Your job contains 1 sequence.
>008538
MASLALTPSSCSLGLHSLTSRSLKLTPRSTSTRLHSSNSNSNSLTQTNNLTFRNQYFLTN
PSLKFKRLTVQASASAGAAVAPAPEQKPQQPWQGAALKPLIASIATGLILWFVPVPSGVS
KNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIAL
AFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP
IVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQ
PIGWMDWAKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKI
MAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAAL
IAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMF
TAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV
SIVNIIIWLGVGGVWWKFIGLW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008538
(562 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2182270 - symbol:DiT1 "dicarboxylate transport... 1984 4.2e-205 1
UNIPROTKB|Q41364 - symbol:DIT1 "Dicarboxylate transporter... 1943 9.4e-201 1
TAIR|locus:2173358 - symbol:DIT2.1 "dicarboxylate transpo... 1113 8.4e-113 1
UNIPROTKB|Q8L7Z9 - symbol:DIT2 "Dicarboxylate transporter... 1076 7.0e-109 1
TIGR_CMR|CHY_0060 - symbol:CHY_0060 "anion transporter fa... 1028 8.6e-104 1
TAIR|locus:2173343 - symbol:DiT2.2 "dicarboxylate transpo... 1000 2.8e-103 2
UNIPROTKB|P75763 - symbol:ybhI "YbhI DASS Transporter" sp... 651 7.6e-64 1
UNIPROTKB|P39414 - symbol:ttdT species:83333 "Escherichia... 555 2.3e-60 2
UNIPROTKB|P0AE74 - symbol:citT "citrate:succinate antipor... 502 4.7e-48 1
TIGR_CMR|BA_2211 - symbol:BA_2211 "sodium/solute symporte... 175 3.6e-10 1
UNIPROTKB|Q9KNE0 - symbol:VC_A0025 "Transporter, NadC fam... 118 0.00066 1
TIGR_CMR|VC_A0025 - symbol:VC_A0025 "transporter, NadC fa... 118 0.00066 1
>TAIR|locus:2182270 [details] [associations]
symbol:DiT1 "dicarboxylate transporter 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015367 "oxoglutarate:malate antiporter activity" evidence=ISS]
[GO:0015743 "malate transport" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0015131 "oxaloacetate transmembrane
transporter activity" evidence=IMP;IDA] [GO:0015139
"alpha-ketoglutarate transmembrane transporter activity"
evidence=IMP;IDA] [GO:0015140 "malate transmembrane transporter
activity" evidence=IDA] [GO:0015729 "oxaloacetate transport"
evidence=IDA] [GO:0015742 "alpha-ketoglutarate transport"
evidence=IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IMP] [GO:0071423 "malate transmembrane transport"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009624 "response to nematode" evidence=IEP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0006833
"water transport" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0016126
"sterol biosynthetic process" evidence=RCA] [GO:0030243 "cellulose
metabolic process" evidence=RCA] InterPro:IPR001898 Pfam:PF00939
GO:GO:0016021 GO:GO:0005739 EMBL:CP002688 GO:GO:0016020
GO:GO:0009941 GO:GO:0009624 GO:GO:0009706 GO:GO:0006814
GO:GO:0009534 GO:GO:0015140 GO:GO:0019676 EMBL:AL353013
TIGRFAMs:TIGR00785 EMBL:AF370494 IPI:IPI00521860 PIR:T49900
RefSeq:NP_568283.2 UniGene:At.5282 STRING:Q9LXV3 PRIDE:Q9LXV3
EnsemblPlants:AT5G12860.1 GeneID:831126 KEGG:ath:AT5G12860
TAIR:At5g12860 HOGENOM:HOG000117912 InParanoid:Q9LXV3 OMA:ANTTAWE
PhylomeDB:Q9LXV3 ProtClustDB:CLSN2686250 Genevestigator:Q9LXV3
GO:GO:0015139 GO:GO:0015131 Uniprot:Q9LXV3
Length = 557
Score = 1984 (703.5 bits), Expect = 4.2e-205, P = 4.2e-205
Identities = 377/472 (79%), Positives = 400/472 (84%)
Query: 91 PWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXXXXXX 150
PWQGAA+KPL+ASIATGLILWFVPVP GV++NAWQLLAIFLATIVGII Q
Sbjct: 86 PWQGAAIKPLLASIATGLILWFVPVPEGVTRNAWQLLAIFLATIVGIITQPLPLGAVALM 145
Query: 151 XXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXXX 210
TKTLTF+AAFSAFGDPIPWLIALAFFFARGFIKTGLGNR+AYQFV+
Sbjct: 146 GLGASVLTKTLTFAAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRVAYQFVRLFGSSSL 205
Query: 211 XXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCF 270
VFSEALLAPAIPSVSARAGGIFLP+VKSLC+ACGSN GDGTEH+LGSWLMLTCF
