Query 008541
Match_columns 562
No_of_seqs 198 out of 824
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 13:27:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 2E-186 5E-191 1538.6 51.0 559 1-562 222-785 (785)
2 PLN00149 potassium transporter 100.0 1E-185 2E-190 1534.9 52.0 553 1-562 223-779 (779)
3 PLN00150 potassium ion transpo 100.0 2E-183 4E-188 1514.4 50.4 540 1-562 239-779 (779)
4 PLN00151 potassium transporter 100.0 2E-183 4E-188 1514.8 50.0 547 1-562 299-852 (852)
5 TIGR00794 kup potassium uptake 100.0 1E-163 2E-168 1350.7 47.4 495 1-562 193-688 (688)
6 PRK10745 trkD potassium transp 100.0 8E-147 2E-151 1201.2 42.4 452 1-562 168-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 3E-139 6E-144 1132.6 30.3 378 1-381 157-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-133 5E-138 1072.6 39.6 454 1-561 173-626 (627)
9 PF06570 DUF1129: Protein of u 58.7 37 0.00079 33.6 7.5 20 256-275 179-198 (206)
10 PF14362 DUF4407: Domain of un 56.4 59 0.0013 33.8 8.9 83 199-281 16-111 (301)
11 KOG3643 GABA receptor [Signal 55.6 13 0.00027 41.5 3.9 91 151-245 225-325 (459)
12 COG4059 MtrE Tetrahydromethano 46.9 18 0.0004 37.0 3.2 39 243-281 242-286 (304)
13 TIGR03813 put_Glu_GABA_T putat 44.8 73 0.0016 35.0 7.8 50 51-100 199-250 (474)
14 TIGR00911 2A0308 L-type amino 43.4 80 0.0017 35.0 7.9 20 139-158 337-356 (501)
15 COG1230 CzcD Co/Zn/Cd efflux s 37.4 1.2E+02 0.0025 32.4 7.5 71 59-151 44-114 (296)
16 KOG4742 Predicted chitinase [G 35.9 17 0.00036 38.4 1.0 33 69-110 172-210 (286)
17 PRK10655 potE putrescine trans 29.1 3.1E+02 0.0067 29.6 9.4 17 142-158 295-311 (438)
18 TIGR03810 arg_ornith_anti argi 25.9 2.7E+02 0.0058 30.7 8.3 43 116-158 275-317 (468)
19 cd05900 Ig_Aggrecan Immunoglob 25.7 81 0.0018 28.4 3.5 28 356-383 74-101 (112)
20 TIGR00930 2a30 K-Cl cotranspor 25.4 4.7E+02 0.01 32.3 10.8 61 136-199 403-463 (953)
21 PRK10435 cadB lysine/cadaverin 24.8 4.5E+02 0.0098 28.6 9.8 66 142-213 293-363 (435)
22 TIGR00907 2A0304 amino acid pe 24.5 2E+02 0.0043 31.6 7.0 26 257-282 454-479 (482)
23 PRK11021 putative transporter; 23.7 5.9E+02 0.013 27.3 10.3 32 52-83 183-216 (410)
24 PF06155 DUF971: Protein of un 23.7 44 0.00096 28.6 1.4 15 531-545 25-39 (89)
25 PF05545 FixQ: Cbb3-type cytoc 23.4 68 0.0015 24.7 2.2 29 265-293 19-47 (49)
26 TIGR00909 2A0306 amino acid tr 22.9 2.7E+02 0.0059 29.8 7.5 106 52-158 201-317 (429)
27 COG2179 Predicted hydrolase of 22.5 19 0.0004 35.5 -1.3 69 484-557 45-117 (175)
28 PRK11049 D-alanine/D-serine/gl 22.2 3.8E+02 0.0083 29.5 8.7 107 51-158 216-333 (469)
29 PF13520 AA_permease_2: Amino 21.9 1.5E+02 0.0033 31.6 5.3 158 49-212 191-365 (426)
30 PF05297 Herpes_LMP1: Herpesvi 21.2 32 0.00069 36.6 0.0 60 220-282 126-190 (381)
31 TIGR00908 2A0305 ethanolamine 20.5 3.2E+02 0.007 29.5 7.6 21 138-158 295-315 (442)
32 PF05313 Pox_P21: Poxvirus P21 20.5 1.2E+02 0.0026 30.3 3.8 60 80-150 89-149 (189)
33 PF01545 Cation_efflux: Cation 20.4 8.8E+02 0.019 24.3 14.6 81 51-153 13-93 (284)
34 PRK13108 prolipoprotein diacyl 20.1 2.4E+02 0.0051 31.9 6.5 32 249-282 92-123 (460)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.4e-186 Score=1538.56 Aligned_cols=559 Identities=84% Similarity=1.386 Sum_probs=500.1
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+|
T Consensus 222 ~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iria 301 (785)
T PLN00148 222 MFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLA 301 (785)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEe
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||
T Consensus 302 w~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI 381 (785)
T PLN00148 302 FATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKV 381 (785)
T ss_pred eeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|++
T Consensus 382 vhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ 461 (785)
T PLN00148 382 VHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGF 461 (785)
T ss_pred EecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|++|||||+.||+||||+||++|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++.+|
T Consensus 462 ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~g 541 (785)
T PLN00148 462 IEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATG 541 (785)
T ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHH
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEF 400 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~f 400 (562)
+|++|.||++|+|++||++||+|||++|+|+||++|||+++|+++++||+|||++||||||.+++++|||++|+++|++|
T Consensus 542 vP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~F 621 (785)
T PLN00148 542 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEF 621 (785)
T ss_pred CCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred HhhhccCCcCC-CCCcccCCccceeeccccccCcccccccccccc--CCCccccccccccccccccccccCCc--ccccc
Q 008541 401 IQMEAEEPQFS-SSESSLDGRMAVISTRNVESNTNLIISVQEEDI--GSSSSIQSSKSLTLQSLQSVFDEDNP--VRRRQ 475 (562)
Q Consensus 401 I~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~ 475 (562)
||+|+.+.+.. ++.++.|++++++++.+...... ... ++++ .+.....++++...+..++.++.+.+ .++++
T Consensus 622 Ir~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (785)
T PLN00148 622 IQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSL-LMV--SEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRR 698 (785)
T ss_pred HHhhhhccccccccccccccccccccccccccccc-ccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 99998542100 00111244555554322111000 000 0000 00000001111112222222232222 35567
Q ss_pred ccccCCCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCeee
Q 008541 476 VRFQLPSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIE 555 (562)
Q Consensus 476 ~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lle 555 (562)
+++..+++.+.+++++||+++|++|||+||+||+||++||||++|+|+||++||++|+|||||||+|.+.|+|||++|||
T Consensus 699 ~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~Lle 778 (785)
T PLN00148 699 VRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIE 778 (785)
T ss_pred eeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEE
Confidence 78876655556789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEC
Q 008541 556 VGMIYYV 562 (562)
Q Consensus 556 VGm~y~v 562 (562)
|||+|||
T Consensus 779 VGM~Y~V 785 (785)
T PLN00148 779 VGMIYYV 785 (785)
T ss_pred cceEEEC
Confidence 9999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1e-185 Score=1534.86 Aligned_cols=553 Identities=57% Similarity=1.055 Sum_probs=495.9
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+|
T Consensus 223 ~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~a 302 (779)
T PLN00149 223 LFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIA 302 (779)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeee
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCc---cccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCc
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLD---KIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPR 157 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~---~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr 157 (562)
|+++|||||+|||+||||||++||+ +.+||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||
T Consensus 303 w~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPr 382 (779)
