVPVAFVKLKEGRE-ASPEELVTFCGDELPSC--MVPRAIFFE- 534 (562)
Q Consensus 461 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~--~~~~~~~~v~~v~~~~~~~-~~~~~l~~~~~~~l~~~--~~p~~i~~~- 534 (562)
+|.+++|.+||+.|.++|+|.+++|++.. +...++..+++++...... ....++.+++++.+..+ ..|..+.++
T Consensus 443 ~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~ 522 (545)
T PRK07768 443 AGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLG 522 (545)
T ss_pred CCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeC
Confidence 99999999999999999999998777654 3334455555555433211 12245666776665443 578777765
Q ss_pred --cccCCCCCcchHHHHhhhhh
Q 008535 535 --DIPVNSTGKVQKFVLRGKVN 554 (562)
Q Consensus 535 --~lP~t~~GKv~r~~l~~~~~ 554 (562)
.||+|++||++|+.|+++|.
T Consensus 523 ~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 523 PGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCcCCCCCchhHHHHHHHHhcC
Confidence 49999999999999999885
No 115
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-57 Score=456.87 Aligned_cols=405 Identities=18% Similarity=0.166 Sum_probs=343.9
Q ss_pred EEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCC
Q 008535 38 SIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLE 117 (562)
Q Consensus 38 a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 117 (562)
+++++++++||.||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 36677889999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCC
Q 008535 118 AKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHEC 197 (562)
Q Consensus 118 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (562)
++.+++++.... . .. .....++
T Consensus 80 ~~~~i~~~~~~~-----------------~------~~-----------------------------------~~~~~~~ 101 (414)
T PRK08308 80 CHGLLYGESDFT-----------------K------LE-----------------------------------AVNYLAE 101 (414)
T ss_pred CCEEEecCcccc-----------------c------cc-----------------------------------CCCCCCC
Confidence 999998753100 0 00 0012456
Q ss_pred CceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhH-HHHHhHhhceEEEEeccCCHHH
Q 008535 198 DPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIRTVSAKI 276 (562)
Q Consensus 198 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~~~~~ 276 (562)
++++++|||||||.||+|.+||+++..+.......+....+++++...|++|.+|+. ..+.++..|+++++.+.+++..
T Consensus 102 ~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 181 (414)
T PRK08308 102 EPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKF 181 (414)
T ss_pred CceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHH
Confidence 899999999999999999999999998888888888888999999999999999975 4677788899999888899999
Q ss_pred HHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeeeccccCccccCccccccc
Q 008535 277 IFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQW 356 (562)
Q Consensus 277 ~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~ 356 (562)
+++.++++++++++++|.+++.|.+.... ..+++.++.+|++++++..+.+++.+.++++.||+||++.+.....
T Consensus 182 ~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~- 256 (414)
T PRK08308 182 ALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD- 256 (414)
T ss_pred HHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC-
Confidence 99999999999999999999999876432 2367889999999999999999877789999999999975433110
Q ss_pred CCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeee
Q 008535 357 KPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHT 436 (562)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~T 436 (562)
......+|.|.++. .+++.+. .++.||+++++. ++||+|
T Consensus 257 -------------~~~~~~~G~p~~~~-~~~~~~~---------~~~~gel~v~~~------------------~~~~~T 295 (414)
T PRK08308 257 -------------MKSHLDLGNPLPHV-SVSAGSD---------ENAPEEIVVKMG------------------DKEIFT 295 (414)
T ss_pred -------------CCCCCccCccCCCe-EEEEecC---------CCCCceEEEEcC------------------CceEEC
Confidence 01123456665554 4444321 124599999752 579999
Q ss_pred CceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHH
Q 008535 437 GDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVT 516 (562)
Q Consensus 437 GD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~ 516 (562)
||+|++|+||.+++.||.||+||++|++|+|.+||+++.++++|.+++|++.+++..++.++++++... ..+.+++++
T Consensus 296 GDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ 373 (414)
T PRK08308 296 KDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLRE 373 (414)
T ss_pred CceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999888889988888654 467889999
Q ss_pred HHhccCCCCCCCcEEEeec-ccCCCCCcchHHHH
Q 008535 517 FCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVL 549 (562)
Q Consensus 517 ~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l 549 (562)
+++++++.+++|..+++.+ ||+|++||++|+.|
T Consensus 374 ~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 374 WCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred HHHHhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 9999999999999988665 99999999999954
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.9e-56 Score=420.00 Aligned_cols=507 Identities=21% Similarity=0.211 Sum_probs=399.5
Q ss_pred CCCCChHHHHHHHHHHcCCceEEEECC--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 17 NVPLTPIDFLERAAHVYGDATSIIYGT--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 17 ~~~~ti~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
....|+.+++.++++++|+++|+++.+ +++||+|+.+.++++|+.|...|++.||+|+++|+|.+|++.+.++++++|
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 356799999999999999999999977 699999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGS 174 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
++...||++...+.+.+.++.+++++++++.+..+.+.+..+.+... ......++... .+.+.
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~-----~i~~~~~~~~~------------~~~g~ 216 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKN-----GIHVFSLGPTS------------VPDGI 216 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhc-----cceEEecCCCC------------CCchH
Confidence 99999999999999999999999999999999888777764333221 12222222111 12233
Q ss_pred CchhhhhhcccCcc---ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccch
Q 008535 175 LDYNDLLEMGKADF---EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCN 251 (562)
Q Consensus 175 ~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 251 (562)
.++...++..+.++ ....+.+..++++.+|||||||.||+.++||...+..+......+++++.|++..++|++|..
T Consensus 217 ~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsa 296 (649)
T KOG1179|consen 217 ESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSA 296 (649)
T ss_pred HHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHH
Confidence 33333333333222 222334567999999999999999999999999888888888999999999999999999998
Q ss_pred hhHH-HHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHH
Q 008535 252 GWCC-TWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQ 330 (562)
Q Consensus 252 gl~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~ 330 (562)
+... .-.++..|+++++-.+|+..++|+.-.+|++|++.-.-.+.|.|++.+.....+-..+|..+-.| +.++.++.
T Consensus 297 a~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~ 374 (649)
T KOG1179|consen 297 AGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQ 374 (649)
T ss_pred HHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHH
Confidence 8765 56677888899988899999999999999999999999999999999988878888888887665 77888988
Q ss_pred HH-hcCCe-eeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccC--------CcccccCC
Q 008535 331 VA-NFGFN-IRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQN--------TMKSVPHD 400 (562)
Q Consensus 331 ~~-~~~~~-l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~--------~~~~~~~~ 400 (562)
|. +||.. +.+.||+||......... .. ....... ........++ .+--.|++ .|-..++.
T Consensus 375 Fv~RFg~~~IgE~YgaTEgn~~~~N~d-~~-----vGA~G~~---~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~ 444 (649)
T KOG1179|consen 375 FVKRFGIIKIGEFYGATEGNSNLVNYD-GR-----VGACGFM---SRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCP 444 (649)
T ss_pred HHHHcCCCeEEEEeccccCcceeeeec-Cc-----cccccch---hhhhhhccce-EEEEecCCCCceeecCCceEEECC
Confidence 87 67765 999999999754333221 10 0000000 0001111112 11112333 34444556
Q ss_pred CCceeEEEEc----ch-hhhhhhcCCchhhHhhh-----c--cceeeeCceeEEcCCCcEEEeccccceeecCCeEechH
Q 008535 401 GKTLGEVMFR----AN-TVMLGYFKNPKATEEAF-----R--NGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSL 468 (562)
Q Consensus 401 ~~~~Gel~v~----~~-~~~~gy~~~~~~~~~~~-----~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 468 (562)
.||.|.++-+ .| .-|.||.+....++++. . |-||.|||+-.+|+.|.+||.+|..|.++.+|++|+..
T Consensus 445 ~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTt 524 (649)
T KOG1179|consen 445 PGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTT 524 (649)
T ss_pred CCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHH
Confidence 6677865432 22 33889999777776654 3 55999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEEeeeCCCCCc-eeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchH
Q 008535 469 EVEAVLLSNPKVLEAAVVGKVDDQLKE-VPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQK 546 (562)
Q Consensus 469 ~iE~~l~~~~~v~~~~v~~~~~~~~~~-~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r 546 (562)
|||++|..+..+.|+.|.++.-+.... .=.|.|+..+..+.+.+++-+++++.||+|.+|.++.+.+ +++|.+=|..|
T Consensus 525 EVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K 604 (649)
T KOG1179|consen 525 EVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQK 604 (649)
T ss_pred HHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHH
Confidence 999999999999999999987765333 2335555788888899999999999999999999999766 99999999999
Q ss_pred HHHhhh
Q 008535 547 FVLRGK 552 (562)
Q Consensus 547 ~~l~~~ 552 (562)
..|.+.
T Consensus 605 ~~L~~e 610 (649)
T KOG1179|consen 605 TELQKE 610 (649)
T ss_pred HHHHHc
Confidence 998654
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3e-55 Score=445.95 Aligned_cols=398 Identities=27% Similarity=0.370 Sum_probs=312.5
Q ss_pred HHHHHHHcCCceEEEE-CCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCC
Q 008535 26 LERAAHVYGDATSIIY-GTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRL 104 (562)
Q Consensus 26 l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 104 (562)
|+++|+++|+++|+++ .++.+||+||++++.++|..|.++|+++||+|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6889999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhCCceEEEE----eccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhh
Q 008535 105 DSATLASILRQLEAKIIFV----DYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDL 180 (562)
Q Consensus 105 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
+.+++.++++.++++++|+ +......+......... ...++.++..... ....+
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~----------------~~~~~ 138 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDP------SSSIIILDRDDLP----------------KKEAL 138 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTT------TEEEEEESHSSCT----------------TCHHH
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccccc------ccccccccccccc----------------ccccc
Confidence 9999999999999999998 22221222222211110 1223333222110 00111
Q ss_pred hhcccCccccCCC-CCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHH--hhcCCCCCCeeeeecccccchhh-HHH
Q 008535 181 LEMGKADFEMMQP-NHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQI--SRCDVRDMPVFLWTLDMFRCNGW-CCT 256 (562)
Q Consensus 181 ~~~~~~~~~~~~~-~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~l~~~pl~~~~gl-~~~ 256 (562)
.......... .+ ..++++++++|||||||.||+|.++|+++........ ..++++ |++++.+|++|.+|+ ...
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~ 215 (417)
T PF00501_consen 139 KSASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISAL 215 (417)
T ss_dssp HHHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHH
T ss_pred cccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccc
Confidence 1100000000 00 0467999999999999999999999999988877754 223333 699999999999999 778
Q ss_pred HHhHhhceEEEEeccCC---HHHHHHHHHhcCeEEEEcchHHHHHHHhccccc----cccccceEEEEEeCCCChHHHHH
Q 008535 257 WAMAAVGGINVCIRTVS---AKIIFDSILIHKVTHLCGQPRILNMIANASASD----QNQLQRKVIIVIAGVLPTIEVLE 329 (562)
Q Consensus 257 ~~~~~~g~~~v~~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~l~~l~~i~~~g~~l~~~~~~ 329 (562)
+.++..|+++++.+... ++.+++.++++++++++++|.+++.|++..+.. ...++++|.++++|++++++..+
T Consensus 216 ~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 295 (417)
T PF00501_consen 216 LAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLR 295 (417)
T ss_dssp HHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHH
T ss_pred cccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhcc
Confidence 88899999999987654 477899999999999999999999998843222 34788899999999999999999
Q ss_pred HHHh-cCC-eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEE
Q 008535 330 QVAN-FGF-NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEV 407 (562)
Q Consensus 330 ~~~~-~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel 407 (562)
.+++ ++. ++++.||+||++.+++.... .........+|.|.++. .++|++.+++++++.+ +.|||
T Consensus 296 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~----------~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei 362 (417)
T PF00501_consen 296 RLRKAFGNAPIINLYGSTETGSIATIRPP----------EDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEI 362 (417)
T ss_dssp HHHHHHTTSEEEEEEEEGGGSSEEEEEET----------TTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEE
T ss_pred ccccccccccceecccccccceeeecccc----------ccccccccccccccccc-cccccccccccccccc--ccccc
Confidence 9985 465 89999999999988865420 01111234567777777 8899988778888776 67999
Q ss_pred EEcchhhhhhhcCCchhhHhhhcc-ceeeeCceeEEcCCCcEEEeccccceeecC
Q 008535 408 MFRANTVMLGYFKNPKATEEAFRN-GWYHTGDLAVRNPDGYVQMKDRRKDIIISG 461 (562)
Q Consensus 408 ~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~ 461 (562)
+|+|+.++.||+++++.+.+.|.+ |||+|||+|++|+||.++++||.||+||++
T Consensus 363 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 363 VIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred cccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999999976 899999999999999999999999999964
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=9e-52 Score=419.39 Aligned_cols=393 Identities=25% Similarity=0.258 Sum_probs=324.3
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 47 SWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 47 Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
||+||.+.+.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchhhhhhcccCccccCCCCCCCCceEEEec
Q 008535 126 QFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYT 205 (562)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T 205 (562)
.....+.... .....+..... ..................+++++++||
T Consensus 81 ~~~~~~~~~~------------~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~i~~T 128 (408)
T TIGR01733 81 ALASRLAGLV------------LPIILVDPLEL--------------------AALDDAPAPPPPDAPSGPDDLAYVIYT 128 (408)
T ss_pred chhhhccccC------------CceEEechhhh--------------------hhcccccccccccCCCCCCCcEEEEEc
Confidence 7655432211 01111110000 000000000000011346799999999
Q ss_pred cCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccC---CHHHHHHHHH
Q 008535 206 SGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTV---SAKIIFDSIL 282 (562)
Q Consensus 206 SGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~---~~~~~~~~i~ 282 (562)
|||||.||+|.+||+++..........+.+..++++++..|++|.+++...+.++..|+++++.+.. .+..+.+.++
T Consensus 129 SGTtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 208 (408)
T TIGR01733 129 SGSTGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIA 208 (408)
T ss_pred CCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHH
Confidence 9999999999999999999988888888999999999999999999999999999999999987654 3688999999
Q ss_pred hcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcC-CeeeccccCccccCcccccccCCCC
Q 008535 283 IHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFG-FNIRHAYGMTEVLGPAIVRQWKPEG 360 (562)
Q Consensus 283 ~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~-~~l~~~YG~tE~~~~~~~~~~~~~~ 360 (562)
+++++.+.++|.+++.|++... ..++++|.++.+|+++++++.+.++ .++ ..+++.||+||+++++.........
T Consensus 209 ~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~ 285 (408)
T TIGR01733 209 EHPVTVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADD 285 (408)
T ss_pred HcCceEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccc
Confidence 9999999999999999988764 5688999999999999999999998 455 8999999999998776533222111
Q ss_pred CCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhcc-------c-
Q 008535 361 ESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRN-------G- 432 (562)
Q Consensus 361 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g- 432 (562)
.. .. ....+|.+.++. .++|++.+ +..++.+ +.|||+++|+.++.||+++++.+...|.. |
T Consensus 286 ~~------~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~ 354 (408)
T TIGR01733 286 AP------RE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGA 354 (408)
T ss_pred cC------Cc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCc
Confidence 10 00 245678888887 88888875 6766655 77999999999999999999988888732 2
Q ss_pred -eeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEE
Q 008535 433 -WYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAV 485 (562)
Q Consensus 433 -~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 485 (562)
||+|||+|++|++|++++.||.+|+|+.+|.+++|.+||+.+..++.|.+++|
T Consensus 355 ~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 355 RLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred eEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 99999999999999999999999999999999999999999999999998864
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.5e-47 Score=378.75 Aligned_cols=320 Identities=24% Similarity=0.301 Sum_probs=270.2
Q ss_pred CCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEe---c
Q 008535 194 NHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCI---R 270 (562)
Q Consensus 194 ~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~---~ 270 (562)
..++|+++++|||||||.||+|.++|+++..........+ ...++++..+|++|.+++...+..+..|++.++. .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3467999999999999999999999999888776655443 3557889999999999998888888889988873 3
Q ss_pred cCCHHHHHHHHHhcC--eEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCCeeeccccCcccc
Q 008535 271 TVSAKIIFDSILIHK--VTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGFNIRHAYGMTEVL 348 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~~l~~~YG~tE~~ 348 (562)
.+++..+++.+++++ .++...+|..+..++..... ...+++++.+++||++++++..+.+.+.+.++++.||+||++
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~ 188 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETS 188 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccC
Confidence 578999999999998 56667788888777665432 245789999999999999999999888899999999999986
Q ss_pred CcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhh
Q 008535 349 GPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEA 428 (562)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 428 (562)
+.+.. .|.+.++. .+++ .+ |||+++|+.++.||++++..+. .
T Consensus 189 ~~~~~----------------------~G~~~~g~-~v~i--~~------------Gei~v~g~~~~~gY~~~~~~~~-~ 230 (358)
T PRK07824 189 GGCVY----------------------DGVPLDGV-RVRV--ED------------GRIALGGPTLAKGYRNPVDPDP-F 230 (358)
T ss_pred CCcCc----------------------CceeCCCC-EEEe--cC------------CEEEEecCccccccCCCccccc-c
Confidence 54321 23333333 3333 21 8999999999999999876432 1
Q ss_pred hccceeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC
Q 008535 429 FRNGWYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE 508 (562)
Q Consensus 429 ~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~ 508 (562)
..+|||+|||+|++ ++|.+++.||.||+||.+|.+|+|.+||..|.++|+|.+++|++.+++..++.++++++...+..
T Consensus 231 ~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~ 309 (358)
T PRK07824 231 AEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA 309 (358)
T ss_pred cCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC
Confidence 24789999999999 79999999999999999999999999999999999999999999999888999999998877666
Q ss_pred CCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhh
Q 008535 509 ASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNA 555 (562)
Q Consensus 509 ~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~ 555 (562)
...+++++++++.++.+++|..+.+++ ||+|++||++|++|++.|.+
T Consensus 310 ~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 PTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred cCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 788999999999999999999988665 99999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.4e-45 Score=405.63 Aligned_cols=475 Identities=13% Similarity=0.104 Sum_probs=346.6
Q ss_pred CChHHHHHHHHHHcCCceEEEEC---C--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc
Q 008535 20 LTPIDFLERAAHVYGDATSIIYG---T--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG 94 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 94 (562)
.|+.++|++.++++|+++++... + ..+||+|+.+++.++|..|.+.|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 58999999999999999999632 2 579999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCC
Q 008535 95 AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGS 174 (562)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
++.+|+.+ +.+++.+++++++++++|++.+..+.+..... . ....++.++...... ............
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~-----~Lr~IIv~d~~~~~~--~~~~~~~~~i~~ 574 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---R-----KLETVVYTHSFYDED--DHAVARDLNITL 574 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---c-----CCcEEEEECCCcccc--cccccccCCcce
Confidence 99999975 46789999999999999999776665543221 1 155666664311000 000000001124
Q ss_pred CchhhhhhcccCccc-cCCCCCCCCceEEEe---ccCCCCCCCceEeechhHHHHHHHHHhhc---CCCCCCeeeeeccc
Q 008535 175 LDYNDLLEMGKADFE-MMQPNHECDPISVNY---TSGSTGDPKGVVYSHRGAYLNSLAQISRC---DVRDMPVFLWTLDM 247 (562)
Q Consensus 175 ~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~---TSGtTG~PK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl 247 (562)
.+|.++.+.+..... ...+..++|++.|+| ||||||.||||++||+|+++++....... ...++|++++.+|+
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPL 654 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPF 654 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechH
Confidence 567888776532111 112236788998986 99999999999999999999888765432 35678999999999
Q ss_pred ccchhhHHHHHhHhhceEEEEeccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccc-------------------
Q 008535 248 FRCNGWCCTWAMAAVGGINVCIRTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQN------------------- 308 (562)
Q Consensus 248 ~~~~gl~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~------------------- 308 (562)
+|+++....+.++..|+++.. +++..+++.|++++||+++++|.++..+.........
T Consensus 655 aHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~ 731 (1452)
T PTZ00297 655 AMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSR 731 (1452)
T ss_pred HHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 999997777777888888763 4789999999999999999999999988653211000
Q ss_pred -----c------------------ccceEEEEEeCC--CChHHHHHHHHhcCCeeeccccCccccCcccccccCCCCCCC
Q 008535 309 -----Q------------------LQRKVIIVIAGV--LPTIEVLEQVANFGFNIRHAYGMTEVLGPAIVRQWKPEGESS 363 (562)
Q Consensus 309 -----~------------------l~~l~~i~~~g~--~l~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~ 363 (562)
. -..+|.+++||. +++ .+...++++..+||+||+. +.... ...
T Consensus 732 ~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~-----~~l~~~i~i~~g~glTE~~---~~~~~---~~~- 799 (1452)
T PTZ00297 732 LINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTS-----FSLLEHISVCYVPCLREVF---FLPSE---GVF- 799 (1452)
T ss_pred HHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccC-----hHHhCCceEEEecceEEee---eecCC---CCc-
Confidence 0 035888988873 343 3333478888999999942 11110 000
Q ss_pred cCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEc
Q 008535 364 ALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRN 443 (562)
Q Consensus 364 ~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~ 443 (562)
...|.|.+++ ++++.+.++.... ...|||+++ |+++|+.|.+. .+||+
T Consensus 800 ----------~~~G~Plpgv-EvKI~~~~E~~~~----~~~GEIlvr-------~~kdpe~T~e~-~~gW~--------- 847 (1452)
T PTZ00297 800 ----------CVDGTPAPSL-QVDLEPFDEPSDG----AGIGQLVLA-------KKGEPRRTLPI-AAQWK--------- 847 (1452)
T ss_pred ----------ccCCeecCce-EEEEcccccccCC----CCCCeEEEE-------ECCChHHHHHh-hCcCc---------
Confidence 0127777777 7888764332111 134999995 35788888763 35664
Q ss_pred CCCcEEEeccccceee-cCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCC--------------
Q 008535 444 PDGYVQMKDRRKDIII-SGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGRE-------------- 508 (562)
Q Consensus 444 ~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~-------------- 508 (562)
+||.++|+||.+|+|| .+|++|.|+.||+.+..+|.|.+++|++...+. ++|+|++++..-
T Consensus 848 ~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~~~~ 923 (1452)
T PTZ00297 848 RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMGEGG 923 (1452)
T ss_pred cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCCccc
Confidence 6999999999999999 899999999999999999999999999865543 788888763110
Q ss_pred -----CCHHH--------HHHHH---h--ccCCCCCCCcEEEeec--c-----cCCCCCcchHHHHhhhhhhhc
Q 008535 509 -----ASPEE--------LVTFC---G--DELPSCMVPRAIFFED--I-----PVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 509 -----~~~~~--------l~~~~---~--~~l~~~~~p~~i~~~~--l-----P~t~~GKv~r~~l~~~~~~~~ 557 (562)
.+..+ +.+.+ . ..+..+.+++.+.+.+ + -+|++.|+.|..+.+.|.+.-
T Consensus 924 ~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~I 997 (1452)
T PTZ00297 924 GPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVI 997 (1452)
T ss_pred cccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHH
Confidence 01222 22222 1 1245677887777644 3 289999999999999998764
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-38 Score=336.54 Aligned_cols=408 Identities=21% Similarity=0.201 Sum_probs=333.9
Q ss_pred CCChHHHHHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 19 PLTPIDFLERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..++..++.+.+...|+++|+...+.++||+++..+++++|..|.+.|+++++.|+++++.+++.+++++|++++|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|+++.++.+++..+++..+++.+++.......... .+. +.++....
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~~~~~~-------------------- 351 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG-------------LPG-LALDDALS-------------------- 351 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEecccccccccc-------------CCc-cccccccc--------------------
Confidence 99999999999999999999999998332211000 000 00000000
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhHHHHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWCCTWA 258 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~~~~~ 258 (562)
.............+++.+|++|||||||.||||..+|+++.....+....+.+...|+++...++.+.......+.
T Consensus 352 ----~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~ 427 (642)
T COG1020 352 ----EIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFG 427 (642)
T ss_pred ----cCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHH
Confidence 0000000011234578999999999999999999999998887777777799999999999999988888889999
Q ss_pred hHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccc--cccccceEEEEEeCCCChHHHHHHHHh
Q 008535 259 MAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASASD--QNQLQRKVIIVIAGVLPTIEVLEQVAN 333 (562)
Q Consensus 259 ~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~l~~l~~i~~~g~~l~~~~~~~~~~ 333 (562)
++..|+.++..+. .++..+.+.+.+++++++..+|..+..++...... ......++.+++||+.++.+....+..
T Consensus 428 ~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~ 507 (642)
T COG1020 428 ALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQ 507 (642)
T ss_pred HHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHH
Confidence 9999999998863 68999999999999999999999999998763222 222335999999999999999988774
Q ss_pred c---CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEc
Q 008535 334 F---GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFR 410 (562)
Q Consensus 334 ~---~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~ 410 (562)
. ...+.+.||.||+...+........... ....|.|.++. .+.|.+ +....++.+ ..||+++.
T Consensus 508 ~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~----------~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~ 573 (642)
T COG1020 508 LAALARRLLNLYGPTEATLDAPSFPISAELES----------RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIA 573 (642)
T ss_pred hccccceEeeccCccHHhhheeeEEcccccCC----------CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEEC
Confidence 3 3689999999996554443322111110 34667777775 777777 477888887 56999999
Q ss_pred chhhhhhhcCCchhhHhhhccc-eeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCC
Q 008535 411 ANTVMLGYFKNPKATEEAFRNG-WYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNP 478 (562)
Q Consensus 411 ~~~~~~gy~~~~~~~~~~~~~g-~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 478 (562)
|.++..||+++++.+..+|... +|+|||++++.+||.+.++||.|+++|++|.++.+.+||..+.++|
T Consensus 574 g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 574 GLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999999999999764 9999999999999999999999999999999999999999998764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.8e-39 Score=315.26 Aligned_cols=285 Identities=21% Similarity=0.185 Sum_probs=224.0
Q ss_pred CCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCC--CCCeeeeecccccchhhH-HHHHhHhhceEEEEeccCC
Q 008535 197 CDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVR--DMPVFLWTLDMFRCNGWC-CTWAMAAVGGINVCIRTVS 273 (562)
Q Consensus 197 ~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~l~~~pl~~~~gl~-~~~~~~~~g~~~v~~~~~~ 273 (562)
+..++++|||||||.||||.+||+++...+......+++. +.+++++.+|++|.+|+. ..+.++..|++++..+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 4678999999999999999999999988887777777664 346799999999999975 4566777898888888888
Q ss_pred HHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHHhcCC-eeeccccCccccCccc
Q 008535 274 AKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVANFGF-NIRHAYGMTEVLGPAI 352 (562)
Q Consensus 274 ~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~ 352 (562)
+..+++.++.+ ++++++|.+++.|.+.. ..+++++. ++||++++++..+.+++.+. ++++.||+||++++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~ 247 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGL 247 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHhcccchhheecccccccccc
Confidence 88888887654 79999999999997653 34667775 67899999999999987664 6999999999987544
Q ss_pred ccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhhccc
Q 008535 353 VRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAFRNG 432 (562)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g 432 (562)
... + ...+.+.+ ++++... ++ .+ .|+ ..
