Citrus Sinensis ID: 008547
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XJR9 | 571 | Calcium-dependent protein | yes | no | 0.992 | 0.977 | 0.773 | 0.0 | |
| Q9FKW4 | 523 | Calcium-dependent protein | no | no | 0.930 | 1.0 | 0.757 | 0.0 | |
| Q1PE17 | 534 | Calcium-dependent protein | no | no | 0.950 | 1.0 | 0.731 | 0.0 | |
| Q9SCS2 | 601 | CDPK-related kinase 5 OS= | no | no | 0.957 | 0.895 | 0.449 | 1e-127 | |
| P53681 | 602 | CDPK-related protein kina | N/A | no | 0.814 | 0.760 | 0.511 | 1e-126 | |
| Q9FX86 | 606 | CDPK-related kinase 8 OS= | no | no | 0.900 | 0.834 | 0.464 | 1e-125 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.779 | 0.829 | 0.480 | 1e-124 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.861 | 0.873 | 0.452 | 1e-124 | |
| Q38870 | 646 | Calcium-dependent protein | no | no | 0.790 | 0.687 | 0.485 | 1e-123 | |
| Q3E9C0 | 523 | Calcium-dependent protein | no | no | 0.800 | 0.860 | 0.467 | 1e-123 |
| >sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/575 (77%), Positives = 478/575 (83%), Gaps = 17/575 (2%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARN------DTTHKHQHQHQ 54
MG+C S+ + +SG N ++ N H + K R + H+ Q +
Sbjct: 1 MGLCFSS---AAKSSGHNRSSRNPHPHPPLTVVKSRPPRSPCSFMAVTIQKDHRTQPRRN 57
Query: 55 ERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
AK T H K N RR IP GKR DFGY KDFD RYTIGKLLGHG
Sbjct: 58 ATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYTIGKLLGHG 117
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167
QFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREVKILQAL GHENVV+FYNAFE
Sbjct: 118 QFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENVVRFYNAFE 177
Query: 168 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 227
D N VYI MELCEGGELLDRILA+KDSRY+E+DAAVVVRQML+VAAECHL GLVHRDMKP
Sbjct: 178 DKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRGLVHRDMKP 237
Query: 228 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIG 287
ENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKR+SGPESDVWSIG
Sbjct: 238 ENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGPESDVWSIG 297
Query: 288 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 347
VI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARL
Sbjct: 298 VISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARL 357
Query: 348 TAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLR 407
TAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALRALA+TLD+EELADLR
Sbjct: 358 TAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLR 417
Query: 408 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 467
DQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV EILQAID NTDG VDF EFVAA
Sbjct: 418 DQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAAA 477
Query: 468 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKD 527
LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EELRMHTGLKGSI+PLLEEADID D
Sbjct: 478 LHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSIEPLLEEADIDND 537
Query: 528 GRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 562
G+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 538 GKISLQEFRRLLRTASIKSRNV-RSPPGYLISRKV 571
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/560 (75%), Positives = 481/560 (85%), Gaps = 37/560 (6%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +V+G++S R +++ ++K
Sbjct: 1 MGVCFSAIRVTGASSS---------RRSSQTKSK-------------------------- 25
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
T K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + N
Sbjct: 26 -AAPTPIDTKASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPN 84
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVK+++K+KM+LPIAVEDVKREV+IL AL+GHENVV+F+NAFEDD+YVYI MELCE
Sbjct: 85 GDRVAVKRLDKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVMELCE 144
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
GGELLDRIL+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKSA+ DS
Sbjct: 145 GGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSAQLDSP 204
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 300
LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPF
Sbjct: 205 LKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPF 264
Query: 301 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
WD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALSH WVRE
Sbjct: 265 WDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSHAWVRE 324
Query: 361 GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGS 420
GG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAIDVDKNG
Sbjct: 325 GGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDVDKNGV 384
Query: 421 ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480
ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLEEHDSEK
Sbjct: 385 ISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEK 444
Query: 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
W LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL EFRRLLR
Sbjct: 445 WQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEFRRLLR 504
Query: 541 TASISSRNVPPSPSGHRNPR 560
TASISS+ PSP+GHRN R
Sbjct: 505 TASISSQRA-PSPAGHRNLR 523
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PE17|CDPKI_ARATH Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/562 (73%), Positives = 460/562 (81%), Gaps = 28/562 (4%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S+ K + +GS N N + E N +HQ
Sbjct: 1 MGLCFSSPKATRRGTGSRNPNPDSPTQGKASEKVSNKNKKNTKKIQLRHQ---------- 50
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
G IP GKR DFGY KDFD RYTIGKLLGHGQFG+TYVATD N
Sbjct: 51 -----------------GGIPYGKRIDFGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNN 93
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
G+RVAVK+I+K KM PI VEDVKREVKILQAL GHENVV F+NAFED Y+YI MELC+
Sbjct: 94 GNRVAVKRIDKAKMTQPIEVEDVKREVKILQALGGHENVVGFHNAFEDKTYIYIVMELCD 153
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
GGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHL GLVHRDMKPENFLFKS +E SS
Sbjct: 154 GGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKSTEEGSS 213
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 300
LKATDFGLSDFIKPG KFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPF
Sbjct: 214 LKATDFGLSDFIKPGVKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPF 273
Query: 301 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
WDKT+DGIF EV+R KPDFR PWP+ISN AKDFVKKLLVK+PRARLTAAQALSH WV+E
Sbjct: 274 WDKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRARLTAAQALSHSWVKE 333
Query: 361 GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGS 420
GG+ASE+PIDISVLNNMRQFVK+SRLKQ ALRALA T++++EL DLRDQFDAID+DKNGS
Sbjct: 334 GGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDLRDQFDAIDIDKNGS 393
Query: 421 ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480
ISLEEMRQALAKD+PWKLK++RV EILQA D NTDGLVDF+EFV A LHV+QLEEHDSEK
Sbjct: 394 ISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAALHVNQLEEHDSEK 453
Query: 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
W RS+AAF+KFDID DGFITPEELR+ TGLKGSI+PLLEEAD+D+DGRIS++EFRRLLR
Sbjct: 454 WQQRSRAAFDKFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVDEDGRISINEFRRLLR 513
Query: 541 TASISSRNVPPSPSGHRNPRKL 562
+AS+ S+NV SP G++ +K+
Sbjct: 514 SASLKSKNV-KSPPGYQLSQKM 534
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SCS2|CAMK5_ARATH CDPK-related kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/565 (44%), Positives = 348/565 (61%), Gaps = 27/565 (4%)
Query: 4 CLSTTKVSGSNSG--SNNNNANHHRNANKEEAKRRHNHHARNDTT---HKHQHQHQERAK 58
C++TT G S + + H +K+ R ++ N T K AK
Sbjct: 42 CVTTTNNEGKKSPFFPFYSPSPAHYFFSKKTPARSPATNSTNSTPKRFFKRPFPPPSPAK 101
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTD---------FGYDKDFDRRYTIGKLLGHGQF 109
+ + + ++H + + IP G + FG+ K F +Y +G +G G F
Sbjct: 102 HIRAVLARRHGSV--KPNSSAIPEGSEAEGGGVGLDKSFGFSKSFASKYELGDEVGRGHF 159
Query: 110 GYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
GYT A K G +VAVK I K KM IA+EDV+REVKIL+AL+GH N+ FY+A+
Sbjct: 160 GYTCAAKFKKGDNKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALSGHNNLPHFYDAY 219
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
ED + VYI MELCEGGELLDRIL++ +YTE+DA V+ Q+L V A CHL G+VHRD+K
Sbjct: 220 EDHDNVYIVMELCEGGELLDRILSR-GGKYTEEDAKTVMIQILNVVAFCHLQGVVHRDLK 278
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSI 286
PENFLF S ++ S LKA DFGLSD+++P ++ DIVGSAYYVAPEVL R E+D+WS+
Sbjct: 279 PENFLFTSKEDTSQLKAIDFGLSDYVRPDERLNDIVGSAYYVAPEVLHRSYSTEADIWSV 338
Query: 287 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 346
GVI YILLCG RPFW +TE GIF+ VL+ P F PWP +S+ A+DFVK+LL KDPR R
Sbjct: 339 GVIVYILLCGSRPFWARTESGIFRAVLKADPSFDDPPWPLLSSEARDFVKRLLNKDPRKR 398
Query: 347 LTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADL 406
LTAAQALSHPW+++ DA ++P+DI V MR +++ S L++ ALRAL+ TL +EL L
Sbjct: 399 LTAAQALSHPWIKDSNDA-KVPMDILVFKLMRAYLRSSSLRKAALRALSKTLTVDELFYL 457
Query: 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466
R+QF ++ KNG+ISLE ++ AL K +K+SR+ E L + +DF EF AA
Sbjct: 458 REQFALLEPSKNGTISLENIKSALMKMATDAMKDSRIPEFLGQLSALQYRRMDFEEFCAA 517
Query: 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID--PLLEEADI 524
L VHQLE D +W ++ A+E F+ + + I +EL GL S+ +L +
Sbjct: 518 ALSVHQLEALD--RWEQHARCAYELFEKEGNRPIMIDELASELGLGPSVPVHAVLHDWLR 575
Query: 525 DKDGRISLSEFRRLLRTASISSRNV 549
DG++S F +LL +SSR +
Sbjct: 576 HTDGKLSFLGFVKLLH--GVSSRTI 598
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53681|CRK_DAUCA CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/467 (51%), Positives = 314/467 (67%), Gaps = 9/467 (1%)
Query: 82 CGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPI 138
G FG+ K F ++ +G+ +G G FGYT A K G VAVK I K KM I
Sbjct: 132 AGLDKSFGFSKKFGSKFEVGEEVGRGHFGYTCRAKFKKGEFKGQDVAVKVIPKAKMTTAI 191
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
A+EDV+REVKIL+AL GH N+V+FY+AFED VY+ MELCEGGELLDRIL++ +YTE
Sbjct: 192 AIEDVRREVKILRALTGHNNLVQFYDAFEDHTNVYVVMELCEGGELLDRILSR-GGKYTE 250
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
DA V+ Q+L V A CHL G+VHRD+KPENFLFKS EDS LKA DFGLSD++KP ++
Sbjct: 251 DDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFKSKDEDSQLKAIDFGLSDYVKPDERL 310
Query: 259 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
DIVGSAYYVAPEVL R E+DVWSIGVI+YILLCG RPFW +TE GIF+ VL+
Sbjct: 311 NDIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTESGIFRAVLKANLS 370
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 378
F PWPS+S+ AKDFVK+LL KDPR R+TAAQAL H W++ D + P+DI V M+
Sbjct: 371 FDEPPWPSVSSEAKDFVKRLLNKDPRKRMTAAQALCHSWIKNSNDI-KFPLDILVFKLMK 429
Query: 379 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL 438
+++ S L++ ALRAL+ TL +EL L++QF ++ KNG+ISLE ++QAL ++ +
Sbjct: 430 VYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISLENIKQALMRNSTDAM 489
Query: 439 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDG 498
K+SRVL++L +++ +DF EF AA L VHQLE D +W ++ A++ F+ D +
Sbjct: 490 KDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALD--RWEQHARCAYDLFEKDGNR 547
Query: 499 FITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTAS 543
I EEL GL SI +L + DG++S + +LL S
Sbjct: 548 AIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHGVS 594
|
Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FX86|CAMK8_ARATH CDPK-related kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/514 (46%), Positives = 320/514 (62%), Gaps = 8/514 (1%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
R H + H + + K L T ++ G FG+ K+F
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKRFGFSKEFH 147
Query: 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
R +G+ +G G FGYT A K G VAVK I K+KM IA+EDV+REVKILQA
Sbjct: 148 SRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSKMTTAIAIEDVRREVKILQA 207
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +Y+E DA V+ Q+L V
Sbjct: 208 LSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR-GGKYSENDAKPVIIQILNVV 266
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P ++ DIVGSAYYVAPEV
Sbjct: 267 AFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDERLNDIVGSAYYVAPEV 326
Query: 273 LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
L R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P F PWP +S+ AK
Sbjct: 327 LHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPFLSSDAK 386
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 392
DFVK+LL KDPR R++A+QAL HPW+R IP DI + M+ +++ S L++ ALR
Sbjct: 387 DFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFRQMKAYLRSSSLRKAALR 446
Query: 393 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 452
AL+ TL +E+ L+ QF + +K+G I+++ +R ALA + +KESR+ E L ++
Sbjct: 447 ALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNATEAMKESRIPEFLALLNG 506
Query: 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512
+DF EF AA ++VHQ E D W + A+E FD + + I EEL G+
Sbjct: 507 LQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKNGNRAIVIEELASELGVG 564
Query: 513 GSID--PLLEEADIDKDGRISLSEFRRLLRTASI 544
SI +L + DG++S F +LL S+
Sbjct: 565 PSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/456 (48%), Positives = 311/456 (68%), Gaps = 18/456 (3%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y++GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 67 EDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRREVQIMH 126
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+ AA ++R ++++
Sbjct: 127 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSERAAASLLRTIVQI 184
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFL + E+S LKATDFGLS F KPG+ F+DIVGSAYY+APE
Sbjct: 185 VHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPE 244
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR DF PWPSIS A
Sbjct: 245 VLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQA 304
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++QF + K+ AL
Sbjct: 305 KDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVAL 364
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L E V ++++A D
Sbjct: 365 RVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAAD 423
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----- 506
+ +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+IT EEL
Sbjct: 424 ADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGYITMEELEQALRE 477
Query: 507 --MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
M+ G I ++ E D D DGRI+ EF ++R
Sbjct: 478 FGMNDGR--DIKEIISEVDGDNDGRINYDEFVAMMR 511
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/506 (45%), Positives = 328/506 (64%), Gaps = 22/506 (4%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD---RRYTIG 101
TT + H HQ+ +K Q K+H T + + T+ K F+ + YT+G
Sbjct: 50 TTTQSNHHHQQESKPVNQQIEKKHVLTQPLKPI----VFRETETILGKPFEEIRKLYTLG 105
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG TY + + G+ A K I K K+ ++DVKRE++I+Q L+G EN+V+
Sbjct: 106 KELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKREIQIMQYLSGQENIVE 165
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+ED +++ MELC G EL DRI+A+ Y+EK AA V+R +L V CH G++
Sbjct: 166 IKGAYEDRQSIHLVMELCGGSELFDRIIAQ--GHYSEKAAAGVIRSVLNVVQICHFMGVI 223
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
HRD+KPENFL S E++ LKATDFGLS FI+ GK ++DIVGSAYYVAPEVL+R G E
Sbjct: 224 HRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEI 283
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS G+I YILLCG PFW +TE GIF E+++ + DF +PWPSIS SAKD V+KLL K
Sbjct: 284 DIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSISESAKDLVRKLLTK 343
Query: 342 DPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDE 401
DP+ R++AAQAL HPW+R GG+A + PID +VL+ M+QF ++LK+ AL+ +A +L +E
Sbjct: 344 DPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEE 402
Query: 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFS 461
E+ L+ F +D DK+G+I+ EE++ LAK L KL E+ V ++++A D + +G +D+
Sbjct: 403 EIKGLKTMFANMDTDKSGTITYEELKNGLAK-LGSKLTEAEVKQLMEAADVDGNGTIDYI 461
Query: 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSID 516
EF++AT+H ++ + + H+ AF+ FD D GFIT +EL G + SI
Sbjct: 462 EFISATMHRYRFDRDE----HVFK--AFQYFDKDNSGFITMDELESAMKEYGMGDEASIK 515
Query: 517 PLLEEADIDKDGRISLSEFRRLLRTA 542
++ E D D DGRI+ EF ++R+
Sbjct: 516 EVIAEVDTDNDGRINYEEFCAMMRSG 541
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 307/457 (67%), Gaps = 13/457 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
++F Y++G+ LG GQFG T++ +K G+ A K I K K++ VEDV+RE++I+
Sbjct: 180 ENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMH 239
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
LAGH NV+ A+ED V++ MELC GGEL DRI+ + YTE+ AA + R ++ V
Sbjct: 240 HLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQR--GHYTERKAAELARTIVGV 297
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFLF S +EDS LK DFGLS F KP + F D+VGS YYVAPE
Sbjct: 298 LEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPE 357
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VL+++ GPESDVWS GVI YILL G PFW +TE GIF++VL DF PWPSIS SA
Sbjct: 358 VLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESA 417
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+ M+QF ++ K+ AL
Sbjct: 418 KDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMAL 477
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A +L +EE+A L+ F ID D +G I+ EE++ L K + LKES +L+++QA D
Sbjct: 478 RVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL-KRVGANLKESEILDLMQAAD 536
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-- 509
+ G +D+ EF+AATLH++++E D HL AAF FD D GFITP+EL+
Sbjct: 537 VDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFSYFDKDESGFITPDELQQACEE 590
Query: 510 -GLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTASI 544
G++ + I+ ++ + D DKDGRI +EF +++ SI
Sbjct: 591 FGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/473 (46%), Positives = 315/473 (66%), Gaps = 23/473 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D YT+GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 62 EDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRREVQIMH 121
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+ AA ++R ++++
Sbjct: 122 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSERAAASLLRTIVQI 179
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFL S E+S LKATDFGLS F KPG+ F+DIVGSAYY+APE
Sbjct: 180 IHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPE 239
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L + DF PWP IS A