Sbjct: 206 GLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEHRLGSWLMLTCF 265
Query: 271 QTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXXXXX 330
QTSVISSSMFLTAMAANPLSA L NTI Q IGW DWAKAA
Sbjct: 266 QTSVISSSMFLTAMAANPLSANLAFNTIKQTIGWTDWAKAAIVPGLVSLIVVPFLLYLIY 325
Query: 331 XXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGL 390
TVKSSPDAPKLAQEKL+KMGPMS NE IMA TL LTVGLW+FG +L VD VTAAILGL
Sbjct: 326 PPTVKSSPDAPKLAQEKLDKMGPMSKNELIMAATLFLTVGLWIFGAKLGVDAVTAAILGL 385
Query: 391 SILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLS 450
S+LLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLI WFSQTVVKFVGGLGLS
Sbjct: 386 SVLLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLIEWFSQTVVKFVGGLGLS 445
Query: 451 WQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGG 510
WQLSFGIL+LLYFY+HYFFASGAAHIGAMFTAFLSV++ALG PPYF A+VLAF SNLMGG
Sbjct: 446 WQLSFGILVLLYFYTHYFFASGAAHIGAMFTAFLSVSTALGTPPYFAALVLAFLSNLMGG 505
Query: 511 LTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
LTHYGIGSAP+FYGANYVPLAKWWGYGF++SIVNI+IWLGVGG WWKFIGLW
Sbjct: 506 LTHYGIGSAPIFYGANYVPLAKWWGYGFLISIVNILIWLGVGGAWWKFIGLW 557
>UNIPROTKB|Q41364 [details] [associations]
symbol:DIT1 "Dicarboxylate transporter 1, chloroplastic"
species:3562 "Spinacia oleracea" [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0015139 "alpha-ketoglutarate
transmembrane transporter activity" evidence=IDA] [GO:0015140
"malate transmembrane transporter activity" evidence=IDA]
[GO:0015742 "alpha-ketoglutarate transport" evidence=IDA]
[GO:0015743 "malate transport" evidence=IDA] [GO:0071423 "malate
transmembrane transport" evidence=IDA] InterPro:IPR001898
Pfam:PF00939 GO:GO:0016021 GO:GO:0009706 GO:GO:0006814
GO:GO:0015140 TIGRFAMs:TIGR00785 GO:GO:0015139 EMBL:U13238
TCDB:2.A.47.3.1 Uniprot:Q41364
Length = 569
Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
Identities = 367/473 (77%), Positives = 399/473 (84%)
Query: 90 QPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXXXXX 149
QPWQGA++KPL+ASI TG+I+WF+P P GVS+NAWQLLAIFL+TIVGII Q
Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 150 XXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXX 209
TKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVK
Sbjct: 157 MGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSS 216
Query: 210 XXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTC 269
VFSEALLAPAIPSVSARAGGIFLP+VKSLC+ACGSN GDGTE KLG+WLMLTC
Sbjct: 217 LGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCIACGSNVGDGTERKLGAWLMLTC 276
Query: 270 FQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXXXX 329
FQTSVISSSMFLTAMAANPLSATLT NTI + IGWMDWAKAA
Sbjct: 277 FQTSVISSSMFLTAMAANPLSATLTFNTIGKAIGWMDWAKAAFVPGLVSLIVVPLLLYVV 336
Query: 330 XXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILG 389
+KSSPDAP+LA+EKL+KMGPM+ NE IMA TLLLTVGLWVFGG+L VD VTAAILG
Sbjct: 337 YPPEIKSSPDAPRLAKEKLDKMGPMTKNESIMAVTLLLTVGLWVFGGKLGVDAVTAAILG 396
Query: 390 LSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGL 449
LS+LL+TGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFS+ VVK VGGLGL
Sbjct: 397 LSVLLITGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSENVVKVVGGLGL 456
Query: 450 SWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMG 509
SWQ+SFG+L+LLYFYSHYFFASGAAHIGAMFTAFLSVASALG PP+ A+VL+F SNLMG
Sbjct: 457 SWQMSFGVLVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFLAAIVLSFLSNLMG 516
Query: 510 GLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
GLTHYGIGSAPVFYGANYVPL +WWGYGF++SIVN+IIWLGVGG+WWK IGLW
Sbjct: 517 GLTHYGIGSAPVFYGANYVPLPQWWGYGFLISIVNLIIWLGVGGLWWKAIGLW 569
>TAIR|locus:2173358 [details] [associations]
symbol:DIT2.1 "dicarboxylate transport 2.1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015367 "oxoglutarate:malate antiporter activity" evidence=ISS]
[GO:0015743 "malate transport" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0005313 "L-glutamate transmembrane