T Consensus 248 ~~~--~---------------~~~~~~~p---~~~~~~~-~~----------~~---~g~------------------~~ 275 (386)
T TIGR02372 248 REA--P---------------DDPFRLLP---DLACFAD-TL----------SS---AGL------------------AR 275 (386)
T ss_pred ccC--C---------------CCCcccCC---CccccCC-Cc----------cC---CCc------------------cc
Confidence 311 0 01122222 2222211 11 00 011 12
Q ss_pred eeeeCceeEEcCCCcEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCC--
Q 008535 433 WYHTGDLAVRNPDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREAS-- 510 (562)
Q Consensus 433 ~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~-- 510 (562)
|++|||++++|++|++++.||.||+||++|++|+|.+||++|.++|+|.+++|.. .++++.++|++.++....
T Consensus 276 ~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~ 350 (386)
T TIGR02372 276 RLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAEL 350 (386)
T ss_pred eeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHH
Confidence 6899999999999999999999999999999999999999999999999998863 356788998887654332
Q ss_pred HHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcch
Q 008535 511 PEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQ 545 (562)
Q Consensus 511 ~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~ 545 (562)
.++++++++++++.|++|..+.+.+ ||+|++||++
T Consensus 351 ~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 351 EIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 4689999999999999999988765 9999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.1e-36 Score=308.27 Aligned_cols=320 Identities=17% Similarity=0.183 Sum_probs=234.2
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHH---HhhcCCCCCCeeeeecccccc-hhhHHHHHhHhhceEEEEec
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQ---ISRCDVRDMPVFLWTLDMFRC-NGWCCTWAMAAVGGINVCIR 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~-~gl~~~~~~~~~g~~~v~~~ 270 (562)
..++++.+++||||||.||++.++|.++..+.... ...+++.++|++++..+..+. .++...+.....|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 34578889999999999999999999976554332 334578899998887665433 23334455667788888777
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccccc--ccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccc
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQ--LQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEV 347 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~--l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~ 347 (562)
..++..+++.|++++|++++++|+++..|++........ ..++|.++++||++++++.+.++ .+++++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 778899999999999999999999999998765433322 35899999999999999999998 569999999999998
Q ss_pred cCcccccccCCCCCCCcCCccccccccccCcccc-ccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhH
Q 008535 348 LGPAIVRQWKPEGESSALDHEHEMTKHREGLNNL-LIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATE 426 (562)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 426 (562)
++.......... ..|.+.. ....++|+|.+++.+++.| +.|||++++. +.
T Consensus 233 ~~~~~~~~~~~~---------------~~g~~~~~~~~~~eivd~~~g~~v~~G--e~Gelvvt~~------------~~ 283 (422)
T TIGR02155 233 IGPGVAMECVET---------------QDGLHIWEDHFYPEIIDPHTGEVLPDG--EEGELVFTTL------------TK 283 (422)
T ss_pred cCCceeeccccc---------------CCCceEecCeeEEEEECCCCCCCCCCC--CeeEEEEecC------------Cc
Confidence 532222111000 0111111 1125678887788888766 7799999973 23
Q ss_pred hhhccceeeeCceeEEcCC-C-----cEEEeccccceeecCCeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEE
Q 008535 427 EAFRNGWYHTGDLAVRNPD-G-----YVQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAF 500 (562)
Q Consensus 427 ~~~~~g~~~TGD~~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~ 500 (562)
..|..+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+.+........+.+++.
T Consensus 284 ~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~ 363 (422)
T TIGR02155 284 EALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLK 363 (422)
T ss_pred cccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEE
Confidence 3455779999999999875 4 468999999999999999999999999999999984444444444445567777
Q ss_pred EEeCCCCCC-C--------HHHHHHHHhccCCCCCCCcEEEee---cccCCCCCcchHH
Q 008535 501 VKLKEGREA-S--------PEELVTFCGDELPSCMVPRAIFFE---DIPVNSTGKVQKF 547 (562)
Q Consensus 501 v~~~~~~~~-~--------~~~l~~~~~~~l~~~~~p~~i~~~---~lP~t~~GKv~r~ 547 (562)
|+..++... . .++|++.+++.+..+. .|.++ +||+|+ ||++|.
T Consensus 364 v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 364 VELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceEE
Confidence 776543211 1 3567788877776653 24443 599988 999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=1.8e-33 Score=284.75 Aligned_cols=510 Identities=16% Similarity=0.179 Sum_probs=352.4
Q ss_pred CChHHHHHHHHHHcCCceEEEECC------eeccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGT------VRFSWRQTHQICLKLASALAQL-KISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~-gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
.+|.++|+++++..|+.+|+..-+ .++||++|..+|++++..|... -+++||.|+++++++.|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 789999999999999999998743 5799999999999999999974 589999999999999999999999999
Q ss_pred ccceEEecCCCC------CHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccc
Q 008535 93 AGAVLSALNTRL------DSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSV 166 (562)
Q Consensus 93 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (562)
+|.+++|++|.. ..+.+..+++.+++.+|+++......+..-..... ......+.++..++-.
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~--~~~s~~p~i~~~~~~~--------- 918 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAH--VDQSAIPLILVLPKLP--------- 918 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHH--hhhhcchhhhcccccc---------
Confidence 999999998743 34678899999999999999887665543221110 0001123333332211
Q ss_pred cCCCCCCCCchhhhhhcccCcc--ccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeee
Q 008535 167 ANNFPSGSLDYNDLLEMGKADF--EMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWT 244 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~ 244 (562)
.++....+.-.... ..+....++.+|++-+.--++|.--++.++|.++++.+........+.+..-++.+
T Consensus 919 --------~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~ 990 (1363)
T KOG3628|consen 919 --------ETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGC 990 (1363)
T ss_pred --------hhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEE
Confidence 01111111111111 11122456799999999999999999999999999999999999998888888888
Q ss_pred cccccchhhH-HHHHhHhhceEEEEecc----CCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccce------
Q 008535 245 LDMFRCNGWC-CTWAMAAVGGINVCIRT----VSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRK------ 313 (562)
Q Consensus 245 ~pl~~~~gl~-~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l------ 313 (562)
.+.+...|+. +.+...+.|...+++++ .+|.-++..++++++.-++.+-..++.+.+........++..
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~ 1070 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS 1070 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc
Confidence 8887777766 46666777877777654 478899999999999999998888888877654443333321
Q ss_pred EEEEEeCCCChHHHHHHHHh----cCCe---eeccccCccccCcccccccCCCC-----CCCcCCccc----------cc
Q 008535 314 VIIVIAGVLPTIEVLEQVAN----FGFN---IRHAYGMTEVLGPAIVRQWKPEG-----ESSALDHEH----------EM 371 (562)
Q Consensus 314 ~~i~~~g~~l~~~~~~~~~~----~~~~---l~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~----------~~ 371 (562)
..++..-++......+-|.+ .|+. +.-.|++.=--.++.....+++- +...+.++. ..
T Consensus 1071 s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l 1150 (1363)
T KOG3628|consen 1071 SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSL 1150 (1363)
T ss_pred ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcc
Confidence 34444566666665555543 3432 44445544333333322111110 100100100 00
Q ss_pred cccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchh-hHhhh----------ccceeeeCcee
Q 008535 372 TKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKA-TEEAF----------RNGWYHTGDLA 440 (562)
Q Consensus 372 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~-~~~~~----------~~g~~~TGD~~ 440 (562)
.-...|...+.. ++.|+.+++..+ +.+++.||||+.|.+.+.+|++..+. ....| ..+|.||||+|
T Consensus 1151 ~L~dSG~~~~~~-~i~IvnPEtk~p--c~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LG 1227 (1363)
T KOG3628|consen 1151 LLYDSGKLPVYT-DIAIVNPETKGP--CRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLG 1227 (1363)
T ss_pred ccccCCcccccc-eeEEeCCccccc--cccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeee
Confidence 011123333333 556666655554 45558999999999999988875322 12223 23599999999
Q ss_pred EEcC------C----CcEEEeccccceeecCCeEechHHHHHHHhc-CCCceeEEEEeeeCCCCCceeEEEEEeCCCCCC
Q 008535 441 VRNP------D----GYVQMKDRRKDIIISGAEIISSLEVEAVLLS-NPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREA 509 (562)
Q Consensus 441 ~~~~------~----g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~ 509 (562)
++.. + ..+|++|-.++.+.++|.+++|.+||..+.+ |+.|.+|+|+.. +..+|+++++.. +.
T Consensus 1228 Fl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~~g--q~ 1300 (1363)
T KOG3628|consen 1228 FLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIECHG--QQ 1300 (1363)
T ss_pred eeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEecC--ch
Confidence 9942 2 3589999999999999999999999999875 799999999964 445777777665 23
Q ss_pred CHHHHHHHH-hccCCCCCCC-cEEEeec---ccCCCCCcchHHHHhhhhhhhcc
Q 008535 510 SPEELVTFC-GDELPSCMVP-RAIFFED---IPVNSTGKVQKFVLRGKVNATAV 558 (562)
Q Consensus 510 ~~~~l~~~~-~~~l~~~~~p-~~i~~~~---lP~t~~GKv~r~~l~~~~~~~~~ 558 (562)
...+|.-.+ ...|..|.+. +.+.|++ +|+++.|..+|..+++.+.++..
T Consensus 1301 ~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL 1354 (1363)
T KOG3628|consen 1301 ELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKL 1354 (1363)
T ss_pred hHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhccc
Confidence 333444333 3445666655 5556776 99999999999999998877653
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=3.3e-31 Score=277.48 Aligned_cols=498 Identities=18% Similarity=0.157 Sum_probs=324.1
Q ss_pred ChHHHHHHHHHHcCCceEEEEC--------CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhh
Q 008535 21 TPIDFLERAAHVYGDATSIIYG--------TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPM 92 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 92 (562)
++...+.+.+...|+..+..+- -.+.||++....++.+++.|...|..+|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 6677888888899998776552 15799999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCCCC----HHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccC
Q 008535 93 AGAVLSALNTRLD----SATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVAN 168 (562)
Q Consensus 93 ~G~~~v~l~~~~~----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
+|..+++++|.++ ++.+..+....... ..+...++.-....+.. ......+....
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~----~~~i~~~l~i~~~~~~~------~~~~~sv~~~~----------- 175 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSV----ELEIVRRLNIIDILLNS------LFPKLSVETIA----------- 175 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheec----cceehhhhhhHHHHhhc------cccccchhhcc-----------
Confidence 9999999999999 33222221111100 00111111100000000 00000000000
Q ss_pred CCCCCCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeeccc-
Q 008535 169 NFPSGSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDM- 247 (562)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl- 247 (562)
-.+..+.... ........-++..+++.||||+||.||+|..+|..+.....+....+.+...+.+-.....
T Consensus 176 ------~~f~~~~~~~--~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~ 247 (1032)
T KOG1178|consen 176 ------DSFQMVLHNE--DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVY 247 (1032)
T ss_pred ------chhhhhhccC--CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheee
Confidence 0011111000 0011111335568899999999999999999999999988888888888888776222333
Q ss_pred ccchhhHHHHHhHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccc-------------cccccc
Q 008535 248 FRCNGWCCTWAMAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANASAS-------------DQNQLQ 311 (562)
Q Consensus 248 ~~~~gl~~~~~~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-------------~~~~l~ 311 (562)
++..-.......+..|..+.++.. ..+.++.+.+.+++++..+.+|++.+.++..... .....+
T Consensus 248 ~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~ 327 (1032)
T KOG1178|consen 248 FDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRS 327 (1032)
T ss_pred cccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccch
Confidence 333333333344444554554432 3478999999999999999999998877665432 112344
Q ss_pred ceEEEEEeCCCChHHHHHHHHh-c-CCeeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceec
Q 008535 312 RKVIIVIAGVLPTIEVLEQVAN-F-GFNIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVK 389 (562)
Q Consensus 312 ~l~~i~~~g~~l~~~~~~~~~~-~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 389 (562)
.++....+|++........+.. + -.-...-|+.++..+......+.+......-........... ..+... .+...
T Consensus 328 ~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~-~~~~~~-~~~~~ 405 (1032)
T KOG1178|consen 328 CLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDS-IIGSLT-VLESL 405 (1032)
T ss_pred hheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhh-ccCCCc-ceeee
Confidence 7999999999998888875542 2 111223388888877776654433222111000000000000 001111 11111
Q ss_pred ccCCccccc--CCCCceeEEEEcchhhhhhhcCCchhhHhhh------ccceeeeCceeEEcCCCcEEEeccccceeecC
Q 008535 390 QQNTMKSVP--HDGKTLGEVMFRANTVMLGYFKNPKATEEAF------RNGWYHTGDLAVRNPDGYVQMKDRRKDIIISG 461 (562)
Q Consensus 390 ~~~~~~~~~--~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~------~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~ 461 (562)
.. .+.+.. .+.++.|+-+-.+..+..|| ..++.....+ .+.+|+|||.|+.-++|.+.+.||.|++||.+
T Consensus 406 ~~-~~~~~~~~v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~r 483 (1032)
T KOG1178|consen 406 YR-AGGEGEGGVGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDR 483 (1032)
T ss_pred ec-cCcccCCcccceeecccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEc
Confidence 11 111111 11112233333334444452 2222222222 34589999999999999999999999999999
Q ss_pred CeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCC-CHHHHHHHHhccCCCCCCCcEEEe-ecccCC
Q 008535 462 AEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREA-SPEELVTFCGDELPSCMVPRAIFF-EDIPVN 539 (562)
Q Consensus 462 G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~-~~~~l~~~~~~~l~~~~~p~~i~~-~~lP~t 539 (562)
|.++.+.+|+..+..+|.|.++++....+..-++.+++|++....... ...+++.++.+.++.|++|..++. .++|+|
T Consensus 484 G~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~ 563 (1032)
T KOG1178|consen 484 GVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPLAKVPLN 563 (1032)
T ss_pred cEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEhhhCCcC
Confidence 999999999999999999999999999999889999999998765433 357899999999999999987664 559999
Q ss_pred CCCcchHHHHhh
Q 008535 540 STGKVQKFVLRG 551 (562)
Q Consensus 540 ~~GKv~r~~l~~ 551 (562)
++||||+++|.+
T Consensus 564 ~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 564 PNGKVDKKALLE 575 (1032)
T ss_pred CCCCcChhhhhh
Confidence 999999999998
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=8.2e-29 Score=250.68 Aligned_cols=321 Identities=15% Similarity=0.066 Sum_probs=214.4
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHH-HHHhHhhceEEEEec
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCC-TWAMAAVGGINVCIR 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~ 270 (562)
..++++.+++||||||.||++.+||.++..+....... .++.++|+++...+..+..+... .+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 34578899999999999999999999987665544433 48889999999988876655443 344556676655333
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccc--cccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccc
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQN--QLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEV 347 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~--~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~ 347 (562)
.....++.+++++++.+.++|+.+..|+...+.... ...++|.+++|||+++++..+.++ .+|+++++.||+||+
T Consensus 164 --~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 164 --KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred --chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 234668999999999999999998888765443322 246899999999999999998888 569999999999998
Q ss_pred cCcccccccCCCCCCCcCCccccccccccCccc-cccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhH
Q 008535 348 LGPAIVRQWKPEGESSALDHEHEMTKHREGLNN-LLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATE 426 (562)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 426 (562)
+ ++..+.. . .|... .....++|+|++++.+++.| +.|||++++...... ..
T Consensus 242 ~-~~~~c~~---~---------------~g~h~~~d~~~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~~----r~--- 293 (445)
T TIGR03335 242 T-MCGECQA---V---------------AGLHVPEDLVHLDVYDPRHQRFLPDG--ECGRIVLTTLLKPGE----RC--- 293 (445)
T ss_pred h-heEEecC---C---------------CCccccCCceEEEEEcCCCCCCCcCC--CceEEEEEecCCCCc----cC---
Confidence 5 2222210 0 11111 11226889998777777766 779999987532100 00
Q ss_pred hhhccceeeeCceeEEc-CC----C----cEEEeccccceeecCCeEechHHHHHHHhcC---CCce-eEEEEeeeCCCC
Q 008535 427 EAFRNGWYHTGDLAVRN-PD----G----YVQMKDRRKDIIISGAEIISSLEVEAVLLSN---PKVL-EAAVVGKVDDQL 493 (562)
Q Consensus 427 ~~~~~g~~~TGD~~~~~-~~----g----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~v~-~~~v~~~~~~~~ 493 (562)
.+.---|+|||++++. .+ | ++...||.||+++++|.+++|.+||++|.++ +++. +..++...+...
T Consensus 294 -~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
T TIGR03335 294 -GSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEG 372 (445)
T ss_pred -CceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCC
Confidence 0000129999999973 23 2 1445699999999999999999999999994 5554 333332222222
Q ss_pred CceeEEEEEeCCCCCCCHHHHHHHHhcc----CCC-------CCCCcEEEeec---ccCC-CCCcchH
Q 008535 494 KEVPVAFVKLKEGREASPEELVTFCGDE----LPS-------CMVPRAIFFED---IPVN-STGKVQK 546 (562)
Q Consensus 494 ~~~~v~~v~~~~~~~~~~~~l~~~~~~~----l~~-------~~~p~~i~~~~---lP~t-~~GKv~r 546 (562)
...+.+.|+..+......+++.+.+.+. ++. ..+...+.+++ ||++ ..||..|
T Consensus 373 ~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 3355566666554333444544444443 222 11222333433 9998 4698776
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=9.2e-28 Score=229.47 Aligned_cols=319 Identities=17% Similarity=0.169 Sum_probs=233.4
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc---CCCCCCeeeeeccc-ccchhhHHHHHhHhhceEEEEec
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC---DVRDMPVFLWTLDM-FRCNGWCCTWAMAAVGGINVCIR 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl-~~~~gl~~~~~~~~~g~~~v~~~ 270 (562)
..++...|..||||||+|+-+.+|+..+..++....+.+ +...+|++.++... .+..|+...+++--.|++++...
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 345677799999999999999999999877776666554 67888988777663 33344455556666777777776
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhcccccc--ccccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccc
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQ--NQLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEV 347 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~ 347 (562)
.-+-+..+.++..++++++.++|+.+..|++..+..+ ..-.++|.+++|+|+++++.++.++ .+|+..++.||+||.
T Consensus 168 ~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~ 247 (438)
T COG1541 168 GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEG 247 (438)
T ss_pred CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccc
Confidence 6788899999999999999999999999999887664 4456899999999999999999999 679999999999999
Q ss_pred cCcc-cccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhH
Q 008535 348 LGPA-IVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATE 426 (562)
Q Consensus 348 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 426 (562)
.++. ..|.... +..++ ....-++++|+++++.++.| +.|||+++.-. +
T Consensus 248 ~g~g~~eC~~~~---glhi~--------------eD~~~~Ei~dP~t~e~l~dg--e~GelV~T~L~-------~----- 296 (438)
T COG1541 248 FGPGAGECTERN---GLHIW--------------EDHFIFEIVDPETGEQLPDG--ERGELVITTLT-------K----- 296 (438)
T ss_pred cCCccccccccc---CCCcc--------------hhhceeeeecCCcCccCCCC--CeeEEEEEecc-------c-----
Confidence 7774 2222111 11111 12237899999999988887 67999998743 1
Q ss_pred hhhccceeeeCceeEEcCC----Cc-----EEEeccccceeecCCeEechHHHHHHHhcCCCce-eEEEEeeeCCCCCce
Q 008535 427 EAFRNGWYHTGDLAVRNPD----GY-----VQMKDRRKDIIISGAEIISSLEVEAVLLSNPKVL-EAAVVGKVDDQLKEV 496 (562)
Q Consensus 427 ~~~~~g~~~TGD~~~~~~~----g~-----l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~ 496 (562)
..+.---|+|||+..+.++ |+ .++.||+||++++.|.+|+|..||++|.+++.+. +..++... ....+.
T Consensus 297 ~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~ 375 (438)
T COG1541 297 EGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDE 375 (438)
T ss_pred cCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCce
Confidence 1111113999999999874 22 5799999999999999999999999999999999 66666665 555667
Q ss_pred eEEEEEeCCCCCCCH--HHHHHHHhccCC-CCCCCcEEEeec---ccCCCCCcchH
Q 008535 497 PVAFVKLKEGREASP--EELVTFCGDELP-SCMVPRAIFFED---IPVNSTGKVQK 546 (562)
Q Consensus 497 ~v~~v~~~~~~~~~~--~~l~~~~~~~l~-~~~~p~~i~~~~---lP~t~~GKv~r 546 (562)
+.+.|++.+...... .++...+.+.+- ..-....|.++. +||+.. |..|
T Consensus 376 L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 376 LTVRVELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred EEEEEEecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceecccC-ceeE
Confidence 888888876422222 222233333322 222333344433 999964 6554
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=1.2e-25 Score=205.09 Aligned_cols=218 Identities=15% Similarity=0.090 Sum_probs=162.8
Q ss_pred HHHHHHHcCCceEEEEC------CeeccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 26 LERAAHVYGDATSIIYG------TVRFSWRQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 26 l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
|...++.+|+++|++.. +.++||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999742 2369999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCCCCCchh
Q 008535 99 ALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPSGSLDYN 178 (562)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
|++ .+++++++++.+..+.+.. ...++.+......... ......+..++.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 131 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-------------SGEVVALSLDPLGRRV----AGELPPGVIDFA 131 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-------------CCceEEEeccccccCC----CCCCCCcccchh
Confidence 995 6899999999876655321 1111222110000000 000012224555
Q ss_pred hhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhhcCCCCCCeeeeecccccchhhH-HHH
Q 008535 179 DLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRCDVRDMPVFLWTLDMFRCNGWC-CTW 257 (562)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~gl~-~~~ 257 (562)
+................++|++.++||||+ +|.+++.+. ...++.++|+++ ..|++|.+|+. .++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~ 197 (227)
T TIGR03089 132 PEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLL 197 (227)
T ss_pred hhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHH
Confidence 544432222222213456899999999986 666665554 566788999999 99999999986 577
Q ss_pred HhHhhceEEEEeccCCHHHHHHHHHhcCeE
Q 008535 258 AMAAVGGINVCIRTVSAKIIFDSILIHKVT 287 (562)
Q Consensus 258 ~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t 287 (562)
.++..|+++++.+++++..+++.|+++|+|
T Consensus 198 ~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 198 APLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 888999999999999999999999999986
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=7.3e-22 Score=190.19 Aligned_cols=121 Identities=20% Similarity=0.163 Sum_probs=109.9
Q ss_pred hhccceeeeCceeEE-cCCCcEEEeccccceeecCC---eEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEe
Q 008535 428 AFRNGWYHTGDLAVR-NPDGYVQMKDRRKDIIISGA---EIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKL 503 (562)
Q Consensus 428 ~~~~g~~~TGD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~ 503 (562)
.|.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||++|.+||+|.+|+|++++++.+|+.++++|++
T Consensus 205 ~~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~ 278 (365)
T PRK09188 205 LPSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEA 278 (365)
T ss_pred cccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEE
Confidence 346899999999998 7999999999998 78 799999 9999999999999999999999999999999997
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCcEEEeec-ccCCCCCcchHHHHhhhhhhhc
Q 008535 504 KEGREASPEELVTFCGDELPSCMVPRAIFFED-IPVNSTGKVQKFVLRGKVNATA 557 (562)
Q Consensus 504 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKv~r~~l~~~~~~~~ 557 (562)
.. ..+.++++++++++++. ++|+.+.+++ ||+|++||++|++|+.++.+..
T Consensus 279 ~~--~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~ 330 (365)
T PRK09188 279 EL--PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQI 330 (365)
T ss_pred CC--CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhccc
Confidence 63 45778999999999999 9999988665 9999999999999999875543
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.86 E-value=1.7e-20 Score=191.38 Aligned_cols=501 Identities=16% Similarity=0.085 Sum_probs=323.6
Q ss_pred ChHHHHHHHHHHcCCceEEEECC-----eeccHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhh
Q 008535 21 TPIDFLERAAHVYGDATSIIYGT-----VRFSWRQTHQICLKLAS-ALAQLKISRGDIVAAMAPNI--PALYKLHFAVPM 92 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~~a~-~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~ 92 (562)
.+...++.+-.+++...|.+.-+ ..+||..+..++.++|+ .|.+-|++++|+|.+++..+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 56777777778888888777633 57999999999999999 78889999999999999887 799999999999
Q ss_pred ccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhhcCCCCcCCCCCceeccCCCCCCCCCcccccCCCCC
Q 008535 93 AGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDILSPNHKCDKAPLLVTIPECDHYQPSTCSVANNFPS 172 (562)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
.|.+.+|+.+..+.+++..+++....+++++................. ...+...
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~------~k~v~~w------------------- 229 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSL------AKAVAWW------------------- 229 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccH------HHHHHhh-------------------
Confidence 999999999999999999999999999999987766554432200000 0000000
Q ss_pred CCCchhhhhhcccCccccCCCCCCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh--------------------
Q 008535 173 GSLDYNDLLEMGKADFEMMQPNHECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR-------------------- 232 (562)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~-------------------- 232 (562)
+..++..... .+....++..- ...+|-||++++|.--|++.+|. ++.+.+.+...
T Consensus 230 ~t~~~k~~~~---~~k~~~P~~~~-~~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v 304 (1363)
T KOG3628|consen 230 KTNDFKGNYT---KDKIKKPRMQL-PYGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHV 304 (1363)
T ss_pred hcccccceee---hhhccCCceee-eeEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhc
Confidence 0000000000 00000011112 27899999999999999999998 44443332221
Q ss_pred cCCCCCCeeeeecccccchhhHH-HHHhHhhceEEEEecc---CCHHHHHHHHHhcCeEEEEcchHHHHHHHhcc-----
Q 008535 233 CDVRDMPVFLWTLDMFRCNGWCC-TWAMAAVGGINVCIRT---VSAKIIFDSILIHKVTHLCGQPRILNMIANAS----- 303 (562)
Q Consensus 233 ~~~~~~~~~l~~~pl~~~~gl~~-~~~~~~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~----- 303 (562)
+.....+.++.........|+.. .+.+++.|.|.+.+++ ..|..+.+++-++|.+++..--..++......
T Consensus 305 ~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~ 384 (1363)
T KOG3628|consen 305 FPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPK 384 (1363)
T ss_pred cccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcc
Confidence 12233445555555555556554 6677888999888886 68889999999999999987655554443221
Q ss_pred ------ccccccccceEEEEEeCCCChHHHHHHHHhc-----CC---ee---------------eccccCccccCccccc
Q 008535 304 ------ASDQNQLQRKVIIVIAGVLPTIEVLEQVANF-----GF---NI---------------RHAYGMTEVLGPAIVR 354 (562)
Q Consensus 304 ------~~~~~~l~~l~~i~~~g~~l~~~~~~~~~~~-----~~---~l---------------~~~YG~tE~~~~~~~~ 354 (562)
+....++++++.+++....++.+..+...+. |. ++ +..=+.+|.+......
