BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008538
(562 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXV3|DIT1_ARATH Dicarboxylate transporter 1, chloroplastic OS=Arabidopsis thaliana
GN=DIT1 PE=1 SV=1
Length = 557
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/568 (80%), Positives = 494/568 (86%), Gaps = 17/568 (2%)
Query: 1 MASLALTPSSCSLGLHSLTSRSLKLTPRSTSTRLH------SSNSNSNSLTQTNNLTFRN 54
MASLAL+ SCSL L SRSL L PR S+ L+ S +S + L ++ R
Sbjct: 1 MASLALS-GSCSLAF-PLKSRSLSL-PRPPSSSLNLTKPLRSLDSRFSLLKSPLPVSLRR 57
Query: 55 QYFLTNPSLKFKRLTVQASASAGAAVAPAPEQKPQQPWQGAALKPLIASIATGLILWFVP 114
+ ++ +K AS+S + PAP PWQGAA+KPL+ASIATGLILWFVP
Sbjct: 58 R---SSTLVKASSTVASASSSPTPPLVPAPV-----PWQGAAIKPLLASIATGLILWFVP 109
Query: 115 VPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPI 174
VP GV++NAWQLLAIFLATIVGII QPLPLGAVAL+GLGASVLTKTLTF+AAFSAFGDPI
Sbjct: 110 VPEGVTRNAWQLLAIFLATIVGIITQPLPLGAVALMGLGASVLTKTLTFAAAFSAFGDPI 169
Query: 175 PWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARA 234
PWLIALAFFFARGFIKTGLGNR+AYQFV+LFGSSSLGLGYSLVFSEALLAPAIPSVSARA
Sbjct: 170 PWLIALAFFFARGFIKTGLGNRVAYQFVRLFGSSSLGLGYSLVFSEALLAPAIPSVSARA 229
Query: 235 GGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLT 294
GGIFLP+VKSLC+ACGSN GDGTEH+LGSWLMLTCFQTSVISSSMFLTAMAANPLSA L
Sbjct: 230 GGIFLPLVKSLCVACGSNVGDGTEHRLGSWLMLTCFQTSVISSSMFLTAMAANPLSANLA 289
Query: 295 LNTINQPIGWMDWAKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPM 354
NTI Q IGW DWAKAAIVPGLVSLIVVP LLY+IYPPTVKSSPDAPKLAQEKL+KMGPM
Sbjct: 290 FNTIKQTIGWTDWAKAAIVPGLVSLIVVPFLLYLIYPPTVKSSPDAPKLAQEKLDKMGPM 349
Query: 355 STNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTL 414
S NE IMA TL LTVGLW+FG +L VD VTAAILGLS+LLVTGVVTWKECLAESVAWDTL
Sbjct: 350 SKNELIMAATLFLTVGLWIFGAKLGVDAVTAAILGLSVLLVTGVVTWKECLAESVAWDTL 409
Query: 415 TWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAA 474
TWFAALIAMAGYLNKYGLI WFSQTVVKFVGGLGLSWQLSFGIL+LLYFY+HYFFASGAA
Sbjct: 410 TWFAALIAMAGYLNKYGLIEWFSQTVVKFVGGLGLSWQLSFGILVLLYFYTHYFFASGAA 469
Query: 475 HIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWW 534
HIGAMFTAFLSV++ALG PPYF A+VLAF SNLMGGLTHYGIGSAP+FYGANYVPLAKWW
Sbjct: 470 HIGAMFTAFLSVSTALGTPPYFAALVLAFLSNLMGGLTHYGIGSAPIFYGANYVPLAKWW 529
Query: 535 GYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
GYGF++SIVNI+IWLGVGG WWKFIGLW
Sbjct: 530 GYGFLISIVNILIWLGVGGAWWKFIGLW 557
>sp|Q41364|DIT1_SPIOL Dicarboxylate transporter 1, chloroplastic OS=Spinacia oleracea
GN=DIT1 PE=1 SV=1
Length = 569
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/573 (77%), Positives = 498/573 (86%), Gaps = 15/573 (2%)
Query: 1 MASLALTPSSCSLGLHSLTSRSL-KLTPRSTSTRLHSSNSNSNSLTQTNNLTFRNQYFLT 59
MAS+AL+ +S +SL+ RSL L P S S S S ++ +++ +L+ +++FL+
Sbjct: 1 MASMALSLTSSPT--YSLSFRSLPSLKPLSKSQPSISLPSLRSNASKSPSLS--HKHFLS 56
Query: 60 NPSL----KFKRLTVQASASAGAAVAPAPEQKPQ------QPWQGAALKPLIASIATGLI 109
PSL K K ++ + + AP P P QPWQGA++KPL+ASI TG+I
Sbjct: 57 PPSLLLPHKLKPISASSPTNPPPPPAPVPSPAPVSAPAQVQPWQGASIKPLLASILTGVI 116
Query: 110 LWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSA 169
+WF+P P GVS+NAWQLLAIFL+TIVGII QPLPLGAVAL+GLGASVLTKTLTFSAAFSA
Sbjct: 117 IWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVALMGLGASVLTKTLTFSAAFSA 176
Query: 170 FGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPS 229
FGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPS
Sbjct: 177 FGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPS 236
Query: 230 VSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPL 289
VSARAGGIFLP+VKSLC+ACGSN GDGTE KLG+WLMLTCFQTSVISSSMFLTAMAANPL
Sbjct: 237 VSARAGGIFLPLVKSLCIACGSNVGDGTERKLGAWLMLTCFQTSVISSSMFLTAMAANPL 296
Query: 290 SATLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLE 349
SATLT NTI + IGWMDWAKAA VPGLVSLIVVPLLLY++YPP +KSSPDAP+LA+EKL+
Sbjct: 297 SATLTFNTIGKAIGWMDWAKAAFVPGLVSLIVVPLLLYVVYPPEIKSSPDAPRLAKEKLD 356
Query: 350 KMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLAESV 409
KMGPM+ NE IMA TLLLTVGLWVFGG+L VD VTAAILGLS+LL+TGVVTWKECLAESV
Sbjct: 357 KMGPMTKNESIMAVTLLLTVGLWVFGGKLGVDAVTAAILGLSVLLITGVVTWKECLAESV 416
Query: 410 AWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFF 469
AWDTLTWFAALIAMAGYLNKYGLITWFS+ VVK VGGLGLSWQ+SFG+L+LLYFYSHYFF
Sbjct: 417 AWDTLTWFAALIAMAGYLNKYGLITWFSENVVKVVGGLGLSWQMSFGVLVLLYFYSHYFF 476
Query: 470 ASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVP 529
ASGAAHIGAMFTAFLSVASALG PP+ A+VL+F SNLMGGLTHYGIGSAPVFYGANYVP
Sbjct: 477 ASGAAHIGAMFTAFLSVASALGTPPFLAAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVP 536
Query: 530 LAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
L +WWGYGF++SIVN+IIWLGVGG+WWK IGLW
Sbjct: 537 LPQWWGYGFLISIVNLIIWLGVGGLWWKAIGLW 569
>sp|O34726|YFLS_BACSU Putative malate transporter YflS OS=Bacillus subtilis (strain 168)
GN=yflS PE=2 SV=1
Length = 478
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/478 (52%), Positives = 342/478 (71%), Gaps = 2/478 (0%)