Sbjct: 240 VLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQA 299
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++QF + K+ AL
Sbjct: 300 KDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVAL 359
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L E V ++++A D
Sbjct: 360 RVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAAD 418
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----- 506
+ +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+IT EEL
Sbjct: 419 ADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGYITTEELEQALRE 472
Query: 507 --MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHR 557
M+ G I ++ E D D DGRI+ EF ++R N P+P R
Sbjct: 473 FGMNDGR--DIKEIISEVDGDNDGRINYEEFVAMMRKG-----NPDPNPKKRR 518
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | ||||||
| 225431134 | 558 | PREDICTED: calcium-dependent protein kin | 0.980 | 0.987 | 0.831 | 0.0 | |
| 224134094 | 556 | calcium dependent protein kinase 18 [Pop | 0.985 | 0.996 | 0.824 | 0.0 | |
| 449434158 | 543 | PREDICTED: calcium-dependent protein kin | 0.960 | 0.994 | 0.859 | 0.0 | |
| 255561295 | 575 | calcium-dependent protein kinase, putati | 0.868 | 0.848 | 0.926 | 0.0 | |
| 224074263 | 557 | calcium dependent protein kinase 16 [Pop | 0.987 | 0.996 | 0.828 | 0.0 | |
| 395863620 | 550 | CDPK1 [Fragaria vesca] | 0.969 | 0.990 | 0.818 | 0.0 | |
| 147789502 | 534 | hypothetical protein VITISV_019799 [Viti | 0.944 | 0.994 | 0.808 | 0.0 | |
| 350538611 | 565 | calcium-dependent protein kinase [Solanu | 0.902 | 0.897 | 0.859 | 0.0 | |
| 325683724 | 552 | calcium-dependent protein kinase [Fragar | 0.982 | 1.0 | 0.820 | 0.0 | |
| 16904224 | 572 | calcium-dependent protein kinase CPK4 [N | 0.953 | 0.937 | 0.827 | 0.0 |
| >gi|225431134|ref|XP_002267099.1| PREDICTED: calcium-dependent protein kinase 16 [Vitis vinifera] gi|297735013|emb|CBI17375.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/569 (83%), Positives = 507/569 (89%), Gaps = 18/569 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKT----NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTY 113
++ QQ + Q QK N RR TG+IPCGKRTDFGY KDFD RYTIGKLLGHGQFGYTY
Sbjct: 51 RSNQQHRNPQPQKVKDRANGRRGTGIIPCGKRTDFGYAKDFDARYTIGKLLGHGQFGYTY 110
Query: 114 VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173
VATDKANGDRVAVK+IEKNKMILPIAVEDVKREVKIL+AL GHENVV+F+NAFEDD+YVY
Sbjct: 111 VATDKANGDRVAVKRIEKNKMILPIAVEDVKREVKILEALTGHENVVQFHNAFEDDSYVY 170
Query: 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233
I MELCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLVHRDMKPENFLFK
Sbjct: 171 IVMELCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLVHRDMKPENFLFK 230
Query: 234 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYIL 293
S KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVITYIL
Sbjct: 231 STKEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVITYIL 290
Query: 294 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
LCG+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKDPRARLTAAQAL
Sbjct: 291 LCGKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKDPRARLTAAQAL 350
Query: 354 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAI 413
SHPWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEELADLRDQFDAI
Sbjct: 351 SHPWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEELADLRDQFDAI 410
Query: 414 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473
DVDKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+EFVAATLHVHQL
Sbjct: 411 DVDKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQL 470
Query: 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS 533
EEHDS+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEADIDKDGRISL+
Sbjct: 471 EEHDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEADIDKDGRISLA 530
Query: 534 EFRRLLRTASISSRNVPPSPSGHRNPRKL 562
EFRRLLRTASISSR V PS SG RNPRK+
Sbjct: 531 EFRRLLRTASISSRQV-PSSSGFRNPRKI 558
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134094|ref|XP_002327754.1| calcium dependent protein kinase 18 [Populus trichocarpa] gi|222836839|gb|EEE75232.1| calcium dependent protein kinase 18 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/564 (82%), Positives = 498/564 (88%), Gaps = 10/564 (1%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHK--HQHQHQERAK 58
MG C ST KVSGSNS NNN H R + + + H HQ+ +
Sbjct: 1 MGACFSTIKVSGSNS---NNNVIHSRKEPTKPQTKTTKATTATRKKQEVVHHHQNNKNVN 57
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVA DK
Sbjct: 58 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDMRYTIGKLLGHGQFGYTYVAIDK 113
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
ANGDRVAVK+IEKNKM+LPIAVEDVKREVKIL+ L GHENVV+FYNA EDD+YVYI MEL
Sbjct: 114 ANGDRVAVKRIEKNKMVLPIAVEDVKREVKILRELTGHENVVQFYNALEDDSYVYIVMEL 173
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
CEGGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS K D
Sbjct: 174 CEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKGD 233
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR 298
S LKATDFGLSDFIKPG+KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR
Sbjct: 234 SPLKATDFGLSDFIKPGRKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR 293
Query: 299 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
PFWDKTEDGIFKEVL+NKPDFRRKPWP+IS SAKDFV KLLVKDPRARLTAAQALSHPWV
Sbjct: 294 PFWDKTEDGIFKEVLKNKPDFRRKPWPTISTSAKDFVNKLLVKDPRARLTAAQALSHPWV 353
Query: 359 REGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 418
REGG ASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL+DQFDAIDVDKN
Sbjct: 354 REGGVASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADLKDQFDAIDVDKN 413
Query: 419 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478
G+ISLEEMRQALAKDLPWKLKESRVLEI+QAID NTDGLVDF+EFVAA LHVHQL+EH+S
Sbjct: 414 GAISLEEMRQALAKDLPWKLKESRVLEIVQAIDSNTDGLVDFTEFVAAALHVHQLQEHNS 473
Query: 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 538
EKW LRSQAAFEKFDIDRDG+ITPEELRMHTGL+GSIDPLLEEADIDKDG+ISLSEFRRL
Sbjct: 474 EKWQLRSQAAFEKFDIDRDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRL 533
Query: 539 LRTASISSRNVPPSPSGHRNPRKL 562
LRTAS+SSRNV PSPSGHR K+
Sbjct: 534 LRTASMSSRNV-PSPSGHRKSHKI 556
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434158|ref|XP_004134863.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] gi|449491358|ref|XP_004158870.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/547 (85%), Positives = 496/547 (90%), Gaps = 7/547 (1%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +KVSGSNS +NN NHHR + + + DT+ + + +N
Sbjct: 1 MGVCFSASKVSGSNSNTNNTVVNHHRRGSTANPQ-----PSTTDTSQNQKRPNDNPKRNS 55
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
QQLK K+ K SRRQ+GVIPCGKRTDFGY K+FD RYTIGKLLGHGQFGYTYVA DK N
Sbjct: 56 QQLKIKE--KNVSRRQSGVIPCGKRTDFGYHKNFDERYTIGKLLGHGQFGYTYVAIDKGN 113
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVKKIEKNKMILPIAVEDVKREVKILQ L GHENVV+F+NAFEDD+YVYI MELCE
Sbjct: 114 GDRVAVKKIEKNKMILPIAVEDVKREVKILQELTGHENVVQFHNAFEDDSYVYIVMELCE 173
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
GGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRD+KPENFLFKSAKEDS
Sbjct: 174 GGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDLKPENFLFKSAKEDSH 233
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 300
LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF
Sbjct: 234 LKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 293
Query: 301 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
WDKTEDGIFKEVLRNKPDFRRKPWPSIS SAKDF+KKLLVKDPRARLTAAQALSH WVRE
Sbjct: 294 WDKTEDGIFKEVLRNKPDFRRKPWPSISPSAKDFIKKLLVKDPRARLTAAQALSHRWVRE 353
Query: 361 GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGS 420
GGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+ +EELADLRDQFDAIDVDKNGS
Sbjct: 354 GGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIGEEELADLRDQFDAIDVDKNGS 413
Query: 421 ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480
ISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEEHDS K
Sbjct: 414 ISLEEMRQALAKDLPWKLKESRVLEILQAIDVNTDGLVDFTEFVAATLHVHQLEEHDSVK 473
Query: 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
W RSQAAFEKFDID+DGFITPEELRMHTGLKGSIDPLLEEADIDKDG+ISLSEFRRLLR
Sbjct: 474 WQQRSQAAFEKFDIDKDGFITPEELRMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLR 533
Query: 541 TASISSR 547
TASISSR
Sbjct: 534 TASISSR 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561295|ref|XP_002521658.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223539049|gb|EEF40645.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/489 (92%), Positives = 470/489 (96%), Gaps = 1/489 (0%)
Query: 74 RRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
RR GVIPCGKRTDFGY KDFD+RY+IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK
Sbjct: 88 RRPGGVIPCGKRTDFGYAKDFDKRYSIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 147
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 193
M+LPIAVEDVKREVKILQ LAGHENVV FYNAFEDD++VYI MELCEGGELLDRIL KKD
Sbjct: 148 MVLPIAVEDVKREVKILQELAGHENVVHFYNAFEDDSFVYIVMELCEGGELLDRILLKKD 207
Query: 194 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253
SRYTEKDAAV+VRQML+VAAECHLHGLVHRDMKPENFLFKS K+DS LKATDFGLSDFIK
Sbjct: 208 SRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKDDSPLKATDFGLSDFIK 267
Query: 254 PGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313
PGKKFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL
Sbjct: 268 PGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 327
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 373
RNKPDFRRKPWPSIS+SAKDFVKKLLVKDPR RLTAAQALSHPWVREGG+ASEIPIDISV
Sbjct: 328 RNKPDFRRKPWPSISSSAKDFVKKLLVKDPRVRLTAAQALSHPWVREGGNASEIPIDISV 387
Query: 374 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433
LNNMRQFVKYSR KQFALRALASTLDDEEL+DLRDQFDAIDVDKNGSISLEEMRQALAKD
Sbjct: 388 LNNMRQFVKYSRFKQFALRALASTLDDEELSDLRDQFDAIDVDKNGSISLEEMRQALAKD 447
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 493
LPWKLKESRVLEILQAID NTDGLVDFSEFVAA LHVHQLEEH+SEKW RSQAAFEKFD
Sbjct: 448 LPWKLKESRVLEILQAIDSNTDGLVDFSEFVAAALHVHQLEEHNSEKWQHRSQAAFEKFD 507
Query: 494 IDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSP 553
ID+DGFIT EELRMHTGL+GSIDPLLEEADIDKDG+ISLSEFRRLLRTASISSRN PSP
Sbjct: 508 IDKDGFITSEELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRTASISSRNA-PSP 566
Query: 554 SGHRNPRKL 562
SGHRN RK+
Sbjct: 567 SGHRNSRKM 575
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224074263|ref|XP_002304327.1| calcium dependent protein kinase 16 [Populus trichocarpa] gi|222841759|gb|EEE79306.1| calcium dependent protein kinase 16 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/564 (82%), Positives = 504/564 (89%), Gaps = 9/564 (1%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHAR--NDTTHKHQHQHQERAK 58
MG C ST +SGSNS +NN ANH+R + R R + H H HQ +
Sbjct: 1 MGACFSTINISGSNS-NNNTKANHNRKEPTKPQTRTTKAATRKKQEVVH-HHHQINKNVN 58
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVATDK
Sbjct: 59 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDIRYTIGKLLGHGQFGYTYVATDK 114
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
NGDRVAVK+I+KNKM+LPIAVEDVKREV+ILQ L GHENVV+F+NAFEDD+YVYI MEL
Sbjct: 115 GNGDRVAVKRIDKNKMVLPIAVEDVKREVRILQELTGHENVVQFHNAFEDDSYVYIVMEL 174
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
CEGGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS KED
Sbjct: 175 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKED 234
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR 298
S LKATDFGLSDFIKPG+KF+DIVGSAYYVAPEVLKR SGPESDVWSIGVITYILLCGRR
Sbjct: 235 SPLKATDFGLSDFIKPGRKFKDIVGSAYYVAPEVLKRNSGPESDVWSIGVITYILLCGRR 294
Query: 299 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
PFWDKTEDGIFKEVLRNKPDFRRKPWP+IS SAKDFV+KLLVKDPRARLTAAQALSHPWV
Sbjct: 295 PFWDKTEDGIFKEVLRNKPDFRRKPWPTISTSAKDFVQKLLVKDPRARLTAAQALSHPWV 354
Query: 359 REGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 418
REGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL+DQFDAIDVDKN
Sbjct: 355 REGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADLKDQFDAIDVDKN 414
Query: 419 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478
G+ISLEEMRQALAKDLPWKLKES VLEI+QAID NTDGLVDF+EFVAA LHVHQLEEH+S
Sbjct: 415 GAISLEEMRQALAKDLPWKLKESLVLEIVQAIDSNTDGLVDFTEFVAAALHVHQLEEHNS 474
Query: 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 538
EKW LRSQAAFEKFDIDRDG+ITPEELRMH+GL+GS+DPLLEEADIDKDGRISLSEFRRL
Sbjct: 475 EKWQLRSQAAFEKFDIDRDGYITPEELRMHSGLRGSVDPLLEEADIDKDGRISLSEFRRL 534
Query: 539 LRTASISSRNVPPSPSGHRNPRKL 562
LRTAS+SS+NV P PSGHRN +KL
Sbjct: 535 LRTASMSSQNV-PDPSGHRNSKKL 557
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395863620|gb|AFN80337.1| CDPK1 [Fragaria vesca] | Back alignment and taxonomy information |
|---|
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/567 (81%), Positives = 507/567 (89%), Gaps = 22/567 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNA-NKEEAKR----RHNHHARNDTTHKHQHQHQE 55
MG CL+T KV+GSNS +NNN A N+++ R + NHH N+ K++H
Sbjct: 1 MGGCLTTAKVTGSNSNTNNNPATTVTAVVNRKQTTRPQPAQTNHHRPNEAQKKNKH---- 56
Query: 56 RAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVA 115
K+KQ +SR++TGVIPCGKRTDFGYDK+FDRRYTIGKLLGHGQFGYTYVA
Sbjct: 57 --------KSKQ----SSRQKTGVIPCGKRTDFGYDKNFDRRYTIGKLLGHGQFGYTYVA 104
Query: 116 TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175
TD++NGDRVAVK I+KNKMILPIAVEDVKREV+ILQALAGHENVV+F+NA EDD YVYI
Sbjct: 105 TDRSNGDRVAVKGIDKNKMILPIAVEDVKREVEILQALAGHENVVQFFNACEDDTYVYIV 164
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
MELCEGGELLDRIL KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS
Sbjct: 165 MELCEGGELLDRILEKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSK 224
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 295
DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVI+YILLC
Sbjct: 225 ALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVISYILLC 284
Query: 296 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 285 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSH 344
Query: 356 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 415
PWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELADL+DQFDAIDV
Sbjct: 345 PWVREGGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELADLKDQFDAIDV 404
Query: 416 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475
DKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 405 DKNGSISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVAATLHVHQLEE 464
Query: 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 535
HDSEKW S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADIDKDG+ISLSEF
Sbjct: 465 HDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADIDKDGKISLSEF 524
Query: 536 RRLLRTASISSRNVPPSPSGHRNPRKL 562
RRLLRTAS+S + V PSG RN R++
Sbjct: 525 RRLLRTASMSPQKV-ADPSGQRNSRQV 550
|
Source: Fragaria vesca Species: Fragaria vesca Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147789502|emb|CAN69589.1| hypothetical protein VITISV_019799 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/565 (80%), Positives = 490/565 (86%), Gaps = 34/565 (6%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATD 117
++ QQ + Q QK KDFD RYTIGKLLGHGQFGYTYVATD
Sbjct: 51 RSNQQHRNPQPQKA--------------------KDFDARYTIGKLLGHGQFGYTYVATD 90
Query: 118 KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177
KANGDRVAVK+IEKNKMILPIAVEDVKREVKIL+AL GHENVV+F+NAFEDD+YVYI ME
Sbjct: 91 KANGDRVAVKRIEKNKMILPIAVEDVKREVKILEALTGHENVVQFHNAFEDDSYVYIVME 150
Query: 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237
LCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLVHRDMKPENFLFKS KE
Sbjct: 151 LCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKE 210
Query: 238 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 297
DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVITYILLCG+
Sbjct: 211 DSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVITYILLCGK 270
Query: 298 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKDPRARLTAAQALSHPW
Sbjct: 271 RPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKDPRARLTAAQALSHPW 330
Query: 358 VREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDK 417
VREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEELADLRDQFDAIDVDK
Sbjct: 331 VREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEELADLRDQFDAIDVDK 390
Query: 418 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477
NGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEEHD
Sbjct: 391 NGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHD 450
Query: 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRR 537
S+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEADIDKDGRISL+EFRR
Sbjct: 451 SDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEADIDKDGRISLAEFRR 510
Query: 538 LLRTASISSRNVPPSPSGHRNPRKL 562
LLRTASISSR V PS SG RNPRK+
Sbjct: 511 LLRTASISSRQV-PSSSGFRNPRKI 534
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538611|ref|NP_001234607.1| calcium-dependent protein kinase [Solanum lycopersicum] gi|241994912|gb|ACS74732.1| calcium-dependent protein kinase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/512 (85%), Positives = 476/512 (92%), Gaps = 5/512 (0%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N D + +Q Q++ +N QQ + K +SRRQ GVIPCGKRTDFGY KDF++R
Sbjct: 53 NQEGCRDKGNINQKNQQKQPRNSQQ-----NVKPSSRRQGGVIPCGKRTDFGYHKDFEKR 107
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YTIGKLLGHGQFGYTYVATDK++GDRVAVK+IEKNKM+LPIAVEDVKREVKIL+AL GHE
Sbjct: 108 YTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALGGHE 167
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
NVV+FYN+FEDDNYVYI MELCEGGELLDRIL+KKDSRYTEKDAA+VVRQML+VAAECHL
Sbjct: 168 NVVQFYNSFEDDNYVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVVRQMLKVAAECHL 227
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
HGLVHRDMKPENFLFKS KEDS LKATDFGLSDFI+PGKKFQDIVGSAYYVAPEVLKR+S
Sbjct: 228 HGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRS 287
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW +ISNSAKDFVKK
Sbjct: 288 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWSNISNSAKDFVKK 347
Query: 338 LLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 397
+LVKDPRARLTAAQALSHPWVREGGDASEIP+DISVL+NMRQFVKYSRLKQFALRALAST
Sbjct: 348 ILVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMRQFVKYSRLKQFALRALAST 407
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