T Consensus 385 a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~ 464 (1363)
T KOG3628|consen 385 ATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRR 464 (1363)
T ss_pred cccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccC
Confidence 1123568899999999999998877655432 21 11 1112224443333222
Q ss_pred ccC----CCCCCCc-----------C---CccccccccccCccccccccceecccCCcccccCCCCceeEEEEcchhhhh
Q 008535 355 QWK----PEGESSA-----------L---DHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTLGEVMFRANTVML 416 (562)
Q Consensus 355 ~~~----~~~~~~~-----------~---~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 416 (562)
... ...+... + +.........++...++-..+.++++++...|..+ ++|||||.++.+.+
T Consensus 465 p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~ 542 (1363)
T KOG3628|consen 465 PEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGK 542 (1363)
T ss_pred cccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCccc
Confidence 220 0000000 0 00011222344444444446667777666666666 89999999999999
Q ss_pred hhcCCchhhHhhhc-------------cceeeeCceeEEcCCCcEEEeccccceee-cCCeEechHHHH----------H
Q 008535 417 GYFKNPKATEEAFR-------------NGWYHTGDLAVRNPDGYVQMKDRRKDIII-SGAEIISSLEVE----------A 472 (562)
Q Consensus 417 gy~~~~~~~~~~~~-------------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE----------~ 472 (562)
+||.-+..++..|. .-|.|||-+|++. .|.+|++|-.+|++. +.|...+..+|- .
T Consensus 543 ~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~ikt 621 (1363)
T KOG3628|consen 543 LFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKT 621 (1363)
T ss_pred ceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHH
Confidence 99998888887771 2389999999998 566777777777766 888887765543 4
Q ss_pred HHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC-CCCHHHHHHHHhccCCC-CCCCcEE-Eeec---ccCCCCCcchH
Q 008535 473 VLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR-EASPEELVTFCGDELPS-CMVPRAI-FFED---IPVNSTGKVQK 546 (562)
Q Consensus 473 ~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~-~~~~~~l~~~~~~~l~~-~~~p~~i-~~~~---lP~t~~GKv~r 546 (562)
+.+..+.|.++.++- +++++++++..+.. +.+.-+....+-+.+-. +++-... -+++ ||||+-|-+.-
T Consensus 622 V~R~v~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~ 695 (1363)
T KOG3628|consen 622 VMRGVIAVFDVSAFE------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHN 695 (1363)
T ss_pred HHhccceEEEEeeee------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCcccccccc
Confidence 445567888888884 44555555544442 11222333333332322 3332222 2444 99999999999
Q ss_pred HHHhhhhhhhcccc
Q 008535 547 FVLRGKVNATAVGW 560 (562)
Q Consensus 547 ~~l~~~~~~~~~~~ 560 (562)
.+++++|.+...+.
T Consensus 696 ~~~k~~F~~G~L~~ 709 (1363)
T KOG3628|consen 696 NECKQAFLEGSLPP 709 (1363)
T ss_pred HHHHHHHHcCCCCc
Confidence 99999999877554
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.76 E-value=1.4e-16 Score=157.45 Aligned_cols=255 Identities=14% Similarity=0.100 Sum_probs=159.3
Q ss_pred CceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceE-EEEec-cC
Q 008535 198 DPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGI-NVCIR-TV 272 (562)
Q Consensus 198 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~-~v~~~-~~ 272 (562)
....+..||||||+|-.+..+......+....... .++..++++.....- .+ .++..+..... +-..+ ..
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~--~ly~~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN--NLYQSVNNRWISLDFFDLLA 174 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch--hHHHHHHhccceeeecCCCc
Confidence 34567889999999999999998754433322222 134444444333210 00 11111111111 11111 25
Q ss_pred CHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEeCCCChHHHHHHHH-hcCCeeeccccCccccCcc
Q 008535 273 SAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIAGVLPTIEVLEQVA-NFGFNIRHAYGMTEVLGPA 351 (562)
Q Consensus 273 ~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g~~l~~~~~~~~~-~~~~~l~~~YG~tE~~~~~ 351 (562)
+.+.+++.|.+++|+++.++|+.+..|++..+..... ..++.++++||.++++..+.++ .+|+++++.||+|| |.++
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 6788999999999999999999999999876554433 4789999999999999999988 67999999999999 5554
Q ss_pred cccccCCCCCCCcCCccccccccccCccccccccce--ecccCCcccccCCCCceeEEEEcchhhhhhhcCCchhhHhhh
Q 008535 352 IVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVD--VKQQNTMKSVPHDGKTLGEVMFRANTVMLGYFKNPKATEEAF 429 (562)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 429 (562)
..|..+. ..+ ......++ ++|++ + .+..+|++-. +....
T Consensus 253 ~eC~~g~----lHl--------------~ed~~~vE~~ivD~~-~---------~~~~ViT~L~------n~~~P----- 293 (430)
T TIGR02304 253 STCRCGT----LHL--------------NEDLVHIEKQYLDEH-K---------RFVPIITDFT------RTTQP----- 293 (430)
T ss_pred EecCCCC----EEE--------------ccccEEEEeeEECCC-C---------ceEEEEecCC------Cccce-----
Confidence 4442211 000 00111233 45542 1 1444665522 11111
Q ss_pred ccceeeeCceeEEcCC----Cc----E-EEeccccceeec---CCe--EechHHHHHHHh-cCCCceeEEEEeeeCCCCC
Q 008535 430 RNGWYHTGDLAVRNPD----GY----V-QMKDRRKDIIIS---GAE--IISSLEVEAVLL-SNPKVLEAAVVGKVDDQLK 494 (562)
Q Consensus 430 ~~g~~~TGD~~~~~~~----g~----l-~~~GR~~d~i~~---~G~--~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~ 494 (562)
=--|+|||++.+.++ |. + .+.||.+|+++. +|. .++|..++.++. ..++|.+..++... .
T Consensus 294 -lIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~----~ 368 (430)
T TIGR02304 294 -IVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG----S 368 (430)
T ss_pred -EEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc----C
Confidence 112999999988654 22 3 488999999984 454 459999998855 57899999887632 2
Q ss_pred ceeEEEEEe
Q 008535 495 EVPVAFVKL 503 (562)
Q Consensus 495 ~~~v~~v~~ 503 (562)
+.+.+.++.
T Consensus 369 ~~l~v~~~~ 377 (430)
T TIGR02304 369 AQLELIADC 377 (430)
T ss_pred CeEEEEEEe
Confidence 334555554
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.28 E-value=8.3e-12 Score=91.70 Aligned_cols=69 Identities=46% Similarity=0.678 Sum_probs=60.3
Q ss_pred HHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccCCCCCCCcEEE---eec-ccCCCCCc
Q 008535 469 EVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDELPSCMVPRAIF---FED-IPVNSTGK 543 (562)
Q Consensus 469 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~---~~~-lP~t~~GK 543 (562)
|||++|.++|+|.+|+|++.+++.+|+.+++++++ +.++++++++++++.|++|+.+. +.+ ||+|+|||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 79999999999999999999999999999999997 44899999999999999995443 346 99999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.92 E-value=9.4e-08 Score=92.85 Aligned_cols=224 Identities=18% Similarity=0.203 Sum_probs=131.3
Q ss_pred CCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cC-CCCCC-eeeeecccccch-hhHH----HHHhHhhceE
Q 008535 196 ECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CD-VRDMP-VFLWTLDMFRCN-GWCC----TWAMAAVGGI 265 (562)
Q Consensus 196 ~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~-~~~~~-~~l~~~pl~~~~-gl~~----~~~~~~~g~~ 265 (562)
++++..++.||||||+|--+.+.+..+..+....... +. ..... .++...|-.... .+.. .......+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 4567789999999999866666665555444333322 22 22111 233333432211 1111 1111222222
Q ss_pred EEEec--cCCHHHHHHHHH----hcCeEEEEcchHHHHHHHhcccccccc--cc-ceEEEEEeC------CCCh-HHHHH
Q 008535 266 NVCIR--TVSAKIIFDSIL----IHKVTHLCGQPRILNMIANASASDQNQ--LQ-RKVIIVIAG------VLPT-IEVLE 329 (562)
Q Consensus 266 ~v~~~--~~~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~--l~-~l~~i~~~g------~~l~-~~~~~ 329 (562)
..+. .++.+.+...+. +.++..++++|.++-.++...+..... ++ ..+.+-.|| +.++ +++.+
T Consensus 168 -~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 168 -FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred -eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 3333 356776666654 457899999999887776655444333 33 345555666 3454 56666
Q ss_pred HHH-hcCC----eeeccccCccccCcccccccCCCCCCCcCCccccccccccCccccccccceecccCCcccccCCCCce
Q 008535 330 QVA-NFGF----NIRHAYGMTEVLGPAIVRQWKPEGESSALDHEHEMTKHREGLNNLLIQGVDVKQQNTMKSVPHDGKTL 404 (562)
Q Consensus 330 ~~~-~~~~----~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 404 (562)
.++ .+|+ ++++.||+||.....+.+.... ...+++ +.++|+++..+++.| +.
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~-------------------~~~p~w--V~iRDp~tl~~~~~G--e~ 303 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH-------------------FHVPPW--VIIRDPETLEPLPPG--ET 303 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCCc-------------------ccCCCe--EEEECCCCCcCCCCC--Ce
Confidence 676 4787 6999999999765444331110 122333 667788888877776 67
Q ss_pred eEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcCC--------CcEEEeccccc
Q 008535 405 GEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNPD--------GYVQMKDRRKD 456 (562)
Q Consensus 405 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~--------g~l~~~GR~~d 456 (562)
|-|.+-++... .| .+..-|.|+|.+..+ ..+.++||.+.
T Consensus 304 Gli~vidl~~~-s~------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 304 GLIQVIDLANT-SY------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred eEEEEEccccc-CC------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 99988766432 11 234779999988654 26899999874
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.54 E-value=1.1e-06 Score=90.59 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=67.6
Q ss_pred ceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcC--CC--cEEEeccccceeecCCeEechHHHHHHHhcC-
Q 008535 403 TLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNP--DG--YVQMKDRRKDIIISGAEIISSLEVEAVLLSN- 477 (562)
Q Consensus 403 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--~g--~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~- 477 (562)
+.-||+|+.. .|.|+ |+.||+.++.. ++ .+.|+||.+.++.+.|++++-.+|++++.+.
T Consensus 356 ~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~ 419 (528)
T PF03321_consen 356 EEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARAL 419 (528)
T ss_dssp -EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHH
T ss_pred CeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHH
Confidence 5588999864 34554 99999999942 23 7999999999999999999999999999875
Q ss_pred ----CCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccC
Q 008535 478 ----PKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDEL 522 (562)
Q Consensus 478 ----~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l 522 (562)
-.+.+..+...........-+.++++... ..+.+++.+.+.+.|
T Consensus 420 ~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 420 QETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp HCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred HhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 44667777765322333455666666544 223456666665555
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.98 E-value=0.001 Score=69.08 Aligned_cols=58 Identities=10% Similarity=0.230 Sum_probs=47.2
Q ss_pred ceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEcC----CCcEEEeccccceeecCCeEechHHHHHHHhc
Q 008535 403 TLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRNP----DGYVQMKDRRKDIIISGAEIISSLEVEAVLLS 476 (562)
Q Consensus 403 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 476 (562)
+.-+|+|+.. .|.|+ |+.||+.++.. -..+.|+||.+.++.+.|+++.-.+++.++.+
T Consensus 395 ~~Y~lVvTT~---~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 395 KEYELVITTY---AGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred CeEEEEEEcc---cceeE-------------eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 4578888753 23443 99999999953 35789999999999999999999999998876
No 136
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.74 E-value=9.1e-05 Score=57.29 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=50.0
Q ss_pred CeEechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCC---C----HHHHHHHHhccCCCCCCCcEEEee
Q 008535 462 AEIISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREA---S----PEELVTFCGDELPSCMVPRAIFFE 534 (562)
Q Consensus 462 G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~---~----~~~l~~~~~~~l~~~~~p~~i~~~ 534 (562)
|.++||.+||++|.++|++...+.+.+......+.+.+.|+..++... . .+++.+.+++.+.- .| .+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 789999999999999999994444444444456778888888876432 1 24555555555433 22 45544
Q ss_pred c---ccCCCCCcchH
Q 008535 535 D---IPVNSTGKVQK 546 (562)
Q Consensus 535 ~---lP~t~~GKv~r 546 (562)
+ ||++ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 4 9998 688766
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.70 E-value=0.0047 Score=63.80 Aligned_cols=59 Identities=12% Similarity=0.244 Sum_probs=47.1
Q ss_pred ceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEc----CCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 403 TLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRN----PDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 403 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
+.-||+|+.- .|.|+ ||.||+.++. ....+.|++|.+.+..+.|+|.+-.++..++.+.
T Consensus 402 ~~YelVvTt~---~GLYR-------------YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 402 HYYELVVTTF---TGLYR-------------YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred CeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 5578888752 23333 9999998884 3467999999999999999999999998888763
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.55 E-value=0.003 Score=65.05 Aligned_cols=59 Identities=12% Similarity=0.224 Sum_probs=46.6
Q ss_pred ceeEEEEcchhhhhhhcCCchhhHhhhccceeeeCceeEEc----CCCcEEEeccccceeecCCeEechHHHHHHHhcC
Q 008535 403 TLGEVMFRANTVMLGYFKNPKATEEAFRNGWYHTGDLAVRN----PDGYVQMKDRRKDIIISGAEIISSLEVEAVLLSN 477 (562)
Q Consensus 403 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 477 (562)
+.-||+|+.- .|.|+ ||.||+.++. ....+.|++|.+-+..+.|+|.+-.++..++.+.
T Consensus 408 ~~YelvvTt~---~GLyR-------------YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 408 QEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred CeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 5578888752 23343 9999998884 3467999999999999999999999998777653
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.33 E-value=0.17 Score=50.06 Aligned_cols=93 Identities=12% Similarity=0.176 Sum_probs=78.3
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
-+|+.|....+..+|+.|...|..+||+|.+...-+. .-+...+|+.++|+.++|+.+. .-+....++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 4899999999999999999999999999988877332 2277889999999999999884 345567889999999999
Q ss_pred EeccchHHHHHHHhhc
Q 008535 123 VDYQFVEVVQNALDIL 138 (562)
Q Consensus 123 ~~~~~~~~~~~~~~~~ 138 (562)
+..+..-.+.+.....
T Consensus 188 ~tps~~l~lae~~~~~ 203 (438)
T COG1541 188 ATPSYLLYLAEEAEEE 203 (438)
T ss_pred EChHHHHHHHHHHHHc
Confidence 9999887777766655
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=90.99 E-value=2.9 Score=42.79 Aligned_cols=84 Identities=12% Similarity=0.096 Sum_probs=64.4
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
-+|..++...+...+..+...|+++||++.+..+.+. ......+++..+|+.+++... .+.....++..++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 3799999999888999998899999999999887654 233456788899998876643 23456788999999988
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
......-.+
T Consensus 182 ~~ps~ll~L 190 (445)
T TIGR03335 182 ASVFKLLRL 190 (445)
T ss_pred ECHHHHHHH
Confidence 766544333
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=90.20 E-value=3.2 Score=42.12 Aligned_cols=89 Identities=9% Similarity=0.140 Sum_probs=69.0
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|..++......++..+...|+++||++....+.+. ..+...+++.+.|+..+++++.. .+.+...+++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 3688888777777888888899999999887665442 22334677889999999887654 57788999999999999
Q ss_pred EeccchHHHHHH
Q 008535 123 VDYQFVEVVQNA 134 (562)
Q Consensus 123 ~~~~~~~~~~~~ 134 (562)
........+...
T Consensus 173 ~~Ps~l~~L~~~ 184 (422)
T TIGR02155 173 VTPSYMLNLLEE 184 (422)
T ss_pred EcHHHHHHHHHH
Confidence 998876665543
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=85.54 E-value=5 Score=36.69 Aligned_cols=75 Identities=19% Similarity=0.167 Sum_probs=54.1
Q ss_pred CceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 35 DATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 35 ~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
+.++++....-.|...+...+ ...|++++|++. ..|-.- -....+++++..|++.+.+ +.++++++.+.
T Consensus 150 ~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~ 220 (227)
T TIGR03089 150 TAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQI 220 (227)
T ss_pred CcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHH
Confidence 445554433333444443332 567899999999 888764 4446789999999998888 68999999999
Q ss_pred HhhCCc
Q 008535 113 LRQLEA 118 (562)
Q Consensus 113 l~~~~~ 118 (562)
+++.++
T Consensus 221 i~~~~v 226 (227)
T TIGR03089 221 AETERV 226 (227)
T ss_pred HHhhcC
Confidence 988775
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.62 E-value=24 Score=36.69 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=64.8
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|+..+...+..... ..+++++|++...+|... .+...+++++..|+.+++. +..+.+.+.+.+++.++.+++
T Consensus 185 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 260 (513)
T PRK07656 185 MLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVLP 260 (513)
T ss_pred EEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEEe
Confidence 4789888766554433 347899999998888653 3455689999999988875 567889999999999999998
Q ss_pred EeccchHHHHH
Q 008535 123 VDYQFVEVVQN 133 (562)
Q Consensus 123 ~~~~~~~~~~~ 133 (562)
+.......+..
T Consensus 261 ~~p~~~~~l~~ 271 (513)
T PRK07656 261 GPPTMYNSLLQ 271 (513)
T ss_pred chHHHHHHHHc
Confidence 88776655443
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.83 E-value=27 Score=36.34 Aligned_cols=85 Identities=20% Similarity=0.260 Sum_probs=64.2
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPAL-YKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|++.+...+..... ..+++++|++....|....+ +...++++..|+..+..+.. +.+.+...+++.++..+++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEc
Confidence 4788888766655544 55789999999888865433 34445588899998877664 8899999999999999999
Q ss_pred eccchHHHHH
Q 008535 124 DYQFVEVVQN 133 (562)
Q Consensus 124 ~~~~~~~~~~ 133 (562)
.......+..
T Consensus 262 ~p~~~~~l~~ 271 (521)
T PRK06187 262 VPTIWQMLLK 271 (521)
T ss_pred hHHHHHHHHc
Confidence 8776665443
No 145
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=70.30 E-value=44 Score=27.61 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=56.7
Q ss_pred eeeeeccc-ccchhhHHHHHhHh-hceEEEEec-cCCHHHHHHHHHhcCeEEEEcchH------HHHHHHhccccccccc
Q 008535 240 VFLWTLDM-FRCNGWCCTWAMAA-VGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPR------ILNMIANASASDQNQL 310 (562)
Q Consensus 240 ~~l~~~pl-~~~~gl~~~~~~~~-~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~l 310 (562)
.++.+.+- .|..|+......+- .|-.++.+. ...++++.+.+.+++++++..+-. .++.+.+.... ..+
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~--~~~ 83 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIE--AGL 83 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh--cCC
Confidence 44444444 67777765444444 444455554 467899999999999999876532 22233322211 223
Q ss_pred cceEEEEEeCCCC-----hHHHHHHHHhcCCeeeccccCc
Q 008535 311 QRKVIIVIAGVLP-----TIEVLEQVANFGFNIRHAYGMT 345 (562)
Q Consensus 311 ~~l~~i~~~g~~l-----~~~~~~~~~~~~~~l~~~YG~t 345 (562)
+.+ .+++||... ..+..+.+++.| +-..|+..
T Consensus 84 ~~~-~i~vGG~~~~~~~~~~~~~~~l~~~G--~~~vf~~~ 120 (137)
T PRK02261 84 GDI-LLYVGGNLVVGKHDFEEVEKKFKEMG--FDRVFPPG 120 (137)
T ss_pred CCC-eEEEECCCCCCccChHHHHHHHHHcC--CCEEECcC
Confidence 344 456666542 345556677766 34455533
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=66.01 E-value=37 Score=35.84 Aligned_cols=82 Identities=11% Similarity=0.093 Sum_probs=62.3
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|+..+...+..+... .+++++|++....|.. ..++..+++++..|+.++......++..+...+++.++.+++
T Consensus 218 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~ 294 (559)
T PRK08315 218 TLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALY 294 (559)
T ss_pred EeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEe
Confidence 57888886555544333 5889999998887763 455566788999998888666677888899999999999998
Q ss_pred EeccchH
Q 008535 123 VDYQFVE 129 (562)
Q Consensus 123 ~~~~~~~ 129 (562)
.......
T Consensus 295 ~~P~~~~ 301 (559)
T PRK08315 295 GVPTMFI 301 (559)
T ss_pred cchHHHH
Confidence 8776543
No 147
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.50 E-value=40 Score=35.60 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=61.6
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|++.+...+..+... .+++++|++....|-. ...+..+++++..|+.++......+...+.+.+++.++..++
T Consensus 220 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~ 296 (558)
T PRK12583 220 TLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALY 296 (558)
T ss_pred EeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEe
Confidence 57898886665554433 4788999998877653 456677788899998888555567888889999999999988
Q ss_pred Eeccch
Q 008535 123 VDYQFV 128 (562)
Q Consensus 123 ~~~~~~ 128 (562)
......
T Consensus 297 ~~P~~~ 302 (558)
T PRK12583 297 GVPTMF 302 (558)
T ss_pred ccHHHH
Confidence 876644
No 148
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=64.91 E-value=29 Score=34.23 Aligned_cols=65 Identities=23% Similarity=0.204 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCC-----CCCHHHHHHHHhhCCceEEEE
Q 008535 55 CLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNT-----RLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 55 ~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~ii~ 123 (562)
...+.-.|..+++++||-|.+ .+..|+...=+++..|+.+|.++- +.+++.++..+... .|+|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 344555567778999996544 345678888899999999999864 46789999998876 677775
No 149
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=64.05 E-value=80 Score=33.25 Aligned_cols=98 Identities=7% Similarity=0.070 Sum_probs=69.0
Q ss_pred cCCceEEEEC--C-------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecC
Q 008535 33 YGDATSIIYG--T-------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALN 101 (562)
Q Consensus 33 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 101 (562)
.|+.++++.. + ..+|++.+...+.... ...+++++|++...+|... .+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4566666542 1 3589988876554433 3457888999888887542 23334567778888877765
Q ss_pred CCCCHHHHHHHHhhCCceEEEEeccchHHHHH
Q 008535 102 TRLDSATLASILRQLEAKIIFVDYQFVEVVQN 133 (562)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 133 (562)
....++.+...+++.++.++.........+..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 56788999999999999999988877665543
No 150
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=64.00 E-value=60 Score=32.57 Aligned_cols=88 Identities=10% Similarity=-0.028 Sum_probs=64.3
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.+|++. -....+|.+.+...+..... ..+++.++++....+-. ...+...+++...|+..+.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 455666666 23567888887766655444 45788999988888864 333556777788898888886
Q ss_pred cCCHHHHHHHHHhcCeEEEEc
Q 008535 271 TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~ 291 (562)
....+.+...+++.++++++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 467888999999999999996
No 151
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=62.12 E-value=50 Score=34.35 Aligned_cols=85 Identities=14% Similarity=0.001 Sum_probs=65.2
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
..+|...+...+..+... .+++++|++...+|.... .+..+++++..|+..+.. +....+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 347888887776665543 367899999999887543 345678889999988866 457889999999999999999
Q ss_pred EeccchHHHH
Q 008535 123 VDYQFVEVVQ 132 (562)
Q Consensus 123 ~~~~~~~~~~ 132 (562)
+.......+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 9887665543
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=60.57 E-value=53 Score=34.14 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=60.5
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
..+|.+.+...+... ....++.++|++...+|-... .+..+++++..|+..+..+.....+.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 347877765543322 234578899988777765432 2345678889999988876556678899999999999999
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
.-......+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 887766554
No 153
>PLN02565 cysteine synthase
Probab=57.78 E-value=1.7e+02 Score=28.34 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=62.5
Q ss_pred ceEEEECCee--ccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 36 ATSIIYGTVR--FSWRQTHQICLKLASALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 36 ~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
++.+-.+..+ =||++= -+..+-..+.+.|. .+|...++-...+-.-+...++|-.+|..+..+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 4555554433 344432 33333444555564 788666666777778888888899999988887777778888899
Q ss_pred HhhCCceEEEEecc
Q 008535 113 LRQLEAKIIFVDYQ 126 (562)
Q Consensus 113 l~~~~~~~ii~~~~ 126 (562)
++.+++++++++..
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 154
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=57.10 E-value=72 Score=31.83 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=67.4
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCC--HHHHHHHHhhCCceEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLD--SATLASILRQLEAKII 121 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~i 121 (562)
.+|++.+...+..+.. ..+++++|++....|.... .+..++..+..|+..+..++... .+.+..+++..++..+
T Consensus 139 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 215 (408)
T TIGR01733 139 VVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVL 215 (408)
T ss_pred EeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEE
Confidence 4788888777666655 4467789999888877643 45667888889988887776555 7889999999999999
Q ss_pred EEeccchHHHHHH
Q 008535 122 FVDYQFVEVVQNA 134 (562)
Q Consensus 122 i~~~~~~~~~~~~ 134 (562)
++.....+.+...
T Consensus 216 ~~~p~~~~~l~~~ 228 (408)
T TIGR01733 216 NLTPSLLALLAAA 228 (408)
T ss_pred EeCHHHHHHHHHh
Confidence 9998887776554
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=56.40 E-value=43 Score=33.92 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=61.2
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP-ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|++.+...+...+.. .+++++|++....+-.. ..+..+++++..|+..+..++. +.+.+.+++.++.++..
T Consensus 130 ~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~ 203 (436)
T TIGR01923 130 PHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISL 203 (436)
T ss_pred EEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEe
Confidence 57999988777766654 47899999988877643 2334568889999998887543 48888999999999998
Q ss_pred eccchHHH
Q 008535 124 DYQFVEVV 131 (562)
Q Consensus 124 ~~~~~~~~ 131 (562)
.......+
T Consensus 204 ~P~~l~~l 211 (436)
T TIGR01923 204 VPTQLNRL 211 (436)
T ss_pred HHHHHHHH
Confidence 87655444
No 156
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=55.68 E-value=35 Score=28.24 Aligned_cols=41 Identities=12% Similarity=0.094 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---cHHHHHHHHHhhhccce
Q 008535 56 LKLASALAQLKISRGDIVAAMAPN---IPALYKLHFAVPMAGAV 96 (562)
Q Consensus 56 ~~~a~~L~~~gv~~gd~V~i~~~~---~~~~~~~~lA~~~~G~~ 96 (562)
+.++..|.+.|+.+.+.|++++.. +.....+++++-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999975 56666777778888865
No 157
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=55.01 E-value=60 Score=23.43 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=52.1
Q ss_pred eccHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceE
Q 008535 45 RFSWRQTHQICLKLAS---ALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKI 120 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~---~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 120 (562)
..||+||.+.-..++. .|....++..|-++|+.=++... ..++.++...+.++++.-+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 4799999988877765 45566788899999998776532 35788899999999999999988875
No 158
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=51.62 E-value=2e+02 Score=30.37 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=62.2
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|.+.+...+.... ...++.++|++....|-... .+...++.+..|+..+.. +......+...+++.++.++..