T PLN00149 303 FTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPK 382 (779)
T ss_pred ehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999996 5666999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 008541 158 VKVVHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLF 237 (562)
Q Consensus 158 ~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~ 237 (562)
+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+|||+++++++|+++
T Consensus 383 vkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~ 462 (779)
T PLN00149 383 VKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFF 462 (779)
T ss_pred ceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCC
Q 008541 238 FLAIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSEL 317 (562)
Q Consensus 238 f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~ 317 (562)
|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++
T Consensus 463 f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~ 542 (779)
T PLN00149 463 FGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTEL 542 (779)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred CCCchhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHH
Q 008541 318 ATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSI 397 (562)
Q Consensus 318 ~~~vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l 397 (562)
.+|+|++|.||++|+|++||++||+|||++|+|+||++|||+++|++++++|+|||++||||||..++++|||++|+++|
T Consensus 543 ~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L 622 (779)
T PLN00149 543 VSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSI 622 (779)
T ss_pred CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCCcC-CCCCcccCCccceeeccccccCccccccccccccCCCccccccccccccccccccccCCccccccc
Q 008541 398 AEFIQMEAEEPQF-SSSESSLDGRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQV 476 (562)
Q Consensus 398 ~~fI~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 476 (562)
++|||+|+.+.+. .++.+++|++++++++.+... +..... ++ .+ ....+++.++.++..+. + .+.+++++
T Consensus 623 ~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~--~~-~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 693 (779)
T PLN00149 623 AEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHL-EGIQLR--ED--DS-DKQEPAGTSELREIRSP-P--VSRPKKRV 693 (779)
T ss_pred HHHHHhhhhcccccccccccccccccccccccccc-cccccc--cc--cc-cccccccccccccccCc-c--ccCcccce
Confidence 9999999753211 111111245556554322111 000000 00 00 00000011111111111 1 11234677
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCeeee
Q 008541 477 RFQLPSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEV 556 (562)
Q Consensus 477 ~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lleV 556 (562)
++..+++.+.+++++||+++|++|||+||+||+||++||||++|+|+||++|||+|+|||||||+|.+.|+|||++||||
T Consensus 694 ~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleV 773 (779)
T PLN00149 694 RFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEV 773 (779)
T ss_pred eeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEe
Confidence 77776666667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEC
Q 008541 557 GMIYYV 562 (562)
Q Consensus 557 Gm~y~v 562 (562)
||+|||
T Consensus 774 GmvY~v 779 (779)
T PLN00149 774 GMVYHV 779 (779)
T ss_pred ceEEEC
Confidence 999997
No 3
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.9e-183 Score=1514.36 Aligned_cols=540 Identities=52% Similarity=0.977 Sum_probs=484.4
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++|||+||||+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+|
T Consensus 239 ~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iria 318 (779)
T PLN00150 239 LFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIA 318 (779)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeee
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||
T Consensus 319 w~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI 398 (779)
T PLN00150 319 FTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKI 398 (779)
T ss_pred ehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|++
T Consensus 399 ~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ 478 (779)
T PLN00150 399 VHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAI 478 (779)
T ss_pred EecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|++|||||+.||+||||+||++|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++|
T Consensus 479 ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~g 558 (779)
T PLN00150 479 IEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHG 558 (779)
T ss_pred HHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHH
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEF 400 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~f 400 (562)
+|++|.||++|+|++||++||+|||++|+|+||++|||+++|+++++|++|||++||||||..++++|||++|+++|++|
T Consensus 559 vP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~F 638 (779)
T PLN00150 559 VPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERF 638 (779)
T ss_pred CCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCcCCCCCcccCCccceeeccccccCccccccccccccCCCccccccccc-cccccccccccCCcccccccccc
Q 008541 401 IQMEAEEPQFSSSESSLDGRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSL-TLQSLQSVFDEDNPVRRRQVRFQ 479 (562)
Q Consensus 401 I~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~ 479 (562)
||+|+.+..... + ++++....+... . ++ ++.. ...+++.+ ...+.++.++.+.+. ++++++
T Consensus 639 Ir~e~~~~~~~~-----~-~~~~~~~~~~~~------~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 700 (779)
T PLN00150 639 IEIESFREQSDL-----E-SMAASWTPEELM------G--EG-NSVG-SGLFTQYDQSDINFATSQEWKRPS-SQEDSV- 700 (779)
T ss_pred HHhhhhcccccc-----c-cccccccccccc------c--cC-Cccc-cccccccccccccccccccccccc-cccccc-
Confidence 999975311100 0 111111110000 0 00 0000 00000000 000111111111111 122222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCeeeeeeE
Q 008541 480 LPSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMI 559 (562)
Q Consensus 480 ~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~ 559 (562)
++.+++++||+++|++|||+||+||+||++||||++|+|+||++||++|+|||||||+|.+.|+|||+||+||||+
T Consensus 701 ----~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmv 776 (779)
T PLN00150 701 ----SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMV 776 (779)
T ss_pred ----ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceE
Confidence 2235789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEC
Q 008541 560 YYV 562 (562)
Q Consensus 560 y~v 562 (562)
|||
T Consensus 777 Y~V 779 (779)
T PLN00150 777 YYV 779 (779)
T ss_pred EEC
Confidence 997
No 4
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=1.8e-183 Score=1514.81 Aligned_cols=547 Identities=44% Similarity=0.861 Sum_probs=484.0
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+|
T Consensus 299 ~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqia 378 (852)
T PLN00151 299 AFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLA 378 (852)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeee
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||+|||+|||++||++||||||+||
T Consensus 379 w~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkI 458 (852)
T PLN00151 379 FTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKI 458 (852)