Query: 85 EQKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPL 144
+K L PL+ ++A GLI+WF+P PSG+ AW L AIF+ATI+G I++PLP+
Sbjct: 3 SEKDAGKQSAVKLVPLLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPM 62
Query: 145 GAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKL 204
GA+A+ L + LT TL+ S FG+ WLI +AFF +RGFIKTGLG RI+Y FV+
Sbjct: 63 GAIAIFALAVTALTGTLSIEDTLSGFGNKTIWLIVIAFFISRGFIKTGLGARISYVFVQK 122
Query: 205 FGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSW 264
FG +LGL YSL+FS+ +L+PAIPS +ARAGGI PI++SL GS+ +GTE K+G++
Sbjct: 123 FGKKTLGLSYSLLFSDLILSPAIPSNTARAGGIIFPIIRSLSETFGSSPANGTERKIGAF 182
Query: 265 LMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPL 324
L+ T FQ ++I+S+MFLTAMAANPL A L + + W WA AAIVPGLVSLI+ PL
Sbjct: 183 LLKTGFQGNLITSAMFLTAMAANPLIAKLAHDVAGVDLTWTSWAIAAIVPGLVSLIITPL 242
Query: 325 LLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVT 384
++Y +YPP +K +PDA K+A EKL++MGP +E M LL + LW+FGG N+D T
Sbjct: 243 VIYKLYPPEIKETPDAAKIATEKLKEMGPFKKSELSMVIVFLLVLVLWIFGGSFNIDATT 302
Query: 385 AAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFV 444
A++GL++LL++ V+TW + E AWDTLTWFAAL+ +A +LN+ G+++WFS + V
Sbjct: 303 TALIGLAVLLLSQVLTWDDIKKEQGAWDTLTWFAALVMLANFLNELGMVSWFSNAMKSSV 362
Query: 445 GGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFF 504
G SW ++F ILI++Y+YSHYFFAS AHI AM++AFL+V A G PP A+ LAF
Sbjct: 363 S--GFSWIVAFIILIVVYYYSHYFFASATAHISAMYSAFLAVVVAAGAPPLLAALSLAFI 420
Query: 505 SNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
SNL G THYG G+APVF+GA Y+P KWW GFI+SIV+II+WL +GG+WWK +G+W
Sbjct: 421 SNLFGSTTHYGSGAAPVFFGAGYIPQGKWWSIGFILSIVHIIVWLVIGGLWWKVLGIW 478
>sp|Q9FMF7|DIT21_ARATH Dicarboxylate transporter 2.1, chloroplastic OS=Arabidopsis
thaliana GN=DIT2-1 PE=1 SV=1
Length = 563
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/474 (53%), Positives = 330/474 (69%), Gaps = 6/474 (1%)
Query: 93 QGAALKPLIASIATGLILWF-VPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLG 151
QGA L PLI SI+ GLIL F VPVP GV+ WQLL+IFL+TI G++ PLP+GA A +G
Sbjct: 92 QGAKLIPLILSISVGLILRFAVPVPEGVTPQGWQLLSIFLSTIAGLVLSPLPVGAWAFIG 151
Query: 152 LGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLG 211
L AS++TKTL+FSAAFSAF + WLI ++FFFARGF+KTGLG+RIA FVK G S+LG
Sbjct: 152 LTASIVTKTLSFSAAFSAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLG 211
Query: 212 LGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQ 271
L Y L SEAL+APA+PS +ARAGGIFLPI+KSL L+ GS D + KLGS+L+ + FQ
Sbjct: 212 LSYGLTLSEALIAPAMPSTTARAGGIFLPIIKSLSLSAGSKPNDSSSRKLGSYLIQSQFQ 271
Query: 272 TSVISSSMFLTAMAANPLSATLTLN---TINQPIGWMDWAKAAIVPGLVSLIVVPLLLYI 328
+ SS++FLTA A N L L I+ P W+ W KAA +P ++SL+ PL+LY
Sbjct: 272 CAGNSSALFLTAAAQNLLCLKLAEELGVVISNP--WVSWFKAASLPAIISLLCTPLILYK 329
Query: 329 IYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAIL 388
+YPP K +P+AP +A KL++MGP++ NE IM GT+LL V LW+ G L + V AA++
Sbjct: 330 LYPPETKDTPEAPGIAATKLKQMGPVTKNEWIMVGTMLLAVTLWICGETLGIPSVVAAMI 389
Query: 389 GLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLG 448
GLSILLV GV+ W +CL+E AWDTL WFA L+ MAG L G++TW S V K + L
Sbjct: 390 GLSILLVLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTNLGVVTWMSDCVAKVLQSLS 449
Query: 449 LSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLM 508
LSW +FG+L YF+ HY FAS H+GA+F+AFL++ A G P A+ LA+ +NL
Sbjct: 450 LSWPAAFGLLQAAYFFIHYLFASQTGHVGALFSAFLAMHIAAGVPGILAALALAYNTNLF 509
Query: 509 GGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
G LTHY G A V+YGA YV L + GF+++ +N IIW VG WWKF+GL+
Sbjct: 510 GALTHYSSGQAAVYYGAGYVDLPDVFKIGFVMATINAIIWGVVGTFWWKFLGLY 563
>sp|Q8L7Z9|DIT2_SPIOL Dicarboxylate transporter 2, chloroplastic OS=Spinacia oleracea
GN=DIT2 PE=1 SV=1
Length = 564
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/546 (48%), Positives = 356/546 (65%), Gaps = 18/546 (3%)
Query: 28 RSTSTRLHSSNSN---SNSLTQTNNLTFRNQYFLT----NPSLKFKRLTVQASASAGAAV 80
RS++T LH + S S T LTF + P L K L AS+S+ A
Sbjct: 26 RSSTTSLHHRRPHLSLSLSSTPKPTLTFSSHSHSHSLSSKPLLALKPLNATASSSSSPAT 85
Query: 81 APAPEQKPQQPWQGAALKPLIASIATGLILWF-VPVPSGVSKNAWQLLAIFLATIVGIIA 139
P K GA L PLI S++ GL+L F VP P+ ++ AWQLLAIFL+T+ G++
Sbjct: 86 TSPPPTK-----SGAKLIPLILSVSVGLLLRFAVPKPAELTPQAWQLLAIFLSTVAGLVL 140
Query: 140 QPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAY 199
PLP+GA A LG+ ASV+TKTL F AF AF + + WLI ++FFFARGF+KTGLG+RIA
Sbjct: 141 SPLPVGAWAFLGVTASVVTKTLPFPTAFCAFTNEVIWLIVISFFFARGFVKTGLGDRIAT 200
Query: 200 QFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEH 259
FVK G S+LGL Y L SEAL+APA+PS +ARAGGIFLPI+KSL ++ GS G +
Sbjct: 201 YFVKWLGKSTLGLSYGLTISEALVAPAMPSTTARAGGIFLPIIKSLSISSGSLPGGESRK 260
Query: 260 KLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLN---TINQPIGWMDWAKAAIVPGL 316
KLG++L++T FQ++ SS++FLTA A N L L I P W+ W KAA +P
Sbjct: 261 KLGTYLIMTQFQSAGNSSALFLTAAAQNLLCLKLAEELGVKIASP--WVFWLKAASLPAF 318
Query: 317 VSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGG 376