T Consensus 191 ~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 266 (563)
T PLN02860 191 TISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMIT 266 (563)
T ss_pred EeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEe
Confidence 478887765544432 34578999998888875432 234567778888887765 4678899999999999999999
Q ss_pred eccchHHHHH
Q 008535 124 DYQFVEVVQN 133 (562)
Q Consensus 124 ~~~~~~~~~~ 133 (562)
.......+..
T Consensus 267 ~P~~~~~l~~ 276 (563)
T PLN02860 267 VPAMMADLIS 276 (563)
T ss_pred ChHHHHHHHH
Confidence 8877665544
No 159
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=51.53 E-value=86 Score=32.26 Aligned_cols=84 Identities=13% Similarity=0.136 Sum_probs=62.0
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|++.+...+.... ...+++++|++...+|-... .+..+++.+..|+.++..+ ..+...+.+.+++.++.++..
T Consensus 160 ~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 235 (483)
T PRK03640 160 IQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISV 235 (483)
T ss_pred EEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEe
Confidence 478887766543332 33688999999998886432 2344677778898887665 578899999999999999999
Q ss_pred eccchHHHH
Q 008535 124 DYQFVEVVQ 132 (562)
Q Consensus 124 ~~~~~~~~~ 132 (562)
.......+.
T Consensus 236 ~P~~~~~l~ 244 (483)
T PRK03640 236 VSTMLQRLL 244 (483)
T ss_pred HHHHHHHHH
Confidence 887666554
No 160
>PRK11761 cysM cysteine synthase B; Provisional
Probab=51.45 E-value=1.6e+02 Score=28.17 Aligned_cols=87 Identities=15% Similarity=0.089 Sum_probs=59.1
Q ss_pred ceEEEECC--eeccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 36 ATSIIYGT--VRFSWRQTHQICLKLASALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
++.+-.++ .+=|+++ +-+..+...+.+.| +++|+.|+. ...+-.-..+.++|...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 56555554 3345555 22333444455556 467776544 566777778888888899887766666666677888
Q ss_pred HhhCCceEEEEec
Q 008535 113 LRQLEAKIIFVDY 125 (562)
Q Consensus 113 l~~~~~~~ii~~~ 125 (562)
++.+++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 161
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=51.08 E-value=53 Score=32.71 Aligned_cols=59 Identities=22% Similarity=0.232 Sum_probs=38.6
Q ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC-----CCHHHHHHHHhhCCceEEEEe
Q 008535 62 LAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR-----LDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 62 L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 124 (562)
+...++++||.|++-.+.. .....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~~t~---~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYTF---VSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 4445789999988755543 34445566778887777533 456777777654 56777654
No 162
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=50.39 E-value=50 Score=28.68 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=32.7
Q ss_pred chHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhccC
Q 008535 466 SSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGDEL 522 (562)
Q Consensus 466 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~~l 522 (562)
-...|++.+.+.++|.++.|+...+. .++.|.++.. ....+++++.+.+.+
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~-----a~Vav~~~~~-~~~~~~i~~~V~~~v 126 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN-----AYVAVDLDFN-RFNTKKIKKKVEKAV 126 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE-----EEEEEEeccc-ccchhHHHHHHHHHH
Confidence 45678899999999999999976443 4444454422 344445555554443
No 163
>PLN03052 acetate--CoA ligase; Provisional
Probab=49.57 E-value=1.5e+02 Score=32.77 Aligned_cols=99 Identities=13% Similarity=0.016 Sum_probs=68.8
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.+|++.-..+..+.+ ...+|.+.|...+..... ..+++++|++...+|..- -.+...+++...|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeCC
Confidence 345666654433222222 246888887666655444 458999999999999643 33445677777888877775
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchHH
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPRI 295 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~~ 295 (562)
.+.++.+...++..++.++++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 5788999999999999999987654
No 164
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=48.26 E-value=62 Score=27.48 Aligned_cols=64 Identities=17% Similarity=0.115 Sum_probs=36.9
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCC-CCCHHHHHHHHhccCCC-CCCCcEEEeec
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGR-EASPEELVTFCGDELPS-CMVPRAIFFED 535 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~-~~~~~~l~~~~~~~l~~-~~~p~~i~~~~ 535 (562)
...|.+.+.++|+|.++.++...+. .+|++ .++... ....+++++.+.+.+-. ......+++..
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~----A~Vgv-~~~~~~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVsa 121 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY----AYVGV-DLTNGLEGSVTDELKEKVAETVKSTDNRIANVYVSA 121 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE----EEEEE-EcCCCcchhhHHHHHHHHHHHHHhhCCCcceEEEEc
Confidence 4577888899999999999876443 23333 333332 22345666666554433 33334455443
No 165
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=48.19 E-value=1.4e+02 Score=28.48 Aligned_cols=60 Identities=18% Similarity=0.120 Sum_probs=48.7
Q ss_pred cC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 65 LK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 65 ~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
.| +++|+ .+|=.-.+---+...+.|...|..++.+=|.....+.+.+|+.+++.+++++.
T Consensus 56 ~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45 89998 55556666677777788888898888887777777889999999999999987
No 166
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=48.12 E-value=1.1e+02 Score=32.44 Aligned_cols=85 Identities=13% Similarity=0.014 Sum_probs=62.8
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA--LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|.+.+...+.. .....+++++|++....+.... ....+++.+..|+..+......+++.+...+++.++.+++
T Consensus 224 ~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~ 300 (570)
T PRK04319 224 LHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWY 300 (570)
T ss_pred EEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEE
Confidence 4788877554433 3334678899987766655433 2456778889999888877778899999999999999999
Q ss_pred EeccchHHHH
Q 008535 123 VDYQFVEVVQ 132 (562)
Q Consensus 123 ~~~~~~~~~~ 132 (562)
........+.
T Consensus 301 ~~P~~~~~l~ 310 (570)
T PRK04319 301 TAPTAIRMLM 310 (570)
T ss_pred eCHHHHHHHH
Confidence 9887666554
No 167
>PRK08308 acyl-CoA synthetase; Validated
Probab=47.52 E-value=2.2e+02 Score=28.62 Aligned_cols=85 Identities=15% Similarity=0.195 Sum_probs=62.5
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|++.+...+..+... .++.++|++...+|..- .++..+++++..|+..+..+ ..+++.+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 357998887766555443 45678898888877653 34566788899998887765 4567888889999999998
Q ss_pred EEeccchHHHH
Q 008535 122 FVDYQFVEVVQ 132 (562)
Q Consensus 122 i~~~~~~~~~~ 132 (562)
+........+.
T Consensus 195 ~~~P~~~~~l~ 205 (414)
T PRK08308 195 YAVPLMLHILG 205 (414)
T ss_pred EcCHHHHHHHH
Confidence 88876655443
No 168
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=47.39 E-value=1.5e+02 Score=31.57 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=74.5
Q ss_pred HHcCCceEEEEC---------CeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH-HHhhhccceEEec
Q 008535 31 HVYGDATSIIYG---------TVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLH-FAVPMAGAVLSAL 100 (562)
Q Consensus 31 ~~~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~-lA~~~~G~~~v~l 100 (562)
...|+.+|.+.. +.-+||+-+...+..+...+. -++++|+++.++|-.--+=-++ +++...|.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 356777775541 246999999999988887776 5789999999999875443333 4444444444433
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHh
Q 008535 101 NTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALD 136 (562)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 136 (562)
..+...+..-+.+.+|.+++.-+..++.+.....
T Consensus 265 --~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~ 298 (613)
T COG1022 265 --KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIM 298 (613)
T ss_pred --cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHH
Confidence 3467889999999999999999888887776554
No 169
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=47.29 E-value=1.6e+02 Score=30.49 Aligned_cols=84 Identities=18% Similarity=0.068 Sum_probs=62.2
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA--LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|++.+...+.... ....+++++|++....|.... +...+++.+..|+.++..++..+...+...+++.++.++
T Consensus 179 v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (508)
T TIGR02262 179 VVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIF 256 (508)
T ss_pred EEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 3478888876554322 234588999999888776543 344567778889888887777788999999999999999
Q ss_pred EEeccchH
Q 008535 122 FVDYQFVE 129 (562)
Q Consensus 122 i~~~~~~~ 129 (562)
+.......
T Consensus 257 ~~~P~~~~ 264 (508)
T TIGR02262 257 YGVPTLYA 264 (508)
T ss_pred ecchHHHH
Confidence 99876544
No 170
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=47.05 E-value=59 Score=28.53 Aligned_cols=56 Identities=20% Similarity=0.219 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 49 RQTHQICLKLASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 49 ~el~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
+...++.+.++.++.+ ++++++|+..+++.+ |..++|+ ++....++-++++|....
T Consensus 83 ss~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 83 SSYLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred cchhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 3457788889988765 899999988777764 5566766 577888888999887654
No 171
>PLN02736 long-chain acyl-CoA synthetase
Probab=46.73 E-value=3.6e+02 Score=29.15 Aligned_cols=100 Identities=13% Similarity=-0.006 Sum_probs=69.9
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.+...+..... ..+++++|++...++....+ +...+++...|+..+.+. ...++.+...+++.++++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 45788887766655444 45899999998888864432 234566777888887665 57889999999999999999
Q ss_pred cchHHHHHHHhccccccccccceEEEEEe
Q 008535 291 GQPRILNMIANASASDQNQLQRKVIIVIA 319 (562)
Q Consensus 291 ~~p~~~~~l~~~~~~~~~~l~~l~~i~~~ 319 (562)
..+..+..+..... .++.++.++.-
T Consensus 156 ~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 99887776654321 23445555543
No 172
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=46.67 E-value=45 Score=33.01 Aligned_cols=89 Identities=22% Similarity=0.203 Sum_probs=56.4
Q ss_pred hHHHHH-HHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec
Q 008535 22 PIDFLE-RAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL 100 (562)
Q Consensus 22 i~~~l~-~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (562)
..+.|+ +.++....+-++...+.+ ..+-..|...|+++||.|++-.-. +....-|+..+|+.++++
T Consensus 26 ~~~~fE~~~a~~~g~~~~~~~~sgt----------~Al~~al~~l~~~~gdeVi~p~~t---~~~~~~ai~~~G~~pv~~ 92 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYAVAVSSGT----------SALHLALRALGLGPGDEVIVPAYT---FPATASAILWAGAEPVFV 92 (363)
T ss_dssp HHHHHHHHHHHHHTSSEEEEESSHH----------HHHHHHHHHTTGGTTSEEEEESSS----THHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHhCCCeEEEeCChh----------HHHHHHHHhcCCCcCceEecCCCc---chHHHHHHHHhccEEEEE
Confidence 344444 444445666666665432 345555667999999999887544 446667888899998888
Q ss_pred CC-----CCCHHHHHHHHhhCCceEEEEe
Q 008535 101 NT-----RLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 101 ~~-----~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
+- ..+++.+...+..-. ++|+..
T Consensus 93 Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 93 DIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp -BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred eccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 64 356788888876544 666653
No 173
>PLN03013 cysteine synthase
Probab=46.06 E-value=2.1e+02 Score=28.95 Aligned_cols=66 Identities=20% Similarity=0.115 Sum_probs=51.9
Q ss_pred HHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 61 ALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 61 ~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
.+.+.| +++|...++-...+-.-+.+.++|...|..+..+-|...+++....++.+++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344455 578866667777788888888889999988777767667778888999999999999764
No 174
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=46.00 E-value=1.7e+02 Score=32.19 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=58.6
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|.+.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+.......+...+++.++..+
T Consensus 383 v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 35899888776665543 34789999998888863 34455678888899988876654555667778888998888
Q ss_pred EEeccc
Q 008535 122 FVDYQF 127 (562)
Q Consensus 122 i~~~~~ 127 (562)
+.-...
T Consensus 460 ~~~p~~ 465 (718)
T PRK08043 460 FGTSTF 465 (718)
T ss_pred EchHHH
Confidence 766543
No 175
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=45.93 E-value=2e+02 Score=27.12 Aligned_cols=68 Identities=26% Similarity=0.243 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCC----CHHHHHHHHhhCCceEEEEecc
Q 008535 53 QICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRL----DSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 53 ~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
.|+..+|+.|.+.| -.|.+++......+... +...|..+..++... ..+++...+++.+++++++|..
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y 89 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY 89 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC
Confidence 46777999997754 46777777765554433 357777777775433 3456888999999999999874
No 176
>PRK08316 acyl-CoA synthetase; Validated
Probab=45.53 E-value=1.2e+02 Score=31.46 Aligned_cols=83 Identities=14% Similarity=0.050 Sum_probs=61.5
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|++.+... ++......+++++|++....|-.. .+...+++++..|+..++.+ ..+.+.+...+++.++.+++
T Consensus 190 ~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 265 (523)
T PRK08316 190 MLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSFF 265 (523)
T ss_pred EEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEEE
Confidence 4788887654 334455568999999988877643 33445677888999988875 45788999999999999999
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
+.......+
T Consensus 266 ~~P~~~~~l 274 (523)
T PRK08316 266 APPTVWISL 274 (523)
T ss_pred eCHHHHHHH
Confidence 887655443
No 177
>PLN03102 acyl-activating enzyme; Provisional
Probab=45.41 E-value=1.7e+02 Score=31.09 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=61.2
Q ss_pred EeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|.+.+...+...... .+++++|++...+|..- .-....++++..|+..+.+. ...++.+...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 58888887666655544 47899999999888643 22334667777888877775 468899999999999999998
Q ss_pred chHHHHHH
Q 008535 292 QPRILNMI 299 (562)
Q Consensus 292 ~p~~~~~l 299 (562)
.+.....+
T Consensus 118 ~~~~~~~~ 125 (579)
T PLN03102 118 DRSFEPLA 125 (579)
T ss_pred ChhhHHHH
Confidence 76655433
No 178
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=44.71 E-value=97 Score=30.80 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=39.0
Q ss_pred HHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC-----CCHHHHHHHHhhCCceEEEEe
Q 008535 63 AQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR-----LDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 63 ~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 124 (562)
...++++||.|++-.+..+.. ..++...|+.++.++.+ .+.+.++..+.. ++++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~~~---~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFVST---ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 345788999988866655433 44566778887777532 457888887765 56766643
No 179
>PRK09274 peptide synthase; Provisional
Probab=44.04 E-value=2.1e+02 Score=30.09 Aligned_cols=97 Identities=11% Similarity=-0.011 Sum_probs=63.3
Q ss_pred CCCceEEEeccCCC-CCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc
Q 008535 196 ECDPISVNYTSGST-GDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT 271 (562)
Q Consensus 196 ~~~~a~i~~TSGtT-G~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~ 271 (562)
++.++++....+++ ...+...+|.+.+...+..... ..+++++|++...++... .-....++++..|+..+.+++
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEcCC
Confidence 34555554322221 2223336888887666655444 347899999998887543 233456677778888777754
Q ss_pred -CCHHHHHHHHHhcCeEEEEcch
Q 008535 272 -VSAKIIFDSILIHKVTHLCGQP 293 (562)
Q Consensus 272 -~~~~~~~~~i~~~~~t~l~~~p 293 (562)
...+.+...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 5677888888999999888754
No 180
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=43.31 E-value=2.7e+02 Score=25.94 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=51.2
Q ss_pred cHHHHHHH-HHHHHHHHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhc------c--ceEEecCCC---CCHHHHHHHH
Q 008535 47 SWRQTHQI-CLKLASALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMA------G--AVLSALNTR---LDSATLASIL 113 (562)
Q Consensus 47 Ty~el~~~-~~~~a~~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~l~~~l 113 (562)
++..+.+. ..++.+.+.+.+ +.+|++|+|.+.-+.+++++++.+... | ..++.++.. +..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 34444442 344555566654 688999999999999999888777442 2 345555543 3445556777
Q ss_pred hhCCceEEEEec
Q 008535 114 RQLEAKIIFVDY 125 (562)
Q Consensus 114 ~~~~~~~ii~~~ 125 (562)
+..+..+.+.+.
T Consensus 84 ~~lgI~~~v~~~ 95 (258)
T PRK10696 84 ESLGVPYHIEEQ 95 (258)
T ss_pred HHhCCCEEEEEe
Confidence 777777766653
No 181
>PRK06164 acyl-CoA synthetase; Validated
Probab=43.06 E-value=2e+02 Score=30.14 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=63.5
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP-ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|...+...+..++..+ ++.++|++...+|..- -.+..+++.+..|+.++.. +......+...+++.++..++.
T Consensus 200 ~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~ 275 (540)
T PRK06164 200 LHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTFG 275 (540)
T ss_pred EEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeecC
Confidence 478888876666555444 6789999998888752 2345678888889887766 4567888999999999999998
Q ss_pred eccchHHHHH
Q 008535 124 DYQFVEVVQN 133 (562)
Q Consensus 124 ~~~~~~~~~~ 133 (562)
.......+..
T Consensus 276 ~p~~l~~l~~ 285 (540)
T PRK06164 276 NDEMLRRILD 285 (540)
T ss_pred CHHHHHHHHH
Confidence 8776655443
No 182
>PRK07638 acyl-CoA synthetase; Validated
Probab=43.03 E-value=1.8e+02 Score=29.90 Aligned_cols=85 Identities=7% Similarity=0.037 Sum_probs=62.5
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..+++.+...+++.++.++..
T Consensus 162 ~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 237 (487)
T PRK07638 162 LRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYT 237 (487)
T ss_pred EEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEe
Confidence 478877765554333 34578899999887766543 355667778889888765 5678899999999999999999
Q ss_pred eccchHHHHH
Q 008535 124 DYQFVEVVQN 133 (562)
Q Consensus 124 ~~~~~~~~~~ 133 (562)
.......+..
T Consensus 238 ~P~~~~~l~~ 247 (487)
T PRK07638 238 VPTMLESLYK 247 (487)
T ss_pred CcHHHHHHHh
Confidence 8877665543
No 183
>PLN02246 4-coumarate--CoA ligase
Probab=42.87 E-value=2e+02 Score=30.09 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=60.4
Q ss_pred eEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
-.+|+..+...+...... .++.++|++....+-.. ..+...++++..|...+.+++ .....+...++..++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 468999887666555443 47889999988877542 333456667777888777654 6778888999999999998
Q ss_pred cchHHHHHH
Q 008535 291 GQPRILNMI 299 (562)
Q Consensus 291 ~~p~~~~~l 299 (562)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 876655544
No 184
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.86 E-value=2.1e+02 Score=30.03 Aligned_cols=83 Identities=14% Similarity=0.057 Sum_probs=61.2
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|+..+...+..... ..+++++|++....|-.. .++..+++++..|+.++..+ ..+.+.+...+++.++.++
T Consensus 208 v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~ 283 (546)
T PRK08314 208 CMHTHRTVMANAVGSVL---WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHW 283 (546)
T ss_pred EEEecHHHHHHHHHHHH---hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCcee
Confidence 35788888776554433 346788999888777543 34566778899999988875 4678889999999999998
Q ss_pred EEeccchHH
Q 008535 122 FVDYQFVEV 130 (562)
Q Consensus 122 i~~~~~~~~ 130 (562)
.........
T Consensus 284 ~~~p~~~~~ 292 (546)
T PRK08314 284 TNIPTMVVD 292 (546)
T ss_pred cccHHHHHH
Confidence 887765443
No 185
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=42.04 E-value=2.8e+02 Score=29.07 Aligned_cols=83 Identities=13% Similarity=0.126 Sum_probs=61.5
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|+..+...+... ....+++++|++....|-.- .++..+++++..|+.++..+ ..+.+.+...+++.++..++
T Consensus 216 ~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~ 291 (547)
T PRK13295 216 MHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTM 291 (547)
T ss_pred EeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEE
Confidence 47888876655543 34467889999988888753 34566788889998877654 56789999999999999888
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
........+
T Consensus 292 ~~p~~~~~l 300 (547)
T PRK13295 292 ASTPFLTDL 300 (547)
T ss_pred ecHHHHHHH
Confidence 876655443
No 186
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=41.81 E-value=3.3e+02 Score=26.29 Aligned_cols=90 Identities=12% Similarity=0.031 Sum_probs=58.5
Q ss_pred CCceEEEECCe--eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHH
Q 008535 34 GDATSIIYGTV--RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLAS 111 (562)
Q Consensus 34 p~~~a~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (562)
+.++.+-.++. .=|+++-. +...-..+.+.|..+++.|+... .+-.-..+.++|...|..+..+-|...+.....
T Consensus 15 g~~i~~K~E~~nptGS~K~R~--a~~~l~~a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 91 (316)
T cd06448 15 GCNVFLKLENLQPSGSFKIRG--IGHLCQKSAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVE 91 (316)
T ss_pred CCeEEEEeccCCCcCChHHHH--HHHHHHHHHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 34566655542 33555421 22222223333434466665544 577777888899999998877777767777889
Q ss_pred HHhhCCceEEEEecc
Q 008535 112 ILRQLEAKIIFVDYQ 126 (562)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (562)
.++.+++++++++..
T Consensus 92 ~l~~~GA~v~~~~~~ 106 (316)
T cd06448 92 KLRDEGATVVVHGKV 106 (316)
T ss_pred HHHHcCCEEEEECCc
Confidence 999999999998765
No 187
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=41.55 E-value=48 Score=31.40 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=42.9
Q ss_pred eccHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 45 RFSWRQTHQ-----ICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 45 ~~Ty~el~~-----~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
.+.|.++.+ ....+...|.+.|+.+++.|+++|.++...-.+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 477788764 2466777788899999999999999999998899999888975
No 188
>PRK07788 acyl-CoA synthetase; Validated
Probab=41.30 E-value=1.7e+02 Score=30.72 Aligned_cols=85 Identities=12% Similarity=0.066 Sum_probs=60.5
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPAL-YKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|...+...+. ......+++++|++....|..-.+ +..+++++..|+.++.. ...+++.+...+++.++..++.
T Consensus 226 ~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 301 (549)
T PRK07788 226 PRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVV 301 (549)
T ss_pred eccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEE
Confidence 467766655433 334456788999988877764332 23456677889887766 5678889999999999999999
Q ss_pred eccchHHHHH
Q 008535 124 DYQFVEVVQN 133 (562)
Q Consensus 124 ~~~~~~~~~~ 133 (562)
.......+..
T Consensus 302 ~P~~~~~l~~ 311 (549)
T PRK07788 302 VPVMLSRILD 311 (549)
T ss_pred HHHHHHHHHh
Confidence 8876665543
No 189
>PRK06188 acyl-CoA synthetase; Validated
Probab=41.09 E-value=1.7e+02 Score=30.55 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=63.1
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEe
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
.+|+..+...+.. .....++..+|++....|-...+...+++.+..|+..+..+ ...++.+...+++.++.+++..
T Consensus 187 ~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 262 (524)
T PRK06188 187 MGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLV 262 (524)
T ss_pred eeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEeh
Confidence 4778777665543 33446788999999999887666667788888898888775 4678889999999999999987
Q ss_pred ccchHHH
Q 008535 125 YQFVEVV 131 (562)
Q Consensus 125 ~~~~~~~ 131 (562)
......+
T Consensus 263 P~~l~~l 269 (524)
T PRK06188 263 PTMIYAL 269 (524)
T ss_pred HHHHHHH
Confidence 7655443
No 190
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=40.89 E-value=1.4e+02 Score=31.36 Aligned_cols=89 Identities=11% Similarity=-0.047 Sum_probs=69.5
Q ss_pred ceEeechhHHHHHHHHHhhc-----CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeE
Q 008535 214 GVVYSHRGAYLNSLAQISRC-----DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVT 287 (562)
Q Consensus 214 ~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t 287 (562)
|..+|+..+...+......+ +++.+|++....|....+. ...+++...|+.+.... ..+...+...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 88999999887777666654 2788999999999755332 34566677777777665 47899999999999999
Q ss_pred EEEcchHHHHHHHhcc
Q 008535 288 HLCGQPRILNMIANAS 303 (562)
Q Consensus 288 ~l~~~p~~~~~l~~~~ 303 (562)
+++.....+..+....
T Consensus 122 iif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEAT 137 (537)
T ss_pred EEEEcCchHHHHHHHH
Confidence 9999999888886543
No 191
>PLN02654 acetate-CoA ligase
Probab=40.58 E-value=2.1e+02 Score=31.16 Aligned_cols=80 Identities=13% Similarity=0.028 Sum_probs=60.8
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.|...+..... ..+++++|++...+|... -.+...+++...|+..+.+. .+.++.+...++..++.+++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 56899988766665544 458999999999988643 23345667777888877764 57889999999999999999
Q ss_pred cchHH
Q 008535 291 GQPRI 295 (562)
Q Consensus 291 ~~p~~ 295 (562)
+...+
T Consensus 198 ~~~~~ 202 (666)
T PLN02654 198 TCNAV 202 (666)
T ss_pred EcCcc
Confidence 76553
No 192
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.57 E-value=2.6e+02 Score=29.60 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=61.4
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPAL-YKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|+..+...+..+. .....++.++|++...+|-...+ +...++.+..|+..+...+..+++.+...+++.++.+++.
T Consensus 200 ~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 278 (576)
T PRK05620 200 VYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHG 278 (576)
T ss_pred EEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeee
Confidence 578887765443322 12235788999998888875443 3345777888888877766778999999999999999998
Q ss_pred eccchHHH
Q 008535 124 DYQFVEVV 131 (562)
Q Consensus 124 ~~~~~~~~ 131 (562)
.......+
T Consensus 279 ~P~~~~~l 286 (576)
T PRK05620 279 VPTLWIQL 286 (576)
T ss_pred cCHHHHHH
Confidence 77665443
No 193
>PRK07476 eutB threonine dehydratase; Provisional
Probab=40.24 E-value=2.9e+02 Score=26.72 Aligned_cols=57 Identities=19% Similarity=0.116 Sum_probs=42.8
Q ss_pred EEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHH
Q 008535 75 AMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVV 131 (562)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (562)
+....+-.-..+.++|.+.|..+..+-|...++.....++.+++.+++++....+..
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~~ 127 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDAQ 127 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 344667777888888999998876666666666677888999999999986544333
No 194
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=40.09 E-value=1.5e+02 Score=30.17 Aligned_cols=17 Identities=12% Similarity=0.147 Sum_probs=9.7
Q ss_pred CHHHHHHHHHhcC-eEEE
Q 008535 273 SAKIIFDSILIHK-VTHL 289 (562)
Q Consensus 273 ~~~~~~~~i~~~~-~t~l 289 (562)
+...+.+.++++. +..+
T Consensus 299 Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 299 NALAVAKWLADHERIEWV 316 (432)
T ss_pred HHHHHHHHHHhCCCcceE
Confidence 5556666666653 4444
No 195
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.04 E-value=2.9e+02 Score=29.06 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=71.1
Q ss_pred cCCceEEEEC--C-------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecC
Q 008535 33 YGDATSIIYG--T-------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALN 101 (562)
Q Consensus 33 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 101 (562)
.|+.+|++.. + ..+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 3667776542 1 4589999998876666665542 78888888888875 455667888899999988887
Q ss_pred C-CCCHHHHHHHHhhCCceEEEEeccchHH
Q 008535 102 T-RLDSATLASILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 102 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 130 (562)
+ .+.++.+...+...++..+..-......