T ss_pred ehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++++||||||+|||+||++|++||++||||++||||||+||++||++||||+++||+.+||||++++++|+++|++
T Consensus 459 vHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ 538 (852)
T PLN00151 459 IHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLS 538 (852)
T ss_pred EeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++++|
T Consensus 539 ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~g 618 (852)
T PLN00151 539 VELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKG 618 (852)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccC-CchhHHHHHHHHHHH
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQR-DDGDFENQLIQSIAE 399 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~-~~~~f~~~l~~~l~~ 399 (562)
+|++|.||++|+|++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.++ +++|||++|+++|++
T Consensus 619 vP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~ 698 (852)
T PLN00151 619 IPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEK 698 (852)
T ss_pred CCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999976 889999999999999
Q ss_pred HHhhhccCCcCCC--CCcccCC---ccceeeccccccCccccccccccccCCCcccccccccccc-ccccccccCCcccc
Q 008541 400 FIQMEAEEPQFSS--SESSLDG---RMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQ-SLQSVFDEDNPVRR 473 (562)
Q Consensus 400 fI~~e~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~ 473 (562)
|||+|+.+..... +.+.+++ +++...+.+... ....+ . ... ....+++...+ +..+. +.+.+. .
T Consensus 699 fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~--~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~ 768 (852)
T PLN00151 699 FIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGS--VYSLG---V--PLL-ADYRLTSKPIPEASTSE-EVSPVL-P 768 (852)
T ss_pred HHHhhhhhccccccccccccccccccccccccCCCcc--ccccc---c--ccc-ccccccccccccccccc-cccccc-c
Confidence 9999975321000 0000011 112111111000 00000 0 000 00000000000 00000 110100 1
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCe
Q 008541 474 RQVRFQLPSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISL 553 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~l 553 (562)
+++++ ++.+++++||+++|++|+|+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||++|
T Consensus 769 ~~~~~-----~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~l 843 (852)
T PLN00151 769 SSSMS-----SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNI 843 (852)
T ss_pred ccccc-----cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHe
Confidence 12222 2235789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEC
Q 008541 554 IEVGMIYYV 562 (562)
Q Consensus 554 leVGm~y~v 562 (562)
+||||+|||
T Consensus 844 leVGm~Y~v 852 (852)
T PLN00151 844 MQVGMTYMV 852 (852)
T ss_pred EEeceEEEC
Confidence 999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=9.9e-164 Score=1350.74 Aligned_cols=495 Identities=44% Similarity=0.865 Sum_probs=468.6
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++|||+||||+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||+|
T Consensus 193 ~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~a 272 (688)
T TIGR00794 193 TFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLA 272 (688)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceee
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||+++|||+||||||||+|||+||+++||++||||||+||
T Consensus 273 w~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I 352 (688)
T TIGR00794 273 WFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKI 352 (688)
T ss_pred hHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++++||||||+|||+||++|+++|++||||++||+|||+||++||+|||+|++++|+.+|||+++++++|+++|+.
T Consensus 353 ~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 432 (688)
T TIGR00794 353 IHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLS 432 (688)
T ss_pred EecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHh-cCCCCCCccccceEEEEeCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLG-LGPSLGIVRVPGIGLIYSELAT 319 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rvpG~~if~t~~~~ 319 (562)
+|+.|||||+.|++||||+||++|++++++|++|+||++++++++.++++|++++.+ +.++.++.|+||+|+|+|++++
T Consensus 433 id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~ 512 (688)
T TIGR00794 433 VELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVN 512 (688)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCcc
Confidence 999999999999999999999999999999999999999999999999999999977 5555556899999999999999
Q ss_pred CchhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHH
Q 008541 320 GVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAE 399 (562)
Q Consensus 320 ~vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~ 399 (562)
++|+++.||++|||++||++||+||+++|+|+||++|||+++++++++ |+|||++||||||+++.+++|+++++++|++
T Consensus 513 ~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~ 591 (688)
T TIGR00794 513 GIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVE 591 (688)
T ss_pred CCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999755 8999999999999999999999999999999
Q ss_pred HHhhhccCCcCCCCCcccCCccceeeccccccCccccccccccccCCCccccccccccccccccccccCCcccccccccc
Q 008541 400 FIQMEAEEPQFSSSESSLDGRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQ 479 (562)
Q Consensus 400 fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 479 (562)
||+++..+ +.. +. + .. + +. ++
T Consensus 592 fi~~~~~~-----~~~-------------------------~~--~---~~-----------~---~~---------~~- 612 (688)
T TIGR00794 592 FVEHECGF-----NLN-------------------------NL--E---EL-----------S---DK---------RC- 612 (688)
T ss_pred HHHHHhhh-----ccc-------------------------cc--c---cc-----------c---cc---------cc-
Confidence 99986431 000 00 0 00 0 00 00
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCeeeeeeE
Q 008541 480 LPSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMI 559 (562)
Q Consensus 480 ~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~ 559 (562)
+.+.+||++++++++|+||+|++||++++++++|+++||..||++|.|||||||++...++|||+|++||||.
T Consensus 613 -------~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~ 685 (688)
T TIGR00794 613 -------RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTV 685 (688)
T ss_pred -------ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeE
Confidence 0125799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEC
Q 008541 560 YYV 562 (562)
Q Consensus 560 y~v 562 (562)
||+
T Consensus 686 ~~i 688 (688)
T TIGR00794 686 VEI 688 (688)
T ss_pred EEC
Confidence 996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=7.5e-147 Score=1201.18 Aligned_cols=452 Identities=29% Similarity=0.566 Sum_probs=426.5
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||.+ ||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+|
T Consensus 168 ~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~a 246 (622)
T PRK10745 168 LFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLA 246 (622)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeee
Confidence 59999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||
T Consensus 247 W~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I 326 (622)
T PRK10745 247 WFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRI 326 (622)
T ss_pred ehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|++++++.+|||+++++++++++|+.