V+L++ PL+LY +YPP +K +P+AP LA EKL+ MGP++ NE +M GT+LL V LWVFG
Sbjct: 319 VALLLTPLILYKLYPPELKDTPEAPALAAEKLKNMGPVTKNEWVMVGTMLLAVSLWVFGE 378
Query: 377 RLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWF 436
++ V V AA+LGLS+LL+ GV+ W +CL E AWDTL WFA L+ MA L G+++W
Sbjct: 379 KIGVSSVVAAMLGLSVLLLLGVLDWNDCLNEKSAWDTLAWFAVLVGMASQLTNLGIVSWM 438
Query: 437 SQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYF 496
S V + + + LSW +FGIL YF+ HY FAS H+GA+++AFL++ A G P
Sbjct: 439 SGCVARSLKTMNLSWPAAFGILQAAYFFVHYLFASQTGHVGALYSAFLAMNIASGVPGVL 498
Query: 497 VAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWW 556
A+ LA+ +NL G LTHY G A V+YGA YV L + GFI++++N IW VGGVWW
Sbjct: 499 AALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKMGFIMAVINATIWTVVGGVWW 558
Query: 557 KFIGLW 562
K +G++
Sbjct: 559 KILGIY 564
>sp|Q9FMF8|DIT22_ARATH Dicarboxylate transporter 2.2, chloroplastic OS=Arabidopsis
thaliana GN=DIT2-2 PE=2 SV=1
Length = 549
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/560 (45%), Positives = 347/560 (61%), Gaps = 23/560 (4%)
Query: 15 LHSLTSRSLKLTPRSTSTRLHSSNSNSNSLTQTNNLTFRNQYFLTNPSLKFKRLTVQASA 74
+ SL RS+ L+ S LH S+S S +L + ++ L + S+ R T++A+A
Sbjct: 1 MESLALRSISLSASYLS--LHRSSSKSFALLPPS-ISVHTSPTLRSLSISSPRFTLRATA 57
Query: 75 SAGAAVAPAPEQKPQQPWQ--------GAALKPLIASIATGLILWF-VPVPSGVSKNAWQ 125
S+ PE++ + GA L PL S++ GLI+ F +P P V+ WQ
Sbjct: 58 SS------LPEEQNKPQPPPPSPPQPQGAKLIPLAISVSIGLIVRFLIPRPEQVTSQGWQ 111
Query: 126 LLAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFA 185
LL+IFL TI G++ PLP+GA A +GL AS++TKTL FS AF+AF + + WLIA++FFFA
Sbjct: 112 LLSIFLFTISGLVLGPLPVGAWAFIGLTASIVTKTLPFSTAFAAFTNELIWLIAISFFFA 171
Query: 186 RGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSL 245
RGFIKTGLG+RIA FVK G S+LGL Y L F E L+ +PS ARAGG+FLP++KSL
Sbjct: 172 RGFIKTGLGDRIATYFVKWLGKSTLGLSYGLAFCETLMGLIMPSTMARAGGVFLPVIKSL 231
Query: 246 CLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNT---INQPI 302
++ GS GD + KLGS+L+ T Q S S ++ LT+ A N L L I+ P
Sbjct: 232 AISAGSYPGDPSSRKLGSFLIQTQLQCSGASGAILLTSAAQNLLCLKLAREVGVVISNP- 290
Query: 303 GWMDWAKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMA 362
W+ W K A VP VSL+ PL++Y +YPP +K +P+AP A +KLE++GP++ NE IM
Sbjct: 291 -WITWFKVASVPAFVSLLCTPLIIYKLYPPELKHTPEAPAAAAKKLERLGPITKNEWIML 349
Query: 363 GTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIA 422
G + TV LWVFG + + V +A++GLS LL+ GV+ W +CL++ AWD+LTWFA LI
Sbjct: 350 GAMAFTVSLWVFGEAIGIASVVSAMIGLSTLLLLGVINWDDCLSDKSAWDSLTWFAVLIG 409
Query: 423 MAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTA 482
MAG L G++ W S V K + L L+W SF IL Y HY FAS H GA++
Sbjct: 410 MAGQLTNLGVVAWMSDCVAKLLQSLSLTWPASFIILQACYLLIHYLFASQTGHAGALYPP 469
Query: 483 FLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSI 542
FL++ A G P A+ LAF +NL G L HY G A ++YGA YV L + GF++++
Sbjct: 470 FLAMQIAAGVPGVLAALCLAFNNNLSGALAHYSGGPAALYYGAGYVDLRDMFRVGFVMAL 529
Query: 543 VNIIIWLGVGGVWWKFIGLW 562
V IIW GVG WWKF+GL+
Sbjct: 530 VQAIIWGGVGSFWWKFLGLY 549
>sp|P75763|YBHI_ECOLI Inner membrane protein YbhI OS=Escherichia coli (strain K12)
GN=ybhI PE=1 SV=1
Length = 477
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 269/475 (56%), Gaps = 13/475 (2%)
Query: 96 ALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGAS 155
+L LI +A I+ F+P P+G+S+ AW L I+LA IVG++ +P P V L+ + AS
Sbjct: 5 SLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAAS 64
Query: 156 VLT------KTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSS 209
++ +A S + WL+ AF + F+ TGLG RIAY + G+++
Sbjct: 65 MVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTT 124
Query: 210 LGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTC 269
LGLGY VF + +LAPA PS +ARAGGI LPI+ S+ +A GS + + ++G +LM++
Sbjct: 125 LGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEP-EKSPRRVGHYLMMSI 183
Query: 270 FQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPLLLYII 329
+ + +S MF TAMA N L+ + + ++ I W WA AA +PG++ L+V PL++Y +
Sbjct: 184 YMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTM 243
Query: 330 YPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILG 389
YPP +K D +A+ L ++GPM EK++ G +L + W+F L VD T AI+
Sbjct: 244 YPPEIKKV-DNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVV 302
Query: 390 LSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGL 449
++ +L+ G+VTW++ + W+TL W+ +I ++ L+K W ++ F L
Sbjct: 303 MATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEV---FKNNLAF 359
Query: 450 SWQ--LSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNL 507
++F ++I L YFFASG+A+I AM F +A+ G P A+ L F ++
Sbjct: 360 DGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSY 419
Query: 508 MGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIGLW 562
G +THYG + PV +G Y + WW G +++I+ ++ + +G WW + W
Sbjct: 420 GGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGW 474
>sp|Q57048|Y020_HAEIN Uncharacterized transporter HI_0020 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0020