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 5 6889889999988887777766655544
No 196
>PRK05852 acyl-CoA synthetase; Validated
Probab=39.84 E-value=2.4e+02 Score=29.53 Aligned_cols=86 Identities=12% Similarity=0.124 Sum_probs=62.8
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEec-CCCCCHHHHHHHHhhCCceEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSAL-NTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~i 121 (562)
.+|+..+...+..+... .+++++|++....|... .++..+++++..|...+.. ....+...+...+++.++..+
T Consensus 195 ~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 271 (534)
T PRK05852 195 PWTHANIASSVRAIITG---YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWY 271 (534)
T ss_pred EecHHHHHHHHHHHHHH---hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEE
Confidence 47888887766655543 46889998888877653 4556678888888765542 335677888999999999999
Q ss_pred EEeccchHHHHH
Q 008535 122 FVDYQFVEVVQN 133 (562)
Q Consensus 122 i~~~~~~~~~~~ 133 (562)
+........+..
T Consensus 272 ~~~P~~~~~l~~ 283 (534)
T PRK05852 272 TAVPTIHQILLE 283 (534)
T ss_pred EcChHHHHHHHh
Confidence 988877665544
No 197
>PRK06381 threonine synthase; Validated
Probab=39.36 E-value=3.6e+02 Score=26.01 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=61.5
Q ss_pred HHHHHHHcC-CceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCC
Q 008535 26 LERAAHVYG-DATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNT 102 (562)
Q Consensus 26 l~~~a~~~p-~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 102 (562)
+.+..+..+ .++.+-.++.+ =|+++ +.+......+.+.|. ++| +....+-.-+.+.++|...|..+..+-|
T Consensus 21 ~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp 94 (319)
T PRK06381 21 ARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIP 94 (319)
T ss_pred hHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEEC
Confidence 344444443 46777666533 34444 222223333444452 344 4566788888888999999988776655
Q ss_pred CCCHHHHHHHHhhCCceEEEEeccchHH
Q 008535 103 RLDSATLASILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 130 (562)
...+......++.+++++++++....+.
T Consensus 95 ~~~~~~~~~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 95 RSYSNSRVKEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred CCCCHHHHHHHHHcCCEEEEcCCCHHHH
Confidence 5555566678999999999998764433
No 198
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=39.26 E-value=4.2e+02 Score=27.21 Aligned_cols=82 Identities=9% Similarity=0.006 Sum_probs=63.3
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--cHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPN--IPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
.++|--.+.+.+..++.. .|+...+++.+-.|- +.-.++..+|+++.|++.|.-.|.+.+..+-+.+.+.++..+
T Consensus 252 atLsH~~~~Nna~~vg~r---~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l 328 (596)
T KOG1177|consen 252 ATLSHYNFLNNARAVGAR---AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTL 328 (596)
T ss_pred eeeehhhhhhhHHHHHHH---hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEE
Confidence 578988888888777654 355554444443332 345578899999999999999999999999999999999999
Q ss_pred EEeccch
Q 008535 122 FVDYQFV 128 (562)
Q Consensus 122 i~~~~~~ 128 (562)
+....-.
T Consensus 329 ~gtPtM~ 335 (596)
T KOG1177|consen 329 YGTPTMF 335 (596)
T ss_pred ecChHHH
Confidence 9887543
No 199
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=39.06 E-value=2.1e+02 Score=27.27 Aligned_cols=89 Identities=16% Similarity=0.093 Sum_probs=57.4
Q ss_pred CceEEEECCee--ccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHH
Q 008535 35 DATSIIYGTVR--FSWRQTHQICLKLASALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLAS 111 (562)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (562)
.++.+-.++.+ -|++. +.+..+...+.+.| +.+|+.| +....+-.-..+.++|.+.|..+..+-|...+.....
T Consensus 22 ~~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 35555554432 34553 22333333444555 3677766 4566677777777888889988766666555566678
Q ss_pred HHhhCCceEEEEecc
Q 008535 112 ILRQLEAKIIFVDYQ 126 (562)
Q Consensus 112 ~l~~~~~~~ii~~~~ 126 (562)
.++.+++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998764
No 200
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=38.66 E-value=99 Score=27.45 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=0.0
Q ss_pred CCCCeeeeeccc-ccchhhHHHHHhHhhceEEEEe--ccCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccc
Q 008535 236 RDMPVFLWTLDM-FRCNGWCCTWAMAAVGGINVCI--RTVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQR 312 (562)
Q Consensus 236 ~~~~~~l~~~pl-~~~~gl~~~~~~~~~g~~~v~~--~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~ 312 (562)
..+..++.+.+- .|..|....-..+-..|--++. ....++.+.+.+++.+|+++..+-..-..+....+....--+.
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHc
Q ss_pred -eE---EEEEeCCCChHHHHHHH
Q 008535 313 -KV---IIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 313 -l~---~i~~~g~~l~~~~~~~~ 331 (562)
++ .+++||.+++++..+.+
T Consensus 163 ~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 163 GYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred CCCCCCEEEEEChhcCHHHHHHh
No 201
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=38.65 E-value=1.3e+02 Score=29.94 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC-----CCHHHHHHHHhhCCceEEE
Q 008535 57 KLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR-----LDSATLASILRQLEAKIIF 122 (562)
Q Consensus 57 ~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 122 (562)
.+...|...++++||.|++..+... ....++...|+.++.++-+ .+.+.++..+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~~~---~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLTWV---STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCcHH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444555667899998876554433 3344556788887776532 457778777754 566666
No 202
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=38.59 E-value=2.1e+02 Score=30.69 Aligned_cols=96 Identities=13% Similarity=-0.004 Sum_probs=66.9
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.+|++.... .+| ....+|.+.+...+..... ..+++++|++...+|... -.+...+++...|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 455666654322 122 2456888887666655444 457899999999988643 33445667777888877765
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchH
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPR 294 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~ 294 (562)
.+.++.+...++..++.++++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578889999999999999988654
No 203
>PLN00011 cysteine synthase
Probab=38.47 E-value=2.3e+02 Score=27.55 Aligned_cols=66 Identities=18% Similarity=0.069 Sum_probs=49.2
Q ss_pred HHHHHcC-CCCC-CEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 60 SALAQLK-ISRG-DIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 60 ~~L~~~g-v~~g-d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
....+.| +.+| +.|+ ....+-.-..+.++|..+|..+..+-|...++.....++.+++.+++++..
T Consensus 57 ~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 57 KDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3344445 6777 5554 467777888888889999988776666555577788999999999998864
No 204
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=38.42 E-value=3.2e+02 Score=26.09 Aligned_cols=90 Identities=11% Similarity=0.041 Sum_probs=57.5
Q ss_pred CceEEEECCeecc--HHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHH
Q 008535 35 DATSIIYGTVRFS--WRQTHQICLKLASALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLAS 111 (562)
Q Consensus 35 ~~~a~~~~~~~~T--y~el~~~~~~~a~~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (562)
.++.+-.++.+-| +++ +.+........+.| +.+|++| +....+-.-..+.++|.+.|..+..+-|....+....
T Consensus 21 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKD--RIALNMIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred ceEEEEEcccCCCCcchH--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 3555555554433 332 12222233444556 4777766 5666666777777788889988766666555556688
Q ss_pred HHhhCCceEEEEeccc
Q 008535 112 ILRQLEAKIIFVDYQF 127 (562)
Q Consensus 112 ~l~~~~~~~ii~~~~~ 127 (562)
.++.+++.+++++...
T Consensus 98 ~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 98 LLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCEEEEECCCC
Confidence 8999999999998753
No 205
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=38.39 E-value=3.3e+02 Score=25.85 Aligned_cols=66 Identities=14% Similarity=0.085 Sum_probs=48.8
Q ss_pred HHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccc
Q 008535 61 ALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQF 127 (562)
Q Consensus 61 ~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 127 (562)
.+.+.|. ++|+.|+ ....+-.-....++|.++|..+..+-|..........++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3444553 4566654 4677788888888999999887766666555667788999999999998764
No 206
>PLN02614 long-chain acyl-CoA synthetase
Probab=38.15 E-value=2.7e+02 Score=30.28 Aligned_cols=87 Identities=15% Similarity=0.082 Sum_probs=63.1
Q ss_pred eeccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCce
Q 008535 44 VRFSWRQTHQICLKLASALAQ--LKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAK 119 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~--~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 119 (562)
..+|.+.+...+..+...+.. .++.++|++..++|-. .+.. ..+.++..|+.++... .+.+.+...++..++.
T Consensus 241 V~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T 317 (666)
T PLN02614 241 VMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR--GDVKLLIEDLGELKPT 317 (666)
T ss_pred EEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCe
Confidence 458998888776665554422 3678899999998865 3443 3455677888877653 3678899999999999
Q ss_pred EEEEeccchHHHHH
Q 008535 120 IIFVDYQFVEVVQN 133 (562)
Q Consensus 120 ~ii~~~~~~~~~~~ 133 (562)
+++.-....+.+..
T Consensus 318 ~~~~vP~~~~~l~~ 331 (666)
T PLN02614 318 IFCAVPRVLDRVYS 331 (666)
T ss_pred EEEecHHHHHHHHH
Confidence 99998877766543
No 207
>PRK07529 AMP-binding domain protein; Validated
Probab=38.08 E-value=2.4e+02 Score=30.45 Aligned_cols=96 Identities=13% Similarity=0.052 Sum_probs=62.8
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEe-c
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCI-R 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~-~ 270 (562)
.++.+|++....+.. ..+...+|.+.+......... ..++++++++...+|....+ +...+++...| ..+.+ +
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G-i~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAG-IANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhC-EEEeCCC
Confidence 455666665533221 123467899887666555444 45789999999999865432 33455555555 44433 3
Q ss_pred cCCHHHHHHHHHhcCeEEEEcch
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQP 293 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p 293 (562)
...++.+...+++.++.+++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEeC
Confidence 56888999999999999998753
No 208
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=37.88 E-value=76 Score=25.05 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 56 LKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 56 ~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
..+...+...|+.+++.|+++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45667778889999999999999987777777777778863
No 209
>PRK10717 cysteine synthase A; Provisional
Probab=37.55 E-value=2.2e+02 Score=27.62 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=47.6
Q ss_pred HHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 62 LAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 62 L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
+.+.| +++|+.|+ .+..+-.-..+.++|.++|..+..+-|...++.....++.+++++++++..
T Consensus 55 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIV-EGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33445 46777654 466777778888888899988766666666677788999999999998853
No 210
>PRK06382 threonine dehydratase; Provisional
Probab=37.23 E-value=3.6e+02 Score=27.22 Aligned_cols=56 Identities=11% Similarity=0.110 Sum_probs=42.6
Q ss_pred EEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHH
Q 008535 75 AMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 130 (562)
+.+..+-....+.++|...|..+..+-|...+......++.+++.++++.....+.
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 44555677777889999999887777666666667778999999999988754443
No 211
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=37.07 E-value=3e+02 Score=28.69 Aligned_cols=85 Identities=6% Similarity=-0.053 Sum_probs=60.9
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHH---HHHHhhhccceEEecCCCCCHHHHHHHHhhCCceE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYK---LHFAVPMAGAVLSALNTRLDSATLASILRQLEAKI 120 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~---~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 120 (562)
..+|...+...+.... ...++.++|++...+|....+-. ..++++..|+..+.. +...+..+...+++.++.+
T Consensus 201 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 276 (527)
T TIGR02275 201 IPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA-PDPSPTDCFPLIERHKVTV 276 (527)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC-CCCCHHHHHHHHHHhCCeE
Confidence 3478888776555433 34678899999888886543322 357778889887664 4567788888999999999
Q ss_pred EEEeccchHHHH
Q 008535 121 IFVDYQFVEVVQ 132 (562)
Q Consensus 121 ii~~~~~~~~~~ 132 (562)
+.........+.
T Consensus 277 ~~~~p~~~~~l~ 288 (527)
T TIGR02275 277 TALVPPAVALWM 288 (527)
T ss_pred EEecHHHHHHHH
Confidence 999877665443
No 212
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=36.98 E-value=3.3e+02 Score=24.90 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=56.8
Q ss_pred CceEEEECCeec--cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 35 DATSIIYGTVRF--SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 35 ~~~a~~~~~~~~--Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
.++.+-.++..- |+++-. +..+...+.+.|..+++.|+. ...+-....+.++|...|..+..+-|..........
T Consensus 15 ~~l~~K~e~~~ptgS~K~R~--a~~~l~~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~ 91 (244)
T cd00640 15 ANIYLKLEFLNPTGSFKDRG--ALNLILLAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQ 91 (244)
T ss_pred CEEEEEecccCCcCCcHHHH--HHHHHHHHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 455555554433 333221 222233334444324555544 444677777778888899887777776667777888
Q ss_pred HhhCCceEEEEeccchH
Q 008535 113 LRQLEAKIIFVDYQFVE 129 (562)
Q Consensus 113 l~~~~~~~ii~~~~~~~ 129 (562)
++..+++++.++....+
T Consensus 92 ~~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 92 MRALGAEVVLVPGDFDD 108 (244)
T ss_pred HHHCCCEEEEECCCHHH
Confidence 99999999999877443
No 213
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=36.77 E-value=1.8e+02 Score=28.87 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCC-----CCCHHHHHHHHhh---CCceEEEE
Q 008535 56 LKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNT-----RLDSATLASILRQ---LEAKIIFV 123 (562)
Q Consensus 56 ~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~ 123 (562)
..+...+...++++||.|++-.+... ...-++...|+.++.++. ..+.+.++..+++ -++++++.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~~---~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITFV---ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcchH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 34444455567899999877766543 334556778888776653 2467888888864 35667664
No 214
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=36.47 E-value=2.1e+02 Score=30.14 Aligned_cols=85 Identities=12% Similarity=-0.028 Sum_probs=64.0
Q ss_pred EeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|.+.+.......... .++.+++++....+-...+ +...+++...|+..+.++ ....+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888876666655543 4788899998887765433 445677788888888775 467889999999999999999
Q ss_pred chHHHHHHHh
Q 008535 292 QPRILNMIAN 301 (562)
Q Consensus 292 ~p~~~~~l~~ 301 (562)
.+.....+..
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 215
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=36.43 E-value=43 Score=23.80 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=14.8
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 008535 58 LASALAQLKISRGDIVAAM 76 (562)
Q Consensus 58 ~a~~L~~~gv~~gd~V~i~ 76 (562)
+-..|.++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456777899999999774
No 216
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=36.25 E-value=40 Score=23.96 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=17.2
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 008535 46 FSWRQTHQICLKLASALAQLKISRGDIVAA 75 (562)
Q Consensus 46 ~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i 75 (562)
+.|-+-.-+...+-..|.++|+++||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 333333444455667788889999999876
No 217
>PRK06839 acyl-CoA synthetase; Validated
Probab=35.93 E-value=3.8e+02 Score=27.47 Aligned_cols=86 Identities=12% Similarity=-0.071 Sum_probs=62.3
Q ss_pred ceEeechhHHHHHHHHHhh----cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEE
Q 008535 214 GVVYSHRGAYLNSLAQISR----CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTH 288 (562)
Q Consensus 214 ~v~~t~~~l~~~~~~~~~~----~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 288 (562)
+..+|+..+.......... .++.+++++...++-... .....+++...|...+.++. ..++.+...+++.+++.
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 3578888887666655544 467889998887776532 33456667777887777654 67888889999999999
Q ss_pred EEcchHHHHHHH
Q 008535 289 LCGQPRILNMIA 300 (562)
Q Consensus 289 l~~~p~~~~~l~ 300 (562)
++..+.....+.
T Consensus 104 i~~~~~~~~~~~ 115 (496)
T PRK06839 104 LFVEKTFQNMAL 115 (496)
T ss_pred EEEcHHHHHHHH
Confidence 998887765543
No 218
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=35.92 E-value=2.4e+02 Score=28.03 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=49.0
Q ss_pred HcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 64 QLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 64 ~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
+.| +++|...++....+-.-+.+.++|...|..+..+-|..........++.+++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 67785455557778888888889999998877777776777778999999999999974
No 219
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=35.79 E-value=3.3e+02 Score=29.54 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=59.6
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.|...+..... ..+++++|++...+|... -.....+++...|+..+.+. .+.++.+...+++.++.+++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 46888887766665554 458999999999998743 33445667778888877765 47888999999999999998
Q ss_pred cchH
Q 008535 291 GQPR 294 (562)
Q Consensus 291 ~~p~ 294 (562)
+...
T Consensus 192 ~~~~ 195 (652)
T TIGR01217 192 TVDG 195 (652)
T ss_pred Eccc
Confidence 7653
No 220
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=35.47 E-value=1.8e+02 Score=28.32 Aligned_cols=60 Identities=17% Similarity=0.202 Sum_probs=46.8
Q ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 62 LAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 62 L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
|+..+++||++|+|..--+.-.+...+|-.+- +.++.++.+. +-....++.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 45578999999999999999999999998644 7777775443 345556788899988865
No 221
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=35.47 E-value=18 Score=17.16 Aligned_cols=9 Identities=44% Similarity=0.855 Sum_probs=6.7
Q ss_pred cccCccccC
Q 008535 341 AYGMTEVLG 349 (562)
Q Consensus 341 ~YG~tE~~~ 349 (562)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 588888753
No 222
>PRK13388 acyl-CoA synthetase; Provisional
Probab=35.45 E-value=3.3e+02 Score=28.59 Aligned_cols=84 Identities=12% Similarity=-0.062 Sum_probs=60.4
Q ss_pred eEeechhHHHHHHHHHhhc---CC-CCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEE
Q 008535 215 VVYSHRGAYLNSLAQISRC---DV-RDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHL 289 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~~~---~~-~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 289 (562)
..+|...+..........+ ++ .+++++...++.... -....++++..|+..+.+++ ...+.+...+.+.+++.+
T Consensus 25 ~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~ 103 (540)
T PRK13388 25 RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLL 103 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEE
Confidence 3689988877666655543 66 688888888875433 33356677778888887754 677888999999999999
Q ss_pred EcchHHHHHH
Q 008535 290 CGQPRILNMI 299 (562)
Q Consensus 290 ~~~p~~~~~l 299 (562)
+........+
T Consensus 104 i~~~~~~~~~ 113 (540)
T PRK13388 104 VTDAEHRPLL 113 (540)
T ss_pred EEChhhhHHH
Confidence 9876655443
No 223
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=35.43 E-value=88 Score=24.03 Aligned_cols=52 Identities=6% Similarity=-0.167 Sum_probs=38.2
Q ss_pred eccHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 45 RFSWRQTHQI----CLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 45 ~~Ty~el~~~----~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
.+.+.++.+. ...+...+...++.+++.|+++|.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4566666443 235666777778888899999999988777777778888864
No 224
>PRK05850 acyl-CoA synthetase; Validated
Probab=35.34 E-value=3.9e+02 Score=28.27 Aligned_cols=83 Identities=6% Similarity=-0.067 Sum_probs=59.6
Q ss_pred eEeechhHHHHHHHHHhhc---CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc----CCHHHHHHHHHhcCeE
Q 008535 215 VVYSHRGAYLNSLAQISRC---DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT----VSAKIIFDSILIHKVT 287 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t 287 (562)
..+|...+...+......+ + .++|++...++.. ..-+...++++..|+..+.++. ...+.+...++..++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~-~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQG-LEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCc-ccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 4688888766555544433 4 5788988888854 3334456777788888887753 3567888999999999
Q ss_pred EEEcchHHHHHH
Q 008535 288 HLCGQPRILNMI 299 (562)
Q Consensus 288 ~l~~~p~~~~~l 299 (562)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988776655
No 225
>PLN02550 threonine dehydratase
Probab=35.26 E-value=5.8e+02 Score=27.23 Aligned_cols=97 Identities=10% Similarity=0.078 Sum_probs=60.3
Q ss_pred HcCCceEEEECCeec--cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHH
Q 008535 32 VYGDATSIIYGTVRF--SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATL 109 (562)
Q Consensus 32 ~~p~~~a~~~~~~~~--Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 109 (562)
..+..+.+-.++.+- ||+. .-..+++.+ |.+...++| . +.+..+-......++|.++|..+..+-|...+...
T Consensus 121 ~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-V--V~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~K 195 (591)
T PLN02550 121 RLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-V--ICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIK 195 (591)
T ss_pred hhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-E--EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHH
Confidence 334455555555443 4544 333333333 323234555 3 33566777778888899999887766666666666
Q ss_pred HHHHhhCCceEEEEeccchHHHHH
Q 008535 110 ASILRQLEAKIIFVDYQFVEVVQN 133 (562)
Q Consensus 110 ~~~l~~~~~~~ii~~~~~~~~~~~ 133 (562)
...++.+++.+++++....+....
T Consensus 196 v~~~r~~GAeVvl~g~~~dea~~~ 219 (591)
T PLN02550 196 WQSVERLGATVVLVGDSYDEAQAY 219 (591)
T ss_pred HHHHHHcCCEEEEeCCCHHHHHHH
Confidence 778899999999998765544333
No 226
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=35.09 E-value=4.2e+02 Score=27.43 Aligned_cols=83 Identities=16% Similarity=0.065 Sum_probs=59.7
Q ss_pred EeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|...+......... ..++..++++....+....+ ....++++..|...+.+. ...++.+...+++.+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4777777665555444 45788999999887764432 234566777787777665 468889999999999999998
Q ss_pred chHHHHHH
Q 008535 292 QPRILNMI 299 (562)
Q Consensus 292 ~p~~~~~l 299 (562)
.+.....+
T Consensus 116 ~~~~~~~~ 123 (517)
T PRK08008 116 SAQFYPMY 123 (517)
T ss_pred ecchhHHH
Confidence 88765444
No 227
>PRK07470 acyl-CoA synthetase; Validated
Probab=35.05 E-value=3.7e+02 Score=28.00 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=56.6
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec-CCCCCHHHHHHHHhhCCceEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL-NTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
.+|.+.+...+......+. .+..++|++...+|-...+-...+..+..|+..+.+ ....+.+.+...+++.++.++.+
T Consensus 182 ~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 260 (528)
T PRK07470 182 VLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFT 260 (528)
T ss_pred EEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEec
Confidence 4788877543332211111 267888999888887654433333344555555444 34678899999999999999999
Q ss_pred eccchHHHH
Q 008535 124 DYQFVEVVQ 132 (562)
Q Consensus 124 ~~~~~~~~~ 132 (562)
.......+.
T Consensus 261 ~P~~~~~l~ 269 (528)
T PRK07470 261 VPTILKMLV 269 (528)
T ss_pred hHHHHHHHH
Confidence 887776553
No 228
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=34.68 E-value=3e+02 Score=26.14 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=57.1
Q ss_pred CceEEEECCeec--cHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHH
Q 008535 35 DATSIIYGTVRF--SWRQTHQICLKLASALAQLK-ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLAS 111 (562)
Q Consensus 35 ~~~a~~~~~~~~--Ty~el~~~~~~~a~~L~~~g-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (562)
.++.+-.++.+- |+++ +.+........+.| +++|+.|+. ...+-.-..+.++|.+.|..+..+-|.........
T Consensus 23 ~~i~~K~E~~nptGS~K~--R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKD--RPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHH--HHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 356665555433 3332 22222233344445 477776644 66677778888888889988777766665666778
Q ss_pred HHhhCCceEEEEec
Q 008535 112 ILRQLEAKIIFVDY 125 (562)
Q Consensus 112 ~l~~~~~~~ii~~~ 125 (562)
.++.+++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 89999999999875
No 229
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.60 E-value=2.6e+02 Score=24.79 Aligned_cols=112 Identities=10% Similarity=0.048 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHhhcCCCCCCeeeeeccc--ccchhhHHHHHhHhhceEEEEe--ccCCHHHHHHHHHhcCeEEEEcchHH
Q 008535 220 RGAYLNSLAQISRCDVRDMPVFLWTLDM--FRCNGWCCTWAMAAVGGINVCI--RTVSAKIIFDSILIHKVTHLCGQPRI 295 (562)
Q Consensus 220 ~~l~~~~~~~~~~~~~~~~~~~l~~~pl--~~~~gl~~~~~~~~~g~~~v~~--~~~~~~~~~~~i~~~~~t~l~~~p~~ 295 (562)
+..+.........-......+++...+- .|..|....-..+-..|.-++. ....++.+.+.+.+.+++++..+-..
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred HHHHHhccccccccccceE----EEEEeCCCChHHHHHHH
Q 008535 296 LNMIANASASDQNQLQRKV----IIVIAGVLPTIEVLEQV 331 (562)
Q Consensus 296 ~~~l~~~~~~~~~~l~~l~----~i~~~g~~l~~~~~~~~ 331 (562)
-..+....+....--..-. .+++||..++.+..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCeEEEECCcCCHHHHHHc
No 230
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=34.39 E-value=3.1e+02 Score=29.56 Aligned_cols=96 Identities=10% Similarity=-0.005 Sum_probs=66.3
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.+|++.... . ......+|.+.+...+...... .+++++|++...++... -.+...++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIP-EAAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCC
Confidence 355666654221 1 1134578999887766655544 47889999998888643 23345667777888877765
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchH
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPR 294 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~ 294 (562)
...++.+...++..++.++++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 467889999999999999987654
No 231
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=34.39 E-value=3.3e+02 Score=31.86 Aligned_cols=86 Identities=13% Similarity=0.167 Sum_probs=63.6
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|.+.+...+..+.. ..+++++|++...+|-.. .+....++.+..|+..+..+...+.+.+.+.+++.++..+
T Consensus 800 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~ 876 (1146)
T PRK08633 800 VMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATIL 876 (1146)
T ss_pred EEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEE
Confidence 35788888776655433 356788999887777542 3344467778889888877766788999999999999999
Q ss_pred EEeccchHHHH
Q 008535 122 FVDYQFVEVVQ 132 (562)
Q Consensus 122 i~~~~~~~~~~ 132 (562)
.........+.
T Consensus 877 ~~~P~~~~~l~ 887 (1146)
T PRK08633 877 LGTPTFLRLYL 887 (1146)
T ss_pred EecHHHHHHHH
Confidence 98877665443
No 232
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=34.38 E-value=2.7e+02 Score=25.13 Aligned_cols=103 Identities=13% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCCCeeeeeccc-ccchhhHHHHHhHhhceEEEEe--ccCCHHHHHHHHHhcCeEEEEcc---hHHHHHHHhcccccccc
Q 008535 236 RDMPVFLWTLDM-FRCNGWCCTWAMAAVGGINVCI--RTVSAKIIFDSILIHKVTHLCGQ---PRILNMIANASASDQNQ 309 (562)
Q Consensus 236 ~~~~~~l~~~pl-~~~~gl~~~~~~~~~g~~~v~~--~~~~~~~~~~~i~~~~~t~l~~~---p~~~~~l~~~~~~~~~~ 309 (562)
..+..++.+.+- .|.-|....-..+-..|--++. ....++.+.+.+.+.+++++..+ +.....+.+..+.-...