transporter activity" evidence=IDA] [GO:0015131 "oxaloacetate
transmembrane transporter activity" evidence=IDA] [GO:0015140
"malate transmembrane transporter activity" evidence=IDA]
[GO:0015729 "oxaloacetate transport" evidence=IDA] [GO:0015813
"L-glutamate transport" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0071423 "malate transmembrane
transport" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009624 "response to nematode" evidence=IEP]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR001898 Pfam:PF00939
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
GO:GO:0009941 GO:GO:0009624 GO:GO:0009706 GO:GO:0006814
GO:GO:0005313 EMBL:AB008268 GO:GO:0009534 GO:GO:0015140
GO:GO:0019676 eggNOG:COG0471 TIGRFAMs:TIGR00785
HOGENOM:HOG000117912 GO:GO:0015131 EMBL:AY056329 EMBL:BT000654
EMBL:BT015925 IPI:IPI00530539 RefSeq:NP_201234.1 UniGene:At.23729
UniGene:At.75001 IntAct:Q9FMF7 STRING:Q9FMF7 PaxDb:Q9FMF7
PRIDE:Q9FMF7 EnsemblPlants:AT5G64290.1 GeneID:836550
KEGG:ath:AT5G64290 TAIR:At5g64290 InParanoid:Q9FMF7 OMA:YLSHYFF
PhylomeDB:Q9FMF7 ProtClustDB:CLSN2914832 Genevestigator:Q9FMF7
Uniprot:Q9FMF7
Length = 563
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 229/479 (47%), Positives = 293/479 (61%)
Query: 88 PQQPWQGAALKPLIASIATGLILWF-VPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXX 146
P QGA L PLI SI+ GLIL F VPVP GV+ WQLL+IFL+TI G++
Sbjct: 87 PSPSPQGAKLIPLILSISVGLILRFAVPVPEGVTPQGWQLLSIFLSTIAGLVLSPLPVGA 146
Query: 147 XXXXXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXX 206
TKTL+FSAAFSAF + WLI ++FFFARGF+KTGLG+RIA FVK
Sbjct: 147 WAFIGLTASIVTKTLSFSAAFSAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLG 206
Query: 207 XXXXXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLM 266
SEAL+APA+PS +ARAGGIFLPI+KSL L+ GS D + KLGS+L+
Sbjct: 207 KSTLGLSYGLTLSEALIAPAMPSTTARAGGIFLPIIKSLSLSAGSKPNDSSSRKLGSYLI 266
Query: 267 LTCFQTSVISSSMFLTAMAANPLSATLTLN---TINQPIGWMDWAKAAXXXXXXXXXXXX 323
+ FQ + SS++FLTA A N L L I+ P W+ W KAA
Sbjct: 267 QSQFQCAGNSSALFLTAAAQNLLCLKLAEELGVVISNP--WVSWFKAASLPAIISLLCTP 324
Query: 324 XXXXXXXXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPV 383
K +P+AP +A KL++MGP++ NE IM GT+LL V LW+ G L + V
Sbjct: 325 LILYKLYPPETKDTPEAPGIAATKLKQMGPVTKNEWIMVGTMLLAVTLWICGETLGIPSV 384
Query: 384 TAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKF 443
AA++GLSILLV GV+ W +CL+E AWDTL WFA L+ MAG L G++TW S V K
Sbjct: 385 VAAMIGLSILLVLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTNLGVVTWMSDCVAKV 444
Query: 444 VGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAF 503
+ L LSW +FG+L YF+ HY FAS H+GA+F+AFL++ A G P A+ LA+
Sbjct: 445 LQSLSLSWPAAFGLLQAAYFFIHYLFASQTGHVGALFSAFLAMHIAAGVPGILAALALAY 504
Query: 504 FSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
+NL G LTHY G A V+YGA YV L + GF+++ +N IIW VG WWKF+GL+
Sbjct: 505 NTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKIGFVMATINAIIWGVVGTFWWKFLGLY 563
>UNIPROTKB|Q8L7Z9 [details] [associations]
symbol:DIT2 "Dicarboxylate transporter 2, chloroplastic"
species:3562 "Spinacia oleracea" [GO:0005313 "L-glutamate
transmembrane transporter activity" evidence=IDA] [GO:0015140
"malate transmembrane transporter activity" evidence=IDA]
[GO:0015813 "L-glutamate transport" evidence=IDA] [GO:0071423
"malate transmembrane transport" evidence=IDA] InterPro:IPR001898
Pfam:PF00939 GO:GO:0016021 GO:GO:0009706 GO:GO:0006814
GO:GO:0005313 GO:GO:0015140 TIGRFAMs:TIGR00785 EMBL:AY123846
Uniprot:Q8L7Z9
Length = 564
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 216/477 (45%), Positives = 291/477 (61%)
Query: 88 PQQPWQGAALKPLIASIATGLILWF-VPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXX 146
P GA L PLI S++ GL+L F VP P+ ++ AWQLLAIFL+T+ G++
Sbjct: 88 PPPTKSGAKLIPLILSVSVGLLLRFAVPKPAELTPQAWQLLAIFLSTVAGLVLSPLPVGA 147
Query: 147 XXXXXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXX 206