PE=3 SV=1
Length = 479
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 263/474 (55%), Gaps = 23/474 (4%)
Query: 100 LIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQP-----LPLGAVALLGL-- 152
L+ +A LI + +P P G+S AW+LL +++ATIVG++ +P + L A+A+ G+
Sbjct: 9 LVILMAIPLITFLLPAPDGLSLIAWRLLGVYIATIVGLVLKPYGEPVILLAAIAVSGVII 68
Query: 153 ----GASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSS 208
GA L K + WLI AF + F+ TGLG RIAY + GS+
Sbjct: 69 GNTEGAKELVKV---GNMLDGYKSGTTWLIFTAFTLSSAFVITGLGKRIAYHMIGAMGST 125
Query: 209 SLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLT 268
+L LGY +F + LL+PA PS +AR+GGI PI+ S+ +A GS+ + + K G +LM+
Sbjct: 126 TLRLGYVTMFLDLLLSPATPSNTARSGGIIFPIINSVVVALGSDP-EKSPKKAGRYLMMN 184
Query: 269 CFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPLLLYI 328
+ +S +FLTAMA N L+ +L + W+ W AA VPGL+ L ++PL+ Y
Sbjct: 185 VYMVVKTTSYIFLTAMAPNALALSLMAPILGFETTWIKWFLAASVPGLLCLFLIPLICYW 244
Query: 329 IYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAIL 388
+ PP +K D +A++ LE++GPMS EK ++ ++ + W+F L+++ AI+
Sbjct: 245 VSPPELKKV-DNKAIAKKGLEELGPMSFREKALSVLFVIALFGWIFSNSLHINATIVAII 303
Query: 389 GLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQT---VVKFVG 445
+ + +V +VTW + L AW+TL W+ +I M+G L K G W + T +++F G
Sbjct: 304 VMVLCIVLSIVTWDDILKSKGAWNTLVWYGGIIGMSGLLEKSGFFKWLANTLSTILQFEG 363
Query: 446 GLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFS 505
++ +++ L Y FASG A++ AM F +V G P +A+ L F +
Sbjct: 364 ----HGMMALIVILTLSVSVRYLFASGGAYVAAMVPVFATVGHVTGAPTELLALGLVFAN 419
Query: 506 NLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFI 559
+ G +THYG G P+ +GA Y + WW G I++ ++II L +G WWK +
Sbjct: 420 SYGGSVTHYGGGPGPIAFGAGYNDIKSWWITGAIIAFGSLIIHLTIGMAWWKLL 473
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT
PE=3 SV=1
Length = 487
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 266/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046)
GN=ttdT PE=3 SV=1
Length = 487
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 266/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLIVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escherichia coli (strain K12)
GN=ttdT PE=1 SV=2
Length = 487
Score = 245 bits (626), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 266/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3
SV=1
Length = 487
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 266/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVTLIVVFYLLRYFFASATAYTCAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=ttdT PE=3 SV=1
Length = 487
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 265/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella boydii serotype 4
(strain Sb227) GN=ttdT PE=3 SV=1
Length = 487
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 265/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVFGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 /
UPEC) GN=ttdT PE=3 SV=1
Length = 487
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 264/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +P+P+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + N + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASNATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPILKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ ++ W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIICWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ttdT PE=3 SV=1
Length = 487
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 264/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +P+P+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ KTGLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
S D + +GS++M ++S++FLTAMA N L L + N + W DW
Sbjct: 176 LYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASNATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPWLAYVLYPPILKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ ++ W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIICWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=ttdT PE=3 SV=1
Length = 487
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 264/495 (53%), Gaps = 39/495 (7%)
Query: 86 QKPQQPWQGAALKPLIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLG 145
KP W +A +A I+ +PVP+G+ + W A+F IVG+I +P+P
Sbjct: 1 MKPSTEWWR-----YLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGA 55
Query: 146 AVALLGLGA-SVLTKTLTFSA-----------------AFSAFGDPIPWLIALAFFFARG 187
VA++G+ ++L+ L FS A S F + + WLI AF F G
Sbjct: 56 VVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTG 115
Query: 188 FIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ K GLG RIA VK G +L LGY+++FSE +LAP PS SAR GI PI+++L
Sbjct: 116 YEKNGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPP 175
Query: 248 ACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDW 307
D + +GS++M ++S++FLTAMA N L L + + + W DW