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred ccceEEEEEeCCCChHHHHHHH---HhcCCeee
Q 008535 310 LQRKVIIVIAGVLPTIEVLEQV---ANFGFNIR 339 (562)
Q Consensus 310 l~~l~~i~~~g~~l~~~~~~~~---~~~~~~l~ 339 (562)
...++ +++||.+.+++..+.. +..|...+
T Consensus 167 ~~~~~-i~vGG~~~~~~~~~~~~~~~~~gad~y 198 (213)
T cd02069 167 GIKIP-LLIGGAATSRKHTAVKIAPEYDGPVVY 198 (213)
T ss_pred CCCCe-EEEEChhcCHHHHhhhhccccCCCceE
No 233
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=34.28 E-value=2.1e+02 Score=31.07 Aligned_cols=67 Identities=10% Similarity=0.090 Sum_probs=50.7
Q ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCC---CCCHHHHHHHHhhCCceEEEEeccchHHH
Q 008535 65 LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNT---RLDSATLASILRQLEAKIIFVDYQFVEVV 131 (562)
Q Consensus 65 ~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (562)
.+++++|++....+.+......+++.+..|++.+..+. ....+.+.+++++.++..+.+.......+
T Consensus 300 ~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 369 (655)
T PRK03584 300 CDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDAC 369 (655)
T ss_pred cCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHH
Confidence 57899999887776665444456788999999887753 24578899999999999988876655443
No 234
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=34.05 E-value=2.7e+02 Score=28.54 Aligned_cols=50 Identities=14% Similarity=0.363 Sum_probs=32.4
Q ss_pred HHcCCCCCCEEEEEcCCcHHHHHHHHH-hhhccceEEec--------------CCCCCHHHHHHHHhhCC
Q 008535 63 AQLKISRGDIVAAMAPNIPALYKLHFA-VPMAGAVLSAL--------------NTRLDSATLASILRQLE 117 (562)
Q Consensus 63 ~~~gv~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--------------~~~~~~~~l~~~l~~~~ 117 (562)
...++++||.| +. ..++...-| +...|++++-+ ..+.+.+.++..+....
T Consensus 110 ~~l~v~pGd~V----p~-n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 110 SRIAIKPGQYV----PG-NMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HHhCCCCcCEE----CC-ccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 34689999965 33 333333333 67788877733 34577899999987654
No 235
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=33.47 E-value=1.3e+02 Score=21.76 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHHcCC-------ceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 008535 19 PLTPIDFLERAAHVYGD-------ATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPN 79 (562)
Q Consensus 19 ~~ti~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~ 79 (562)
..|+.+++++....+|. ..++..+++.++ .+.-++.||.|+++-|-
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCCC
Confidence 56999999999988875 344555665555 23458899999998763
No 236
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=33.28 E-value=3.4e+02 Score=28.94 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=59.2
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA--LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKII 121 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 121 (562)
..+|...+...+..+... .+++++|++....|-... ++..+++.+..|+.++. .+..+...+...++..++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 358888888776665543 678899999988877543 34455666777776665 456788888889999999988
Q ss_pred EEeccchH
Q 008535 122 FVDYQFVE 129 (562)
Q Consensus 122 i~~~~~~~ 129 (562)
..-.....
T Consensus 293 ~~~p~l~~ 300 (600)
T PRK08279 293 QYIGELCR 300 (600)
T ss_pred eehHHHHH
Confidence 77655443
No 237
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=33.16 E-value=4.1e+02 Score=29.03 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=60.7
Q ss_pred CCCChHHHHHHHHHHc-CCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 18 VPLTPIDFLERAAHVY-GDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~-p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
+.-.|.+.=+.+|+.+ .++..+..++.+.. ++ + .+.. -+++||.|+ +-+|+--.+.. |+.++|+.
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~--------n~-a-v~~a-~~~~Gd~VL-vdRN~HKSv~h--aLilsga~ 258 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTA--------NK-I-VGMY-SAPAGSTVL-IDRNCHKSLTH--LMMMSDVT 258 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHH--------HH-H-HHHH-hcCCCCEEE-eecccHHHHHH--HHHHcCCe
Confidence 3334555556667766 45666766664432 11 1 1122 258899665 66777666544 99999999
Q ss_pred EEecCCCC---------C-----HHHHHHHHhhC-Cce----EEEEeccch
Q 008535 97 LSALNTRL---------D-----SATLASILRQL-EAK----IIFVDYQFV 128 (562)
Q Consensus 97 ~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~~~ 128 (562)
++.+.|.. + ++.++..++.. +++ +++++....
T Consensus 259 PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYd 309 (714)
T PRK15400 259 PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYD 309 (714)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCc
Confidence 99998754 4 67888887665 334 677766543
No 238
>PRK10595 SOS cell division inhibitor; Provisional
Probab=32.82 E-value=2.7e+02 Score=23.88 Aligned_cols=66 Identities=8% Similarity=-0.088 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce--EEecCC-CCCHHHHH---HHHhhCCceEEEE
Q 008535 58 LASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV--LSALNT-RLDSATLA---SILRQLEAKIIFV 123 (562)
Q Consensus 58 ~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~--~v~l~~-~~~~~~l~---~~l~~~~~~~ii~ 123 (562)
.+.+|.+.|+.....+.|...+..+.+-++-=|++.|.. ++..-| ..+.+.++ ...+..++-.++.
T Consensus 69 ~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 69 SREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred CHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 356778888887776666667777888888888888753 222223 55554433 3334444444443
No 239
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=32.70 E-value=1.5e+02 Score=20.02 Aligned_cols=46 Identities=22% Similarity=0.186 Sum_probs=30.1
Q ss_pred hHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHHHHHHHhc
Q 008535 467 SLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEELVTFCGD 520 (562)
Q Consensus 467 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~l~~~~~~ 520 (562)
...|++.|.++++|.++.+-.. . + .+.|...+.. .+.+++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~-~---~---~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLE-T---K---TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETT-T---T---EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECC-C---C---EEEEEEecCC-CCHHHHHHHHHH
Confidence 4679999999999988766321 1 1 2333334333 567888888865
No 240
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=32.42 E-value=2.7e+02 Score=28.54 Aligned_cols=87 Identities=14% Similarity=0.060 Sum_probs=57.4
Q ss_pred ceEEEECCeec--cHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 36 ATSIIYGTVRF--SWRQTHQICLKLASALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 36 ~~a~~~~~~~~--Ty~el~~~~~~~a~~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
++.+-.++.+- |++.= .+..+-....+.|. ++|+.| +.+..+-.-..+.++|.+.|..+..+-|...+++....
T Consensus 27 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDR--IALRMIEDAEASGRLKPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHHH--HHHHHHHHHHHcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 56665555333 33322 22233333444454 677765 44577788888888999999887777665555667788
Q ss_pred HhhCCceEEEEec
Q 008535 113 LRQLEAKIIFVDY 125 (562)
Q Consensus 113 l~~~~~~~ii~~~ 125 (562)
++.+++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 8999999999875
No 241
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=31.98 E-value=5.2e+02 Score=30.77 Aligned_cols=86 Identities=13% Similarity=0.075 Sum_probs=62.5
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHhhhccceEEecCC--CCCHHHHHHHHhhCCceE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPAL-YKLHFAVPMAGAVLSALNT--RLDSATLASILRQLEAKI 120 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~--~~~~~~l~~~l~~~~~~~ 120 (562)
..+|.+.+...+... ....+++++|+++...+-+.+. +.-++..+..|+..+..++ ..+++.+...+++.++.+
T Consensus 616 V~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~ 692 (1296)
T PRK10252 616 VMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTT 692 (1296)
T ss_pred EEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeE
Confidence 357887776544332 2346889999999988887544 3346777888999887765 356788999999999999
Q ss_pred EEEeccchHHHH
Q 008535 121 IFVDYQFVEVVQ 132 (562)
Q Consensus 121 ii~~~~~~~~~~ 132 (562)
+.........+.
T Consensus 693 ~~~~Ps~l~~l~ 704 (1296)
T PRK10252 693 THFVPSMLAAFV 704 (1296)
T ss_pred EEeCHHHHHHHH
Confidence 988776655443
No 242
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=31.66 E-value=3.8e+02 Score=29.02 Aligned_cols=78 Identities=10% Similarity=0.005 Sum_probs=60.3
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.|...+..... ..+++++|++...+|..-. .+...+++...|+..+.+. .+.++.+...+++.++.+++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 56899988766665554 4589999999999997442 3345667777888877664 57899999999999999998
Q ss_pred cch
Q 008535 291 GQP 293 (562)
Q Consensus 291 ~~p 293 (562)
+..
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 243
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=31.58 E-value=3.9e+02 Score=28.73 Aligned_cols=94 Identities=15% Similarity=0.018 Sum_probs=64.9
Q ss_pred CCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-c
Q 008535 196 ECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-T 271 (562)
Q Consensus 196 ~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~ 271 (562)
++.+|++.. +..+|. .-.+|.+.|...+..... ..+++++|++...+|..- -.+...++++..|+..+.+. .
T Consensus 66 p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 66 GEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecCCC
Confidence 445555443 222222 246888887666655444 458999999999998743 33445677778888877664 5
Q ss_pred CCHHHHHHHHHhcCeEEEEcch
Q 008535 272 VSAKIIFDSILIHKVTHLCGQP 293 (562)
Q Consensus 272 ~~~~~~~~~i~~~~~t~l~~~p 293 (562)
+.++.+...++..++.++++..
T Consensus 142 ~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 142 FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCHHHHHHHHHhcCceEEEECC
Confidence 7888999999999999998764
No 244
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=31.56 E-value=89 Score=22.78 Aligned_cols=40 Identities=20% Similarity=0.027 Sum_probs=34.1
Q ss_pred HHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 59 ASALAQ-LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 59 a~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..+|.+ .|+++|+.++.+.....|.+..+=|.+++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 346766 7999999999999999999999999999886633
No 245
>PLN02356 phosphateglycerate kinase
Probab=31.56 E-value=3.1e+02 Score=27.79 Aligned_cols=64 Identities=16% Similarity=0.070 Sum_probs=46.9
Q ss_pred HHHHHcCC-CCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEe
Q 008535 60 SALAQLKI-SRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 60 ~~L~~~gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
..+.+.|. ++|..| +....+-.-+...++|...|..+..+-|...+.+....++.+++.++.++
T Consensus 93 ~~a~~~g~~~~~g~V-veaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 93 EEALESGQLFPGGVV-TEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHHHhCCccCCCCEE-EEeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 34444454 366654 45566667888888999999887777666666666789999999999985
No 246
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=31.50 E-value=2.1e+02 Score=28.33 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=48.6
Q ss_pred EEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHH
Q 008535 75 AMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQ 132 (562)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 132 (562)
+.+.-+-+...+.||+.++|..+..+=|..++....+.++..++.+++..+...+.-.
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~deAk~ 175 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDEAKA 175 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHHHHH
Confidence 4455567788899999999999888889999999999999999999999877655433
No 247
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=31.46 E-value=2.2e+02 Score=29.02 Aligned_cols=56 Identities=20% Similarity=0.314 Sum_probs=36.4
Q ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC-----CCHHHHHHHHhhCCceEEEEe
Q 008535 65 LKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR-----LDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 65 ~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 124 (562)
.++++||.|++-.+..... ..++...|+.+++++.. .+.+.+...+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~~t~~a~---~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGFPTT---VNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999887766554433 44555678887766532 456777777754 56666664
No 248
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.95 E-value=1.5e+02 Score=31.11 Aligned_cols=86 Identities=20% Similarity=0.223 Sum_probs=59.7
Q ss_pred eccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHH-HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALA-QLKISRGDIVAAMAPNIPA-LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~-~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|...+...+ .+..+. ..++.++|++....|-.-. ....+++++..|+.++...+....+.+...+++.++..+.
T Consensus 195 ~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~ 272 (539)
T PRK07008 195 LYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSA 272 (539)
T ss_pred EEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEE
Confidence 46766654322 222332 3678899999887775432 2334477788999988777778899999999999999988
Q ss_pred EeccchHHHH
Q 008535 123 VDYQFVEVVQ 132 (562)
Q Consensus 123 ~~~~~~~~~~ 132 (562)
........+.
T Consensus 273 ~~P~~~~~l~ 282 (539)
T PRK07008 273 GVPTVWLGLL 282 (539)
T ss_pred echHHHHHHH
Confidence 8876655443
No 249
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.65 E-value=4e+02 Score=28.09 Aligned_cols=82 Identities=12% Similarity=-0.041 Sum_probs=60.1
Q ss_pred eEeechhHHHHHHHHHhh----cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEE
Q 008535 215 VVYSHRGAYLNSLAQISR----CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHL 289 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~~----~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 289 (562)
..+|.+.+.......... .++..++++...++... ......++++..|+..+.+++ ...+.+...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~-~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVL-QYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 358998887776665543 36789999998888643 233456677788888887754 677889999999999999
Q ss_pred EcchHHHH
Q 008535 290 CGQPRILN 297 (562)
Q Consensus 290 ~~~p~~~~ 297 (562)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87665544
No 250
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=30.44 E-value=3.5e+02 Score=28.27 Aligned_cols=86 Identities=6% Similarity=-0.038 Sum_probs=62.3
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH---HHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALY---KLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKI 120 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 120 (562)
..+|.+.+...+.... ...+++++|++...+|-...+- ...++++..|+..+.. +..+.......+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSV---EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHH---HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 3578888877666543 3457889999988887654332 2467888899888765 4456777888999999999
Q ss_pred EEEeccchHHHHH
Q 008535 121 IFVDYQFVEVVQN 133 (562)
Q Consensus 121 ii~~~~~~~~~~~ 133 (562)
+.........+..
T Consensus 276 ~~~~p~~~~~l~~ 288 (536)
T PRK10946 276 TALVPPAVSLWLQ 288 (536)
T ss_pred EEeChHHHHHHHh
Confidence 9988776655543
No 251
>PRK07787 acyl-CoA synthetase; Validated
Probab=29.89 E-value=3.1e+02 Score=28.10 Aligned_cols=83 Identities=14% Similarity=0.033 Sum_probs=60.4
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|++.+...+..++. ..++.++|++....|-. ..++..+++++..|+.++... ..+++.+...++ .++..+.
T Consensus 147 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~ 221 (471)
T PRK07787 147 VLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYF 221 (471)
T ss_pred EEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEE
Confidence 4788888776555543 35678899887766643 345667888999999988765 467889999999 8998888
Q ss_pred EeccchHHHH
Q 008535 123 VDYQFVEVVQ 132 (562)
Q Consensus 123 ~~~~~~~~~~ 132 (562)
+.......+.
T Consensus 222 ~~P~~~~~l~ 231 (471)
T PRK07787 222 GVPTVWSRIA 231 (471)
T ss_pred cchHHHHHHH
Confidence 8776554443
No 252
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=29.12 E-value=3.9e+02 Score=25.84 Aligned_cols=74 Identities=12% Similarity=0.198 Sum_probs=55.9
Q ss_pred HHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHhh
Q 008535 61 ALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALDI 137 (562)
Q Consensus 61 ~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~ 137 (562)
-|.+.|++||.+|+|..--+.-.+...+|.++ |..+.-++... ..-+..++..+++..+...+.........+.
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 36778999999999999999999999999987 55555565443 3445678889999988877555555555543
No 253
>PLN02574 4-coumarate--CoA ligase-like
Probab=29.04 E-value=5.1e+02 Score=27.27 Aligned_cols=83 Identities=17% Similarity=0.019 Sum_probs=59.7
Q ss_pred EeechhHHHHHHHHHh---h-cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 216 VYSHRGAYLNSLAQIS---R-CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~---~-~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
.+|.+.+...+..... . .+++++|++....+-.. ..+...++++..|+..+.+++ ..+..+...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 4677776555544443 3 57889999998887543 334456777788888887764 5778888899999999998
Q ss_pred cchHHHHHH
Q 008535 291 GQPRILNMI 299 (562)
Q Consensus 291 ~~p~~~~~l 299 (562)
..+.....+
T Consensus 145 ~~~~~~~~~ 153 (560)
T PLN02574 145 TSPENVEKL 153 (560)
T ss_pred ECHHHHHHH
Confidence 887766555
No 254
>PRK05857 acyl-CoA synthetase; Validated
Probab=28.89 E-value=3.4e+02 Score=28.49 Aligned_cols=80 Identities=15% Similarity=-0.014 Sum_probs=58.7
Q ss_pred eEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.+...+...... .++.+++++...++... ..+...++++..|+..+.++. ..++.+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 458898887666655544 47889999988887543 334456777788888887754 6778888889989998888
Q ss_pred cchHH
Q 008535 291 GQPRI 295 (562)
Q Consensus 291 ~~p~~ 295 (562)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 77654
No 255
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=28.76 E-value=2.5e+02 Score=29.43 Aligned_cols=79 Identities=13% Similarity=0.059 Sum_probs=60.6
Q ss_pred ccHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCC--cHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 46 FSWRQTHQICLKLAS-ALAQLKISRGDIVAAMAPN--IPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 46 ~Ty~el~~~~~~~a~-~L~~~gv~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
+|+...+ +.+. .....|+++.|+|-+.+|- +...++-+-+|+..|+++| |...+|+.....-...+++.++-
T Consensus 262 ith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 262 ITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 6655444 4555 3445799999999999885 6788999999999998876 67899999999999999988765
Q ss_pred EeccchH
Q 008535 123 VDYQFVE 129 (562)
Q Consensus 123 ~~~~~~~ 129 (562)
.-.+...
T Consensus 337 YIGElcR 343 (649)
T KOG1179|consen 337 YIGELCR 343 (649)
T ss_pred hHHHHHH
Confidence 5444333
No 256
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=28.73 E-value=5e+02 Score=28.45 Aligned_cols=101 Identities=11% Similarity=-0.035 Sum_probs=71.1
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.+...+..... ..++.++|++...++.... .+...++++..|+..+.+. ...++.+...+.+.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45788887766665554 4578899999888875432 2334566777888877665 57888999999999999999
Q ss_pred cchHHHHHHHhccccccccccceEEEEEeC
Q 008535 291 GQPRILNMIANASASDQNQLQRKVIIVIAG 320 (562)
Q Consensus 291 ~~p~~~~~l~~~~~~~~~~l~~l~~i~~~g 320 (562)
.....+..+.... ..++.++.++.-+
T Consensus 184 ~~~~~~~~l~~~~----~~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDIS----SQLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHh----hccCCceEEEEEC
Confidence 9888877775533 2234455555443
No 257
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=28.68 E-value=1.1e+02 Score=29.65 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=42.2
Q ss_pred eccHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 45 RFSWRQTHQI------CLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 45 ~~Ty~el~~~------~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
.+.|.++.+. ...+...+.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3667776542 466777888899999999999999999888888888889964
No 258
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=28.67 E-value=3.4e+02 Score=28.45 Aligned_cols=84 Identities=8% Similarity=-0.042 Sum_probs=59.7
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|.+.+...+..... ..++.+++++...++-...+ +...++++..|+..+.++. .....+...++..++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 46888887766655554 34788899998887764432 3456777778887776654 5678888999999999998
Q ss_pred cchHHHHHH
Q 008535 291 GQPRILNMI 299 (562)
Q Consensus 291 ~~p~~~~~l 299 (562)
..+..+..+
T Consensus 133 ~~~~~~~~~ 141 (546)
T PLN02330 133 TNDTNYGKV 141 (546)
T ss_pred EccchhhhH
Confidence 776655443
No 259
>PRK08813 threonine dehydratase; Provisional
Probab=28.57 E-value=5e+02 Score=25.53 Aligned_cols=58 Identities=9% Similarity=-0.063 Sum_probs=43.4
Q ss_pred EEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHH
Q 008535 74 AAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVV 131 (562)
Q Consensus 74 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (562)
.+....+-.-..+.++|...|..+..+-|...+......++.+++.++.+.....+..
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a~ 141 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEAY 141 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 4566777888888899999998766655555555667777999999999977654443
No 260
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=28.43 E-value=2.6e+02 Score=28.13 Aligned_cols=61 Identities=8% Similarity=0.025 Sum_probs=47.9
Q ss_pred EEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHH
Q 008535 73 VAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQN 133 (562)
Q Consensus 73 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 133 (562)
-.+....+-.-+.+.++|...|..+..+-|...+......++.+++.++.++....+....
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~~ 196 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVEE 196 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHHH
Confidence 4566677788888899999999887777777777777888999999999998765544333
No 261
>PRK08246 threonine dehydratase; Provisional
Probab=28.41 E-value=4.8e+02 Score=25.07 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH
Q 008535 69 RGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE 129 (562)
Q Consensus 69 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 129 (562)
+++.| +....+-.-..+.++|.++|..+..+-|...++.....++.+++++++++....+
T Consensus 67 ~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 126 (310)
T PRK08246 67 PAAGV-VAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYAD 126 (310)
T ss_pred cCCeE-EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHH
Confidence 45554 4445577788888888899987766666656666778999999999999875443
No 262
>PRK05939 hypothetical protein; Provisional
Probab=28.20 E-value=2.5e+02 Score=28.18 Aligned_cols=56 Identities=16% Similarity=0.288 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEe
Q 008535 67 ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 67 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
+++||.|++.-+.-......+-++-+.|+.+..++.. ..++++..++. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 4667766554332112222222334556666665542 45556655543 45555553
No 263
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=28.05 E-value=2.3e+02 Score=27.43 Aligned_cols=90 Identities=12% Similarity=-0.020 Sum_probs=54.2
Q ss_pred CceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHH
Q 008535 35 DATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASI 112 (562)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (562)
.++.+-.++.+ =|+++-. +..+...+.+.| ++.|+.. ..+-.-..+.++|...|..+..+-|..........
T Consensus 38 ~~i~~K~E~~nptGS~K~R~--a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKDRG--MTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHHhh--HHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 45666655432 3444222 233333334444 4455444 45556666668888899876666555555666788
Q ss_pred HhhCCceEEEEeccchHH
Q 008535 113 LRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 113 l~~~~~~~ii~~~~~~~~ 130 (562)
++..++++++++....+.
T Consensus 112 l~~~GA~Vi~~~~~~~~~ 129 (324)
T cd01563 112 ALAYGATVLAVEGNFDDA 129 (324)
T ss_pred HHHcCCEEEEECCcHHHH
Confidence 899999999998754443
No 264
>PRK07514 malonyl-CoA synthase; Validated
Probab=28.04 E-value=3.5e+02 Score=27.92 Aligned_cols=85 Identities=9% Similarity=-0.013 Sum_probs=61.2
Q ss_pred ceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEE
Q 008535 214 GVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHL 289 (562)
Q Consensus 214 ~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 289 (562)
+..+|...+...+..... ..++.+++++...++-.. -.....+++...|+..+.++ ...+..+...++..+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 346888877665554443 457889999988887642 33345667777888877765 4677888999999999999
Q ss_pred EcchHHHHHH
Q 008535 290 CGQPRILNMI 299 (562)
Q Consensus 290 ~~~p~~~~~l 299 (562)
+..+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887766544
No 265
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=28.02 E-value=2.8e+02 Score=27.68 Aligned_cols=56 Identities=13% Similarity=0.228 Sum_probs=24.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEe
Q 008535 67 ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 67 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
+++||.|++..+.-......+-.+...|+.+...++ ..+++...++..+.++|+++
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~--d~~~l~~~i~~~~tklV~ie 144 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP--STEDIIEAIKEGRTKLVFIE 144 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC--CHHHHHHhcCccCceEEEEE
Confidence 455665555444333222222122334544444333 24455555544345555543
No 266
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=27.99 E-value=2.8e+02 Score=26.43 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=56.1
Q ss_pred cCCceEEEECCe--eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHH
Q 008535 33 YGDATSIIYGTV--RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLA 110 (562)
Q Consensus 33 ~p~~~a~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 110 (562)
.+.++.+-.++. +-|+++... ...-..+.+.| +++.|+. ...+-.-..+.++|...|..++.+-|...+....
T Consensus 30 ~g~~i~~K~E~~nptgS~Kdr~a--~~~l~~~~~~~--~~~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~ 104 (304)
T cd01562 30 LGAEVYLKCENLQKTGSFKIRGA--YNKLLSLSEEE--RAKGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKV 104 (304)
T ss_pred hCCeEEEEeccCCCcCCcHHHhH--HHHHHhcCHhh--cCCcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 344666666554 344443322 11111222223 2334433 4567777788888889998876666665566677
Q ss_pred HHHhhCCceEEEEeccchHH
Q 008535 111 SILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 111 ~~l~~~~~~~ii~~~~~~~~ 130 (562)
..++..++++++++....+.
T Consensus 105 ~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 105 DATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred HHHHHcCCEEEEeCCCHHHH
Confidence 88999999999998764433
No 267
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=27.91 E-value=96 Score=27.36 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=26.8
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAA 75 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i 75 (562)
-+||.++.+.+.++|..+.+.|.+|.-.|++
T Consensus 6 ~vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 6 YVSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred EecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 3799999999999999999999998755544
No 268
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=27.91 E-value=2.6e+02 Score=28.48 Aligned_cols=65 Identities=8% Similarity=-0.018 Sum_probs=49.9
Q ss_pred EEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHh
Q 008535 72 IVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALD 136 (562)
Q Consensus 72 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 136 (562)
+-.+....+-.-+...++|..+|..+..+-|...+......++.+++.++++.....+....+.+
T Consensus 153 ~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~A~~ 217 (431)
T TIGR02035 153 YSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEEGRK 217 (431)
T ss_pred ceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHH
Confidence 34566677788888888899999887777777777778889999999999998876555444433
No 269
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=27.79 E-value=5.5e+02 Score=30.12 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=60.8
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|.+.+...+..... ..+++++|++...+|-.- .+...++..+..|+..+..+.....+.+.+.+++.++..+.