LD+EE+ADLRDQF AIDVDKNG ISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGL
Sbjct: 408 LDEEEIADLRDQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGL 467
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP 517
VDF EFVAATLHVHQLEEH+S KW RSQAAFEKFD+D+DGFITPEEL+MHTGL+GSIDP
Sbjct: 468 VDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEKFDVDKDGFITPEELKMHTGLRGSIDP 527
Query: 518 LLEEADIDKDGRISLSEFRRLLRTASISSRNV 549
LLEEADIDKDG+IS+SEFRRLLRTAS+SS V
Sbjct: 528 LLEEADIDKDGKISISEFRRLLRTASMSSPTV 559
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|325683724|gb|ADZ44603.1| calcium-dependent protein kinase [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/562 (82%), Positives = 495/562 (88%), Gaps = 10/562 (1%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG CL+T KV+GSNS +N NN R TT Q N
Sbjct: 1 MGGCLTTAKVTGSNSNTNTNNNPATTTTAVVN---------RKQTTRPPPAQTNHHRANE 51
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
Q K K K +SR++TG+IPCGKRTDFGYDK+FDRRY IGKLLGHGQFGYTYV TD++N
Sbjct: 52 AQKKHKHKPKQSSRQKTGMIPCGKRTDFGYDKNFDRRYMIGKLLGHGQFGYTYVVTDRSN 111
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVK+I+KNKMILPIAVEDVKREVKILQALAGHENVV+FYNA EDD YVYI MELCE
Sbjct: 112 GDRVAVKRIDKNKMILPIAVEDVKREVKILQALAGHENVVQFYNACEDDTYVYIVMELCE 171
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
GGELLDRIL KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS DS
Sbjct: 172 GGELLDRILEKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSKALDSP 231
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 300
LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSG ESDVWSIGVITYILLCGRRPF
Sbjct: 232 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGRESDVWSIGVITYILLCGRRPF 291
Query: 301 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
WDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDF KKLLVKDPRARLTAAQALSHPWVRE
Sbjct: 292 WDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFAKKLLVKDPRARLTAAQALSHPWVRE 351
Query: 361 GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGS 420
GGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELADL+DQFDAIDVDKNGS
Sbjct: 352 GGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELADLKDQFDAIDVDKNGS 411
Query: 421 ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480
ISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVAATLHVHQLEEHDSEK
Sbjct: 412 ISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEK 471
Query: 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
W S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADIDKDG+ISLSEFRRLLR
Sbjct: 472 WQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADIDKDGKISLSEFRRLLR 531
Query: 541 TASISSRNVPPSPSGHRNPRKL 562
TAS+SS+ V SPSG RN R++
Sbjct: 532 TASMSSQKV-ASPSGQRNSRQV 552
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16904224|gb|AAL30819.1|AF435451_1 calcium-dependent protein kinase CPK4 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/540 (82%), Positives = 484/540 (89%), Gaps = 4/540 (0%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQ-TG 78
N AN + K+ +H + H+ QHQ++ Q K+H N RRQ +G
Sbjct: 33 NKANPPSTSTITSTKQEGSHCNKQKVKDNHKSQHQKQQPRNSQQNVKKH--NNGRRQKSG 90
Query: 79 VIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI 138
VI CGKRTDFGYDKDFD+R+TIGKLLGHGQFGYTYVAT K+NGDRVAVK+IEKNKM+LPI
Sbjct: 91 VIACGKRTDFGYDKDFDKRFTIGKLLGHGQFGYTYVATHKSNGDRVAVKRIEKNKMVLPI 150
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
AVEDVKREVKIL+AL+GHENVV+F NAFEDDNYVYI MELCEGGELLDRILAKKDSRY E
Sbjct: 151 AVEDVKREVKILKALSGHENVVQFNNAFEDDNYVYIVMELCEGGELLDRILAKKDSRYAE 210
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
KDAA+VVRQML+ AA+CHLHGLVHRDMKPENFLFKS+KEDS LKATDFGLSDFI+PGKKF
Sbjct: 211 KDAAIVVRQMLKEAAQCHLHGLVHRDMKPENFLFKSSKEDSPLKATDFGLSDFIRPGKKF 270
Query: 259 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
QDIVGSAYYVAPEVLKR+SGPESD WSIGVITYILLCGRR FWDKTEDGIFKEVLRNKPD
Sbjct: 271 QDIVGSAYYVAPEVLKRRSGPESDEWSIGVITYILLCGRRRFWDKTEDGIFKEVLRNKPD 330
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 378
FRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP+DISVL+NMR
Sbjct: 331 FRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMR 390
Query: 379 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL 438
QFVKYSRLKQFALRALAST+D+EELAD+RDQF AIDVDKNG ISLEEMRQALAKDLPWK+
Sbjct: 391 QFVKYSRLKQFALRALASTVDEEELADVRDQFSAIDVDKNGVISLEEMRQALAKDLPWKM 450
Query: 439 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDG 498
KESRVLEILQAID N+DGL+DF EFVAATLHVHQLEEH+S KW RSQAAFE+FD+DRDG
Sbjct: 451 KESRVLEILQAIDSNSDGLLDFPEFVAATLHVHQLEEHNSIKWQERSQAAFEEFDVDRDG 510
Query: 499 FITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV-PPSPSGHR 557
FITPEELRMHTGLKGSIDPLLEEADIDKDG+ISLSEFRRLLRTASISSR V P+ G R
Sbjct: 511 FITPEELRMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLRTASISSRMVTSPTVRGSR 570
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | ||||||
| TAIR|locus:2827826 | 571 | CPK16 "AT2G17890" [Arabidopsis | 0.916 | 0.901 | 0.829 | 2.6e-228 | |
| TAIR|locus:2156947 | 523 | CPK28 "calcium-dependent prote | 0.871 | 0.936 | 0.843 | 3e-227 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.782 | 0.833 | 0.480 | 3.5e-114 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.884 | 0.769 | 0.449 | 1.2e-113 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.804 | 0.864 | 0.467 | 3.2e-113 | |
| TAIR|locus:2012232 | 606 | AT1G49580 [Arabidopsis thalian | 0.896 | 0.831 | 0.467 | 4.1e-113 | |
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.813 | 0.863 | 0.465 | 2.2e-112 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.791 | 0.729 | 0.480 | 9.7e-112 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.777 | 0.838 | 0.476 | 4.2e-111 | |
| TAIR|locus:2094053 | 599 | AT3G19100 [Arabidopsis thalian | 0.880 | 0.826 | 0.464 | 2.3e-110 |
| TAIR|locus:2827826 CPK16 "AT2G17890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2203 (780.6 bits), Expect = 2.6e-228, P = 2.6e-228
Identities = 434/523 (82%), Positives = 459/523 (87%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYT 99
H+ Q + AK T H K N RR IP GKR DFGY KDFD RYT
Sbjct: 50 HRTQPRRNATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYT 109
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IGKLLGHGQFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREVKILQAL GHENV
Sbjct: 110 IGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENV 169
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V+FYNAFED N VYI MELCEGGELLDRILA+KDSRY+E+DAAVVVRQML+VAAECHL G
Sbjct: 170 VRFYNAFEDKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRG 229
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP 279
LVHRDMKPENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKR+SGP
Sbjct: 230 LVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGP 289
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
ESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAKDFVKKLL
Sbjct: 290 ESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLL 349
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLD 399
VKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALRALA+TLD
Sbjct: 350 VKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLD 409
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 459
+EELADLRDQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV EILQAID NTDG VD
Sbjct: 410 EEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVD 469
Query: 460 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLL 519
F EFVAA LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EELRMHTGLKGSI+PLL
Sbjct: 470 FGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSIEPLL 529
Query: 520 EEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 562
EEADID DG+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 530 EEADIDNDGKISLQEFRRLLRTASIKSRNVR-SPPGYLISRKV 571
|
|
| TAIR|locus:2156947 CPK28 "calcium-dependent protein kinase 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2193 (777.0 bits), Expect = 3.0e-227, P = 3.0e-227
Identities = 414/491 (84%), Positives = 461/491 (93%)
Query: 70 KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + NGDRVAVK++
Sbjct: 34 KASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPNGDRVAVKRL 93
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
+K+KM+LPIAVEDVKREV+IL AL+GHENVV+F+NAFEDD+YVYI MELCEGGELLDRIL
Sbjct: 94 DKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVMELCEGGELLDRIL 153
Query: 190 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKSA+ DS LKATDFGLS
Sbjct: 154 SKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSAQLDSPLKATDFGLS 213
Query: 250 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 309
DFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPFWD+TEDGIF
Sbjct: 214 DFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDRTEDGIF 273
Query: 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
KEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALSH WVREGG+A++IP+
Sbjct: 274 KEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSHAWVREGGNATDIPV 333
Query: 370 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQA 429
DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAIDVDKNG ISLEEMRQA
Sbjct: 334 DISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDVDKNGVISLEEMRQA 393
Query: 430 LAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 489
LAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLEEHDSEKW LRS+AAF
Sbjct: 394 LAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEKWQLRSRAAF 453
Query: 490 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 549
EKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL EFRRLLRTASISS+
Sbjct: 454 EKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEFRRLLRTASISSQRA 513
Query: 550 PPSPSGHRNPR 560
P SP+GHRN R
Sbjct: 514 P-SPAGHRNLR 523
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 218/454 (48%), Positives = 310/454 (68%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y++GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 67 EDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRREVQIMH 126
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+ AA ++R ++++
Sbjct: 127 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSERAAASLLRTIVQI 184
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFL + E+S LKATDFGLS F KPG+ F+DIVGSAYY+APE
Sbjct: 185 VHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPE 244
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR DF PWPSIS A
Sbjct: 245 VLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQA 304
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++QF + K+ AL
Sbjct: 305 KDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVAL 364
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L E V ++++A D
Sbjct: 365 RVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAAD 423
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---H 508
+ +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+IT EEL
Sbjct: 424 ADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGYITMEELEQALRE 477
Query: 509 TGLKGSID--PLLEEADIDKDGRISLSEFRRLLR 540
G+ D ++ E D D DGRI+ EF ++R
Sbjct: 478 FGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMR 511
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 234/521 (44%), Positives = 331/521 (63%)
Query: 31 EEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGY 90
E AK ++ +TT + + ++ + K + + + RR V G RT+
Sbjct: 124 ESAKPETKSESKPETT-----KPETTSETKPETKAEPQKPKHMRR---VSSAGLRTESVL 175
Query: 91 DK---DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+ +F Y++G+ LG GQFG T++ +K G+ A K I K K++ VEDV+RE+
Sbjct: 176 QRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREI 235
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+I+ LAGH NV+ A+ED V++ MELC GGEL DRI+ + YTE+ AA + R
Sbjct: 236 QIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQR--GHYTERKAAELART 293
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
++ V CH G++HRD+KPENFLF S +EDS LK DFGLS F KP + F D+VGS YY
Sbjct: 294 IVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYY 353
Query: 268 VAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
VAPEVL+++ GPESDVWS GVI YILL G PFW +TE GIF++VL DF PWPSI
Sbjct: 354 VAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSI 413
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 387
S SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+ M+QF ++ K
Sbjct: 414 SESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFK 473
Query: 388 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 447
+ ALR +A +L +EE+A L+ F ID D +G I+ EE++ L K + LKES +L+++
Sbjct: 474 KMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL-KRVGANLKESEILDLM 532
Query: 448 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 507
QA D + G +D+ EF+AATLH++++E D HL AAF FD D GFITP+EL+
Sbjct: 533 QAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFSYFDKDESGFITPDELQQ 586
Query: 508 ---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTASI 544
G++ + I+ ++ + D DKDGRI +EF +++ SI
Sbjct: 587 ACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 220/471 (46%), Positives = 314/471 (66%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D YT+GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 62 EDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRREVQIMH 121
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+ AA ++R ++++
Sbjct: 122 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSERAAASLLRTIVQI 179
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFL S E+S LKATDFGLS F KPG+ F+DIVGSAYY+APE
Sbjct: 180 IHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPE 239
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L + DF PWP IS A
Sbjct: 240 VLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQA 299
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++QF + K+ AL
Sbjct: 300 KDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVAL 359
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L E V ++++A D
Sbjct: 360 RVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAAD 418
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---H 508
+ +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+IT EEL
Sbjct: 419 ADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGYITTEELEQALRE 472
Query: 509 TGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHR 557
G+ D ++ E D D DGRI+ EF ++R N P+P R
Sbjct: 473 FGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKG-----NPDPNPKKRR 518
|
|
| TAIR|locus:2012232 AT1G49580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 241/516 (46%), Positives = 324/516 (62%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLK--TKQHQKTNSRRQTGVIPCGKRTDFGYDKD 93
R H + H + + K L T+ + R + + KR FG+ K+
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKR--FGFSKE 145
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
F R +G+ +G G FGYT A K G VAVK I K+KM IA+EDV+REVKIL
Sbjct: 146 FHSRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSKMTTAIAIEDVRREVKIL 205
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
QAL+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +Y+E DA V+ Q+L
Sbjct: 206 QALSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR-GGKYSENDAKPVIIQILN 264
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
V A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P ++ DIVGSAYYVAP
Sbjct: 265 VVAFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDERLNDIVGSAYYVAP 324
Query: 271 EVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
EVL R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P F PWP +S+
Sbjct: 325 EVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPFLSSD 384
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA 390
AKDFVK+LL KDPR R++A+QAL HPW+R IP DI + M+ +++ S L++ A
Sbjct: 385 AKDFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFRQMKAYLRSSSLRKAA 444
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 450
LRAL+ TL +E+ L+ QF + +K+G I+++ +R ALA + +KESR+ E L +
Sbjct: 445 LRALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNATEAMKESRIPEFLALL 504
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510
+ +DF EF AA ++VHQ E D W + A+E FD + + I EEL G
Sbjct: 505 NGLQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKNGNRAIVIEELASELG 562
Query: 511 LKGSID--PLLEEADIDKDGRISLSEFRRLLRTASI 544
+ SI +L + DG++S F +LL S+
Sbjct: 563 VGPSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
|
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 222/477 (46%), Positives = 319/477 (66%)
Query: 69 QKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKK 128
+ T S +Q G I G+ + + R Y G+ LG GQFG TY+ T K +VA K
Sbjct: 55 RSTTSTQQNGRI-LGRPME-----EVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKS 108
Query: 129 IEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 188
I +++ +EDV+REV+I+ L+GH N+V A+ED + V + MELCEGGEL DRI
Sbjct: 109 IPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRI 168
Query: 189 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248
++K Y+E+ AA + RQM+ V CH G++HRD+KPENFLF S E+S LKATDFGL
Sbjct: 169 ISK--GLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGL 226
Query: 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
S F KPG KF+D+VGSAYYVAPEVLKR GPE+D+WS GVI YILL G PFW + E GI
Sbjct: 227 SVFFKPGDKFKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGI 286
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
F +L+ + DF PWP++S+ AKD V+K+L DP+ RLTAA+ L+HPW+RE G+AS+ P
Sbjct: 287 FDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKP 346
Query: 369 IDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ 428
+D +VL+ M+QF ++LK+ AL+ +A L +EE+ L++ F ++D D NG ++LEE+R
Sbjct: 347 LDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRT 406
Query: 429 ALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAA 488
L K L K+ E+ + ++++A D + DG +D+ EF++AT+H++++E D HL + A
Sbjct: 407 GLPK-LGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIERED----HLYT--A 459
Query: 489 FEKFDIDRDGFITPEELRM-----HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
F+ FD D G+IT EEL + + G SI ++ E D D+DG+I+ EF +++
Sbjct: 460 FQFFDNDNSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMK 516
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 220/458 (48%), Positives = 305/458 (66%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