T Consensus 327 ~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 406 (622)
T PRK10745 327 IHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLC 406 (622)
T ss_pred EeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|+.||+||+.|++||||+|+++|++++++|++|++|++++++++.+++++++++.+..++.++.||||+|+|+|+..++
T Consensus 407 id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~ 486 (622)
T PRK10745 407 IDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINV 486 (622)
T ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998887777777999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHH
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEF 400 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~f 400 (562)
+|+++.|++|||+++||++||+||+++|+|+|+++||++++++++ |+|||++||||||+++.++.++ ..
T Consensus 487 vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~-----~~--- 555 (622)
T PRK10745 487 IPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFH-----RC--- 555 (622)
T ss_pred CCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHH-----HH---
Confidence 999999999999999999999999999999999999999999996 6999999999999977643331 11
Q ss_pred HhhhccCCcCCCCCcccCCccceeeccccccCccccccccccccCCCccccccccccccccccccccCCccccccccccC
Q 008541 401 IQMEAEEPQFSSSESSLDGRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQL 480 (562)
Q Consensus 401 I~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 480 (562)
+.+.. + ++
T Consensus 556 -~~~g~-----------------------------------~-----------------------------------~~- 563 (622)
T PRK10745 556 -GLEGL-----------------------------------S-----------------------------------CR- 563 (622)
T ss_pred -HhCCC-----------------------------------C-----------------------------------CC-
Confidence 00000 0 00
Q ss_pred CCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCc---hHHHHHHHHHHHHHhhhcCCCCcccccCCCCeeeee
Q 008541 481 PSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSS---FVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVG 557 (562)
Q Consensus 481 ~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~---~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lleVG 557 (562)
-..++|.+||+.+...++++ |-|| +|.||.||+++....+++|++|++|+|
T Consensus 564 ---------------------~~~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG 617 (622)
T PRK10745 564 ---------------------MMETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELG 617 (622)
T ss_pred ---------------------ccceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEe
Confidence 01578999999999888877 5555 699999999999999999999999999
Q ss_pred eEEEC
Q 008541 558 MIYYV 562 (562)
Q Consensus 558 m~y~v 562 (562)
+-+|+
T Consensus 618 ~~v~i 622 (622)
T PRK10745 618 TQVEI 622 (622)
T ss_pred eEEeC
Confidence 99885
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=3e-139 Score=1132.65 Aligned_cols=378 Identities=41% Similarity=0.853 Sum_probs=374.5
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||++||++|+|||++ +|+||+|+||+|+++||.+||+.||.+||+|+||+||+||||||||||||+|||+|
T Consensus 157 ~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~a 235 (534)
T PF02705_consen 157 LFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIA 235 (534)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhh
Confidence 59999999999999999999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||
T Consensus 236 w~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I 315 (534)
T PF02705_consen 236 WFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKI 315 (534)
T ss_pred HHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
+|||++.+||||||+|||+||++|++++++||||++||+|||+||++||++||+|++++++.+|||+++++++++++|+.
T Consensus 316 ~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~ 395 (534)
T PF02705_consen 316 VHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLV 395 (534)
T ss_pred EECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|+.||+||+.|++||||+|+++|++++++|++|++|++++++++++++++++++.++.++.++.|+||+|+|+|+..++
T Consensus 396 id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~ 475 (534)
T PF02705_consen 396 IDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDG 475 (534)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeec
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKD 381 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d 381 (562)
+|+++.|+++||+++||+++|++++++|+|+||++|||++++++++ |+|||++||||||
T Consensus 476 vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~~--g~~rv~~ryGf~e 534 (534)
T PF02705_consen 476 VPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGPD--GFYRVTLRYGFME 534 (534)
T ss_pred CcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecCC--CEEEEEEEecCCC
Confidence 9999999999999999999999999999999999999999999962 8999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-133 Score=1072.59 Aligned_cols=454 Identities=30% Similarity=0.637 Sum_probs=427.6
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcCCcceeeecChHHHHHHHHHcCcceeeeecchhhhhcchhhhhhccCCCcccceeee
Q 008541 1 MFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLA 80 (562)
Q Consensus 1 ~FgPImlvWf~~i~~~Giyni~~~~p~Vl~A~nP~ya~~ff~~~g~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~a 80 (562)
+|||||++||+++|..|++||.. ||+||+|+||+||++|+.++|..|++.||+||||+||+||||||||||||+|||.|
T Consensus 173 ~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~A 251 (627)
T COG3158 173 LFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVA 251 (627)
T ss_pred hhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHH
Confidence 59999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeE
Q 008541 81 FTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKV 160 (562)
Q Consensus 81 w~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki 160 (562)
|+++|+|||+|||+||||++++||++..||||.++|+|++||+++|||+||||||||+|||+||+++||++||++||+||
T Consensus 252 Wf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I 331 (627)
T COG3158 252 WFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRI 331 (627)
T ss_pred HHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 008541 161 VHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLA 240 (562)
Q Consensus 161 ~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ 240 (562)
.|||++..||||||.|||+|++++++++++||+|++||+|||+|||++|+|||+|++.+++..|||+++++.++.++|++
T Consensus 332 ~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~ 411 (627)
T COG3158 332 RHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLA 411 (627)
T ss_pred EecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCccHHHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCC
Q 008541 241 IEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATG 320 (562)
Q Consensus 241 ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~if~t~~~~~ 320 (562)
+|..||+||+.|++||||+|+++|++++++|.||++|+++.+++..++.+|+|.+.+...+.++.|||||++|+|+..+.
T Consensus 412 id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~ 491 (627)
T COG3158 412 IDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDV 491 (627)
T ss_pred HHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999998888888999999999999999999
Q ss_pred chhHHHHHHhhCcccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHH
Q 008541 321 VPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEF 400 (562)
Q Consensus 321 vP~~~~h~v~~~~~~h~~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~f 400 (562)
+|.++.|++|||+++||++||+++++.++|+|+++||++++++++ +++|++++|||||+|+.++.+ ..