TKTL F AF AF + + WLI ++FFFARGF+KTGLG+RIA FVK
Sbjct: 148 WAFLGVTASVVTKTLPFPTAFCAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLG 207
Query: 207 XXXXXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLM 266
SEAL+APA+PS +ARAGGIFLPI+KSL ++ GS G + KLG++L+
Sbjct: 208 KSTLGLSYGLTISEALVAPAMPSTTARAGGIFLPIIKSLSISSGSLPGGESRKKLGTYLI 267
Query: 267 LTCFQTSVISSSMFLTAMAANPLSATLTLNT-INQPIGWMDWAKAAXXXXXXXXXXXXXX 325
+T FQ++ SS++FLTA A N L L + W+ W KAA
Sbjct: 268 MTQFQSAGNSSALFLTAAAQNLLCLKLAEELGVKIASPWVFWLKAASLPAFVALLLTPLI 327
Query: 326 XXXXXXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTA 385
+K +P+AP LA EKL+ MGP++ NE +M GT+LL V LWVFG ++ V V A
Sbjct: 328 LYKLYPPELKDTPEAPALAAEKLKNMGPVTKNEWVMVGTMLLAVSLWVFGEKIGVSSVVA 387
Query: 386 AILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVG 445
A+LGLS+LL+ GV+ W +CL E AWDTL WFA L+ MA L G+++W S V + +
Sbjct: 388 AMLGLSVLLLLGVLDWNDCLNEKSAWDTLAWFAVLVGMASQLTNLGIVSWMSGCVARSLK 447
Query: 446 GLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFS 505
+ LSW +FGIL YF+ HY FAS H+GA+++AFL++ A G P A+ LA+ +
Sbjct: 448 TMNLSWPAAFGILQAAYFFVHYLFASQTGHVGALYSAFLAMNIASGVPGVLAALALAYNT 507
Query: 506 NLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
NL G LTHY G A V+YGA YV L + GFI++++N IW VGGVWWK +G++
Sbjct: 508 NLFGALTHYSSGQAAVYYGAGYVDLPDVFKMGFIMAVINATIWTVVGGVWWKILGIY 564
>TIGR_CMR|CHY_0060 [details] [associations]
symbol:CHY_0060 "anion transporter family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006820 "anion transport" evidence=ISS] [GO:0008509 "anion
transmembrane transporter activity" evidence=ISS]
InterPro:IPR001898 Pfam:PF00939 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0055085 GO:GO:0005215 GO:GO:0006814
eggNOG:COG0471 TIGRFAMs:TIGR00785 HOGENOM:HOG000117912 KO:K03319
RefSeq:YP_358932.1 STRING:Q3AG02 GeneID:3728641 KEGG:chy:CHY_0060
PATRIC:21273317 OMA:GGMWWKV ProtClustDB:CLSK2772264
BioCyc:CHYD246194:GJCN-60-MONOMER Uniprot:Q3AG02
Length = 466
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 203/462 (43%), Positives = 274/462 (59%)
Query: 101 IASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXXXXXXXXXXXXXTKT 160
+ + A GL +WF P+P+G+ AW LLAIF+ATI+G I Q T
Sbjct: 8 LLTCAVGLAIWFSPIPTGLDPKAWHLLAIFVATIIGFILQPLPIGAIAFISVTLSALTGI 67
Query: 161 LTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXXXXXXXXXVFSE 220
L AA + F + WLI AF FA GF+KTGLG RIAY ++ V S+
Sbjct: 68 LDAKAALAGFANSTIWLIVSAFIFAIGFVKTGLGLRIAYYLIRLLGDSTLKLGYTLVLSD 127
Query: 221 ALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMF 280
+++PA PS +ARAGG+ PIV+SL A GS G+ + K+G++LM T +Q + I+S+MF
Sbjct: 128 LIISPATPSNTARAGGVLFPIVRSLAEAFGSKPGE-SPRKVGAYLMQTAYQGNAITSAMF 186
Query: 281 LTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXXXXXXXTVKSSPDA 340
LT+MA NPL A L L T+ I W WAKAA +K +P+A
Sbjct: 187 LTSMAGNPLIALLALKTLKIDITWNLWAKAAIVPGIISILVIPYLLYKIYPPEIKKTPEA 246
Query: 341 PKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVT 400
++A ++L KMGPM EK++A + + LW +D A+LG+S +LV V+
Sbjct: 247 KEIAAKELVKMGPMKFEEKVLAIVFIGALILWATSQYTKIDATIVAMLGVSAMLVAKVID 306
Query: 401 WKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILIL 460
WK+ LAE AWDTL W L+A+AG L++ G I WF++ V + G+ SW +F IL++
Sbjct: 307 WKDVLAEKGAWDTLVWMGVLVALAGNLSELGFIPWFAKNVGNMISGI--SWFWAFVILLV 364
Query: 461 LYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAP 520
+Y Y+HY FAS AHI AM+ AF SVA A G PPY VA+ LAF SNL LTHY G +P
Sbjct: 365 VYLYAHYGFASLTAHITAMYAAFASVAVAAGAPPYLVALSLAFMSNLCMSLTHYAAGPSP 424
Query: 521 VFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
+++GA YV WW GFIVSIVN+ IW+G+G VWWK +GLW
Sbjct: 425 IYFGAGYVDQGTWWKLGFIVSIVNLFIWVGIGAVWWKALGLW 466
>TAIR|locus:2173343 [details] [associations]
symbol:DiT2.2 "dicarboxylate transporter 2.2"
species:3702 "Arabidopsis thaliana" [GO:0005215 "transporter
activity" evidence=IEA] [GO:0006814 "sodium ion transport"
evidence=IEA] [GO:0015367 "oxoglutarate:malate antiporter activity"