++F Y++G+ LG GQFG T++ +K G A K I K K++ VEDV+RE++I+
Sbjct: 144 ENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMH 203
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
LAGH NV+ A+ED V++ ME C GGEL DRI+ + YTE+ AA + R ++ V
Sbjct: 204 HLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQR--GHYTERKAAELTRTIVGV 261
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
CH G++HRD+KPENFLF S EDS LK DFGLS F KP F D+VGS YYVAPE
Sbjct: 262 VEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYVAPE 321
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VL+++ GPE+DVWS GVI YILL G PFW +TE GIF++VL DF PWPSIS SA
Sbjct: 322 VLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESA 381
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 391
KD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+ M+QF ++ K+ AL
Sbjct: 382 KDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKKMAL 441
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
R +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K + LKES +L+++QA D
Sbjct: 442 RVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGANLKESEILDLMQAAD 500
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---H 508
+ G +D+ EF+AATLH++++E D HL AAF FD D G+ITP+EL+
Sbjct: 501 VDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGSGYITPDELQQACEE 554
Query: 509 TGLKG-SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 545
G++ I+ L+ + D D DGRI +EF +++ SI+
Sbjct: 555 FGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 592
|
|
| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
Identities = 215/451 (47%), Positives = 306/451 (67%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YT+ K LG GQFG TY+ T+K+ G R A K I K K++ ED++RE++I+Q L+G
Sbjct: 73 YTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQP 132
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V+F A+ED+ V + MELC GGEL DRILAK Y+E+ AA V RQ++ V CH
Sbjct: 133 NIVEFKGAYEDEKAVNLVMELCAGGELFDRILAK--GHYSERAAASVCRQIVNVVNICHF 190
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G++HRD+KPENFL S E + +KATDFGLS FI+ G+ ++DIVGSAYYVAPEVLKR+
Sbjct: 191 MGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYYVAPEVLKRRY 250
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
G E D+WS G+I YILL G PFW +TE GIF +L + DF +PWPSISNSAKD V++
Sbjct: 251 GKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRR 310
Query: 338 LLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 397
+L +DP+ R++AA+ L HPW+REGG+AS+ PID +VL+ M+QF ++LK+ AL+ +A
Sbjct: 311 MLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAEN 370
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+D EE+ L+ F ID D +G+I+ EE+++ LAK L +L E+ V +++ A D + +G
Sbjct: 371 IDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAK-LGSRLTEAEVKQLMDAADVDGNGS 429
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-----GLK 512
+D+ EF+ AT+H H+LE +++ AF+ FD D G+IT +EL G
Sbjct: 430 IDYIEFITATMHRHRLESNENV------YKAFQHFDKDGSGYITTDELEAALKEYGMGDD 483
Query: 513 GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543
+I +L + D D DGRI+ EF ++R+ +
Sbjct: 484 ATIKEILSDVDADNDGRINYDEFCAMMRSGN 514
|
|
| TAIR|locus:2094053 AT3G19100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 237/510 (46%), Positives = 320/510 (62%)
Query: 40 HARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYT 99
H + H + + K L + QK R+ + KR FG+ K+ R
Sbjct: 90 HPPSPARHIRDVLRRRKEKKEAALPAARQQKEEEEREE--VGLDKR--FGFSKELQSRIE 145
Query: 100 IGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+G+ +G G FGYT A K VAVK I K+KM I++EDV+REVKIL+AL+GH
Sbjct: 146 LGEEIGRGHFGYTCSAKFKKGELKDQEVAVKVIPKSKMTSAISIEDVRREVKILRALSGH 205
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+N+V+FY+AFED+ VYI MELC GGELLDRILA+ +Y+E DA V+ Q+L V A CH
Sbjct: 206 QNLVQFYDAFEDNANVYIVMELCGGGELLDRILAR-GGKYSEDDAKAVLIQILNVVAFCH 264
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
L G+VHRD+KPENFL+ S +E+S LK DFGLSDF++P ++ DIVGSAYYVAPEVL R
Sbjct: 265 LQGVVHRDLKPENFLYTSKEENSMLKVIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRS 324
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P F PWPS+S AKDFVK
Sbjct: 325 YTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSFEAKDFVK 384
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 396
+LL KDPR R+TA+QAL HPW+ G +IP DI + ++ +++ S L++ AL AL+
Sbjct: 385 RLLYKDPRKRMTASQALMHPWIA-GYKKIDIPFDILIFKQIKAYLRSSSLRKAALMALSK 443
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID-CNTD 455
TL +EL L+ QF + +KNG I+L+ +R ALA + +KESR+ + L ++
Sbjct: 444 TLTTDELLYLKAQFAHLAPNKNGLITLDSIRLALATNATEAMKESRIPDFLALLNGLQYK 503
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 515
G+ DF EF AA++ VHQ E D W + A+E F+++ + I EEL G+ SI
Sbjct: 504 GM-DFEEFCAASISVHQHESLDC--WEQSIRHAYELFEMNGNRVIVIEELASELGVGSSI 560
Query: 516 D--PLLEEADIDKDGRISLSEFRRLLRTAS 543
+L + DG++S F +LL S
Sbjct: 561 PVHTILNDWIRHTDGKLSFLGFVKLLHGVS 590
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKW4 | CDPKS_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7571 | 0.9306 | 1.0 | no | no |
| Q1PE17 | CDPKI_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7313 | 0.9501 | 1.0 | no | no |
| Q7XJR9 | CDPKG_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7739 | 0.9928 | 0.9772 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.979 |
| 3rd Layer | 2.7.11 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 562 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-95 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 6e-82 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-59 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 7e-58 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-57 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-57 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-54 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-54 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-54 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 8e-52 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 6e-51 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 2e-46 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-44 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-44 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 9e-44 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-43 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-42 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 5e-42 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-41 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 1e-40 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 2e-40 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-40 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-39 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 4e-39 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 7e-39 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 4e-38 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-38 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-38 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 7e-38 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-37 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 3e-36 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-35 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 3e-35 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 3e-35 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 5e-35 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 5e-35 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 5e-35 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-34 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 3e-33 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 7e-33 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 9e-33 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 6e-32 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-31 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-31 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 4e-31 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 5e-31 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-30 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-30 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 4e-30 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-30 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 5e-30 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 7e-30 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 8e-30 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 4e-29 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-29 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 6e-29 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 7e-29 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-28 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 1e-28 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 1e-28 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-28 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-28 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-28 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 3e-28 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-28 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-28 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 3e-28 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 3e-28 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 4e-28 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-28 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 7e-28 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 9e-28 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-27 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-27 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 3e-27 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 5e-27 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 5e-27 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 8e-27 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-26 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 1e-26 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-26 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-26 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-26 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 2e-26 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 3e-26 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 3e-26 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 4e-26 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 5e-26 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 6e-26 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 7e-26 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 8e-26 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 8e-26 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 1e-25 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-25 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 3e-25 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 3e-25 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 5e-25 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 6e-25 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 7e-25 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-25 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 8e-25 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-24 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-24 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 1e-24 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-24 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-24 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-24 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 4e-24 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 4e-24 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 5e-24 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 7e-24 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 8e-24 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 1e-23 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-23 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 2e-23 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-23 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 3e-23 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-23 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 4e-23 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 6e-23 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 6e-23 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 1e-22 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 1e-22 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 1e-22 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-22 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-22 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 2e-22 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 2e-22 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-22 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 3e-22 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 3e-22 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 4e-22 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 5e-22 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 5e-22 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-22 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-21 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 1e-21 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-21 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 1e-21 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-21 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 1e-21 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-21 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-21 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-21 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 3e-21 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-21 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 4e-21 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 5e-21 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 9e-21 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-20 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 1e-20 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 2e-20 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-20 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-20 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 5e-20 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 8e-20 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 9e-20 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 1e-19 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 1e-19 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-19 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-19 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 3e-19 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 3e-19 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 4e-19 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 5e-19 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 6e-19 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 6e-19 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 6e-19 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 9e-19 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-18 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-18 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 2e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-18 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 4e-18 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 5e-18 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 6e-18 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 7e-18 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 8e-18 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 9e-18 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-17 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 2e-17 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-17 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-17 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 5e-17 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 9e-17 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-16 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 1e-16 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 3e-16 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 5e-16 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-16 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-15 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-15 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-15 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-15 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 3e-15 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-15 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-15 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 6e-15 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 1e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-14 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-14 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-14 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-14 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 6e-14 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 7e-14 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 7e-14 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 7e-14 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-13 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 1e-13 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 1e-13 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-13 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-13 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-13 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 4e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-13 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 7e-13 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 7e-13 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 8e-13 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-12 