T Consensus 492 vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l-----~~---- 559 (627)
T COG3158 492 VPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPRAL-----RL---- 559 (627)
T ss_pred CcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHHHH-----HH----
Confidence 999999999999999999999999999999999999999999998 599999999999999875433 11
Q ss_pred HhhhccCCcCCCCCcccCCccceeeccccccCccccccccccccCCCccccccccccccccccccccCCccccccccccC
Q 008541 401 IQMEAEEPQFSSSESSLDGRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQL 480 (562)
Q Consensus 401 I~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 480 (562)
++.+ | -+|++
T Consensus 560 ~~~~--------------G--------------------------------------------------------~~f~i 569 (627)
T COG3158 560 CRKK--------------G--------------------------------------------------------LKFDI 569 (627)
T ss_pred Hhhc--------------C--------------------------------------------------------ceecc
Confidence 1100 0 00000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCeeeeeeEE
Q 008541 481 PSDPGMDPAVREELMDLIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIY 560 (562)
Q Consensus 481 ~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~v~ar~~S~~lKK~vIn~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y 560 (562)
. ...|.+|++.+++++.|++.+- -+-.|.+|.||.-++...++||.+|++|+|---
T Consensus 570 m----------------------~tsFfl~re~l~~~~~~g~~~w--~~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqv 625 (627)
T COG3158 570 M----------------------ETSFFLSRESLIASKNSGMPRW--RDRLFIALARNAASPTDYFKLPPNRVVELGTQV 625 (627)
T ss_pred c----------------------ceEEEEEeeeeecCCCCCchHH--HHHHHHHHHHhcCCHHHhhCCCCCcEEEeeeee
Confidence 0 2468999999999999988653 235799999999999999999999999999544
Q ss_pred E
Q 008541 561 Y 561 (562)
Q Consensus 561 ~ 561 (562)
|
T Consensus 626 e 626 (627)
T COG3158 626 E 626 (627)
T ss_pred e
Confidence 4
No 9
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=58.72 E-value=37 Score=33.64 Aligned_cols=20 Identities=10% Similarity=0.439 Sum_probs=16.1
Q ss_pred CccHHHHHHHHHHHHHHHHh
Q 008541 256 GGWVPLVLSSVFMVVMYIWH 275 (562)
Q Consensus 256 GGW~pl~ia~~~~~iM~~W~ 275 (562)
.+|+-+++|++.+.+-+-|+
T Consensus 179 ~~~~~iiig~i~~~~~~~lk 198 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLK 198 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 38999999999888876654
No 10
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=56.35 E-value=59 Score=33.82 Aligned_cols=83 Identities=10% Similarity=0.089 Sum_probs=49.5
Q ss_pred hhhcceeeehHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH----HHHHHHHHHhhccccCCcc---------HHHHHHH
Q 008541 199 NAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFL----AIEGVYLSAAFIKVPQGGW---------VPLVLSS 265 (562)
Q Consensus 199 ~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~----~ie~~f~sa~l~Ki~~GGW---------~pl~ia~ 265 (562)
..||.+|..+.++.++-++..+..+.+.+++.++++.++++ .+|-..+|+.-.+-..+.. +.+++|.
T Consensus 16 ~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvliai 95 (301)
T PF14362_consen 16 AGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLIAI 95 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 46888888888888888888888888887666665555544 4565555543332221222 2334444
Q ss_pred HHHHHHHHHhHhHHHH
Q 008541 266 VFMVVMYIWHYGTRKK 281 (562)
Q Consensus 266 ~~~~iM~~W~~G~~~~ 281 (562)
++...+..+-+..+..
T Consensus 96 vIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 96 VISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444555555555443
No 11
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=55.64 E-value=13 Score=41.46 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=60.3
Q ss_pred HhCCCCceeEEecCCccCC----ceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehHHHHHHHHHHHHH-----
Q 008541 151 SLGCFPRVKVVHTSRHIYG----QIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIII----- 221 (562)
Q Consensus 151 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~----- 221 (562)
+.|-.||+-+...=++..| |+|+|.+= +..+.=|---=|-++-.+=-.++||.|..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3688999999998888888 99999851 1111112222355666667889999999999998764221
Q ss_pred HHHhhhhhHHHHHHHHHHH-HHHHH
Q 008541 222 FVWYKSIFLAGAFLLFFLA-IEGVY 245 (562)
Q Consensus 222 ~~w~~~~~~~~~~~~~f~~-ie~~f 245 (562)
.+.-.-+++.++|+.+|++ +|-++
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA~ 325 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYAA 325 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHHH
Confidence 2233445566777777776 45443
No 12
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=46.90 E-value=18 Score=36.99 Aligned_cols=39 Identities=31% Similarity=0.641 Sum_probs=31.1
Q ss_pred HHHHHHhhcccc------CCccHHHHHHHHHHHHHHHHhHhHHHH
Q 008541 243 GVYLSAAFIKVP------QGGWVPLVLSSVFMVVMYIWHYGTRKK 281 (562)
Q Consensus 243 ~~f~sa~l~Ki~------~GGW~pl~ia~~~~~iM~~W~~G~~~~ 281 (562)
.+|||+-..-+. +|||..++++.++..+..+|++--+.+
T Consensus 242 iVFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~ 286 (304)
T COG4059 242 IVFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVK 286 (304)
T ss_pred hhhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhh
Confidence 356666555555 899999999999999999999865554
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=44.76 E-value=73 Score=35.02 Aligned_cols=50 Identities=12% Similarity=0.089 Sum_probs=25.6
Q ss_pred eecchhhhhcchhhh--hhccCCCcccceeeehhhhhhhHHHhhhccchhhh
Q 008541 51 SLGGLLLCITGTEAM--FADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYL 100 (562)
Q Consensus 51 ~LG~V~L~iTG~EAL--yADlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l 100 (562)
..++++.+.+|-|.. +|+==+-.+|.+-.|=..-+.-+.++-.+++-+..
T Consensus 199 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~ 250 (474)
T TIGR03813 199 LAASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIA 250 (474)
T ss_pred HHHHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566788888853 44444455666665554433333333333333333
No 14
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=43.44 E-value=80 Score=34.99 Aligned_cols=20 Identities=10% Similarity=0.142 Sum_probs=11.9
Q ss_pred hhhhhhHHHHHHHhCCCCce
Q 008541 139 ITATFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 139 Isg~FSii~Qai~Lg~fPr~ 158 (562)
+.+.=-++...-+-|.+|+.