evidence=ISS] [GO:0015743 "malate transport" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001898 Pfam:PF00939 GO:GO:0016021 EMBL:CP002688
GO:GO:0009536 GO:GO:0055085 GO:GO:0005215 GO:GO:0009706
GO:GO:0006814 EMBL:AB008268 TIGRFAMs:TIGR00785 HOGENOM:HOG000117912
EMBL:AY045893 EMBL:AY133825 IPI:IPI00549068 RefSeq:NP_201233.1
UniGene:At.23742 PRIDE:Q9FMF8 EnsemblPlants:AT5G64280.1
GeneID:836549 KEGG:ath:AT5G64280 TAIR:At5g64280 InParanoid:Q9FMF8
OMA:LWVFGEA PhylomeDB:Q9FMF8 ProtClustDB:CLSN2914831
Genevestigator:Q9FMF8 Uniprot:Q9FMF8
Length = 549
Score = 1000 (357.1 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 208/479 (43%), Positives = 276/479 (57%)
Query: 88 PQQPWQGAALKPLIASIATGLILWF-VPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXX 146
P QP QGA L PL S++ GLI+ F +P P V+ WQLL+IFL TI G++
Sbjct: 74 PPQP-QGAKLIPLAISVSIGLIVRFLIPRPEQVTSQGWQLLSIFLFTISGLVLGPLPVGA 132
Query: 147 XXXXXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXX 206
TKTL FS AF+AF + + WLIA++FFFARGFIKTGLG+RIA FVK
Sbjct: 133 WAFIGLTASIVTKTLPFSTAFAAFTNELIWLIAISFFFARGFIKTGLGDRIATYFVKWLG 192
Query: 207 XXXXXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLM 266
F E L+ +PS ARAGG+FLP++KSL ++ GS GD + KLGS+L+
Sbjct: 193 KSTLGLSYGLAFCETLMGLIMPSTMARAGGVFLPVIKSLAISAGSYPGDPSSRKLGSFLI 252
Query: 267 LTCFQTSVISSSMFLTAMAANPLSATLTLNT---INQPIGWMDWAKAAXXXXXXXXXXXX 323
T Q S S ++ LT+ A N L L I+ P W+ W K A
Sbjct: 253 QTQLQCSGASGAILLTSAAQNLLCLKLAREVGVVISNP--WITWFKVASVPAFVSLLCTP 310
Query: 324 XXXXXXXXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPV 383
+K +P+AP A +KLE++GP++ NE IM G + TV LWVFG + + V
Sbjct: 311 LIIYKLYPPELKHTPEAPAAAAKKLERLGPITKNEWIMLGAMAFTVSLWVFGEAIGIASV 370
Query: 384 TAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKF 443
+A++GLS LL+ GV+ W +CL++ AWD+LTWFA LI MAG L G++ W S V K
Sbjct: 371 VSAMIGLSTLLLLGVINWDDCLSDKSAWDSLTWFAVLIGMAGQLTNLGVVAWMSDCVAKL 430
Query: 444 VGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAF 503
+ L L+W SF IL Y HY FAS H GA++ FL++ A G P A+ LAF
Sbjct: 431 LQSLSLTWPASFIILQACYLLIHYLFASQTGHAGALYPPFLAMQIAAGVPGVLAALCLAF 490
Query: 504 FSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
+NL G L HY G A ++YGA YV L + GF++++V IIW GVG WWKF+GL+
Sbjct: 491 NNNLSGALAHYSGGPAALYYGAGYVDLRDMFRVGFVMALVQAIIWGGVGSFWWKFLGLY 549
Score = 43 (20.2 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 1 MASLALTPSSCS---LGLHSLTSRSLKLTP 27
M SLAL S S L LH +S+S L P
Sbjct: 1 MESLALRSISLSASYLSLHRSSSKSFALLP 30
>UNIPROTKB|P75763 [details] [associations]
symbol:ybhI "YbhI DASS Transporter" species:83333
"Escherichia coli K-12" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR001898 Pfam:PF00939
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0055085
GO:GO:0005215 GO:GO:0006814 eggNOG:COG0471 TIGRFAMs:TIGR00785
HOGENOM:HOG000117912 OMA:LWVFGEA PIR:B64813 RefSeq:NP_415291.1
RefSeq:YP_489043.1 ProteinModelPortal:P75763
EnsemblBacteria:EBESCT00000004205 EnsemblBacteria:EBESCT00000015456
GeneID:12932848 GeneID:945377 KEGG:ecj:Y75_p0743 KEGG:eco:b0770
PATRIC:32116741 EchoBASE:EB3429 EcoGene:EG13665 KO:K03319
ProtClustDB:CLSK879751 BioCyc:EcoCyc:B0770-MONOMER
BioCyc:ECOL316407:JW0753-MONOMER Genevestigator:P75763
Uniprot:P75763
Length = 477
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 146/474 (30%), Positives = 234/474 (49%)
Query: 96 ALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQ------XXXXXXXXX 149
+L LI +A I+ F+P P+G+S+ AW L I+LA IVG++ +
Sbjct: 5 SLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAAS 64
Query: 150 XXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXX 209
+A S + WL+ AF + F+ TGLG RIAY +
Sbjct: 65 MVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTT 124
Query: 210 XXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTC 269
VF + +LAPA PS +ARAGGI LPI+ S+ +A GS + + ++G +LM++
Sbjct: 125 LGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEP-EKSPRRVGHYLMMSI 183