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-12 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 4e-12 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-12 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 5e-12 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 6e-12 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 9e-12 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-11 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 1e-11 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-11 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-11 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-11 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 3e-11 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-11 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 3e-11 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 3e-11 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-11 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 7e-11 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 8e-11 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 9e-11 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 1e-10 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-10 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-10 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-10 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-10 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-10 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 3e-10 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 4e-10 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 4e-10 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 7e-10 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 8e-10 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 8e-10 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 1e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-09 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-09 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-09 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 6e-09 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 8e-09 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 2e-08 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-08 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-08 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 4e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 1e-07 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-07 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 4e-07 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 8e-07 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 1e-06 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-06 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 4e-06 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 5e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 7e-06 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 1e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-05 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 4e-05 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 5e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-05 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 7e-05 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 1e-04 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 1e-04 | |
| pfam10591 | 112 | pfam10591, SPARC_Ca_bdg, Secreted protein acidic a | 2e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 2e-04 | |
| cd00252 | 116 | cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ bi | 2e-04 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 3e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 3e-04 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 3e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 4e-04 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 4e-04 | |
| COG4248 | 637 | COG4248, COG4248, Uncharacterized protein with pro | 6e-04 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 6e-04 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 7e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 0.001 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 0.001 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.001 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 0.002 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 0.002 | |
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 0.002 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 0.002 | |
| COG0478 | 304 | COG0478, COG0478, RIO-like serine/threonine protei | 0.002 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 0.002 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.003 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 1e-95
Identities = 119/263 (45%), Positives = 159/263 (60%), Gaps = 11/263 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG Y+A DK G VA+K I+K K+ E + RE+KIL+ L H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIK--KDRERILREIKILKKL-KHP 57
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V+ Y+ FED++ +Y+ ME CEGG+L D + KK R +E +A +RQ+L H
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARFYLRQILSALEYLHS 115
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G+VHRD+KPEN L ED +K DFGL+ + PG+K VG+ Y+APEVL K
Sbjct: 116 KGIVHRDLKPENILLD---EDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKG 172
Query: 278 -GPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
G D+WS+GVI Y LL G+ PF D +FK++ + KP F W IS AKD +
Sbjct: 173 YGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD-ISPEAKDLI 231
Query: 336 KKLLVKDPRARLTAAQALSHPWV 358
+KLLVKDP RLTA +AL HP+
Sbjct: 232 RKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 6e-82
Identities = 102/267 (38%), Positives = 145/267 (54%), Gaps = 13/267 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G FG Y A K G VAVK ++K + +RE++IL+ L H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRL-SHP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V+ +AFED +++Y+ ME CEGG+L D + +E +A + Q+LR H
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEYLHS 116
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-- 274
+G++HRD+KPEN L E+ +K DFGL+ +K VG+ +Y+APEVL
Sbjct: 117 NGIIHRDLKPENILLD---ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGG 173
Query: 275 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSA 331
GP+ DVWS+GVI Y LL G+ PF + + + +L +F W S S A
Sbjct: 174 NGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEA 233
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358
KD +KK L KDP R TA + L HPW
Sbjct: 234 KDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 2e-59
Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 39/292 (13%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
DF GK++G G F +A +K A+K ++K ++I V+ VK E ++L
Sbjct: 1 DDFK----FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLT 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L GH ++K Y F+D+ +Y +E GELL I +K EK ++L
Sbjct: 57 RLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYI--RKYGSLDEKCTRFYAAEILLA 114
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---------- 261
H G++HRD+KPEN L +D +K TDFG + + P +
Sbjct: 115 LEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQ 171
Query: 262 -----------VGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 309
VG+A YV+PE+L K +G SD+W++G I Y +L G+ PF E F
Sbjct: 172 IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231
Query: 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPW 357
+++L+ + F P+ AKD ++KLLV DP+ RL + +HP+
Sbjct: 232 QKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 7e-58
Identities = 91/256 (35%), Positives = 134/256 (52%), Gaps = 44/256 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y+A DK G +VA+K I+K +E++ RE++IL+ L H N+VK Y
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS--SSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
FED+N++Y+ ME CEGG L D +L + + + +E + ++ Q+L H +G++HR
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKD-LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR 116
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKS--GPE 280
D+KPEN L S ++ +K DFGLS + K + IVG+ Y+APEVL K +
Sbjct: 117 DLKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEK 174
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
SD+WS+GVI Y L KD ++K+L
Sbjct: 175 SDIWSLGVILYEL-----------------------------------PELKDLIRKMLQ 199
Query: 341 KDPRARLTAAQALSHP 356
KDP R +A + L H
Sbjct: 200 KDPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 5e-57
Identities = 92/264 (34%), Positives = 138/264 (52%), Gaps = 16/264 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + +G G FG Y A K G VA+K I+ E + E++IL+ H
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE---KKEKIINEIQILKKCK-HP 57
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK+Y ++ + ++I ME C GG L D +L + TE A V +++L+ +L
Sbjct: 58 NIVKYYGSYLKKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVCKELLK--GLEYL 114
Query: 218 H--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H G++HRD+K N L S D +K DFGLS + K +VG+ Y++APEV+
Sbjct: 115 HSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING 171
Query: 276 KS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
K ++D+WS+G IT I L G+ P+ + ++ N P R P S+ KD
Sbjct: 172 KPYDYKADIWSLG-ITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKW-SDEFKD 229
Query: 334 FVKKLLVKDPRARLTAAQALSHPW 357
F+KK L K+P R TA Q L HP+
Sbjct: 230 FLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 5e-57
Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 17/260 (6%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + K G A+K ++K K+I VE E IL + H +VK +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVH 222
AF+ + +Y+ +E GGEL + K+ R++E+ A +++ +A E H G+++
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHL--SKEGRFSEERARFYAAEIV-LALEYLHSLGIIY 116
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+KPEN L D +K TDFGL+ + G + G+ Y+APEVL K G
Sbjct: 117 RDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKA 173
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D WS+GV+ Y +L G+ PF+ + I++++L++ F P +S A+D + LL
Sbjct: 174 VDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF---P-EFLSPEARDLISGLLQ 229
Query: 341 KDPRARLTAAQA---LSHPW 357
KDP RL + A +HP+
Sbjct: 230 KDPTKRLGSGGAEEIKAHPF 249
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 2e-54
Identities = 97/268 (36%), Positives = 139/268 (51%), Gaps = 20/268 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G L+G G FG Y + GD VA+K+I K I A++ + +E+ +L+ L H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLK-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK+ + E + +YI +E E G L I KK + E AV V Q+L+ A H
Sbjct: 59 PNIVKYIGSIETSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVYVYQVLQGLAYLH 116
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
G++HRD+K N L +D +K DFG++ K +VG+ Y++APEV+
Sbjct: 117 EQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVI-E 172
Query: 276 KSGP--ESDVWSIGVITYI-LLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPS-ISNS 330
SG SD+WS+G T I LL G P++D F+ V + P P P IS
Sbjct: 173 MSGASTASDIWSLG-CTVIELLTGNPPYYDLNPMAALFRIVQDDHP-----PLPEGISPE 226
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
KDF+ + KDP R TA Q L HPW+
Sbjct: 227 LKDFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 183 bits (468), Expect = 3e-54
Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 32/274 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y I K +G G FG Y+ K++G +K+I+ + M ED EVKIL+ L H
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLN-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAE 214
N++K+Y +FE+ + I ME +GG+L +I +K + E+ Q+ A
Sbjct: 59 PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL--CLAL 116
Query: 215 CHLHG--LVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-------IVGS 264
+LH ++HRD+KP+N FL + +K DFG+S K +VG+
Sbjct: 117 KYLHSRKILHRDIKPQNIFLTS----NGLVKLGDFGIS------KVLSSTVDLAKTVVGT 166
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
YY++PE+ + K +SD+WS+G + Y L + PF + + ++L+ + P
Sbjct: 167 PYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PP 222
Query: 324 WPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PS S+ ++ V LL KDP R + AQ L P
Sbjct: 223 IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 4e-54
Identities = 89/271 (32%), Positives = 144/271 (53%), Gaps = 20/271 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+T G+LLG G FG Y+A DK G+ +AVK +E + +E ++RE++IL +L H
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-H 58
Query: 157 ENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
N+V++Y + E+ N + I +E GG L + KK + E RQ+L A
Sbjct: 59 PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLAY 116
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H +G+VHRD+K N L S D +K DFG + I+ G+ + G+ Y++APE
Sbjct: 117 LHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPE 173
Query: 272 VLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNKPDFRRKPWPS-I 327
V++ + G +D+WS+G + G+ P+ + ++K +P P +
Sbjct: 174 VIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPP----EIPEHL 229
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S AKDF++K L +DP+ R TA + L HP++
Sbjct: 230 SEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 181 bits (459), Expect = 8e-52
Identities = 99/366 (27%), Positives = 155/366 (42%), Gaps = 27/366 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG Y+A D+ VA+K + K VE RE++IL +L
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECH 216
N+VK Y+ F+D+ +Y+ ME +GG L D + +E +A ++ Q+L H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVA 269
G++HRD+KPEN L + +K DFGL+ + VG+ Y+A
Sbjct: 119 SKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 270 PEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN---------K 316
PEVL + SD+WS+G+ Y LL G PF + + L+
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 376
IS +A D +KKLL KDP+ RL+++ LSH + D+ ++
Sbjct: 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDD 296
Query: 377 -MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 435
+ + + +L S L D + ++ NG S +L
Sbjct: 297 SAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTA 356
Query: 436 WKLKES 441
+ S
Sbjct: 357 SSKRSS 362
|
Length = 384 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 6e-51
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 27/267 (10%)
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G +G ++A K+ GD A+K I+K MI V+ V E IL A VVK Y +F
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILS-QAQSPYVVKLYYSF 62
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
+ +Y+ ME GG+L L + E A + + +++ H +G++HRD+K
Sbjct: 63 QGKKNLYLVMEYLPGGDL--ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120
Query: 227 PENFLFKSAKEDSSLKATDFGLSDF---------IKPGKKFQDIVGSAYYVAPEVLKRKS 277
P+N L S + LK TDFGLS K+ + IVG+ Y+APEV+ +
Sbjct: 121 PDNILIDS---NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG 177
Query: 278 -GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS---ISNSAKD 333
D WS+G I Y L G PF +T + IF+ +L K WP +S+ A D
Sbjct: 178 HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK-----IEWPEDVEVSDEAID 232
Query: 334 FVKKLLVKDPRARLTAA---QALSHPW 357
+ KLLV DP RL A + +HP+
Sbjct: 233 LISKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 2e-46
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-----EVKILQALA 154
K+LG G G Y K G A+KKI + ++ R E+K L++
Sbjct: 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKI-------HVDGDEEFRKQLLRELKTLRS-C 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
VVK Y AF + + I +E +GG L D L KK + E A + RQ+L+
Sbjct: 57 ESPYVVKCYGAFYKEGEISIVLEYMDGGSLAD--LLKKVGKIPEPVLAYIARQILKGLD- 113
Query: 215 CHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAP 270
+LH ++HRD+KP N L S E +K DFG+S ++ + VG+ Y++P
Sbjct: 114 -YLHTKRHIIHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCNTFVGTVTYMSP 169
Query: 271 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--I 327
E ++ +S +D+WS+G+ G+ PF F E+++ D P+
Sbjct: 170 ERIQGESYSYAADIWSLGLTLLECALGKFPF-LPPGQPSFFELMQAICDGPPPSLPAEEF 228
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S +DF+ L KDP+ R +AA+ L HP++++
Sbjct: 229 SPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-44
Identities = 85/270 (31%), Positives = 138/270 (51%), Gaps = 18/270 (6%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G G Y ATD+A G VA+KK+ K E + E+ I++ H N+V
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMRLRKQNK------ELIINEILIMKDCK-HPNIVD 79
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+Y+++ + +++ ME +GG L D I+ + R E A V R++L+ H ++
Sbjct: 80 YYDSYLVGDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GP 279
HRD+K +N L D S+K DFG + + K K +VG+ Y++APEV+KRK GP
Sbjct: 139 HRDIKSDNILLSK---DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGP 195
Query: 280 ESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
+ D+WS+G++ + G P+ + +F + P + S KDF+ K
Sbjct: 196 KVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP--EKWSPEFKDFLNKC 253
Query: 339 LVKDPRARLTAAQALSHPWVREGGDASEIP 368
LVKDP R +A + L HP++++ E
Sbjct: 254 LVKDPEKRPSAEELLQHPFLKKACPKEEFA 283
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-44
Identities = 91/272 (33%), Positives = 138/272 (50%), Gaps = 24/272 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ K LG G FG + K +G A+K + K K++ VE V E +ILQ++ H
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V Y +F+DD+ +Y+ ME GGEL + +K R+ E A Q++ +A E +L
Sbjct: 62 FLVNLYGSFQDDSNLYLVMEYVPGGELFSHL--RKSGRFPEPVARFYAAQVV-LALE-YL 117
Query: 218 H--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H +V+RD+KPEN L S D +K TDFG + +K + G+ Y+APE++
Sbjct: 118 HSLDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT--YTLCGTPEYLAPEIILS 172
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKD 333
K G D W++G++ Y +L G PF+D I++++L K F PS S AKD
Sbjct: 173 KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF-----PSFFSPDAKD 227
Query: 334 FVKKLLVKDPRARL-----TAAQALSHPWVRE 360
++ LL D RL +HPW
Sbjct: 228 LIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 9e-44
Identities = 90/292 (30%), Positives = 132/292 (45%), Gaps = 39/292 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +G G G + A D+ G+ VA+KK+ ++ I RE+K LQA H