T Consensus 337 ~~~~sR~l~a~ardg~lP~~ 356 (501)
T TIGR00911 337 LFSSSRLFFVGGREGHLPSL 356 (501)
T ss_pred HHHHHHHHHHHHhcCCccHH
Confidence 33333444555578999973
No 15
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=37.38 E-value=1.2e+02 Score=32.42 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=50.0
Q ss_pred hcchhhhhhccCCCcccceeeehhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhh
Q 008541 59 ITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAI 138 (562)
Q Consensus 59 iTG~EALyADlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~ 138 (562)
.||+=||-||-+|+---.+ +|+++++ |-.+.+.|++..-+| ++ -=+-+|||.+..=.+
T Consensus 44 ~s~SlaLLADa~Hml~D~~----------al~lal~--A~~~a~r~~~~~~Tf-----Gy-----~R~eiLaa~~nav~L 101 (296)
T COG1230 44 LTGSLALLADALHMLSDAL----------ALLLALI--AIKLARRPATKRFTF-----GY-----KRLEILAAFLNALLL 101 (296)
T ss_pred HhccHHHHHhHHHHHHHHH----------HHHHHHH--HHHHhcCCCCCCCCc-----cH-----hHHHHHHHHHHHHHH
Confidence 5899999999999877654 3444443 224556666554444 11 124677888888899
Q ss_pred hhhhhhHHHHHHH
Q 008541 139 ITATFSIVKQCHS 151 (562)
Q Consensus 139 Isg~FSii~Qai~ 151 (562)
|..++.++.||++
T Consensus 102 i~~s~~I~~EAi~ 114 (296)
T COG1230 102 IVVSLLILWEAIQ 114 (296)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999997
No 16
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=35.94 E-value=17 Score=38.43 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=24.9
Q ss_pred cCCCcccceeeehhhhhhhHHHhhhccchh-----hhccCCcccc-Cc
Q 008541 69 LGHFTALSIRLAFTFFVYPCLVVQYMGQAA-----YLSKNLDKIP-NS 110 (562)
Q Consensus 69 lGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA-----~l~~~p~~~~-np 110 (562)
=+++||.+|||+|-. ..||+. =||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 469999999999988 445543 4788998765 44
No 17
>PRK10655 potE putrescine transporter; Provisional
Probab=29.13 E-value=3.1e+02 Score=29.65 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=11.8
Q ss_pred hhhHHHHHHHhCCCCce
Q 008541 142 TFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 142 ~FSii~Qai~Lg~fPr~ 158 (562)
+=-+...+-+-|.+|+.
T Consensus 295 ~sR~~~~~a~dg~lP~~ 311 (438)
T PRK10655 295 IAQVFKSSADEGYFPKI 311 (438)
T ss_pred HHHHHHHHhcCCchhHH
Confidence 33456666688999975
No 18
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=25.90 E-value=2.7e+02 Score=30.65 Aligned_cols=43 Identities=7% Similarity=-0.188 Sum_probs=28.3
Q ss_pred cCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCce
Q 008541 116 PEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 116 P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ 158 (562)
.++..+.+.+.+.++.+-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 275 g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 275 GTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 4455555555555555656666666666667777788999965
No 19
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=25.72 E-value=81 Score=28.38 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=22.6
Q ss_pred ceEEEEEecCCCCcEEEEEEEEeeeccc
Q 008541 356 ERFLIGRVCPRPYRMYRCIVRYGYKDVQ 383 (562)
Q Consensus 356 eR~~v~~~~~~~~~~~r~~~ryGy~d~~ 383 (562)
--..+..+...+.|.|+|.+.+|.-|..
T Consensus 74 asL~I~nl~~sDsG~Y~C~V~~g~~~~~ 101 (112)
T cd05900 74 ATLEITELRSNDSGTYRCEVMHGIEDNY 101 (112)
T ss_pred cEEEEeecccccCEEEEEEEecCCCCce
Confidence 3456777778888999999999988764
No 20
>TIGR00930 2a30 K-Cl cotransporter.
Probab=25.37 E-value=4.7e+02 Score=32.25 Aligned_cols=61 Identities=13% Similarity=0.112 Sum_probs=29.7
Q ss_pred hhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHHHhheeEEecCchhhhh
Q 008541 136 QAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMILTLAITIGFQDTTLIGN 199 (562)
Q Consensus 136 QA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~ 199 (562)
-+.+.|+=-++...-+-|.+|..+..- +.+++==.|..-.++..+..++.+.+.+-+.++.
T Consensus 403 la~l~~asRvl~AmArDg~lP~l~~fa---kv~~k~~tP~~Alllt~iIa~l~ili~~l~~ia~ 463 (953)
T TIGR00930 403 LASLVSAPRLFQALCKDNIYPFLQFFG---KGYGKNGEPLRAYLLTAFIAEGFILIAELNTIAP 463 (953)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcchhhc---ccCCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 344555555555566778999643321 1122222566555554443333334445455544
No 21
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=24.81 E-value=4.5e+02 Score=28.55 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=32.7
Q ss_pred hhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHHHh---heeEEe--cCchhhhhhhcceeeehHHHHH
Q 008541 142 TFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMILTL---AITIGF--QDTTLIGNAYGLACMTVMFITT 213 (562)
Q Consensus 142 ~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i---~v~~~F--~~s~~l~~AYGiaV~~~M~iTT 213 (562)
.-....++-+-|.+|+. .-+++| +| .|..-.++...+. ..++.| ..++...++|..-++.+.+.+-
T Consensus 293 ~~r~~~~~ardG~lP~~-f~k~nk--~g---~P~~Al~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 363 (435)
T PRK10435 293 VGQAGVRAANDGNFPKV-YGEVDK--NG---IPKKGLLLAAVKMTALMILITLMNSSGGKASDLFGELTGIAVLLTM 363 (435)
T ss_pred HHHHHHHHHhCCCccHH-HHhhCc--CC---CCHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 33455566788999975 122232 23 7876654432111 111111 2223456778765555555444
No 22
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=24.55 E-value=2e+02 Score=31.65 Aligned_cols=26 Identities=23% Similarity=0.691 Sum_probs=18.7
Q ss_pred ccHHHHHHHHHHHHHHHHhHhHHHHH
Q 008541 257 GWVPLVLSSVFMVVMYIWHYGTRKKY 282 (562)
Q Consensus 257 GW~pl~ia~~~~~iM~~W~~G~~~~~ 282 (562)
-|.+++++++++..+..|....+|.+
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~~ 479 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKEF 479 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceeec
Confidence 59999998888888888865434433
No 23
>PRK11021 putative transporter; Provisional
Probab=23.75 E-value=5.9e+02 Score=27.28 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=19.4
Q ss_pred ecchhhhhcchhhh--hhccCCCcccceeeehhh
Q 008541 52 LGGLLLCITGTEAM--FADLGHFTALSIRLAFTF 83 (562)
Q Consensus 52 LG~V~L~iTG~EAL--yADlGHFg~~~I~~aw~~ 83 (562)
+...+.+.+|-|+. +|+==+-.+|.+..|=..