Query: 270 FQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXXXX 329
+ + +S MF TAMA N L+ + + ++ I W WA AA
Sbjct: 184 YMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTM 243
Query: 330 XXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILG 389
+K D +A+ L ++GPM EK++ G +L + W+F L VD T AI+
Sbjct: 244 YPPEIKKV-DNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVV 302
Query: 390 LSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGL 449
++ +L+ G+VTW++ + W+TL W+ +I ++ L+K W ++ + G
Sbjct: 303 MATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGH 362
Query: 450 SWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMG 509
++F ++I L YFFASG+A+I AM F +A+ G P A+ L FSN G
Sbjct: 363 G-NVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALAL-LFSNSYG 420
Query: 510 GL-THYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
G+ THYG + PV +G Y + WW G +++I+ ++ + +G WW + W
Sbjct: 421 GMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGW 474
>UNIPROTKB|P39414 [details] [associations]
symbol:ttdT species:83333 "Escherichia coli K-12"
[GO:0015297 "antiporter activity" evidence=IEA;IMP] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0006814 "sodium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR001898 Pfam:PF00939 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006814 GO:GO:0015297 EMBL:U28379
eggNOG:COG0471 HOGENOM:HOG000117911 ProtClustDB:CLSK872279
TIGRFAMs:TIGR00785 OMA:YLSHYFF EMBL:M16194 PIR:E65094
RefSeq:NP_417535.1 RefSeq:YP_491255.1 ProteinModelPortal:P39414
TCDB:2.A.47.3.3 PRIDE:P39414 EnsemblBacteria:EBESCT00000004377
EnsemblBacteria:EBESCT00000014434 GeneID:12933392 GeneID:947576
KEGG:ecj:Y75_p2989 KEGG:eco:b3063 PATRIC:32121540 EchoBASE:EB2294
EcoGene:EG12393 KO:K11106 BioCyc:EcoCyc:YGJE-MONOMER
BioCyc:ECOL316407:JW3035-MONOMER Genevestigator:P39414
Uniprot:P39414
Length = 487
Score = 555 (200.4 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 143/466 (30%), Positives = 228/466 (48%)
Query: 100 LIASIATGLILWFV--PVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXXXXXXXXXXXXX 157
L ++ TG+I+ + PVP V +A+ +I+ I++
Sbjct: 35 LYFAVFTGVIVGLILEPVPGAV-------VAMVGISIIAILSPWLLFSPEQLAQPGFKFT 87
Query: 158 TKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXXXXXXXXXV 217
K+L++ A S F + + WLI AF F G+ KTGLG RIA VK +
Sbjct: 88 AKSLSW--AVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVM 145
Query: 218 FSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISS 277
FSE +LAP PS SAR GI PI+++L S D + +GS++M ++S
Sbjct: 146 FSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTS 205
Query: 278 SMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXXXXXXXTVKSS 337
++FLTAMA N L L + + + W DW +KS
Sbjct: 206 AIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSG 265
Query: 338 PDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSI---LL 394
P+ A+ +L+ MGP+ + EK M G ++ + LW+FGG D + AA++G S+ +L
Sbjct: 266 DQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGG----DYIDAAMVGYSVVALML 321
Query: 395 VTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGL-GLSWQL 453
+ +++W + ++ AW+ W A+LI +A LN G I+WF + + G L G S +
Sbjct: 322 LLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLA---GSLSGYSPTM 378
Query: 454 SFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMG 509
LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L
Sbjct: 379 VMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAIG-LGS 435
Query: 510 GLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 555
LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W
Sbjct: 436 ILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
Score = 81 (33.6 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 87 KPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQ 140
KP W L PL A IA I+ +PVP+G+ + W A+F IVG+I +
Sbjct: 2 KPSTEWW-RYLAPL-AVIA---IIALLPVPAGLENHTWLYFAVFTGVIVGLILE 50