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIP-NQALREIKALQAC-QH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
VVK + F + + ME L +L ++ E +R +L+ A H
Sbjct: 59 PYVVKLLDVFPHGSGFVLVMEYMPSD--LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH 116
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVL- 273
+G++HRD+KP N L + D LK DFGL+ + V + +Y APE+L
Sbjct: 117 ANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173
Query: 274 -KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV----------LRNKP 317
RK P D+W++G I LL G P + D +F+ + L + P
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNGS-PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232
Query: 318 DF--------RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
D+ + P P S A D +K LLV DP RL+AA+AL HP+
Sbjct: 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 1e-43
Identities = 95/296 (32%), Positives = 134/296 (45%), Gaps = 47/296 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM------ILPIAVEDVKREVKIL 150
RY GK LG G + Y A DK G VA+KKI+ + I A+ RE+K+L
Sbjct: 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTAL----REIKLL 56
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
Q L H N++ + F + + + E E L++++ K T D + LR
Sbjct: 57 QELK-HPNIIGLLDVFGHKSNINLVFEFMETD--LEKVIKDKSIVLTPADIKSYMLMTLR 113
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 269
H + ++HRD+KP N L S D LK DFGL+ F P +K V + +Y A
Sbjct: 114 GLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPNRKMTHQVVTRWYRA 170
Query: 270 PEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEVL-----RNKP 317
PE+L R G D+WS+G I + L R PF D IF E L N P
Sbjct: 171 PELLFGARHYGVGVDMWSVGCI-FAELLLRVPFLPGDSDIDQLGKIF-EALGTPTEENWP 228
Query: 318 DFRRKP----------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P +P+ S+ A D +++LL +P R+TA QAL HP+
Sbjct: 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 1e-42
Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 40/283 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
R+ G +G G FG Y A + G+ +AVK +I+ N P ++++ E+K+L+ L
Sbjct: 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLK 57
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR----QMLR 210
H N+VK+Y VYI ME C GG L + +L + V+R Q+L
Sbjct: 58 -HPNLVKYYGVEVHREKVYIFMEYCSGGTL-EELL-----EHGRILDEHVIRVYTLQLLE 110
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-----GKKFQDIVGSA 265
A H HG+VHRD+KP N + +K DFG + +K G++ Q + G+
Sbjct: 111 GLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTP 167
Query: 266 YYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPD 318
Y+APEV+ G +D+WS+G + + G+RP W + ++ +F +KP
Sbjct: 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSELDNEFQIMFHVGAGHKP- 225
Query: 319 FRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
P P +S KDF+ + L DP+ R TA++ L HP+V
Sbjct: 226 ----PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 5e-42
Identities = 88/266 (33%), Positives = 132/266 (49%), Gaps = 20/266 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K + G FG Y+A ++ GD A+K ++K+ MI V +VK E I+ V K
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 162 FYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH- 218
Y +F+ +Y+Y+ ME GG+ L + L + ++ A VV + E LH
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVV-----LGVE-DLHQ 115
Query: 219 -GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G++HRD+KPEN L + LK TDFGLS KKF VG+ Y+APE +
Sbjct: 116 RGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLENKKF---VGTPDYLAPETILGVG 169
Query: 278 GPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ SD WS+G + + L G PF +T D +F +L + ++ + S A D +
Sbjct: 170 DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLIN 229
Query: 337 KLLVKDPRARLTA---AQALSHPWVR 359
+LL DP RL A + SHP+ +
Sbjct: 230 RLLCMDPAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 1e-41
Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + K+ A+K ++K ++ E + E +IL+ H +VK Y
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLY 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
F+D Y+Y+ ME C GGEL IL + + E A + ++ H G+++R
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWT-ILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYR 117
Query: 224 DMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
D+KPEN L DS+ +K DFG + +K G+K G+ YVAPE++ K
Sbjct: 118 DLKPENLLL-----DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFS 172
Query: 281 SDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKK 337
D WS+G++ Y LL GR PF + ED I+ ++L+ +P+ I +AKD +K+
Sbjct: 173 VDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE---FPNYIDKAAKDLIKQ 229
Query: 338 LLVKDPRARLTAAQA-----LSHPW 357
LL ++P RL + H W
Sbjct: 230 LLRRNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 1e-40
Identities = 97/295 (32%), Positives = 143/295 (48%), Gaps = 48/295 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK-------MILPIAVEDVKREVKIL 150
Y + K LG G FG Y+A +K G+ VA+KK+ K K M L REVK L
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNL--------REVKSL 51
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ L H N+VK F +++ +Y E E G L + +K ++E ++ Q+L+
Sbjct: 52 RKLNEHPNIVKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKPFSESVIRSIIYQILQ 110
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
A H HG HRD+KPEN L + +K DFGL+ I+ + D V + +Y AP
Sbjct: 111 GLAHIHKHGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTRWYRAP 167
Query: 271 EVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL-----RNKPD-- 318
E+L R + S D+W++G I L R F +E D ++K VL ++ P+
Sbjct: 168 EILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGY 227
Query: 319 -------FR---------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
FR + P+ S A D +K +L DP+ R TA+QAL HP+
Sbjct: 228 KLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-40
Identities = 89/293 (30%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K++G G FG ++ DK G A+K + K+ MI + V+ E IL A A
Sbjct: 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL-ADADS 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+VK Y +F+D+ ++Y+ ME GG+L+ +L +KD + E+ A + +++ H
Sbjct: 61 PWIVKLYYSFQDEEHLYLVMEYMPGGDLM-NLLIRKD-VFPEETARFYIAELVLALDSVH 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD--------------- 260
G +HRD+KP+N L D +K DFGL K +
Sbjct: 119 KLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV 175
Query: 261 --------------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 305
VG+ Y+APEVL+ G E D WS+GVI Y +L G PF+ T
Sbjct: 176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235
Query: 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPW 357
+ +++ K R P P +S A D + +LL DP RL + + SHP+
Sbjct: 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 2e-40
Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPI-AVEDVKREVKILQALA 154
Y + LG G +G Y A DK G+ VA+KKI + +P A+ RE+ +L+ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTAL----REISLLKELK 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+VK + + +Y+ E C+ L + L K+ + ++ Q+LR A
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD--MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAY 113
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
CH H ++HRD+KP+N L D LK DFGL+ F P + + V + +Y APE+L
Sbjct: 114 CHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEIL 170
Query: 274 --KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL--------------- 313
+ D+WS+G I ++ G+ F +E D +FK ++L
Sbjct: 171 LGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230
Query: 314 ---RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P F K P + D + K+L +P R++A +AL HP+
Sbjct: 231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-39
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G Y A N ++VA+K+I+ K +V+++++EV+ + H
Sbjct: 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCN-HP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECH 216
NVVK+Y +F + +++ M GG LLD + + E A V++++L+ H
Sbjct: 60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPG----KKFQDIVGSAYYVAPE 271
+G +HRD+K N L ED S+K DFG+S + G K + VG+ ++APE
Sbjct: 120 SNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE 176
Query: 272 VLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKP-----DFRRKP 323
V+++ G ++D+WS G IT I L G P+ + L+N P K
Sbjct: 177 VMEQVHGYDFKADIWSFG-ITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKK 235
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ S S + + L KDP R TA + L H
Sbjct: 236 Y---SKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 4e-39
Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 48/295 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALA 154
Y +G G +G Y A DK G+ VA+KKI +++ I A+ RE+K+L+ L
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTAL----REIKLLKELN 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVA 212
H N++K + F +Y+ E + L +++ KD + E + Q+L+
Sbjct: 57 -HPNIIKLLDVFRHKGDLYLVFEFMD--TDLYKLI--KDRQRGLPESLIKSYLYQLLQGL 111
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
A CH HG++HRD+KPEN L + LK DFGL+ F P + + V + +Y APE
Sbjct: 112 AFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPE 168
Query: 272 VLKRKS--GPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL------------ 313
+L D+WS+G I LL RRP + D +FK L
Sbjct: 169 LLLGDKGYSTPVDIWSVGCIFAELL-SRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227
Query: 314 -------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ P P P+ S A D + ++L DP R+TA QAL+HP+
Sbjct: 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 7e-39
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 66/321 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK-------NKMILPIAVEDVKREVKI 149
RY + K +G G +G A DK G +VA+KKI K IL RE+K+
Sbjct: 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRIL--------REIKL 52
Query: 150 LQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
L+ L HEN++ + ED N VYI EL E L +++ K T+
Sbjct: 53 LRHLR-HENIIGLLDILRPPSPEDFNDVYIVTELMETD--LHKVI-KSPQPLTDDHIQYF 108
Query: 205 VRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI- 261
+ Q+LR +LH ++HRD+KP N L + LK DFGL+ + P + +
Sbjct: 109 LYQILR--GLKYLHSANVIHRDLKPSNIL---VNSNCDLKICDFGLARGVDPDEDEKGFL 163
Query: 262 ---VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF---------WDK---- 303
V + +Y APE+L + D+WS+G I LL R+P +
Sbjct: 164 TEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPLFPGRDYIDQLNLIVEV 222
Query: 304 ----TEDGI-------FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLT 348
+E+ + + L++ P +KP P S A D ++K+LV DP+ R+T
Sbjct: 223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT 282
Query: 349 AAQALSHPWVREGGDASEIPI 369
A +AL+HP++ + D + P+
Sbjct: 283 ADEALAHPYLAQLHDPEDEPV 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 4e-38
Identities = 89/298 (29%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKK---IEKNKMILPIAVEDVKREVKILQAL 153
+Y + ++G G +G +KA G+ VA+KK E ++ + A+ REVK+L+ L
Sbjct: 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTAL----REVKVLRQL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
HEN+V AF +Y+ E E ELL+ + Q+L+
Sbjct: 58 R-HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRS----YIWQLLQA 112
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGSAYYVA 269
A CH H ++HRD+KPEN L E LK DFG + + +P D V + +Y A
Sbjct: 113 IAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTDYVATRWYRA 169
Query: 270 PEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK-------------EVL 313
PE+L G DVW+IG I LL G F ++ D ++ E+
Sbjct: 170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229
Query: 314 RNKPDFRRKPWPSI--------------SNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ P F +P S+ A DF+K L DP+ RLT + L HP+
Sbjct: 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 5e-38
Identities = 85/269 (31%), Positives = 147/269 (54%), Gaps = 19/269 (7%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +ATDK+ G +VAVKK++ K E + EV I++ H N+V+ Y
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HPNIVEMY 82
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 83 SSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHR 139
Query: 224 DMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
D+K ++ L S D +K +DFG +S + P +K +VG+ Y++APEV+ R G
Sbjct: 140 DIKSDSILLTS---DGRVKLSDFGFCAQVSKEV-PRRK--SLVGTPYWMAPEVISRLPYG 193
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
E D+WS+G++ ++ G P++++ K + N P + +S + F+ ++
Sbjct: 194 TEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL-HKVSPRLRSFLDRM 252
Query: 339 LVKDPRARLTAAQALSHPWVREGGDASEI 367
LV+DP R TAA+ L+HP++ + G S I
Sbjct: 253 LVRDPAQRATAAELLNHPFLAKAGPPSSI 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 7e-38
Identities = 87/272 (31%), Positives = 138/272 (50%), Gaps = 24/272 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
R+ G+LLG G FG Y + +GD AVK + + AV+ +++E+ +L L
Sbjct: 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V++ +++ +YI +EL GG L ++L K S + E + RQ+L
Sbjct: 61 -HPNIVQYLGTEREEDNLYIFLELVPGGSLA-KLLKKYGS-FPEPVIRLYTRQILLGLEY 117
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H VHRD+K N L + + +K DFG++ + + GS Y++APEV+
Sbjct: 118 LHDRNTVHRDIKGANILVDT---NGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIA 174
Query: 275 RKS--GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSI--- 327
++ G +D+WS+G T + + +P W + E +FK R K P I
Sbjct: 175 QQGGYGLAADIWSLGC-TVLEMATGKPPWSQLEGVAAVFKIG-------RSKELPPIPDH 226
Query: 328 -SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S+ AKDF+ K L +DP R TAA+ L HP+V
Sbjct: 227 LSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 7e-38
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F+ IGK G FG + + A+K + K K + +V +V E +ILQ L
Sbjct: 2 FELLRVIGK----GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H +V + +F+D+ +Y+ ++L GG+L + K +++E+ + +++
Sbjct: 58 N-HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALE 114
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H G++HRD+KP+N L E + TDF ++ + P G+ Y+APEVL
Sbjct: 115 YLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVL 171
Query: 274 KRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPSISN 329
R+ D WS+GV Y L G+RP+ + D I + + + S
Sbjct: 172 CRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLY----PATWST 227
Query: 330 SAKDFVKKLLVKDPRARL--TAAQALSHPW 357
A D + KLL +DP+ RL +HP+
Sbjct: 228 EAIDAINKLLERDPQKRLGDNLKDLKNHPY 257
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 1e-37
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 15/285 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+T+ + +G G FG Y A DK VA+K I+ + I ED+++E++ L
Sbjct: 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEI--EDIQQEIQFLSQCRS- 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC- 215
+ K+Y +F + ++I ME C GG LD + K + E A ++R++L E
Sbjct: 59 PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL---KPGKLDETYIAFILREVLL-GLEYL 114
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLK 274
H G +HRD+K N L E+ +K DFG+S + K VG+ +++APEV+K
Sbjct: 115 HEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIK 171
Query: 275 RKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ E +D+WS+G+ L G P D + + +N P S KD
Sbjct: 172 QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--SLEGNKFSKPFKD 229
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 378
FV L KDP+ R +A + L H ++++ S + + I + +
Sbjct: 230 FVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 3e-36
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 53/299 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G G ++ K G A+K ++K +MI V+ V E +IL L H +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPT 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD----AAVVVRQMLRVAAE-CH 216
Y +F+ + Y+ + M+ C GGEL + + +E+ AA V+ +A E H
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVL-----LALEYLH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--------------------------- 249
L G+V+RD+KPEN L E + +DF LS
Sbjct: 121 LLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIP 177
Query: 250 -DFIK--PGKKFQDIVGSAYYVAPEVLKRKSGPESDV--WSIGVITYILLCGRRPFWDKT 304
+ P + VG+ Y+APEV+ G S V W++G++ Y +L G PF
Sbjct: 178 SETFSEEPSFRSNSFVGTEEYIAPEVIS-GDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVR 359
D F +L+ + F P +S+SA+D ++KLLVKDP RL AA+ HP+ R
Sbjct: 237 RDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-35
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G ++A K G+ VA+K+++K+ + V V E IL E +VK
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDIL-TTTKSEWLVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
AF+DD Y+Y+AME GG+ R L +E A + +M H G +HR
Sbjct: 68 YAFQDDEYLYLAMEYVPGGDF--RTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHR 125
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESD 282
D+KPENFL + +K TDFGLS I +VGS Y+APEVL+ + D
Sbjct: 126 DLKPENFLIDA---SGHIKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDFTVD 180
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----KPWPSISNSAKDFVKKL 338
WS+G + Y LCG PF T + ++ + K +R P ++S+ A D + KL
Sbjct: 181 YWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKL 240
Query: 339 LVKDPRARLTAAQAL-SHPWVRE 360
+ DP R + + + +HP+ +E
Sbjct: 241 I-NDPSRRFGSLEDIKNHPFFKE 262
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 3e-35
Identities = 96/275 (34%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A K G A K I+ +ED E+ IL + H N+V Y
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDIL-SECKHPNIVGLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A+ +N ++I +E C+GG L D I+ + + TE V RQML H H ++HR
Sbjct: 69 EAYFYENKLWILIEFCDGGAL-DSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-IVGSAYYVAPEVL---KRKSGP 279
D+K N L D +K DFG+S K + +D +G+ Y++APEV+ K P
Sbjct: 128 DLKAGNILLTL---DGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNP 184
Query: 280 ---ESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNKPDFRRKP--WPSISNSAK 332
++D+WS+G IT I L P + + K +L+++P +P W S+S
Sbjct: 185 YDYKADIWSLG-ITLIELAQMEPPHHELNPMRVLLK-ILKSEPPTLDQPSKW---SSSFN 239
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
DF+K LVKDP R TAA+ L HP+V + D I
Sbjct: 240 DFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 3e-35
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 41/277 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G +G Y A K G VA+K + + ++++ +E+ IL+
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQ-CDSP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+VK+Y ++ + ++I ME C G + D I+ + TE++ A ++ Q L+ H