Sbjct: 176 LYQLQPNDSSSRSIGSYIMWIGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
Query: 308 AKAAIVPGLVSLIVVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLL 367
+ ++ +++VP L Y++YPP +KS P+ A+ +L+ MGP+ + EK M G ++
Sbjct: 236 FLGMLPLSILLVLLVPRLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVG 295
Query: 368 TVGLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLAESVAWDTLTWFAALIAMA 424
+ LW+FGG D + AA++G S+ +L+ +++W + ++ AW+ W A+LI +A
Sbjct: 296 ALVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLA 351
Query: 425 GYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFL 484
LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A +
Sbjct: 352 TGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APM 407
Query: 485 SVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIV 540
+A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I
Sbjct: 408 MIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIF 466
Query: 541 SIVNIIIWLGVGGVW 555
++ +++ + G +W
Sbjct: 467 GLIFLVLLVITGLLW 481
>sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain K12) GN=citT PE=1 SV=1
Length = 487
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 250/482 (51%), Gaps = 25/482 (5%)
Query: 100 LIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVL-T 158
L+A + +++ +PVP G+ AW A+F+A IVG+I +P+P A++ + + V+ +
Sbjct: 11 LLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTICVIGS 70
Query: 159 KTLTFSA------AFSA-----------FGDPIPWLIALAFFFARGFIKTGLGNRIAYQF 201
L F A AF+A F WL+ AF FA G+ +GLG RIA
Sbjct: 71 NYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVSGLGRRIALFL 130
Query: 202 VKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKL 261
VK G +L LGY++V + LLAP PS +AR GG P++K+L S D + ++
Sbjct: 131 VKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPNDPSARRI 190
Query: 262 GSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIV 321
G +LM ++ +SSSMF+T A N L I W+ W + G++ LI+
Sbjct: 191 GGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCFLPVGVILLII 250
Query: 322 VPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVD 381
P L Y++Y P + S + A ++L+ MG ++ E + G +LL++GLWVFG + ++
Sbjct: 251 APWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGLWVFGSEV-IN 309
Query: 382 PVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVV 441
+L +S++L VV WK+ + AW+TL A L+ MA L + G I WF+ T+
Sbjct: 310 ATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMS 369
Query: 442 KFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASAL-GCPPYFVAMV 500
+ G S + +L+L+++++HY FAS +AH M L+V + G P + ++
Sbjct: 370 THLE--GFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCIL 427
Query: 501 LAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIG 560
L +MG LT Y G + YG YV +W G I ++ I + L VG W +
Sbjct: 428 LVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG---WPILA 484
Query: 561 LW 562
+W
Sbjct: 485 MW 486
>sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7 GN=citT PE=3 SV=1
Length = 487
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 250/482 (51%), Gaps = 25/482 (5%)
Query: 100 LIASIATGLILWFVPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVL-T 158
L+A + +++ +PVP G+ AW A+F+A IVG+I +P+P A++ + + V+ +
Sbjct: 11 LLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTICVIGS 70
Query: 159 KTLTFSA------AFSA-----------FGDPIPWLIALAFFFARGFIKTGLGNRIAYQF 201
L F A AF+A F WL+ AF FA G+ +GLG RIA
Sbjct: 71 NYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVSGLGRRIALFL 130
Query: 202 VKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKL 261
VK G +L LGY++V + LLAP PS +AR GG P++K+L S D + ++
Sbjct: 131 VKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPNDPSARRI 190
Query: 262 GSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIV 321
G +LM ++ +SSSMF+T A N L I W+ W + G++ LI+
Sbjct: 191 GGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCFLPVGVILLII 250
Query: 322 VPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLNVD 381
P L Y++Y P + S + A ++L+ MG ++ E + G +LL++GLWVFG + ++
Sbjct: 251 APWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGLWVFGSEV-IN 309
Query: 382 PVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVV 441
+L +S++L VV WK+ + AW+TL A L+ MA L + G I WF+ T+
Sbjct: 310 ATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMS 369
Query: 442 KFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASAL-GCPPYFVAMV 500
+ G S + +L+L+++++HY FAS +AH M L+V + G P + ++
Sbjct: 370 THLE--GFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCIL 427
Query: 501 LAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWKFIG 560
L +MG LT Y G + YG YV +W G I ++ I + L VG W +
Sbjct: 428 LVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG---WPILA 484
Query: 561 LW 562
+W
Sbjct: 485 MW 486
>sp|Q07252|MEMP_CUPNH Membrane protein OS=Cupriavidus necator (strain ATCC 17699 / H16 /
DSM 428 / Stanier 337) GN=H16_A0667 PE=3 SV=2
Length = 513