>UNIPROTKB|P0AE74 [details] [associations]
symbol:citT "citrate:succinate antiporter" species:83333
"Escherichia coli K-12" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR001898 Pfam:PF00939 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006814 GO:GO:0015297 EMBL:U82598
PIR:B64795 RefSeq:NP_415145.1 RefSeq:YP_488901.1
ProteinModelPortal:P0AE74 TCDB:2.A.47.3.2
EnsemblBacteria:EBESCT00000000394 EnsemblBacteria:EBESCT00000018164
GeneID:12930908 GeneID:949070 KEGG:ecj:Y75_p0601 KEGG:eco:b0612
PATRIC:32116404 EchoBASE:EB3308 EcoGene:EG13538 eggNOG:COG0471
HOGENOM:HOG000117911 KO:K09477 OMA:SRRIGGY ProtClustDB:CLSK872279
BioCyc:EcoCyc:B0612-MONOMER BioCyc:ECOL316407:JW0604-MONOMER
Genevestigator:P0AE74 TIGRFAMs:TIGR00785 Uniprot:P0AE74
Length = 487
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 135/476 (28%), Positives = 213/476 (44%)
Query: 88 PQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQXXXXXXX 147
P Q W A+ +A I G+IL P+P+ A +A+ + ++G +
Sbjct: 31 PPQAWHYFAV--FVAMIV-GMIL--EPIPA----TAISFIAVTIC-VIG--SNYLLFDAK 78
Query: 148 XXXXXXXXXXTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXX 207
+ L + A F WL+ AF FA G+ +GLG RIA VK
Sbjct: 79 ELADPAFNAQKQALKWGLA--GFSSTTVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGK 136
Query: 208 XXXXXXXXXVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLML 267
V + LLAP PS +AR GG P++K+L S D + ++G +LM
Sbjct: 137 RTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMW 196
Query: 268 TCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAXXXXXXXXXXXXXXXX 327
++ +SSSMF+T A N L I W+ W
Sbjct: 197 MMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSY 256
Query: 328 XXXXXTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAI 387
+ S + A ++L+ MG ++ E + G +LL++GLWVFG + ++ +
Sbjct: 257 VLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGLWVFGSEV-INATAVGL 315
Query: 388 LGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGL 447
L +S++L VV WK+ + AW+TL A L+ MA L + G I WF+ T+ + G
Sbjct: 316 LAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGF 375
Query: 448 GLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASAL-GCPPYFVAMVLAFFSN 506
S + +L+L+++++HY FAS +AH M L+V + G P + ++L
Sbjct: 376 --SPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIG 433
Query: 507 LMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
+MG LT Y G + YG YV +W G I ++ I + L VG W + +W
Sbjct: 434 IMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG---WPILAMW 486
>TIGR_CMR|BA_2211 [details] [associations]
symbol:BA_2211 "sodium/solute symporter family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0006810
"transport" evidence=ISS] [GO:0015370 "solute:sodium symporter
activity" evidence=ISS] InterPro:IPR001898 Pfam:PF00939
GO:GO:0016020 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0055085 GO:GO:0005215 GO:GO:0006814
RefSeq:NP_844603.1 RefSeq:YP_018853.1 RefSeq:YP_028318.1
DNASU:1085632 EnsemblBacteria:EBBACT00000013256
EnsemblBacteria:EBBACT00000016088 EnsemblBacteria:EBBACT00000022257
GeneID:1085632 GeneID:2815121 GeneID:2848480 KEGG:ban:BA_2211
KEGG:bar:GBAA_2211 KEGG:bat:BAS2055 HOGENOM:HOG000089355
OMA:YQSAVLV ProtClustDB:CLSK902294
BioCyc:BANT260799:GJAJ-2123-MONOMER
BioCyc:BANT261594:GJ7F-2200-MONOMER Uniprot:Q81R47
Length = 476
Score = 175 (66.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 91/401 (22%), Positives = 153/401 (38%)
Query: 101 IASIATGLILWFVPV-PSGVSKNA-WQLLAIFLATIVGIIAQXXXXXXXXXXXXXXXXXT 158
+ +A LI+ V + PS ++ A W L F + I+ +
Sbjct: 24 VLPVALILIVEIVLLLPSSLTMEAKWSLFG-FCSAIILWTTTTINSAYIALGSVLFLIIS 82
Query: 159 KTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKXXXXXXXXXXXXXVF 218
T F + + WL+ +F R TGL ++ Y V +
Sbjct: 83 GTAKQDLLFDSLASDVIWLMIGSFILGRALQITGLAEKMTYFVVNRARNISGLCWILTMI 142
Query: 219 SEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSS 278
+ +LA IPS S RA + LP+ +++C GS ++ L + ++S+S