Sbjct: 59 YIVKYYGSYFKNTDLWIVMEYCGAGSVSD-IMKITNKTLTEEEIAAILYQTLKGLEYLHS 117
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ +HRD+K N L E+ K DFG+S K ++G+ +++APEV++ +
Sbjct: 118 NKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQ-E 173
Query: 277 SGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR------RKPWPSI 327
G + D+WS+G IT I + G+ P + R KP P++
Sbjct: 174 IGYNNKADIWSLG-ITAIEMAEGKPP-------------YSDIHPMRAIFMIPNKPPPTL 219
Query: 328 SNSAK------DFVKKLLVKDPRARLTAAQALSHPWV 358
S+ K DFVKK LVKDP R +A Q L HP++
Sbjct: 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 133 bits (335), Expect = 5e-35
Identities = 91/277 (32%), Positives = 151/277 (54%), Gaps = 14/277 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT K++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLKALSVLHAQGVIHR 140
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 141 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEV 197
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P + K +S S K F+ +LLV+
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDRLLVR 256
Query: 342 DPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 378
DP R TAA+ L HP++ + G S I + + N MR
Sbjct: 257 DPAQRATAAELLKHPFLAKAGPPSCI-VPLMRQNRMR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 5e-35
Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A +K G+ VA+KKI E K PI RE+K+LQ L H N+V+
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITA---IREIKLLQKL-RHPNIVR 62
Query: 162 FYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
+ +Y+ E + L +L + ++TE ++Q+L H +G
Sbjct: 63 LKEIVTSKGKGSIYMVFEYMDHD--LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG 120
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVL--KR 275
++HRD+K N L + D LK DFGL+ + + V + +Y PE+L
Sbjct: 121 ILHRDIKGSNILINN---DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGAT 177
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----------LRNKPDFR- 320
+ GPE D+WS+G I L G+ F TE + IF+ + P F
Sbjct: 178 RYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237
Query: 321 ---RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+KP+ I SA D + KLL DP+ R++A QAL H +
Sbjct: 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 5e-35
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + +++G G +G Y A K G VA+K ++ I+ E++K E IL+ + H
Sbjct: 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMD----IIEDEEEEIKEEYNILRKYSNH 62
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLD--RILAKKDSRYTEKDAAVVVRQM 208
N+ FY AF +D+ +++ MELC GG + D + L KK R E+ A ++R+
Sbjct: 63 PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET 122
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 267
LR A H + ++HRD+K +N L +++ +K DFG+S + +G+ Y+
Sbjct: 123 LRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYW 179
Query: 268 VAPEVLKRKSGPE------SDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 320
+APEV+ P+ SDVWS+G IT I L G+ P D ++ RN P
Sbjct: 180 MAPEVIACDEQPDASYDARSDVWSLG-ITAIELADGKPPLCDMHPMRALFKIPRNPPPTL 238
Query: 321 RKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ P W S DF+ + L+K+ R + L HP++
Sbjct: 239 KSPENW---SKKFNDFISECLIKNYEQRPFMEELLEHPFI 275
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 4e-34
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D +R T+G G FG ++ D+ + A+K + ++I + V E ++L+
Sbjct: 2 DLERIKTVGT----GTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE 57
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
++ H +++ + D ++Y+ ME GGEL + R++ +++
Sbjct: 58 VS-HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCAL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----IVGSAYYV 268
H +V+RD+KPEN L + +K TDFG + KK +D + G+ Y+
Sbjct: 115 EYLHSKEIVYRDLKPENILLDK---EGHIKLTDFGFA------KKLRDRTWTLCGTPEYL 165
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
APEV++ K D W++G++ Y +L G PF+D GI++++L K +F R +
Sbjct: 166 APEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HL 221
Query: 328 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 359
AKD +KKLLV D RL A +H W +
Sbjct: 222 DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 3e-33
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + + +G G +G Y A D A G+ VA+K I K+ E +++E+ +L+ H
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKE-CRH 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V ++ ++ + ++I ME C GG L D I +E A V R+ L+ A H
Sbjct: 60 PNIVAYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGLAYLH 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL-- 273
G +HRD+K N L ED +K DFG+S + K + +G+ Y++APEV
Sbjct: 119 ETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAV 175
Query: 274 KRKSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
+RK G + D+W++G IT I L + P +D L P P + +
Sbjct: 176 ERKGGYDGKCDIWALG-ITAIELAELQPPMFDLHP----MRALFLISKSNFPP-PKLKDK 229
Query: 331 AK------DFVKKLLVKDPRARLTAAQALSHP 356
K DF+KK L KDP+ R TA + L HP
Sbjct: 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 127 bits (319), Expect = 7e-33
Identities = 86/266 (32%), Positives = 143/266 (53%), Gaps = 13/266 (4%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT+K G +VAVKK++ K E + EV I++ HENVV Y
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYH-HENVVDMY 85
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +LR + H G++HR
Sbjct: 86 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHR 142
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPES 281
D+K ++ L S D +K +DFG + K K + +VG+ Y++APEV+ R G E
Sbjct: 143 DIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEV 199
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ + + N P R K +S+ + F+ +LV+
Sbjct: 200 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-RVKDSHKVSSVLRGFLDLMLVR 258
Query: 342 DPRARLTAAQALSHPWVREGGDASEI 367
+P R TA + L HP+++ G S I
Sbjct: 259 EPSQRATAQELLQHPFLKLAGPPSCI 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 128 bits (322), Expect = 9e-33
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 30/297 (10%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
KDFD + +G+ G FG V +KA GD A+K ++K+ ++ V + E IL
Sbjct: 1 KDFDVKSLVGR----GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL- 55
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+++ + + AF+D + +Y+ ME GG+LL +L + + ++ E A + +++
Sbjct: 56 SISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLS-LLNRYEDQFDEDMAQFYLAELVLA 114
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVA 269
H G VHRD+KPEN L +K DFG + + K VG+ Y+A
Sbjct: 115 IHSVHQMGYVHRDIKPENVLIDRT---GHIKLADFGSAARLTANKMVNSKLPVGTPDYIA 171
Query: 270 PEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
PEVL K G E D WS+GVI Y ++ GR PF + T + ++ + +
Sbjct: 172 PEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP 231
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 379
P +S+ D ++ LL + RL HP+ S+I NN+R
Sbjct: 232 EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF------SKID-----WNNIRN 276
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 6e-32
Identities = 89/275 (32%), Positives = 129/275 (46%), Gaps = 43/275 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAGHE 157
LG G G + G +AVK I K IL RE+ IL
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQIL--------RELDILHK-CNSP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH- 216
+V FY AF ++ + I ME +GG LD+IL + R E+ + +L+ H
Sbjct: 60 YIVGFYGAFYNNGDISICMEYMDGGS-LDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEV 272
H ++HRD+KP N L S + +K DFG+S G+ + VG++ Y+APE
Sbjct: 119 KHKIIHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPE- 169
Query: 273 LKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLR---NKPDFRRKP 323
R G +SD+WS+G+ L GR P+ + DGIF E+L+ N+P R P
Sbjct: 170 --RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF-ELLQYIVNEPP-PRLP 225
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S +DFV L+KDPR R + + L HP++
Sbjct: 226 SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ IGK G FG + KA+ A+K+I+ +KM E + E ++L
Sbjct: 1 DFEILNKIGK----GSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI-DEARVLAK 55
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L ++++Y +F D + I ME E G+L + ++ E Q+L
Sbjct: 56 L-DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPE 271
A H ++HRD+K N ++K D G++ + F IVG+ YY++PE
Sbjct: 115 AHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPE 171
Query: 272 VLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISN 329
+ + K E SDVW++GV+ Y G+ PF + + +++R P S
Sbjct: 172 LCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG----VFPPVSQMYSQ 227
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHP 356
+ + L KD R R Q L +P
Sbjct: 228 QLAQLIDQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-31
Identities = 87/286 (30%), Positives = 145/286 (50%), Gaps = 43/286 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE-----------KNKMILPIAVEDVKR 145
++ G L+G G FG Y+ + ++G+ +AVK++E K M+ + + R
Sbjct: 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSML-----DALAR 55
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE---LLDRILAKKDSRYTEKDAA 202
E+ +L+ L HEN+V++ + D +++ I +E GG LL+ A + E
Sbjct: 56 EIALLKELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA-----FEETLVR 109
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPG 255
VRQ+L+ H G++HRD+K N L + +K +DFG+S + K
Sbjct: 110 NFVRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKKLEANSLSTKTN 166
Query: 256 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVL 313
+ GS +++APEV+K+ S ++D+WS+G + +L G+ PF D T+ IFK
Sbjct: 167 GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226
Query: 314 RNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
P+ PS IS+ A DF++K D R TAA+ L HP++
Sbjct: 227 NASPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-31
Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 19/267 (7%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAVEDVKREVKILQALAGHEN 158
GKLLG G FG Y+ D G +AVK++ + V ++ E+++L+ L HE
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HER 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V++Y DD + I ME GG + D++ K TE RQ+L H +
Sbjct: 66 IVQYYGCLRDDETLSIFMEYMPGGSVKDQL--KAYGALTETVTRKYTRQILEGVEYLHSN 123
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLK 274
+VHRD+K N L SA ++K DFG S ++ G + + G+ Y+++PEV+
Sbjct: 124 MIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS 180
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISNSA 331
+ G ++DVWS+G T + + +P W + E IFK + +P + P +S A
Sbjct: 181 GEGYGRKADVWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IATQPTNPQLP-SHVSPDA 236
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358
++F+++ V++ + R +A + L H +V
Sbjct: 237 RNFLRRTFVENAKKRPSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (309), Expect = 5e-31
Identities = 95/318 (29%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
+G+ LG G FG +A K G+ A+K ++K +++ V+ V +E IL L+ H +
Sbjct: 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFI 80
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH- 218
V +F+D+N VY +E GGEL + +K R+ D A L +A E +LH
Sbjct: 81 VNMMCSFQDENRVYFLLEFVVGGELFTHL--RKAGRFP-NDVAKFYHAELVLAFE-YLHS 136
Query: 219 -GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
+++RD+KPEN L + +K TDFG + + P + F + G+ Y+APEV++ K
Sbjct: 137 KDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKV-PDRTFT-LCGTPEYLAPEVIQSKG 191
Query: 278 -GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
G D W++GV+ Y + G PF+D T I++++L + F W A+D VK
Sbjct: 192 HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDLVK 247
Query: 337 KLLVKDPRARLTA-----AQALSHPWVREG--------GDASEIPIDISVLNNMRQFVKY 383
LL D RL A +HP+ + IP+ + + F KY
Sbjct: 248 GLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKY 307
Query: 384 SRLKQFALRALASTLDDE 401
L L + E
Sbjct: 308 PDSPVDRLPPLTAAQQAE 325
|
Length = 329 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 1e-30
Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKI 149
D ++YT + +G G G Y A D A G VA+K++ ++ K L I V RE K
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK- 74
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
H N+V + +++ + +++ ME GG L D + ++ E A V R+ L
Sbjct: 75 ------HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECL 125
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYV 268
+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y++
Sbjct: 126 QALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 182
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPS 326
APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ ++ P+ +
Sbjct: 183 APEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--EK 240
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L HP+++
Sbjct: 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-30
Identities = 82/276 (29%), Positives = 136/276 (49%), Gaps = 31/276 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-----EVKILQA 152
Y + + +G G FG K++G + K+I+ M + ++ EV IL+
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM------TEKEKQQLVSEVNILRE 55
Query: 153 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAV-VVRQM 208
L H N+V++Y+ D + +YI ME CEGG+L I KK+ +Y E++ ++ Q+
Sbjct: 56 LK-HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQL 114
Query: 209 LRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIV 262
L ECH + ++HRD+KP N +F A ++K DFGL+ + F + V
Sbjct: 115 LLALYECHNRSDPGNTVLHRDLKPAN-IFLDANN--NVKLGDFGLAKILGHDSSFAKTYV 171
Query: 263 GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
G+ YY++PE L +SD+WS+G + Y L PF + + + ++ K FRR
Sbjct: 172 GTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK--FRR 229
Query: 322 KPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 356
P S+ + +K +L DP R + + L P
Sbjct: 230 --IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 4e-30
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y ++LG G FG + + V K++ ++ D E+ IL L H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKER-RDALNEIVILSLLQ-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N++ +YN F DDN + I ME GG L D+I+ +K + E+ + Q++ + H
Sbjct: 59 PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH 118
Query: 217 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEV 272
G++HRD+K N FL K +K DFG+S G ++ + +VG+ YY++PE+
Sbjct: 119 KAGILHRDIKTLNIFLTK----AGLIKLGDFGISK--ILGSEYSMAETVVGTPYYMSPEL 172
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
+ +SD+W++G + Y LL +R F + + K V N P S+ +S
Sbjct: 173 CQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN-----YTPVVSVYSS 227
Query: 331 A-KDFVKKLLVKDPRARLTAAQALSHP 356
V LL +DP R TA + L P
Sbjct: 228 ELISLVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 4e-30
Identities = 80/261 (30%), Positives = 139/261 (53%), Gaps = 13/261 (4%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +A +K +G +VAVK ++ K E + EV I++ H+NVV+ Y
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQ-HQNVVEMY 84
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
++ +++ ME +GG L D + +R E+ A V +L+ H G++HR
Sbjct: 85 KSYLVGEELWVLMEFLQGGALTDIV---SQTRLNEEQIATVCESVLQALCYLHSQGVIHR 141
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG I K K + +VG+ Y++APEV+ R G E
Sbjct: 142 DIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEV 198
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++ + K LR+ P + K IS +DF++++L +
Sbjct: 199 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNAHKISPVLRDFLERMLTR 257
Query: 342 DPRARLTAAQALSHPWVREGG 362
+P+ R TA + L HP++ + G
Sbjct: 258 EPQERATAQELLDHPFLLQTG 278
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 5e-30
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 46/287 (16%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ TI KL+ +G +G Y+ K R A+KKI K +IL ++ V E IL
Sbjct: 2 DFE---TI-KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL-T 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGE---LLDRI--LAKKDSRYTEKDAAVVVRQ 207
A + VV + +FE ++ + ME EGG+ LL I L +R + + +
Sbjct: 57 FAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEY 116
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF--------------IK 253
+ H +G+VHRD+KP+N L S +K TDFGLS K
Sbjct: 117 L-------HNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLTTNLYEGHIEK 166
Query: 254 PGKKFQD--IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 310
++F D + G+ Y+APEV+ R+ G D W++G+I Y L G PF+ T + +F
Sbjct: 167 DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226
Query: 311 EVLRNKPDFRRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQAL 353
+V+ + + WP ++ A+D + +LL ++P RL A
Sbjct: 227 QVISDDIE-----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAF 268
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 7e-30
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ I K +G GQF Y A +G VA+KK++ +M+ A +D +E+ +L+ L
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-D 60
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAA 213
H NV+K+ +F ++N + I +EL + G+L I K+ E+ Q+
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEV 272
H ++HRD+KP N +F +A +K D GL F +VG+ YY++PE
Sbjct: 121 HMHSKRIMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177
Query: 273 LKRKSGPE--SDVWSIGVITYILLCGRRPFW-DKTE-DGIFKEVLRNKPDFRRKPWPSIS 328
+ ++G SD+WS+G + Y + + PF+ DK + K++ K D+ P S
Sbjct: 178 I-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EKCDYPPLPADHYS 234
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALS 354
+D V + + DP R + L
Sbjct: 235 EELRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 8e-30
Identities = 102/316 (32%), Positives = 150/316 (47%), Gaps = 49/316 (15%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
FG + RY + +G G FG A D+ G VA+KKI K P+ + RE+
Sbjct: 2 FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-PFSTPVLAKRTYREL 60
Query: 148 KILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD-AA 202
K+L+ L HEN++ F + ED +Y EL G L R+L SR EK
Sbjct: 61 KLLKHLR-HENIISLSDIFISPLED---IYFVTELL--GTDLHRLL---TSRPLEKQFIQ 111
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
+ Q+LR H G+VHRD+KP N L E+ LK DFGL+ P + V
Sbjct: 112 YFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQDP--QMTGYV 166
Query: 263 GSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVLRNKP 317
+ YY APE++ +K E D+WS G I +L G+ F K + I ++L P
Sbjct: 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226
Query: 318 DF------------------RRKPWP------SISNSAKDFVKKLLVKDPRARLTAAQAL 353