T Consensus 183 ~~~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~ 216 (410)
T PRK11021 183 LGVMFWCFVGIEAFAHLASEFKNPERDFPRALMI 216 (410)
T ss_pred HHHHHHHHhcHHHHHhhHHhccCccccccHHHHH
Confidence 34456778888865 444445566777665544
No 24
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=23.73 E-value=44 Score=28.61 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=10.9
Q ss_pred HHHHHhhhcCCCCcc
Q 008541 531 LYSFLRKNCRGPSVA 545 (562)
Q Consensus 531 ~Y~FLRkNcR~~~~~ 545 (562)
=|.|||+|||.+.-.
T Consensus 25 ~~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 25 PYEWLRDNCPCAECR 39 (89)
T ss_dssp EHHHHHHT-SSSSTC
T ss_pred CHHHHhccCCChhhc
Confidence 379999999987643
No 25
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=23.38 E-value=68 Score=24.68 Aligned_cols=29 Identities=31% Similarity=0.622 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhHhHHHHHhhhhccCCChH
Q 008541 265 SVFMVVMYIWHYGTRKKYNFDLHNKVSLR 293 (562)
Q Consensus 265 ~~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 293 (562)
++++.....|.|-+++|.++|...+++++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 33444445566655555555555555543
No 26
>TIGR00909 2A0306 amino acid transporter.
Probab=22.88 E-value=2.7e+02 Score=29.83 Aligned_cols=106 Identities=15% Similarity=-0.016 Sum_probs=48.2
Q ss_pred ecchhhhhcchhhhhh--ccCCCcccceeeehhhhhhhHHHhhhccchhhhccC-C-c---cccCcce----eeccCcch
Q 008541 52 LGGLLLCITGTEAMFA--DLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN-L-D---KIPNSFY----DSIPEPVF 120 (562)
Q Consensus 52 LG~V~L~iTG~EALyA--DlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l~~~-p-~---~~~npFf----~~~P~~~~ 120 (562)
+...+.+.+|-|+.-. +-=+-.+|.+.+|-..-+.-+ .+.|+.-....... | + +.++|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 3345667778887643 333445567776654322222 22244333222211 1 1 1223432 22223333
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCce
Q 008541 121 WPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 121 ~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ 158 (562)
+-+.+.+.++..-+..+.+.+.=-++...-+.|.+|+.
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 33444444444444444444444444445578999973
No 27
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=22.46 E-value=19 Score=35.49 Aligned_cols=69 Identities=25% Similarity=0.423 Sum_probs=49.8
Q ss_pred CCCChhHHHHHHHHHHHHHcCcE-EEeeceEEEecCCCchHHHHHHHHHHHHH---hhhcCCCCcccccCCCCeeeee
Q 008541 484 PGMDPAVREELMDLIQAKEAGIA-YIMGHSYVKARRSSSFVKRFMIDILYSFL---RKNCRGPSVALNIPHISLIEVG 557 (562)
Q Consensus 484 ~~~~~~v~eEl~~L~~A~e~GVv-YIlG~~~v~ar~~S~~lKK~vIn~~Y~FL---RkNcR~~~~~L~IP~~~lleVG 557 (562)
++.+|++++-++ +++++|+- +|..+ .+.++=..+..|+=+|++|.-. +++.|.....+++|.++.+-||
T Consensus 45 ~~~tpe~~~W~~---e~k~~gi~v~vvSN--n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 45 PDATPELRAWLA---ELKEAGIKVVVVSN--NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CCCCHHHHHHHH---HHHhcCCEEEEEeC--CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 344465555554 46677874 44444 6666667788899999877653 5778888899999999999988
No 28
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=22.17 E-value=3.8e+02 Score=29.46 Aligned_cols=107 Identities=12% Similarity=0.046 Sum_probs=49.1
Q ss_pred eecchhhhhcchhhh--hhccCCCcccceeeehhhhhhhHHHhhhccchhhhcc--CCcc---ccCcceeec----cCcc
Q 008541 51 SLGGLLLCITGTEAM--FADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSK--NLDK---IPNSFYDSI----PEPV 119 (562)
Q Consensus 51 ~LG~V~L~iTG~EAL--yADlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l~~--~p~~---~~npFf~~~----P~~~ 119 (562)
.+..++.+.+|-|+. .|.==+-.+|+|..|-.. +.-...+.|+-....+.. .+++ .++||-... -++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 344456677788864 344345566666666532 222333444433332221 2222 235552211 1122
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCce
Q 008541 120 FWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 120 ~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ 158 (562)
..-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 222233333333434444444444455555578999964
No 29
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=21.87 E-value=1.5e+02 Score=31.57 Aligned_cols=158 Identities=14% Similarity=0.137 Sum_probs=86.3
Q ss_pred eeeecchhhhhcchhhhhhccCCCcccceeeehhhhhhhHHHhhhccchhhhccCCcc----ccC------cceeec-cC
Q 008541 49 WISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLDK----IPN------SFYDSI-PE 117 (562)
Q Consensus 49 ~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l~~~p~~----~~n------pFf~~~-P~ 117 (562)
+..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-++...-|++ .+| .+++.. .+
T Consensus 191 ~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (426)
T PF13520_consen 191 LAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGGS 270 (426)
T ss_dssp HHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCC
T ss_pred hhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhcccccc
Confidence 3456678888999998665555555566655543323333333223333333332221 112 223332 45
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHHHh-hee--EEe---