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 156/375 (41%), Gaps = 24/375 (6%)
Query: 113 VPVPSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVA---------LLGLGASVLTKTLTF 163
+P P G++ ++LAI IV I + + A L+G +V ++ +
Sbjct: 51 IPQPEGLTVAGQRMLAILAFAIVVWITEAVSYETSAIMITSLMAGLIGFAPTVNDPSVQY 110
Query: 164 SA------AFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLV 217
A + F + L+A A F + TGL RIA + G+S+ + +
Sbjct: 111 GTSKALGMALAGFSNTALALVAAALFISAAMTVTGLDRRIALVTLSAIGTSTRRILIGTI 170
Query: 218 FSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISS 277
L+ +PS +AR+ + +PI+ + A G + + + + +M+T Q + I +
Sbjct: 171 AVTIALSLVVPSATARSACV-VPIMMGVIAAFGVDK----KSNIAAGIMITVAQATSIWN 225
Query: 278 SMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPLLLYIIYPPTVKSS 337
TA A N L+ + + I W+ W A + +V+ L+ ++ P +
Sbjct: 226 VGIQTAAAQNLLTVGFMDKLLGERITWLQWLIAGAPWAIAMSVVLYFLVRLLLPAETDAI 285
Query: 338 PDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRLN-VDPVTAAILGLSILLV- 395
P + Q +L +GPMS +K +A L + W G+L+ D T +GL IL++
Sbjct: 286 PGGKEAVQRELSALGPMSAPQKRLAAVSLGLLLFWATEGKLHSFDTATVTFVGLVILMMP 345
Query: 396 -TGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLS 454
GV+ WK + + W TL F I++ L W Q VV G L
Sbjct: 346 RIGVMDWK-TMQQRTPWGTLIVFGVGISLGTALLSTNAGQWLGQFVVTHSGLAAHGALLV 404
Query: 455 FGILILLYFYSHYFF 469
F IL H F
Sbjct: 405 FAILSAFLILIHLGF 419
>sp|Q57486|Y608_HAEIN Uncharacterized transporter HI_0608 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0608
PE=3 SV=1
Length = 461
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 57/271 (21%)
Query: 317 VSLIVVPLL---LYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWV 373
+ +I++PL+ LYII+ P + + + E +E M PM I+ + LT W+
Sbjct: 215 IMIILLPLMIGILYIIFKPKLHLNFEQ---TFENIE-MNPMRILTFIIFPVIALT---WI 267
Query: 374 FGGRLNVDPVTAAILGLS----------------ILLVTGVVTWKECLAESVAWDTLTWF 417
F G++N P + +LGL ++ TGV +WK+ + + W L F
Sbjct: 268 FSGKIN--PFISGLLGLQKNIASFDSIVALLAAIVICSTGVASWKQ-IQSNTDWGVLMLF 324
Query: 418 AALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIG 477
+ ++ L G + ++V + G G+L+ + F S A
Sbjct: 325 GGGLTLSAVLKDSGASKILADSIVFMIDGQHFYL---IGLLVAAFIIFLTEFTSNTASAA 381
Query: 478 AMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVF------------YGA 525
+ F+S+A +LG P +A+++ GIG++ F +G+
Sbjct: 382 LLVPIFISIAQSLGMPEIGLALII-------------GIGASCAFMLPVATPPNAIVFGS 428
Query: 526 NYVPLAKWWGYGFIVSIVNIIIWLGVGGVWW 556
V ++ GF++++V +++ +G ++W
Sbjct: 429 GQVKQSEMVKVGFLLNLVCVVVIATMGYMFW 459
>sp|Q2YU56|SDCS_STAAB Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1
Length = 520
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 129/325 (39%), Gaps = 30/325 (9%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WVFGGRL--------NVDPVTAAILGLSILLVT----------GVVTWKECLAESVAWDT 413
W+ L +V T AI +SILL ++ W+ +A+ + W
Sbjct: 311 WITREFLLKKWEVTSSVADGTIAIF-ISILLFVIPAKNTEKHRRIIDWE--VAKELPWGV 367
Query: 414 LTWFAALIAMAGYLNKYGLITWFSQ 438
L F +A+A +++ GL W +
Sbjct: 368 LILFGGGLALAKGISESGLAKWLGE 392
>sp|Q8NVS5|SDCS_STAAW Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain MW2) GN=sdcS PE=3 SV=1
Length = 520
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 129/325 (39%), Gaps = 30/325 (9%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WVFGGRL--------NVDPVTAAILGLSILLVT----------GVVTWKECLAESVAWDT 413
W+ L +V T AI +SILL ++ W+ +A+ + W
Sbjct: 311 WITREFLLKKWEVTSSVADGTIAIF-ISILLFVIPAKNTEKHRRIIDWE--VAKELPWGV 367
Query: 414 LTWFAALIAMAGYLNKYGLITWFSQ 438
L F +A+A +++ GL W +
Sbjct: 368 LILFGGGLALAKGISESGLAKWLGE 392
>sp|Q6G816|SDCS_STAAS Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain MSSA476) GN=sdcS PE=3 SV=1
Length = 520
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 129/325 (39%), Gaps = 30/325 (9%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WVFGGRL--------NVDPVTAAILGLSILLVT----------GVVTWKECLAESVAWDT 413
W+ L +V T AI +SILL ++ W+ +A+ + W
Sbjct: 311 WITREFLLKKWEVTSSVADGTIAIF-ISILLFVIPAKNTEKHRRIIDWE--VAKELPWGV 367
Query: 414 LTWFAALIAMAGYLNKYGLITWFSQ 438
L F +A+A +++ GL W +
Sbjct: 368 LILFGGGLALAKGISESGLAKWLGE 392
>sp|P0A607|Y2703_MYCBO Uncharacterized transporter Mb2703 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2703 PE=3 SV=1
Length = 429
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 266 MLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAI-----VPGLVSLI 320
+L C + ++ ++S + + A+ + TL + P + ++A + + L L+
Sbjct: 124 LLVCDRLNINTTSFLMAEVFASNIGGAATL--VGDPPNIIVASRAGLTFNDFMLHLTPLV 181
Query: 321 VVPLLLYIIYPP------TVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVF 374
V+ L+ I P TV++ A +A ++ E + K A L+L +V
Sbjct: 182 VIVLIALIAVLPRLFGSITVEADRIADVMALDEGEAIRDRGLLVKCGA-VLVLVFAAFVA 240
Query: 375 GGRLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLIT 434
L++ P A+LG +L+V +T E L+ SV WDTL +FA L M G L K G++
Sbjct: 241 HPVLHIQPSLVALLGAGMLIVVSGLTRSEYLS-SVEWDTLLFFAGLFIMVGALVKTGVVN 299
Query: 435 WFSQTVVKFVGG 446
++ + GG