T Consensus 812 ~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 888 (1140)
T PRK06814 812 VLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILF 888 (1140)
T ss_pred EecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEE
Confidence 4788888766655543 357789999988888643 33355677788898888776555666778889999999998
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
........+
T Consensus 889 ~~p~~l~~l 897 (1140)
T PRK06814 889 GTDTFLNGY 897 (1140)
T ss_pred ecHHHHHHH
Confidence 877655443
No 270
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.42 E-value=2.8e+02 Score=29.35 Aligned_cols=83 Identities=10% Similarity=-0.069 Sum_probs=60.8
Q ss_pred EeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|.+.+...+..... ..+++.+|++...++.... .+...++++..|+..+.+. ...++.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4788887666655544 3478899999988886443 2345666777787777765 478889999999999999998
Q ss_pred chHHHHHH
Q 008535 292 QPRILNMI 299 (562)
Q Consensus 292 ~p~~~~~l 299 (562)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 271
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=27.41 E-value=5.3e+02 Score=26.49 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=61.6
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHhhhccceEEecCCC--CCHHHHHHHHhhCCceE
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP-ALYKLHFAVPMAGAVLSALNTR--LDSATLASILRQLEAKI 120 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 120 (562)
..+|+..+...+..+... .++..+|++....|... ..+..+++++..|+..+..++. .....+.+.+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 357888887665544333 57888898887776653 3345677889999999888754 45678888899999998
Q ss_pred EEEeccchHHH
Q 008535 121 IFVDYQFVEVV 131 (562)
Q Consensus 121 ii~~~~~~~~~ 131 (562)
+.......+.+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88887665543
No 272
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.41 E-value=3.6e+02 Score=27.77 Aligned_cols=83 Identities=14% Similarity=-0.024 Sum_probs=59.8
Q ss_pred EeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|...+......... ..++++++++....+-.. ..+...++++..|+..+.++. .....+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 4777776555554443 457889999988887643 334456777778888877754 67788889999999999988
Q ss_pred chHHHHHH
Q 008535 292 QPRILNMI 299 (562)
Q Consensus 292 ~p~~~~~l 299 (562)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87766554
No 273
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=27.26 E-value=4.8e+02 Score=27.97 Aligned_cols=95 Identities=14% Similarity=0.057 Sum_probs=64.4
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.+|++. .+..+|. .-.+|.+.|...+..... ..+++++|++...+|... -.....++++..|+..+.+.
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCC
Confidence 345565543 3322222 346788887666554443 458899999999988643 23345677777888777665
Q ss_pred cCCHHHHHHHHHhcCeEEEEcch
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQP 293 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p 293 (562)
.+.++.+...++..++.++++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 47788899999999999998754
No 274
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=27.09 E-value=4.8e+02 Score=25.91 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=60.0
Q ss_pred HcCCceEEEECCe--eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHH
Q 008535 32 VYGDATSIIYGTV--RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATL 109 (562)
Q Consensus 32 ~~p~~~a~~~~~~--~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 109 (562)
..+.++.+-.++. +=||++ ......+.. +.+.|..+ -.+.+..+-......++|.+.|..+..+-|...+...
T Consensus 12 ~~g~~i~~K~E~~~ptgS~K~-R~a~~~i~~-~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k 86 (380)
T TIGR01127 12 ITGSEVYLKLENLQKTGSFKI-RGALNKIAN-LSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSK 86 (380)
T ss_pred HhCCeEEEEecCCCCCCCcHH-HHHHHHHHh-cchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHH
Confidence 3445666666554 335544 222222222 33333322 2455566777788888999999887777676677777
Q ss_pred HHHHhhCCceEEEEeccchHHHH
Q 008535 110 ASILRQLEAKIIFVDYQFVEVVQ 132 (562)
Q Consensus 110 ~~~l~~~~~~~ii~~~~~~~~~~ 132 (562)
...++.+++++++++....+...
T Consensus 87 ~~~~~~~GA~V~~~~~~~~~a~~ 109 (380)
T TIGR01127 87 VKATKSYGAEVILHGDDYDEAYA 109 (380)
T ss_pred HHHHHHCCCEEEEECCCHHHHHH
Confidence 88899999999999765444433
No 275
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=26.28 E-value=3.7e+02 Score=27.43 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=34.9
Q ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHH-hhhccceEEec--C------------CCCCHHHHHHHHhhCC
Q 008535 62 LAQLKISRGDIVAAMAPNIPALYKLHFA-VPMAGAVLSAL--N------------TRLDSATLASILRQLE 117 (562)
Q Consensus 62 L~~~gv~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--~------------~~~~~~~l~~~l~~~~ 117 (562)
|...++++||.| + +..++....| +...|++++-+ + .+.+.+.++..++...
T Consensus 102 l~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 102 LSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred HHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 445789999976 3 3555555555 67888877766 2 2357889999887643
No 276
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=26.24 E-value=6.1e+02 Score=26.46 Aligned_cols=83 Identities=12% Similarity=0.125 Sum_probs=59.6
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|.+.+...+.... ...+++.+|++....|-.. .++...+..+..|...+.. +..+++.+...+++.++.++.
T Consensus 214 ~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~vt~~~ 289 (538)
T TIGR03208 214 MHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ-DIWNPARAAELIRETGVTFTM 289 (538)
T ss_pred EeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-CccCHHHHHHHHHHhCCeEEe
Confidence 478877766554443 3356788999998888754 3455567777888776644 567889999999999999988
Q ss_pred EeccchHHH
Q 008535 123 VDYQFVEVV 131 (562)
Q Consensus 123 ~~~~~~~~~ 131 (562)
+.......+
T Consensus 290 ~~p~~~~~l 298 (538)
T TIGR03208 290 ASTPFLTDL 298 (538)
T ss_pred cCHHHHHHH
Confidence 776655443
No 277
>PRK09088 acyl-CoA synthetase; Validated
Probab=26.20 E-value=5.2e+02 Score=26.48 Aligned_cols=78 Identities=15% Similarity=-0.053 Sum_probs=56.3
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|...+......... ..++..++++...++-... .+...++++..|+..+.++ ...++.+...+++.+++.++
T Consensus 21 ~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii 99 (488)
T PRK09088 21 RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLL 99 (488)
T ss_pred cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEE
Confidence 35888888666655444 4468889998888776443 3344567777888877775 46788889999999999998
Q ss_pred cch
Q 008535 291 GQP 293 (562)
Q Consensus 291 ~~p 293 (562)
+..
T Consensus 100 ~~~ 102 (488)
T PRK09088 100 GDD 102 (488)
T ss_pred Ecc
Confidence 755
No 278
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=26.03 E-value=2.3e+02 Score=26.81 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=50.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEe-cCCCCCHHHHHHHHhhCCceEEEEeccchHH
Q 008535 66 KISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSA-LNTRLDSATLASILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 66 gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 130 (562)
.+.+||.|+=-..|+.---+.+-=|-..|..-+- +--....++++..|..++++.+|++.++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 5788999999999987665555555666755444 4455678999999999999999999886643
No 279
>PRK12483 threonine dehydratase; Reviewed
Probab=25.84 E-value=7e+02 Score=26.17 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=46.7
Q ss_pred EEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHh
Q 008535 74 AAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALD 136 (562)
Q Consensus 74 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 136 (562)
.+.+..+-......++|..+|..+..+-|...+......++.+++.++++.....+....+.+
T Consensus 88 VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A~~ 150 (521)
T PRK12483 88 VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHALK 150 (521)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
Confidence 355566778888888999999887776666666666788999999999998765555444433
No 280
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=25.78 E-value=4.1e+02 Score=27.92 Aligned_cols=97 Identities=11% Similarity=-0.050 Sum_probs=66.8
Q ss_pred CceEEEeccCCCCCCCceEeechhHHHHHHHHHhhc----CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEe-ccC
Q 008535 198 DPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISRC----DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCI-RTV 272 (562)
Q Consensus 198 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~-~~~ 272 (562)
+...++|-+-.++. -.+|.+.|..........+ +. .+|++...+|..... ....+++.-.|+....+ +.+
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGL 99 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCC
Confidence 44566665555444 6788888766665554443 45 999999999975432 23455566666655544 568
Q ss_pred CHHHHHHHHHhcCeEEEEcchHHHHHH
Q 008535 273 SAKIIFDSILIHKVTHLCGQPRILNMI 299 (562)
Q Consensus 273 ~~~~~~~~i~~~~~t~l~~~p~~~~~l 299 (562)
.++.+...+...++.++++....++..
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 999999999999999998776666544
No 281
>PRK06721 threonine synthase; Reviewed
Probab=25.64 E-value=3.1e+02 Score=27.00 Aligned_cols=89 Identities=10% Similarity=-0.061 Sum_probs=52.8
Q ss_pred CceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCC-CHHHHHH
Q 008535 35 DATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRL-DSATLAS 111 (562)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~ 111 (562)
.++.+-.++.+ =|+++--... .+. ...+.|. ++| +....+-.-..+.++|...|..+..+-|.. .+.....
T Consensus 43 ~~i~~K~E~~nptGS~KdR~a~~-~i~-~a~~~g~---~~v-V~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~ 116 (352)
T PRK06721 43 IQLYGKYEGANPTGSFKDRGMVM-AVA-KAKEEGS---EAI-ICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLA 116 (352)
T ss_pred CeEEEEecCCCCccchHHHHHHH-HHH-HHHHCCC---CEE-EEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHH
Confidence 45666665533 3444433221 122 2334442 233 444566677778888889998766665543 3455566
Q ss_pred HHhhCCceEEEEeccchH
Q 008535 112 ILRQLEAKIIFVDYQFVE 129 (562)
Q Consensus 112 ~l~~~~~~~ii~~~~~~~ 129 (562)
.++.+++++++++.....
T Consensus 117 ~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 117 QAVAYGAEIISIEGNFDD 134 (352)
T ss_pred HHHHcCCEEEEECCCHHH
Confidence 788999999999865443
No 282
>PRK13383 acyl-CoA synthetase; Provisional
Probab=25.54 E-value=3.7e+02 Score=27.91 Aligned_cols=84 Identities=15% Similarity=0.054 Sum_probs=60.6
Q ss_pred EeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|...+...+...... .++.+++++...++..- ..+...+++...|+..+.++. ..++.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 47777776655555443 47888999888887533 333456677778888887754 67888999999999999998
Q ss_pred chHHHHHHH
Q 008535 292 QPRILNMIA 300 (562)
Q Consensus 292 ~p~~~~~l~ 300 (562)
.+.....+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887665543
No 283
>PLN02479 acetate-CoA ligase
Probab=25.50 E-value=6.6e+02 Score=26.49 Aligned_cols=81 Identities=10% Similarity=0.081 Sum_probs=59.6
Q ss_pred EeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|...+.......... .++.++|++....+... ..+...++++..|+..+.++ ......+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 57888876666655544 47899999988888533 33345667777888777775 467788999999999999998
Q ss_pred chHHHH
Q 008535 292 QPRILN 297 (562)
Q Consensus 292 ~p~~~~ 297 (562)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776654
No 284
>PRK14057 epimerase; Provisional
Probab=25.48 E-value=5e+02 Score=24.18 Aligned_cols=67 Identities=12% Similarity=-0.039 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccc----------eEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 56 LKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGA----------VLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 56 ~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~----------~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
.++...+.++| .|.|.++.+.+.+..-.+-.+-..|+ .=+.++|..+.+.+..++.....-.+.+-+
T Consensus 88 ~~~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV~ 164 (254)
T PRK14057 88 WTAAQACVKAG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVN 164 (254)
T ss_pred HHHHHHHHHhC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEEC
Confidence 33444445554 57899999976554444444555564 567789999999999999988877777643
No 285
>PRK07798 acyl-CoA synthetase; Validated
Probab=25.22 E-value=6.4e+02 Score=26.05 Aligned_cols=85 Identities=4% Similarity=-0.242 Sum_probs=58.6
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
-.+|...+......... ..++..++++...++-.. --+...++++..|+..+.++. ...+.+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 46888887665554444 347888998888776432 223445666777877777654 5778888899999999998
Q ss_pred cchHHHHHHH
Q 008535 291 GQPRILNMIA 300 (562)
Q Consensus 291 ~~p~~~~~l~ 300 (562)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8776555543
No 286
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=25.07 E-value=1e+02 Score=17.10 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=13.8
Q ss_pred cCCCcEEEeccccceee
Q 008535 443 NPDGYVQMKDRRKDIII 459 (562)
Q Consensus 443 ~~~g~l~~~GR~~d~i~ 459 (562)
+++|.+|+..+..+.|.
T Consensus 10 ~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 10 DSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp ETTSEEEEEECCCTEEE
T ss_pred eCCCCEEEEECCCCEEE
Confidence 47899999998877765
No 287
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=25.06 E-value=7e+02 Score=24.89 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=63.5
Q ss_pred ChHHHHHHHHHHcCCceEEEE-C-C-------eeccHHHHHHHHHHHHHHHHHcCCC--CCCEEEEEcCCcH--HHHHHH
Q 008535 21 TPIDFLERAAHVYGDATSIIY-G-T-------VRFSWRQTHQICLKLASALAQLKIS--RGDIVAAMAPNIP--ALYKLH 87 (562)
Q Consensus 21 ti~~~l~~~a~~~p~~~a~~~-~-~-------~~~Ty~el~~~~~~~a~~L~~~gv~--~gd~V~i~~~~~~--~~~~~~ 87 (562)
++.++++=..+.+-+..+++. . + ..+|++.+...+..+++.+ ++. +.|++...+|-.. -+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~ 157 (386)
T TIGR02372 81 RIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSC 157 (386)
T ss_pred cHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHH
Confidence 666666655555433344333 2 1 4589999998888777655 443 3457877777663 334455
Q ss_pred HHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHH
Q 008535 88 FAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVV 131 (562)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (562)
+..+..|+..+... ..++..+...++.. .+++........+
T Consensus 158 l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 158 LLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHH
Confidence 66777898887765 45555555555432 4666666555444
No 288
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=25.02 E-value=3.9e+02 Score=26.61 Aligned_cols=12 Identities=25% Similarity=0.387 Sum_probs=6.9
Q ss_pred eeeccccCcccc
Q 008535 337 NIRHAYGMTEVL 348 (562)
Q Consensus 337 ~l~~~YG~tE~~ 348 (562)
.+-..+|..|+.
T Consensus 321 ~~~~s~G~~~sl 332 (382)
T TIGR02080 321 TLAESLGGVESL 332 (382)
T ss_pred eEeccCCCCcce
Confidence 345566666653
No 289
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=25.01 E-value=6.7e+02 Score=27.52 Aligned_cols=96 Identities=10% Similarity=0.054 Sum_probs=58.6
Q ss_pred CCCChHHHHHHHHHHc-CCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 18 VPLTPIDFLERAAHVY-GDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 18 ~~~ti~~~l~~~a~~~-p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
+.-.|.+.=+.+|+.+ .++..+..++.+.. + .+ .+.. -+++||.|+ +-+|+--.+.. |+.++|+.
T Consensus 193 ~~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~--------n-~a-v~~a-~~~~Gd~VL-vdRN~HKSv~~--aLilsga~ 258 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAEQSYIVTNGTSTS--------N-KI-VGMY-AAPAGSTLL-IDRNCHKSLAH--LLMMSDVV 258 (713)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCChHHH--------H-HH-HHHH-hcCCCCEEE-eecccHHHHHH--HHHHcCCe
Confidence 3334455556666665 55666666664432 1 11 1111 258899665 66777666554 99999999
Q ss_pred EEecCCCC---------CH-----HHHHHHHhhCC-c----eEEEEeccc
Q 008535 97 LSALNTRL---------DS-----ATLASILRQLE-A----KIIFVDYQF 127 (562)
Q Consensus 97 ~v~l~~~~---------~~-----~~l~~~l~~~~-~----~~ii~~~~~ 127 (562)
++.+.|.. +. +.++..+++.. + .++++....
T Consensus 259 PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY 308 (713)
T PRK15399 259 PIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308 (713)
T ss_pred eEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC
Confidence 99998764 33 77888886652 2 355665543
No 290
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=24.96 E-value=25 Score=24.18 Aligned_cols=6 Identities=83% Similarity=2.007 Sum_probs=5.6
Q ss_pred eeeeCc
Q 008535 433 WYHTGD 438 (562)
Q Consensus 433 ~~~TGD 438 (562)
||.|||
T Consensus 74 wydtgd 79 (80)
T PF05452_consen 74 WYDTGD 79 (80)
T ss_pred cccCCC
Confidence 999998
No 291
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=24.91 E-value=5.4e+02 Score=23.52 Aligned_cols=90 Identities=11% Similarity=-0.042 Sum_probs=44.2
Q ss_pred CceeEEcCCCcEEEeccccceeecCCe---EechHHHHHHHhcCCCceeEEEEeeeCCCCCceeEEEEEeCCCCCCCHHH
Q 008535 437 GDLAVRNPDGYVQMKDRRKDIIISGAE---IISSLEVEAVLLSNPKVLEAAVVGKVDDQLKEVPVAFVKLKEGREASPEE 513 (562)
Q Consensus 437 GD~~~~~~~g~l~~~GR~~d~i~~~G~---~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 513 (562)
|.+.|.++||.+.|.|.. +...+. ++.-...+..+..++ .+.++++.++ +. ..+++-.++.... .++
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~---~k-~~I~vFtDp~Cpy-Ckk 124 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQ---EK-HVITVFTDITCGY-CHK 124 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCC---CC-EEEEEEECCCChH-HHH
Confidence 457888899999888864 444442 333333334444555 3455555432 22 3344444444432 334
Q ss_pred HHHHHhccCCCCCCCcEEEeecccCC
Q 008535 514 LVTFCGDELPSCMVPRAIFFEDIPVN 539 (562)
Q Consensus 514 l~~~~~~~l~~~~~p~~i~~~~lP~t 539 (562)
+.+.+.+... .--.+++..+|+.
T Consensus 125 l~~~l~~~~~---~~v~v~~~~~P~~ 147 (232)
T PRK10877 125 LHEQMKDYNA---LGITVRYLAFPRQ 147 (232)
T ss_pred HHHHHHHHhc---CCeEEEEEeccCC
Confidence 4444443221 1123444567875
No 292
>PRK08526 threonine dehydratase; Provisional
Probab=24.60 E-value=6.4e+02 Score=25.39 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=59.2
Q ss_pred HcCCceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHH
Q 008535 32 VYGDATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATL 109 (562)
Q Consensus 32 ~~p~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 109 (562)
....++.+-.++.+ -||++= -...++.....+.+ ++| | +.+..+-......++|.++|..+..+-|...+...
T Consensus 32 ~~g~~iylK~E~lqptGSfK~R-gA~n~i~~l~~~~~-~~g--V-V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k 106 (403)
T PRK08526 32 ISGAEVYLKKENLQITGAYKIR-GAYNKIANLSEEQK-QHG--V-IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLK 106 (403)
T ss_pred HhCCeEEEEecCCCCCCCCHHH-HHHHHHHhccHhhc-CCE--E-EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHH
Confidence 33446667666643 344332 22222322222222 222 3 44666777888888999999887666666555555
Q ss_pred HHHHhhCCceEEEEeccchHHHHHHH
Q 008535 110 ASILRQLEAKIIFVDYQFVEVVQNAL 135 (562)
Q Consensus 110 ~~~l~~~~~~~ii~~~~~~~~~~~~~ 135 (562)
...++.+++.++++.....+....+.
T Consensus 107 ~~~~r~~GA~Vv~~g~~~~~a~~~a~ 132 (403)
T PRK08526 107 VSGTKALGAEVILKGDNYDEAYAFAL 132 (403)
T ss_pred HHHHHhCCCEEEEECCCHHHHHHHHH
Confidence 56789999999999876555444433
No 293
>PRK08638 threonine dehydratase; Validated
Probab=24.28 E-value=4.8e+02 Score=25.44 Aligned_cols=58 Identities=5% Similarity=0.032 Sum_probs=43.7
Q ss_pred EEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHH
Q 008535 74 AAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVV 131 (562)
Q Consensus 74 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (562)
++....+-.-..+.++|...|..+..+-|..........++.+++++++++....+..
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~ 135 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTI 135 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHH
Confidence 3445557778888888999998877766666666777889999999999976554443
No 294
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=24.27 E-value=3.3e+02 Score=25.84 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=36.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCC----------CCCHHHHHHHHhh-CCceEEEEe
Q 008535 67 ISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNT----------RLDSATLASILRQ-LEAKIIFVD 124 (562)
Q Consensus 67 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 124 (562)
+++||.|++.-+.... .+.++...|+.++.+++ ..+.+.++..+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789988877554433 23455667888777654 3567888888875 467766654
No 295
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=24.11 E-value=4.6e+02 Score=22.47 Aligned_cols=105 Identities=17% Similarity=0.083 Sum_probs=63.3
Q ss_pred HHHHHHHcCCceEEEECCeeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-HHHHHHHHHhhhcc--ceEEecCC
Q 008535 26 LERAAHVYGDATSIIYGTVRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNI-PALYKLHFAVPMAG--AVLSALNT 102 (562)
Q Consensus 26 l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~-~~~~~~~lA~~~~G--~~~v~l~~ 102 (562)
|-++++..+....+.|.++.+|=+-. ..++++|++|...|+.+ |+|++.-.-. .+..-.+..++-.. .++--+.|
T Consensus 6 LmRHgkA~~~~~~~~D~dR~Lt~~G~-~ea~~~a~~L~~~~~~~-D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~~~l~p 83 (163)
T COG2062 6 LMRHGKAEWAAPGIADFDRPLTERGR-KEAELVAAWLAGQGVEP-DLVLVSPAVRARQTAEIVAEHLGEKKVEVFEELLP 83 (163)
T ss_pred EeecccccccCCCCCCccCcCCHHHH-HHHHHHHHHHHhcCCCC-CEEEeChhHHHHHHHHHHHHhhCcccceeccccCC
Confidence 34567777777777788888887665 46788999999999844 4444333222 34444444444433 33444556
Q ss_pred CCCHHHHHHHHhhCCc---eEEEE-eccchHHHH
Q 008535 103 RLDSATLASILRQLEA---KIIFV-DYQFVEVVQ 132 (562)
Q Consensus 103 ~~~~~~l~~~l~~~~~---~~ii~-~~~~~~~~~ 132 (562)
.-.+..+...++...- .++++ +....+.+.
T Consensus 84 ~~d~~~~l~~l~~~~d~v~~vllVgH~P~l~~l~ 117 (163)
T COG2062 84 NGDPGTVLDYLEALGDGVGSVLLVGHNPLLEELA 117 (163)
T ss_pred CCCHHHHHHHHHHhcccCceEEEECCCccHHHHH
Confidence 6777777777666553 34444 334444433
No 296
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.04 E-value=4.3e+02 Score=25.03 Aligned_cols=90 Identities=9% Similarity=0.104 Sum_probs=52.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHH---HHHHHHhhCCceEEEE
Q 008535 47 SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSA---TLASILRQLEAKIIFV 123 (562)
Q Consensus 47 Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii~ 123 (562)
.++++.++...+-.++.+.--....+..+...+...++.-.+++-..+..-+--....++. ++...+++.+.++||+
T Consensus 155 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 234 (286)
T cd01019 155 NLEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFA 234 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 4555566666555555542111235567777778888877776644432211112334455 4556667899999999
Q ss_pred eccchHHHHHHHh
Q 008535 124 DYQFVEVVQNALD 136 (562)
Q Consensus 124 ~~~~~~~~~~~~~ 136 (562)
+..........+.
T Consensus 235 e~~~~~~~~~~ia 247 (286)
T cd01019 235 EPQFHPKIAETLA 247 (286)
T ss_pred cCCCChHHHHHHH
Confidence 8876655554443
No 297
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=24.02 E-value=7.2e+02 Score=25.98 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=55.6
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPA--LYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|...+...+.. .....+++++|++....|-... ++..+++.+..|+..+... ..+.+.+...+++.++..++
T Consensus 206 ~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (547)
T PRK06087 206 MLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCML 281 (547)
T ss_pred EEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEe
Confidence 4688877655443 3344678999999887776543 4556777788898888765 46788888899999998887
Q ss_pred Eec
Q 008535 123 VDY 125 (562)
Q Consensus 123 ~~~ 125 (562)
.-.
T Consensus 282 ~~~ 284 (547)
T PRK06087 282 GAT 284 (547)
T ss_pred ccH
Confidence 643
No 298
>PRK13391 acyl-CoA synthetase; Provisional
Probab=24.02 E-value=6.5e+02 Score=25.98 Aligned_cols=97 Identities=11% Similarity=0.010 Sum_probs=66.0
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR- 270 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~- 270 (562)
.++.++.+...++ -.+|...+...+...... .++.+++++....+-... .+...++++..|...+.++
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecccc
Confidence 3455665554332 248888876666555543 468889998888775432 3344667777787777765
Q ss_pred cCCHHHHHHHHHhcCeEEEEcchHHHHHH
Q 008535 271 TVSAKIIFDSILIHKVTHLCGQPRILNMI 299 (562)
Q Consensus 271 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 299 (562)
......+...++..++..++..+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 46788899999999999998887665443
No 299
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.86 E-value=3.6e+02 Score=21.21 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=31.6
Q ss_pred hhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 90 VPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
+-..|.-++.+.+..+.+++...+.+.+|+++..+..
T Consensus 23 l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 23 LRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3347888899999999999999999999999887643
No 300
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=23.83 E-value=4e+02 Score=28.03 Aligned_cols=84 Identities=6% Similarity=-0.118 Sum_probs=60.5
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc-CCHHHHHHHHHhcCeEEEE
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT-VSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 290 (562)
..+|...+...+..... ..++.+++++...++-.. ..+...++++..|+..+.+++ ..+..+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVL-QYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 46899888666655444 347889999988877543 233445777788888887754 5788899999999999998
Q ss_pred cchHHHHHH
Q 008535 291 GQPRILNMI 299 (562)
Q Consensus 291 ~~p~~~~~l 299 (562)
....+...+
T Consensus 126 ~~~~~~~~~ 134 (557)
T PRK07059 126 VLENFATTV 134 (557)
T ss_pred EchhhHHHH
Confidence 876654433
No 301
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=23.53 E-value=2.2e+02 Score=24.85 Aligned_cols=46 Identities=4% Similarity=-0.031 Sum_probs=31.3
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHh
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAV 90 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~ 90 (562)
.-+||.|+.+.+.++|..+.+. ++....+.+...++-..++..+|-
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 3489999999999999999884 222223555555565555555554
No 302
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=22.94 E-value=4.4e+02 Score=27.66 Aligned_cols=83 Identities=7% Similarity=-0.074 Sum_probs=60.7
Q ss_pred EeechhHHHHHHHHHh----hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEE
Q 008535 216 VYSHRGAYLNSLAQIS----RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLC 290 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 290 (562)
.+|+..+......... ..+++.++++...++.... -+...++++..|+..+.++ ...+..+...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 5788887666655554 3578899999888876432 3345677778888888765 46778889999999999999
Q ss_pred cchHHHHHH
Q 008535 291 GQPRILNMI 299 (562)
Q Consensus 291 ~~p~~~~~l 299 (562)
........+
T Consensus 129 ~~~~~~~~~ 137 (560)
T PRK08751 129 VIDNFGTTV 137 (560)
T ss_pred EcchhHHHH
Confidence 877665443
No 303
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=22.93 E-value=2.1e+02 Score=22.70 Aligned_cols=41 Identities=20% Similarity=0.133 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC-cHHHHHHHHHhhhccce
Q 008535 56 LKLASALAQLKISRGDIVAAMAPN-IPALYKLHFAVPMAGAV 96 (562)
Q Consensus 56 ~~~a~~L~~~gv~~gd~V~i~~~~-~~~~~~~~lA~~~~G~~ 96 (562)
+.+.+.+.+.|+.+.+.|+++|.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 456666777889999999999988 46666666777777854
No 304
>PRK07409 threonine synthase; Validated
Probab=22.83 E-value=3.5e+02 Score=26.61 Aligned_cols=90 Identities=13% Similarity=-0.011 Sum_probs=52.2
Q ss_pred CCceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCC-CHHHHH
Q 008535 34 GDATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRL-DSATLA 110 (562)
Q Consensus 34 p~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~ 110 (562)
..++.+-.++.+ -|+++--. ..+...+.+.|. + ..+....+-.-..+.++|...|..+..+-|.. ......