Q 008541 118 PVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMILTL-AIT--IGF--- 191 (562)
Q Consensus 118 ~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i-~v~--~~F--- 191 (562)
+..+.+.+++.++.+-+-.+.+.+.--++.+.-+-|.+|+ +..+++| +| .|..-.+++.... ++. ..|
T Consensus 271 ~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~ 344 (426)
T PF13520_consen 271 WLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLFIPQ 344 (426)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred ccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHhhhH
Confidence 7788888888887777777777777777777788899994 2223321 22 2655544444333 222 223
Q ss_pred cCchhhhhhhcceeeehHHHH
Q 008541 192 QDTTLIGNAYGLACMTVMFIT 212 (562)
Q Consensus 192 ~~s~~l~~AYGiaV~~~M~iT 212 (562)
++-+.+.+.+.+......+++
T Consensus 345 ~~~~~l~~~~~~~~~~~~~~~ 365 (426)
T PF13520_consen 345 SSFDILVSLSSVGYLISYILV 365 (426)
T ss_dssp SHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 233566666666665555555
No 30
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.23 E-value=32 Score=36.63 Aligned_cols=60 Identities=18% Similarity=0.416 Sum_probs=0.0
Q ss_pred HHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhhccccCCccHHHHHHH---HHHHHHHHHhHhHHHHH
Q 008541 220 IIFVWY--KSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVLSS---VFMVVMYIWHYGTRKKY 282 (562)
Q Consensus 220 ~~~~w~--~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~---~~~~iM~~W~~G~~~~~ 282 (562)
|.+.|+ -++|-.+.|++.|+.-=++...|.+. +=.||++++-. ++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 334444 47777788888776654555555554 57899998754 56777789998877664
No 31
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=20.54 E-value=3.2e+02 Score=29.54 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=13.3
Q ss_pred hhhhhhhHHHHHHHhCCCCce
Q 008541 138 IITATFSIVKQCHSLGCFPRV 158 (562)
Q Consensus 138 ~Isg~FSii~Qai~Lg~fPr~ 158 (562)
.+.++--++...-+-|.+||.
T Consensus 295 ~~~~~sR~l~a~ardg~lP~~ 315 (442)
T TIGR00908 295 IIYGYSRQIFALSRAGYLPES 315 (442)
T ss_pred HHHHHHHHHHHHHhcCCccHH
Confidence 344444555555678999975
No 32
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=20.50 E-value=1.2e+02 Score=30.28 Aligned_cols=60 Identities=17% Similarity=0.163 Sum_probs=37.9
Q ss_pred ehhhhhhhHHHhhhccchhhh-ccCCccccCcceeeccCcchhHHHHHHHHHHHhhhhhhhhhhhhHHHHHH
Q 008541 80 AFTFFVYPCLVVQYMGQAAYL-SKNLDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCH 150 (562)
Q Consensus 80 aw~~~V~P~LlL~Y~GQaA~l-~~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai 150 (562)
|=+.+=+|||+++|+ +.+ +.||.+..|. .+-+--++.|+..=++-||+ +|-+|+++..-+
T Consensus 89 As~llP~PsLVIaYC---l~mqi~~~~~~~~~-------gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 89 ASLLLPFPSLVIAYC---LSMQIYNPGANNNV-------GMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHcCccHHHHHHH---HHheeecCCCccee-------hhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 334556899999998 333 5577765442 34444555555555667787 777777766544
No 33
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=20.37 E-value=8.8e+02 Score=24.33 Aligned_cols=81 Identities=20% Similarity=0.122 Sum_probs=43.6
Q ss_pred eecchhhhhcchhhhhhccCCCcccceeeehhhhhhhHHHhhhccchhhhccCCccccCcceeeccCcchhHHHHHHHHH
Q 008541 51 SLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLDKIPNSFYDSIPEPVFWPVFVVATLS 130 (562)
Q Consensus 51 ~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~LlL~Y~GQaA~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlA 130 (562)
..+.+.--+||.-||+||--|--.-.+ .+++.++ +.++.+.|.+..+|| +.-. +-+++
T Consensus 13 ~~~~~~~~~t~S~al~~d~~~sl~d~~----------~~~~~l~--~~~~~~~~~~~~~pf-----G~~r-----~e~l~ 70 (284)
T PF01545_consen 13 VVKIIAGIITGSLALLADGLHSLADAI----------SLLISLF--ALRIASKPPDKRYPF-----GYGR-----LEPLA 70 (284)
T ss_dssp HCTTCSS-SSSSS---SCCCHHHHHHH----------HHHHHHH--HHHHHTSS-SSSSSS-----SSTT-----HHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH----------HHHHHHH--HHHHhhccCcccccc-----chhh-----hhhHh
Confidence 445555667899999999988643332 2222333 235556788888887 1111 23344
Q ss_pred HHhhhhhhhhhhhhHHHHHHHhC
Q 008541 131 AIVGSQAIITATFSIVKQCHSLG 153 (562)
Q Consensus 131 aIIASQA~Isg~FSii~Qai~Lg 153 (562)
+.+.|=.++.++++++.++++--
T Consensus 71 ~~~~~~~l~~~~~~~~~~si~~~ 93 (284)
T PF01545_consen 71 ALIVSILLIFLGLFLIVESIQRL 93 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS
T ss_pred hhhhhhhHhhhHHHHHHHHhhcc
Confidence 55555556667777777776543
No 34
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.10 E-value=2.4e+02 Score=31.94 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=18.0
Q ss_pred hhccccCCccHHHHHHHHHHHHHHHHhHhHHHHH
Q 008541 249 AFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKY 282 (562)
Q Consensus 249 ~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~ 282 (562)
.+.||-+||-- .-++++..++..|-|.++++.
T Consensus 92 ~il~iw~GGLs--i~GGlIGg~l~~~~y~r~~ki 123 (460)
T PRK13108 92 AALRIWDGGLG--IWGAVTLGVMGAWIGCRRCGI 123 (460)
T ss_pred HHHhhccCCch--HHHHHHHHHHHHHHHHHHhCC
Confidence 45577788752 334455555556666655444
Done!