Sbjct: 300 DLARAATQLTGG 311
>sp|P0A606|Y2684_MYCTU Uncharacterized transporter Rv2684/MT2758 OS=Mycobacterium
tuberculosis GN=Rv2684 PE=3 SV=1
Length = 429
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 266 MLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAI-----VPGLVSLI 320
+L C + ++ ++S + + A+ + TL + P + ++A + + L L+
Sbjct: 124 LLVCDRLNINTTSFLMAEVFASNIGGAATL--VGDPPNIIVASRAGLTFNDFMLHLTPLV 181
Query: 321 VVPLLLYIIYPP------TVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVF 374
V+ L+ I P TV++ A +A ++ E + K A L+L +V
Sbjct: 182 VIVLIALIAVLPRLFGSITVEADRIADVMALDEGEAIRDRGLLVKCGA-VLVLVFAAFVA 240
Query: 375 GGRLNVDPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLIT 434
L++ P A+LG +L+V +T E L+ SV WDTL +FA L M G L K G++
Sbjct: 241 HPVLHIQPSLVALLGAGMLIVVSGLTRSEYLS-SVEWDTLLFFAGLFIMVGALVKTGVVN 299
Query: 435 WFSQTVVKFVGG 446
++ + GG
Sbjct: 300 DLARAATQLTGG 311
>sp|P0AFU2|YFBS_ECOLI Uncharacterized transporter YfbS OS=Escherichia coli (strain K12)
GN=yfbS PE=3 SV=1
Length = 610
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 144 LGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVK 203
+ AVAL + A L+ TLT FS F DP LIA F G ++TG+ + VK
Sbjct: 26 MDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVK 85
Query: 204 LFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ G+S + + L+ + A L + S A IF+P+V S+ +
Sbjct: 86 VAGNSEIKMLVLLMLTVAGLGAFMSSTGVVA--IFIPVVLSVAM 127
>sp|P0AFU3|YFBS_ECO57 Uncharacterized transporter YfbS OS=Escherichia coli O157:H7
GN=yfbS PE=3 SV=1
Length = 610
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 144 LGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVK 203
+ AVAL + A L+ TLT FS F DP LIA F G ++TG+ + VK
Sbjct: 26 MDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVK 85
Query: 204 LFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCL 247
+ G+S + + L+ + A L + S A IF+P+V S+ +
Sbjct: 86 VAGNSEIKMLVLLMLTVAGLGAFMSSTGVVA--IFIPVVLSVAM 127
>sp|Q6GFE0|SDCS_STAAR Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain MRSA252) GN=sdcS PE=3 SV=1
Length = 520
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 129/331 (38%), Gaps = 28/331 (8%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WVFGGRLNVD-PVTAAILGLSILLV----------------TGVVTWKECLAESVAWDTL 414
W+ L VT+++ +I + ++ W+ +A+ + W L
Sbjct: 311 WITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWE--VAKELPWGVL 368
Query: 415 TWFAALIAMAGYLNKYGLITWFSQTVVKFVG 445
F +A+A +++ GL W + + G
Sbjct: 369 ILFGGGLALAKGISESGLAKWLGEQLKSLNG 399
>sp|Q7A4P8|SDCS_STAAN Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain N315) GN=sdcS PE=1 SV=1
Length = 520
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WV 373
W+
Sbjct: 311 WI 312
>sp|Q99SX1|SDCS_STAAM Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1
Length = 520
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WV 373
W+
Sbjct: 311 WI 312
>sp|Q5HEK4|SDCS_STAAC Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain COL) GN=sdcS PE=3 SV=1
Length = 520
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WV 373
W+
Sbjct: 311 WI 312
>sp|Q2FWY4|SDCS_STAA8 Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1
Length = 520
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WV 373
W+
Sbjct: 311 WI 312
>sp|Q2FFH9|SDCS_STAA3 Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
aureus (strain USA300) GN=sdcS PE=3 SV=1
Length = 520
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 138 IAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRI 197
I + +P+ A +LL + L LT S +G+ I +L F A + L R+
Sbjct: 74 ITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRV 133
Query: 198 AYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLP----IVKSLCLACGSNT 253
A + L G+S+ + + + L+ + + +A I +P I+K +NT
Sbjct: 134 ALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVM--IMIPIGLAIIKEAHDLQEANT 191
Query: 254 GDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIV 313
+ K L+L I L + + I + W I
Sbjct: 192 NQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGYEISFAKWMIVGI- 250
Query: 314 PGLVSLIVVP--LLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGL 371
P ++ L+ + L Y+ + +K P L ++KL+++G M EK++ +L L
Sbjct: 251 PTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLL 310
Query: 372 WV 373
W+
Sbjct: 311 WI 312
>sp|O07187|Y2685_MYCTU Uncharacterized transporter Rv2685/MT2759 OS=Mycobacterium
tuberculosis GN=Rv2685 PE=3 SV=1
Length = 428
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 333 TVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTV-GLWVFGGRLNVDPVTAAILGLS 391
+V + PD E+ I G +L+ V ++ L++ P A+LG
Sbjct: 198 SVTAEPDRVADVLSLNEREAIHDRGLLIKCGVVLVLVFAAFIAHPVLHIQPSLVALLGAG 257
Query: 392 ILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGG 446
+L+ + + L+ SV WDTL +FA L M G L K G++ ++ + GG
Sbjct: 258 VLVRFSGLERSDYLS-SVEWDTLLFFAGLFVMVGALVKTGVVEQLARAATELTGG 311