T Consensus 45 g~~i~~K~E~~nptGSfKdR~a--~~~l~~a~~~g~---~-~iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~ 118 (353)
T PRK07409 45 GVEVYVKYEGLNPTGSFKDRGM--TMAVTKAKEEGA---K-AVICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKL 118 (353)
T ss_pred CCeEEEEecCCCCccchHHHHH--HHHHHHHHHCCC---C-EEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhH
Confidence 345666655533 34444322 222223334442 2 33445666667888888999998865444443 344455
Q ss_pred HHHhhCCceEEEEeccchH
Q 008535 111 SILRQLEAKIIFVDYQFVE 129 (562)
Q Consensus 111 ~~l~~~~~~~ii~~~~~~~ 129 (562)
..++.+++.+++++....+
T Consensus 119 ~~~~~~GA~Vi~~~~~~~~ 137 (353)
T PRK07409 119 AQAVMYGAEIIQIDGNFDD 137 (353)
T ss_pred HHHHhcCCEEEEECCCHHH
Confidence 5678899999999875444
No 305
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=22.63 E-value=4.4e+02 Score=21.71 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=36.2
Q ss_pred HHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEec
Q 008535 84 YKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDY 125 (562)
Q Consensus 84 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 125 (562)
.+....+-..|.-++.+-...+.+++...+.+.+|+++..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 444455557899999999999999999999999999999875
No 306
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=22.29 E-value=5.1e+02 Score=24.53 Aligned_cols=56 Identities=21% Similarity=0.127 Sum_probs=44.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 70 GDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 70 gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
++.| +....+-.-..+.++|...|..+..+-|....+.....++..++.++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4556 6677777888888888888988777777767778888899999999988654
No 307
>PRK02991 D-serine dehydratase; Provisional
Probab=22.04 E-value=3.8e+02 Score=27.41 Aligned_cols=61 Identities=8% Similarity=-0.022 Sum_probs=45.9
Q ss_pred EEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHH
Q 008535 73 VAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQN 133 (562)
Q Consensus 73 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 133 (562)
..+....+-.-..+.++|...|..+..+-|...+......++.+++.+++++....+....
T Consensus 159 ~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a~~~ 219 (441)
T PRK02991 159 SIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVAVEE 219 (441)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 4556677788888888999999887666666666666777999999999998765544433
No 308
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=22.02 E-value=3.2e+02 Score=20.10 Aligned_cols=51 Identities=6% Similarity=0.012 Sum_probs=32.8
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCC
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTR 103 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 103 (562)
..+++.++.+.+. .+.+++.|+++|.++.....+...+...|..+..++..
T Consensus 34 ~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l~GG 84 (90)
T cd01524 34 INIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNLDGG 84 (90)
T ss_pred EeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEecCC
Confidence 3577777654322 24667789999998766666666667778644444433
No 309
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=22.01 E-value=4.8e+02 Score=31.44 Aligned_cols=97 Identities=10% Similarity=-0.116 Sum_probs=64.0
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEecc
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRT 271 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~ 271 (562)
.++.+|++...+...+......+|.+.+...+...... .++++++++...++-... .+...++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEeccCC
Confidence 45666666433221111124568999887766665544 478899999888886432 34456777888888887765
Q ss_pred -CCHHHHHHHHHhcCeEEEEcc
Q 008535 272 -VSAKIIFDSILIHKVTHLCGQ 292 (562)
Q Consensus 272 -~~~~~~~~~i~~~~~t~l~~~ 292 (562)
..++.+...++..++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 456677778888888877754
No 310
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.01 E-value=7.2e+02 Score=25.96 Aligned_cols=81 Identities=10% Similarity=0.046 Sum_probs=54.8
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEcCCc--HHHHHHHHHhhhccceEEecCCCC---CHHHHHHHHhhCC
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRG-DIVAAMAPNI--PALYKLHFAVPMAGAVLSALNTRL---DSATLASILRQLE 117 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~g-d~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~ 117 (562)
..+|.+.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+.+.. .+.....++++.+
T Consensus 170 v~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~ 246 (545)
T PRK07768 170 VQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYR 246 (545)
T ss_pred EEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhC
Confidence 35899888765554433 3567776 8888777764 345555667788898887775532 4566778899999
Q ss_pred ceEEEEeccc
Q 008535 118 AKIIFVDYQF 127 (562)
Q Consensus 118 ~~~ii~~~~~ 127 (562)
+.++.+....
T Consensus 247 ~~~~~~~~~~ 256 (545)
T PRK07768 247 GTMTAAPNFA 256 (545)
T ss_pred CEEEECchHH
Confidence 9987654433
No 311
>PRK05638 threonine synthase; Validated
Probab=21.96 E-value=3.3e+02 Score=27.83 Aligned_cols=91 Identities=16% Similarity=0.020 Sum_probs=53.3
Q ss_pred ceEEEECC--eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHH
Q 008535 36 ATSIIYGT--VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASIL 113 (562)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 113 (562)
++.+-.++ .+-||++=... ..+...+ +.| .+.|+. ...+-.-..+.+.|.++|..+..+-|...+..-...+
T Consensus 81 ~l~~K~E~~nPtGSfKdR~a~-~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRLAT-VAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHHHHH-HHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 45555544 34566663222 2222222 333 334444 5566666677777778887765555544455567788
Q ss_pred hhCCceEEEEeccchHHHH
Q 008535 114 RQLEAKIIFVDYQFVEVVQ 132 (562)
Q Consensus 114 ~~~~~~~ii~~~~~~~~~~ 132 (562)
+.++++++.++....+...
T Consensus 155 ~~~GA~vi~v~~~~~~~~~ 173 (442)
T PRK05638 155 IAFGAKIIRYGESVDEAIE 173 (442)
T ss_pred HhcCcEEEEECCCHHHHHH
Confidence 9999999999866544443
No 312
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=21.91 E-value=3.3e+02 Score=21.13 Aligned_cols=50 Identities=8% Similarity=0.023 Sum_probs=35.1
Q ss_pred eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEec
Q 008535 44 VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSAL 100 (562)
Q Consensus 44 ~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (562)
..+.+.++.+ .+.+.+..+.+.|.++|.++.....+...+...|..-+-.
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 3567766543 4555566667789999999888777777888888765543
No 313
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.67 E-value=8.1e+02 Score=24.40 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=66.1
Q ss_pred HHHHHHHcC-CceEEEECCee---ccHHHHHHHHHHHHHHHHHc----------------CCC--CCCEEEEEcCCcHHH
Q 008535 26 LERAAHVYG-DATSIIYGTVR---FSWRQTHQICLKLASALAQL----------------KIS--RGDIVAAMAPNIPAL 83 (562)
Q Consensus 26 l~~~a~~~p-~~~a~~~~~~~---~Ty~el~~~~~~~a~~L~~~----------------gv~--~gd~V~i~~~~~~~~ 83 (562)
+.+.++... .++.+-+++.+ -||+..-.... +++.+.+. .++ .|..-.+....+-.-
T Consensus 28 ~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~aSsGN~g 106 (376)
T TIGR01747 28 LDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYA-IAQYLAEKLHLDIETLSFEHLKNDAIGEKMGQATFATATDGNHG 106 (376)
T ss_pred hHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHH-HHHHHHHHhCCCcccCCHHHHhhhHHHhhcCCCEEEEECccHHH
Confidence 344455555 46777777653 37776654433 55544421 111 123455666777788
Q ss_pred HHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHH
Q 008535 84 YKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEV 130 (562)
Q Consensus 84 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 130 (562)
..+.++|...|..+..+-|...+......++.+++++++++....+.
T Consensus 107 ~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~a 153 (376)
T TIGR01747 107 RGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDDT 153 (376)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 88888889999886665555555666777889999999998754443
No 314
>PRK08162 acyl-CoA synthetase; Validated
Probab=21.57 E-value=4.5e+02 Score=27.50 Aligned_cols=83 Identities=8% Similarity=-0.029 Sum_probs=61.5
Q ss_pred EeechhHHHHHHHHHhh---cCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEc
Q 008535 216 VYSHRGAYLNSLAQISR---CDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCG 291 (562)
Q Consensus 216 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 291 (562)
.+|.+.+.......... .++..++++....+-.. --+...++++..|+..+.++ ......+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIP-AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch-HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58888887666655554 47889999988887643 22344666777787777665 467888999999999999998
Q ss_pred chHHHHHH
Q 008535 292 QPRILNMI 299 (562)
Q Consensus 292 ~p~~~~~l 299 (562)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88766554
No 315
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=21.54 E-value=2.5e+02 Score=20.62 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccce
Q 008535 57 KLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAV 96 (562)
Q Consensus 57 ~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (562)
.+...+...++.+++.|+++|.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 4455566678888999999998887777777777777765
No 316
>PLN02409 serine--glyoxylate aminotransaminase
Probab=21.38 E-value=6.9e+02 Score=25.02 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHH-HHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEe
Q 008535 51 THQICLKLASALAQ-LKISRGDIVAAMAPNIPALYK-LHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVD 124 (562)
Q Consensus 51 l~~~~~~~a~~L~~-~gv~~gd~V~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (562)
+.+..+++...|.+ .|.+..+.|.+.. ++...+. ++..++.-|-.++..++.........+++..+.++....
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~-~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPT-TGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeC-CcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 33333444444433 2444334333333 3333333 333444555544444444444444455555566555553
No 317
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.36 E-value=6.4e+02 Score=26.34 Aligned_cols=85 Identities=13% Similarity=0.014 Sum_probs=57.9
Q ss_pred eccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCcH-HHHHHHHHhhhccceEEecC-CCCCHHHHHHHHhhCCceEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKI-SRGDIVAAMAPNIP-ALYKLHFAVPMAGAVLSALN-TRLDSATLASILRQLEAKII 121 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv-~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~i 121 (562)
.+|+..+...+..+. ...++ ..+|++....|... -.+..+++.+..|+..+..+ ...+++.+...++..++..+
T Consensus 193 ~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~ 269 (542)
T PRK07786 193 VLTHANLTGQAMTCL---RTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGI 269 (542)
T ss_pred hhhHHHHHHHHHHHH---HhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEE
Confidence 468888766554433 33455 45666666555432 22456788888998887654 24678899999999999999
Q ss_pred EEeccchHHHH
Q 008535 122 FVDYQFVEVVQ 132 (562)
Q Consensus 122 i~~~~~~~~~~ 132 (562)
+........+.
T Consensus 270 ~~~P~~l~~l~ 280 (542)
T PRK07786 270 FLVPAQWQAVC 280 (542)
T ss_pred EehHHHHHHHH
Confidence 99887665554
No 318
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=21.33 E-value=6.6e+02 Score=24.03 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH----------------------------HHHHHHHHhhhccceEE
Q 008535 47 SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP----------------------------ALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 47 Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~----------------------------~~~~~~lA~~~~G~~~v 98 (562)
.+.+..+....+...+.+.|+. ..|+|.+-++- ...+-.+||++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4555556667777888888764 35666554432 34566788999999999
Q ss_pred ecCCCCCH--HHHHHHHhhCCceEEEEecc
Q 008535 99 ALNTRLDS--ATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 99 ~l~~~~~~--~~l~~~l~~~~~~~ii~~~~ 126 (562)
--.|+... ..+..+.++.+.- +..++
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp--i~GdD 232 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP--IAGDD 232 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE--EEESS
T ss_pred eccCccccCCHHHHHHHHHcCCC--eecch
Confidence 88887665 7788888886654 44444
No 319
>COG4594 FecB ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=21.30 E-value=4.7e+02 Score=24.25 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=47.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhcc-ceEEecCCCCCHHHHHHHHhhCCceEEEEeccchHHHHHHHh
Q 008535 58 LASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAG-AVLSALNTRLDSATLASILRQLEAKIIFVDYQFVEVVQNALD 136 (562)
Q Consensus 58 ~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G-~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 136 (562)
++..|.+.|+.| |+|.-.|...-+.--.- -.+| ..-|---+..+-+ .+...+|++||+|.+.+..+...++
T Consensus 59 FaDaLaal~v~P---VGIADDnk~krI~k~Vr-~ki~~ytSVGTRsQPslE----~Is~LKPDLIIAD~sRHk~vy~eLk 130 (310)
T COG4594 59 FADALAALGVTP---VGIADDNKKKRILKDVR-DKIDPYTSVGTRSQPSLE----AISALKPDLIIADSSRHKKVYKELK 130 (310)
T ss_pred HHHHHHHcCCee---eeeccCchhhhhhHHHH-hhcCCcccccCCCCCCHH----HHhccCCCeEEecchhhHHHHHHHH
Confidence 455678889886 99999988766652222 2233 3333333333333 4678899999999998887776665
Q ss_pred hc
Q 008535 137 IL 138 (562)
Q Consensus 137 ~~ 138 (562)
..
T Consensus 131 KI 132 (310)
T COG4594 131 KI 132 (310)
T ss_pred hh
Confidence 54
No 320
>PRK12582 acyl-CoA synthetase; Provisional
Probab=21.27 E-value=3.5e+02 Score=29.06 Aligned_cols=78 Identities=10% Similarity=-0.145 Sum_probs=55.3
Q ss_pred eEeechhHHHHHHHHHh---hcCCCCCCeeeeecccccchhhHHHHHhHhhceEEEEeccC-C-----HHHHHHHHHhcC
Q 008535 215 VVYSHRGAYLNSLAQIS---RCDVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCIRTV-S-----AKIIFDSILIHK 285 (562)
Q Consensus 215 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~~~~-~-----~~~~~~~i~~~~ 285 (562)
-.+|.+.+...+..... ..+++++|++...++.. .-.+...++++..|+..+.+.+. . .+.+...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46888887766665554 34788999999888843 33344566777788887776542 2 378888888889
Q ss_pred eEEEEcch
Q 008535 286 VTHLCGQP 293 (562)
Q Consensus 286 ~t~l~~~p 293 (562)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887654
No 321
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.13 E-value=7.4e+02 Score=23.90 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=73.0
Q ss_pred CChHHHHHHHHHHcCCceEEEECC---------eeccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC-cHHHHHHHHH
Q 008535 20 LTPIDFLERAAHVYGDATSIIYGT---------VRFSWRQTHQICLKLASALAQLKISRGDIVAAMAPN-IPALYKLHFA 89 (562)
Q Consensus 20 ~ti~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~-~~~~~~~~lA 89 (562)
-|+..++++.-+..+..+.-+.+- .-+.=+|+......+++.|+.. ++..-=|.++.+- ..|.+-+.+-
T Consensus 140 TTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraA-LReDPDVIlvGEmRD~ETi~~ALt 218 (353)
T COG2805 140 TTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAA-LREDPDVILVGEMRDLETIRLALT 218 (353)
T ss_pred HHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHH-hhcCCCEEEEeccccHHHHHHHHH
Confidence 378888888888888877544321 2368889999999999999884 3333336666665 5889999888
Q ss_pred hhhcc-ceEEecCCCCCHHHHHHHHhhCCc
Q 008535 90 VPMAG-AVLSALNTRLDSATLASILRQLEA 118 (562)
Q Consensus 90 ~~~~G-~~~v~l~~~~~~~~l~~~l~~~~~ 118 (562)
+...| .++..++.+...+.+.+++....+
T Consensus 219 AAETGHLV~~TLHT~sA~~ti~RiidvFp~ 248 (353)
T COG2805 219 AAETGHLVFGTLHTNSAAKTIDRIIDVFPA 248 (353)
T ss_pred HHhcCCEEEEecccccHHHHHHHHHHhCCh
Confidence 88888 567788888888888888876554
No 322
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=20.87 E-value=1e+03 Score=25.34 Aligned_cols=101 Identities=10% Similarity=-0.100 Sum_probs=65.0
Q ss_pred CCCceEEEec--cCCCCCCCceEeechhHHHHHHHHHhhc--CCCCCCeeeeecccccchhhHHHHHhHhhceEEEEe-c
Q 008535 196 ECDPISVNYT--SGSTGDPKGVVYSHRGAYLNSLAQISRC--DVRDMPVFLWTLDMFRCNGWCCTWAMAAVGGINVCI-R 270 (562)
Q Consensus 196 ~~~~a~i~~T--SGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~gl~~~~~~~~~g~~~v~~-~ 270 (562)
++.++++... .+++|. ...+|...+...+......+ .+.++|++...++... ..+...++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~-e~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGI-DYVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCh-hHHHHHHHHHHcCceeEecCC
Confidence 4566655432 112232 34678888766665544433 2688999998888753 2334566777778777765 2
Q ss_pred c-C--CHHHHHHHHHhcCeEEEEcchHHHHHH
Q 008535 271 T-V--SAKIIFDSILIHKVTHLCGQPRILNMI 299 (562)
Q Consensus 271 ~-~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 299 (562)
. . .++.+...++..++..++..+..+..+
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 2 2 267888999999999999887665543
No 323
>PRK07503 methionine gamma-lyase; Provisional
Probab=20.84 E-value=4.5e+02 Score=26.42 Aligned_cols=31 Identities=13% Similarity=0.377 Sum_probs=15.1
Q ss_pred hhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 91 PMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
-..|+.+..++.. ..+++...+.. ++++|+.
T Consensus 126 ~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~l 156 (403)
T PRK07503 126 GEFGVTVRHVDLT-DPAALKAAISD-KTRMVYF 156 (403)
T ss_pred hhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEE
Confidence 3455555555432 34455555433 4555554
No 324
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=20.70 E-value=7.4e+02 Score=27.47 Aligned_cols=116 Identities=14% Similarity=0.121 Sum_probs=75.3
Q ss_pred CCCCceEEEeccCCCCCCCceEeechhHHHHHHHHHhh------cCCCCC-----------CeeeeecccccchhhHHHH
Q 008535 195 HECDPISVNYTSGSTGDPKGVVYSHRGAYLNSLAQISR------CDVRDM-----------PVFLWTLDMFRCNGWCCTW 257 (562)
Q Consensus 195 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~------~~~~~~-----------~~~l~~~pl~~~~gl~~~~ 257 (562)
.++.+|++.... |.+ ...+|.+.+...+...... .++.++ |++....+... --+...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHH
Confidence 345666653322 211 2467888776665554433 367776 78877777532 2334567
Q ss_pred HhHhhceEEEEec-cCCHHHHHHHHHhcCeEEEEcchHHHHHHHhccccccccccceEEEEEe
Q 008535 258 AMAAVGGINVCIR-TVSAKIIFDSILIHKVTHLCGQPRILNMIANASASDQNQLQRKVIIVIA 319 (562)
Q Consensus 258 ~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~ 319 (562)
++...|+..+.+. ...++.+...+.+-++.+++..+..+..+.... ..++.++.++.-
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~ 207 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIIL 207 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEE
Confidence 7777888887764 578899999999999999999888877776543 224556665543
No 325
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=20.57 E-value=2.8e+02 Score=26.84 Aligned_cols=61 Identities=18% Similarity=0.090 Sum_probs=53.1
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEecc
Q 008535 66 KISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQ 126 (562)
Q Consensus 66 gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 126 (562)
-+.||..+++=.-.+---+...+.|..-|..++.+=|..-..+-...|+.+++.++.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 4799988888888888888999999999999888878777778889999999999999764
No 326
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=20.55 E-value=6.6e+02 Score=24.23 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=41.7
Q ss_pred EEcCCcHHHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEEeccchH
Q 008535 75 AMAPNIPALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFVDYQFVE 129 (562)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 129 (562)
+....+-.-..+.++|.+.|..+..+-|...+......++.+++.+++++....+
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (317)
T TIGR02991 71 VAASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDD 125 (317)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 3555677778888899999988766666555566778889999999999875433
No 327
>PRK06060 acyl-CoA synthetase; Validated
Probab=20.48 E-value=6.1e+02 Score=27.72 Aligned_cols=86 Identities=9% Similarity=0.027 Sum_probs=59.7
Q ss_pred eccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEE
Q 008535 45 RFSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIP--ALYKLHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIF 122 (562)
Q Consensus 45 ~~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (562)
.+|.+.+...+..+.. ...++.++|++....+-.. .+...++..+..|+..+..+.....+.+...++..++.++.
T Consensus 164 ~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~ 241 (705)
T PRK06060 164 IHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLY 241 (705)
T ss_pred EEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEe
Confidence 4787777665544322 2356788898877766443 22344567788898888776667788888899999999998
Q ss_pred EeccchHHHH
Q 008535 123 VDYQFVEVVQ 132 (562)
Q Consensus 123 ~~~~~~~~~~ 132 (562)
........+.
T Consensus 242 ~~P~~l~~l~ 251 (705)
T PRK06060 242 GVPNFFARVI 251 (705)
T ss_pred eHHHHHHHHH
Confidence 8777665544
No 328
>PRK06234 methionine gamma-lyase; Provisional
Probab=20.44 E-value=5.2e+02 Score=25.91 Aligned_cols=55 Identities=16% Similarity=0.338 Sum_probs=23.3
Q ss_pred CCCCCEEEEEcCCcHHHHH-HHHHhhhccceEEecCCCCCHHHHHHHHhhCCceEEEE
Q 008535 67 ISRGDIVAAMAPNIPALYK-LHFAVPMAGAVLSALNTRLDSATLASILRQLEAKIIFV 123 (562)
Q Consensus 67 v~~gd~V~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (562)
+++||.|++..+.-..... ...++-+.|+.+..++.. +.+++...++. +.++|++
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~i 155 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYL 155 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEE
Confidence 3556655444432221111 122334455555555432 34445444432 3444543
No 329
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=20.26 E-value=2.6e+02 Score=26.56 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=44.2
Q ss_pred eeccHHHHHHH-----HH-HHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEE
Q 008535 44 VRFSWRQTHQI-----CL-KLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLS 98 (562)
Q Consensus 44 ~~~Ty~el~~~-----~~-~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (562)
..+.|.++.+. .. .++..+..+|+.+.+.|++.|..+...-+..+|+-.+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 46899999882 33 334444479999999999999999999999999999996655
No 330
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=20.15 E-value=2.6e+02 Score=24.53 Aligned_cols=62 Identities=8% Similarity=0.033 Sum_probs=41.7
Q ss_pred cCCCCCChHHHHHHHHHHcCCceEEEECC----eeccHH-HH-HHHHHHHHHHHHHcCCCCCCEEEEEc
Q 008535 15 ANNVPLTPIDFLERAAHVYGDATSIIYGT----VRFSWR-QT-HQICLKLASALAQLKISRGDIVAAMA 77 (562)
Q Consensus 15 ~~~~~~ti~~~l~~~a~~~p~~~a~~~~~----~~~Ty~-el-~~~~~~~a~~L~~~gv~~gd~V~i~~ 77 (562)
.+.......+-+....+.+|...+.+.+. .+=.|. .| .++++.++.+|.+.|+.++ ++.+..
T Consensus 94 l~p~~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 94 LKPKAQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred cCHhHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 33334456667777888899777777644 223333 23 5679999999999998877 665543
No 331
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=20.13 E-value=8.3e+02 Score=23.97 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=64.9
Q ss_pred HHHHcCCceEEEECCeec--cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCH
Q 008535 29 AAHVYGDATSIIYGTVRF--SWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDS 106 (562)
Q Consensus 29 ~a~~~p~~~a~~~~~~~~--Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 106 (562)
..++...++.+-.++-+. +|+ +.-.-+++.+ |...+-++.-.|+-... -+.--..|||-++|...+.+=|..++
T Consensus 34 Ls~~~g~~v~lK~E~lQ~~gSFK-~RGA~n~i~~-Ls~e~~~~~gViaaSaG--NHaQGvA~aa~~lGi~a~IvMP~~tp 109 (347)
T COG1171 34 LSERLGAEIYLKRENLQPVGSFK-IRGAYNKLSS-LSEEEERAAGVIAASAG--NHAQGVAYAAKRLGIKATIVMPETTP 109 (347)
T ss_pred hHHhhCceEEEeeccCcccccch-hhhHHHHHHh-cChhhhhcCceEEecCC--cHHHHHHHHHHHhCCCEEEEecCCCc
Confidence 333455566666655322 333 3333333443 43221122224444444 45556678999999888888888888
Q ss_pred HHHHHHHhhCCceEEEEeccchHHHHHHHh
Q 008535 107 ATLASILRQLEAKIIFVDYQFVEVVQNALD 136 (562)
Q Consensus 107 ~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 136 (562)
..-....+.+++.+++++..+.+....+.+
T Consensus 110 ~~Kv~a~r~~GaeVil~g~~~dda~~~a~~ 139 (347)
T COG1171 110 KIKVDATRGYGAEVILHGDNFDDAYAAAEE 139 (347)
T ss_pred HHHHHHHHhcCCEEEEECCCHHHHHHHHHH
Confidence 888899999999999999887766555543
No 332
>PRK09224 threonine dehydratase; Reviewed
Probab=20.06 E-value=7.5e+02 Score=25.83 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=61.0
Q ss_pred HHHcCCceEEEECCee--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHhhhccceEEecCCCCCHH
Q 008535 30 AHVYGDATSIIYGTVR--FSWRQTHQICLKLASALAQLKISRGDIVAAMAPNIPALYKLHFAVPMAGAVLSALNTRLDSA 107 (562)
Q Consensus 30 a~~~p~~~a~~~~~~~--~Ty~el~~~~~~~a~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 107 (562)
.+....++.+-.++.+ -||+. ......++....+.+ ++| ++.+..+-......++|..+|..++.+-|...+.
T Consensus 30 s~~~g~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~ 104 (504)
T PRK09224 30 SARLGNQVLLKREDLQPVFSFKL-RGAYNKMAQLTEEQL-ARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPD 104 (504)
T ss_pred HHHhCCEEEEEecCCCCCCCChH-HHHHHHHHhhhHHhc-CCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCH
Confidence 3344456666665533 35554 222333333222221 222 3445577788888889999998877666666666
Q ss_pred HHHHHHhhCCceEEEEeccchHHHHHH
Q 008535 108 TLASILRQLEAKIIFVDYQFVEVVQNA 134 (562)
Q Consensus 108 ~l~~~l~~~~~~~ii~~~~~~~~~~~~ 134 (562)
.....++.+++++++++....+....+
T Consensus 105 ~K~~~~r~~GA~Vi~~g~~~~~a~~~a 131 (504)
T PRK09224 105 IKVDAVRAFGGEVVLHGDSFDEAYAHA 131 (504)
T ss_pred HHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 666788999999999987655444433
Done!