Sbjct: 143 IQ-ILAFFIPSTSGRAA-VVLPVFQAICKEIGSR-------RIAKALAILMPTVILVSTS 193
Query: 279 MFLTAMAANPLSATLTLNTINQP----IGWMDWAKAAXXXXXXXXXXXXXXXXXXXXXTV 334
+ A + L A LN N + W+ W V
Sbjct: 194 STIIG-AGSHLIALDMLNEFNNKNITFVEWLIWG-LPFGIIMSFISCRVILVLFLDKEEV 251
Query: 335 KSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILL 394
K+ KL Q+K++ +S NEK L+ V W+ ++ T I+G+ +L
Sbjct: 252 KT-----KLQQKKVKF--ELSRNEKYTISILIAMVAFWLTEWLHGLEIATVTIIGVFLLT 304
Query: 395 VT--GVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQ 452
+ GV+ WKE L + V+W+ + + A IA+ L + G W Q + V L ++ Q
Sbjct: 305 LPKLGVMQWKESL-KGVSWNLILFVGAAIALGKSLMESGAAQWIMQNLF-LVTEL-INKQ 361
Query: 453 LSFGIL---ILLYFYSHYFFASGAAHIGAMFTAFLSVASAL 490
F +L ++L SH + S L AS+L
Sbjct: 362 SIFIVLLVIVILSVTSHLYITSHTTRAVIFIPPLLYFASSL 402
>UNIPROTKB|Q9KNE0 [details] [associations]
symbol:VC_A0025 "Transporter, NadC family" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0005215
"transporter activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] InterPro:IPR001898 Pfam:PF00939 PROSITE:PS01271
GO:GO:0016020 GO:GO:0055085 GO:GO:0005215 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006814 TIGRFAMs:TIGR00785
KO:K14445 PIR:B82510 RefSeq:NP_232426.1 PDB:4F35 PDBsum:4F35
DIP:DIP-59985N DNASU:2612526 GeneID:2612526 KEGG:vch:VCA0025
PATRIC:20084641 OMA:MDSTAVC ProtClustDB:CLSK869458 Uniprot:Q9KNE0
Length = 462
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 44/205 (21%), Positives = 88/205 (42%)
Query: 360 IMAGTLLLTVGLWVFGGRLNV------DPVTAAILGLSILL-VTGVVTWKECLAESVAWD 412
+ G LTV LW+F +N T LG ++L VV WKE + ++ W
Sbjct: 263 VTLGIFGLTVFLWIFSSPINAALGGFKSFDTLVALGAILMLSFARVVHWKE-IQKTADWG 321
Query: 413 TLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASG 472
L F + ++ L + G + + + V +G+ + + + + F + FAS
Sbjct: 322 VLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGI-FVVILVVATFVVFLTE--FASN 378
Query: 473 AAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAK 532
A + F +VA A G P +++++A ++ L +A VF + ++ ++
Sbjct: 379 TASAALLIPVFATVAEAFGMSPVLLSVLIAVAASCAFMLPVATPPNAIVF-ASGHIKQSE 437
Query: 533 WWGYGFIVSIVNIIIWLGVGGVWWK 557
G ++I I + + ++W+
Sbjct: 438 MMRVGLYLNIACIGLLTAIAMLFWQ 462
>TIGR_CMR|VC_A0025 [details] [associations]
symbol:VC_A0025 "transporter, NadC family" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005215 "transporter
activity" evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR001898 Pfam:PF00939 PROSITE:PS01271 GO:GO:0016020
GO:GO:0055085 GO:GO:0005215 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0006814 TIGRFAMs:TIGR00785 KO:K14445 PIR:B82510
RefSeq:NP_232426.1 PDB:4F35 PDBsum:4F35 DIP:DIP-59985N
DNASU:2612526 GeneID:2612526 KEGG:vch:VCA0025 PATRIC:20084641
OMA:MDSTAVC ProtClustDB:CLSK869458 Uniprot:Q9KNE0
Length = 462
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 44/205 (21%), Positives = 88/205 (42%)
Query: 360 IMAGTLLLTVGLWVFGGRLNV------DPVTAAILGLSILL-VTGVVTWKECLAESVAWD 412
+ G LTV LW+F +N T LG ++L VV WKE + ++ W
Sbjct: 263 VTLGIFGLTVFLWIFSSPINAALGGFKSFDTLVALGAILMLSFARVVHWKE-IQKTADWG 321
Query: 413 TLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASG 472
L F + ++ L + G + + + V +G+ + + + + F + FAS
Sbjct: 322 VLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGI-FVVILVVATFVVFLTE--FASN 378
Query: 473 AAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAK 532
A + F +VA A G P +++++A ++ L +A VF + ++ ++
Sbjct: 379 TASAALLIPVFATVAEAFGMSPVLLSVLIAVAASCAFMLPVATPPNAIVF-ASGHIKQSE 437
Query: 533 WWGYGFIVSIVNIIIWLGVGGVWWK 557
G ++I I + + ++W+
Sbjct: 438 MMRVGLYLNIACIGLLTAIAMLFWQ 462
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 562 475 0.00078 119 3 11 22 0.46 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 625 (66 KB)
Total size of DFA: 293 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.46u 0.15s 34.61t Elapsed: 00:00:01
Total cpu time: 34.46u 0.15s 34.61t Elapsed: 00:00:01
Start: Fri May 10 00:32:43 2013 End: Fri May 10 00:32:44 2013