>sp|Q49YW0|SDCS_STAS1 Sodium-dependent dicarboxylate transporter SdcS OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sdcS PE=3 SV=1
Length = 519
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 141/358 (39%), Gaps = 35/358 (9%)
Query: 116 PSGVSKNAWQLLAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIP 175
P +S +LAI L I + +P+ A +LL L + L + +G+ I
Sbjct: 51 PDNLSDKGVFVLAITLWIATWWITEAIPIAATSLLPLILLPVGHVLNPEEVSAQYGNDII 110
Query: 176 WLIALAFFFARGFIKTGLGNRIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAG 235
+L F A + L R+A + + G+S+ + + + L+ + + +A
Sbjct: 111 FLFLGGFILAIAMERWNLHTRVALRIINTLGTSTGRILLGFMIATGFLSMFVSNTAAVM- 169
Query: 236 GIFLPI----VKSLCLACGSNTGDGTEHKLGSWLMLTCFQTSVISSSMFLTAMAANPLSA 291
I +PI +K +T + K L+L I L +
Sbjct: 170 -IMIPIGLAIIKEANELKHGDTKPESISKFEQALVLAIGYAGTIGGLGTLIGTPPLIILK 228
Query: 292 TLTLNTINQPIGWMDWAKAAIVPGLVSLIVVPLLL-----YIIYPPTVKSSPDAPKLAQE 346
+ + I + W ++ G+ ++IV+ L+ YI + +K+ P L ++
Sbjct: 229 GQYQSAFGEEISFAKW----MIIGVPTVIVLLFLVWIYIRYIAFKHDMKTLPGGQDLIRK 284
Query: 347 KLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRL---------NVDPVTAAILGLSILLV-- 395
KL ++G M EK++ LL LW+ L D A + + + L+
Sbjct: 285 KLSELGKMKYEEKVVLIVFLLASFLWITREFLLKHWTFTSEVADGTIAMFISVLLFLIPA 344
Query: 396 ------TGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGL 447
++ W+ +A+ + W L F +A+A +++ GL W + +K + G+
Sbjct: 345 KNKEKHKRIIDWE--VAKDLPWGVLILFGGGLALAKGISESGLANWLGEQ-LKLIEGV 399
>sp|Q58086|Y672_METJA Uncharacterized transporter MJ0672 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0672 PE=3 SV=1
Length = 432
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 123/314 (39%), Gaps = 36/314 (11%)
Query: 141 PLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQ 200
PLP+ ++A+ + +V A + F PI +L F A+ L IAY+
Sbjct: 46 PLPVTSLAIPIM--AVFLGIFNLKEALTYFAHPIIFLFLGGFMLAQALKNHNLDKFIAYK 103
Query: 201 FVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPIVKSLCLACGSNTGDGTEHK 260
+ +G + + S L+ I + SA I LPI L TG K
Sbjct: 104 LLN-YGKDFKTTCFLMFLSAYFLSMWISNTSATL--ILLPIALGLL---HKKTG-----K 152
Query: 261 LGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTLNTINQPIGWMDWAKAAIVPGLVSLI 320
L +L+L ++ I + N ++++ G+ W K L+ +
Sbjct: 153 LRDFLLLGVAYSASIGGIATIIGSPPNAIASS------YLDYGFFSWFKVGFPISLLLFL 206
Query: 321 VVPLLLYIIYPPTVKSSPDAPKLAQEKLEKMGPMSTNEKIMAGTLLLTVGLWVFGGRL-- 378
+ L LYI + K P Q ++E +S N + +L LW+ L
Sbjct: 207 ICTLTLYIYFK---KWIPKEDIAIQARME----LSRNAYKLLVIFVLIASLWIISDYLSE 259
Query: 379 --NV---DPVTAAILGLSILLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLI 433
NV D V AI + +L V +V + + + W TL F + + G + K G
Sbjct: 260 IFNVQYFDSVI-AIFAIILLFVFNLVEVNDF--KKIDWGTLILFGGALCLGGVIVKSGAN 316
Query: 434 TWFSQTVVKFVGGL 447
T+ S+ ++ +G L
Sbjct: 317 TFLSEKLIAILGNL 330
>sp|Q39593|SAC1_CHLRE Putative sulfur deprivation response regulator OS=Chlamydomonas
reinhardtii GN=SAC1 PE=2 SV=1
Length = 585
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 127 LAIFLATIVGIIAQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFAR 186
L IF+A IV LPL AL+ L A ++T LT S +A I +A F A+
Sbjct: 395 LGIFIALIVLNSMDVLPLSTTALVCLFAYLITGVLTVSQCRAAIPSSILLTVAGGFGVAK 454
Query: 187 GFIKTGLGNRIAYQFVKLF 205
TGL +R+A + +F
Sbjct: 455 AMTVTGLAHRLAGSLLNVF 473
>sp|P46838|AG45_MYCLE 46 kDa membrane protein OS=Mycobacterium leprae (strain TN) GN=ag45
PE=3 SV=2
Length = 429
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 346 EKLEKMGPMSTNEKIMAGTLLLTVG---LWVFGG-----RLNVDPVTAAILGLSILLVTG 397
E++ + ++ E I LL+ G L VF L+ P +LG IL+V
Sbjct: 205 ERVADIMSLNEREAIRDRWLLIKCGVVLLLVFVAFIAHPVLHTGPSLVGMLGAGILIVIS 264
Query: 398 VVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGG 446
+ + L+ SV W+TL +FA L M G L K ++ ++ GG
Sbjct: 265 KLERSDYLS-SVKWETLLFFAGLFIMVGALVKTDVVNQLARATTTLTGG 312
>sp|Q5HRI3|ARSB_STAEQ Arsenical pump membrane protein OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=arsB PE=3 SV=1
Length = 430
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 354 MSTNEKIMAGTLLLTVGLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLAE-SVAWD 412
M+T I+ + LT+ +W G +D +AI+G ++++TGVV + + L + W+
Sbjct: 1 MTTVLAIVIFFITLTLIIWQPKG---LDIGISAIIGALLVIITGVVNFTDILEVIGIVWN 57
Query: 413 TLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASG 472
F ++I ++ L++ G W + +VK G GL ++ I+IL + +F G
Sbjct: 58 ATLTFVSVILISLILDEIGFFEWSAIHMVKASNGHGL--KMFIYIMILGALIAAFFANDG 115
Query: 473 AAHI 476
AA I
Sbjct: 116 AALI 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,901,822
Number of Sequences: 539616
Number of extensions: 8375084
Number of successful extensions: 36211
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 36053
Number of HSP's gapped (non-prelim): 110
length of query: 562
length of database: 191,569,459
effective HSP length: 123
effective length of query: 439
effective length of database: 125,196,691
effective search space: 54961347349
effective search space used: 54961347349
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)