D +R+P P + SA D ++K+LV DP+ R++AA+AL
Sbjct: 227 DDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286
Query: 354 SHPWVREGGDASEIPI 369
+HP++ D ++ P+
Sbjct: 287 AHPYLAPYHDPTDEPV 302
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 4e-29
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 15/267 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AG 155
Y +L+G G +G Y G VA+K I N V D++REV +L L +
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKII--NLDTPDDDVSDIQREVALLSQLRQSQ 60
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
N+ K+Y ++ ++I ME EGG + R L K EK +V++R++L
Sbjct: 61 PPNITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKA-GPIAEKYISVIIREVLVALKYI 117
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 274
H G++HRD+K N L + ++K DFG++ + K VG+ Y++APEV+
Sbjct: 118 HKVGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVIT 174
Query: 275 --RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ ++D+WS+G+ Y + G P+ D + ++KP R S +
Sbjct: 175 EGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP--RLEDNGYSKLLR 232
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
+FV L ++P+ RL+A + L W++
Sbjct: 233 EFVAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 4e-29
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 47/230 (20%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
T+GK LG G FG VAVK ++++ +E+ RE +I++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDAS--EQQIEEFLREARIMRKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NVVK ++ +YI ME EGG+LL + + + + +L A +
Sbjct: 59 DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP--------KLSLSDLLSFALQ 110
Query: 215 -----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L +HRD+ N L E+ +K +DFGLS + YY
Sbjct: 111 IARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDD---------YY 158
Query: 268 V-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE LK K +SDVWS GV+ + I G +P+ +
Sbjct: 159 RKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMS 208
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-29
Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 23/278 (8%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D ++ +T + +GHG FG Y A D + VA+KK+ + +D+ +EV+
Sbjct: 9 SKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQ 207
LQ L H N +++ + ++ ++ ME C G ++L+ + KK + E + A +
Sbjct: 69 LQQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQ--EVEIAAICHG 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L+ A H H +HRD+K N L E ++K DFG + + P F VG+ Y+
Sbjct: 124 ALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSPANSF---VGTPYW 177
Query: 268 VAPEV-LKRKSGP---ESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFRR 321
+APEV L G + DVWS+G IT I L R+P F ++ + P
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSS 236
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
W S+ ++FV L K P+ R ++ + L H +V
Sbjct: 237 NDW---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 7e-29
Identities = 84/270 (31%), Positives = 137/270 (50%), Gaps = 24/270 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVV 160
K+LG G FG +A K + AVK ++K+ ++ VE E ++L ALAG H +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVL-ALAGKHPFLT 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA---AVVVRQMLRVAAECHL 217
+ ++ F+ + ++ ME GG+L+ I + R+ E A A + L+ H
Sbjct: 60 QLHSCFQTKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQF---LHE 114
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 276
G+++RD+K +N L S + +K DFG+ + I G G+ Y+APE+L +
Sbjct: 115 RGIIYRDLKLDNVLLDS---EGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQ 171
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GP D W++GV+ Y +L G+ PF ED +F+ +L ++ + R +S AK +
Sbjct: 172 PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKEAKSIL 227
Query: 336 KKLLVKDPRARL----TAAQAL-SHPWVRE 360
K L K+P RL T Q + HP+ RE
Sbjct: 228 KSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQA 152
Y +G G +G Y A D G VA+KK+ ++ L P++ RE+ +L+
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKV---RVPLSEEGIPLST---LREIALLKQ 54
Query: 153 L--AGHENVVKFYNAF---EDDNY--VYIAMELCEG--GELLDRILAKKDSRYTEKDAAV 203
L H N+V+ + D + + E + L + T KD
Sbjct: 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKD--- 111
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
++RQ+LR H H +VHRD+KP+N L S D +K DFGL+ +V
Sbjct: 112 LMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLARIYSFEMALTSVVV 168
Query: 264 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF-------- 309
+ +Y APEVL + S D+WS+G I L RRP + T + IF
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQLDKIFDVIGLPSE 227
Query: 310 ----KEVLRNKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ V + F P I D +KK+L +P R++A +AL HP+
Sbjct: 228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 94/327 (28%), Positives = 136/327 (41%), Gaps = 85/327 (25%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------ 144
DK R+Y I + LG G +G + A D+ + VA+KKI A +
Sbjct: 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFD-------AFRNATDAQRTF 54
Query: 145 REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
RE+ LQ L H N+VK N E+D +Y+ E Y E D
Sbjct: 55 REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFE------------------YMETDLH 96
Query: 203 VVVR--------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248
V+R Q+L+ H ++HRD+KP N L S D +K DFGL
Sbjct: 97 AVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGL 153
Query: 249 SDFIKPGKKFQ------DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 300
+ + ++ D V + +Y APE+L + D+WS+G I +L G+ F
Sbjct: 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLF 213
Query: 301 ----------------WDKTEDGI------FKE-VLRNKPDFRRKP----WPSISNSAKD 333
+ + I F +L + P RKP P S+ A D
Sbjct: 214 PGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALD 273
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVRE 360
+KKLLV +P RLTA +AL HP+V +
Sbjct: 274 LLKKLLVFNPNKRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 1e-28
Identities = 87/267 (32%), Positives = 131/267 (49%), Gaps = 22/267 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE-KNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG Y A +K G A K IE K++ L ED E++IL A H +VK
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYMVEIEIL-ATCNHPYIVKL 74
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
AF D ++I +E C GG + D I+ + D TE V+ RQML H ++H
Sbjct: 75 LGAFYWDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL---KRKSG 278
RD+K N L D +K DFG+S +K ++ +G+ Y++APEV+ K
Sbjct: 134 RDLKAGNVLL---TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDT 190
Query: 279 P---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKD 333
P ++D+WS+G+ + P + + ++ +++P +P W S +D
Sbjct: 191 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKW---SMEFRD 247
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVRE 360
F+K L K P R +AAQ L HP+V
Sbjct: 248 FLKTALDKHPETRPSAAQLLEHPFVSS 274
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 83/269 (30%), Positives = 139/269 (51%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHE 157
++LG G +G ++ D ++ K+ K I+ A E + E ++L+A+
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V + AF+ D +++ ++ GGEL + ++ +TE + V + ++ V A HL
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEI--VLALDHL 121
Query: 218 H--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVL 273
H G+++RD+K EN L S + + TDFGLS ++ + G+ Y+APEV+
Sbjct: 122 HQLGIIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVI 178
Query: 274 KRKSGPESDV---WSIGVITYILLCGRRPFWDKTEDG-------IFKEVLRNKPDFRRKP 323
+ SG WS+GV+T+ LL G PF T DG I + +L++KP F
Sbjct: 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPF---TVDGEQNSQSEISRRILKSKPPFP--- 232
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQA 352
++S A+DF++KLL KDP+ RL A A
Sbjct: 233 -KTMSAEARDFIQKLLEKDPKKRLGANGA 260
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 89/294 (30%), Positives = 130/294 (44%), Gaps = 33/294 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G G K G A+K I P + + RE++I ++ +VK+Y
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTI--TTDPNPDLQKQILRELEINKSCK-SPYIVKYY 65
Query: 164 NAF--EDDNYVYIAMELCEGGELLDRI---LAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
AF E + + IAME CEGG L D I + K+ R EK + +L+ + H
Sbjct: 66 GAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR 124
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
++HRD+KP N L +K DFG+S + + G+++Y+APE ++ K
Sbjct: 125 KIIHRDIKPSNILLT---RKGQVKLCDFGVSGELVNSLAG--TFTGTSFYMAPERIQGKP 179
Query: 278 -GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLR---NKPDFRRKPWPSI----S 328
SDVWS+G+ + R PF + E+L N P+ K P S
Sbjct: 180 YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWS 239
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382
KDF+K+ L KDP R T L HPW++ A NM +FV
Sbjct: 240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK----AQMKKK-----VNMAKFVA 284
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 2e-28
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 54/317 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-AVEDVK---REVK 148
+ RY +G G +G A D G +VA+KK+ + P + K RE++
Sbjct: 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSR-----PFQSAIHAKRTYRELR 66
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+L+ + HENV+ + F ED VY+ L G L+ I+ K + ++
Sbjct: 67 LLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHLM--GADLNNIV--KCQKLSDDHIQ 121
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
+V Q+LR H G++HRD+KP N + ED LK DFGL+ + V
Sbjct: 122 FLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLAR--HTDDEMTGYV 176
Query: 263 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR----------------------- 297
+ +Y APE++ D+WS+G I LL G+
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236
Query: 298 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQAL 353
K + +++ P +K + + + A D ++K+LV DP R+TAA+AL
Sbjct: 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296
Query: 354 SHPWVREGGDASEIPID 370
+HP++ E D + P+
Sbjct: 297 AHPYLAEYHDPEDEPVA 313
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 3e-28
Identities = 92/293 (31%), Positives = 140/293 (47%), Gaps = 56/293 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
+G G +G Y A DK G+ VA+KKI L E V RE+ +L+ L H N+
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIR-----LETEDEGVPSTAIREISLLKELN-HPNI 60
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRY-TEKDAAVV---VRQMLRVAAE 214
V+ + +N +Y+ E LD L K DS T D ++ + Q+L+ A
Sbjct: 61 VRLLDVVHSENKLYLVFEF------LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAY 114
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSAYYVAPEVL 273
CH H ++HRD+KP+N L + +LK DFGL+ F P + + V + +Y APE+L
Sbjct: 115 CHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 171
Query: 274 ---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL-----------RN 315
++ S P D+WSIG I + + RRP + D D +F+ L +
Sbjct: 172 LGSRQYSTP-VDIWSIGCI-FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229
Query: 316 KPDF-------RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
PD+ R+ P++ D + K+LV DP R++A AL HP+
Sbjct: 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-28
Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 17/267 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A K +G AVK ++K+ ++ VE E +IL H + +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y F+ + ++ ME GG+L+ I +K R+ E A ++ H G++
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEITSALMFLHDKGII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K +N L + K DFG+ + I GK G+ Y+APE+L+ GP
Sbjct: 119 YRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGP 175
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W++GV+ Y +LCG PF + ED +F+ +L ++ + W +S A D +K +
Sbjct: 176 SVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--LSQDAVDILKAFM 231
Query: 340 VKDPRARLTA------AQALSHPWVRE 360
K+P RL + L HP+ +E
Sbjct: 232 TKNPTMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-28
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
T+GK LG G FG T VAVK ++++ +E+ RE +I++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDAS--EQQIEEFLREARIMRKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+VK ++ + I ME GG+LLD + + + + +L A +
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELS-------LSDLLSFALQ 111
Query: 215 -----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L +HRD+ N L E+ +K +DFGLS + YY
Sbjct: 112 IARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDD---------YY 159
Query: 268 V-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE LK K +SDVWS GV+ + I G P+ +
Sbjct: 160 KVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMS 209
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-28
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 35/279 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQAL 153
G+L+G G +G Y+A + G+ +AVK++E I V+ ++ E++ L+ L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V++ + Y+ I +E GG + L + R+ E+ Q+L A
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGGS-IGSCL-RTYGRFEEQLVRFFTEQVLEGLA 122
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV---------GS 264
H G++HRD+K +N L + D K +DFG+S KK DI GS
Sbjct: 123 YLHSKGILHRDLKADNLLVDA---DGICKISDFGIS------KKSDDIYDNDQNMSMQGS 173
Query: 265 AYYVAPEVLKRKSGPES---DVWSIGVITYILLCGRRPFWDKTE--DGIFK-EVLRNKPD 318
+++APEV+ S S D+WS+G + + GRRP W E +FK R+ P
Sbjct: 174 VFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNKRSAPP 232
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
++S A DF+ +P R TA + L HP+
Sbjct: 233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 3e-28
Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQALA 154
+Y + +++G G FG + + + A+K+I LP + V+ R+ +L A
Sbjct: 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIR-----LPKSSSAVEDSRKEAVLLAKM 55
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V F +FE D ++YI ME C+GG+L+ +I ++ + E QM
Sbjct: 56 KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQH 115
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEV 272
H ++HRD+K +N FL ++ K +K DFG + + PG VG+ YYV PE+
Sbjct: 116 IHEKRVLHRDIKSKNIFLTQNGK----VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEI 171
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNS 330
+ +SD+WS+G I Y L + PF + +K ++ KP PS S
Sbjct: 172 WENMPYNNKSDIWSLGCILYELCTLKHPF----QANSWKNLILKVCQGSYKPLPSHYSYE 227
Query: 331 AKDFVKKLLVKDPRARLTAAQALS 354
+ +K++ ++PR+R +A LS
Sbjct: 228 LRSLIKQMFKRNPRSRPSATTILS 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-28
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 13/266 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I K +G G FG Y+A K++ + +K+I+ KM P+ ++ ++ IL A H
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V F+ +F+++ ++I ME C+GG+L+ RI ++ ++E Q+ H
Sbjct: 59 PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH 118
Query: 217 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK 274
++HRD+K +N FL K+ K DFG++ + + VG+ YY++PE+ +
Sbjct: 119 DRKILHRDIKSQNIFLSKNGM---VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQ 175
Query: 275 -RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAK 332
R ++D+WS+G + Y L + PF E +++ P P+ S +
Sbjct: 176 NRPYNNKTDIWSLGCVLYELCTLKHPF----EGNNLHQLVLKICQGYFAPISPNFSRDLR 231
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
+ +L PR R + L P++
Sbjct: 232 SLISQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-28
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 13/269 (4%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G + A D A G VA+K+I K E + E+ +++
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKE 72
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L + N+V F ++F + +++ ME GG L D + ++ E A V R+ L+
Sbjct: 73 LK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV---TETCMDEAQIAAVCRECLQAL 128
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y++APE
Sbjct: 129 EFLHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P +S
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSPI 244
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+DF+ + L D R +A + L HP+++
Sbjct: 245 FRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 7e-28
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 17/265 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K +I V E ++LQ H +
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+ + + ME GGEL + ++ ++E A +++ H +V
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALGYLHSCDVV 117
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 118 YRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 174
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R +S AK + LL
Sbjct: 175 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLAGLL 230
Query: 340 VKDPRARL-----TAAQALSHPWVR 359
KDP+ RL A + + H +
Sbjct: 231 KKDPKQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 9e-28
Identities = 87/316 (27%), Positives = 139/316 (43%), Gaps = 53/316 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQA 152
RY + K LG G +G A + + + VA+KKI +K IL + RE+K+L+
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKIL---AKRALRELKLLRH 57
Query: 153 LAGHENVVKFY---NAFEDD-NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
GH+N+ Y F + N +Y+ EL E L +I+ + T+ + Q+
Sbjct: 58 FRGHKNITCLYDMDIVFPGNFNELYLYEELMEAD--LHQII-RSGQPLTDAHFQSFIYQI 114
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-----IVG 263
L H ++HRD+KP N L + D LK DFGL+ V
Sbjct: 115 LCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFSENPGENAGFMTEYVA 171
Query: 264 SAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-----------------KT 304
+ +Y APE++ DVWS+G I LL GR+P +
Sbjct: 172 TRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVDQLNQILQVLGTPD 230
Query: 305 EDGIFK-------EVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQAL 353
E+ + + +R+ P+ +KP+ SI + A D ++KLL DP R++ +AL
Sbjct: 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290
Query: 354 SHPWVREGGDASEIPI 369
HP++ D + P+
Sbjct: 291 EHPYLAIWHDPDDEPV 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 1e-27
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 50/301 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+KK+ K++M+ V V+ E IL A A + VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL-AEADNPWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y +F+D+NY+Y+ ME GG+++ +L KKD+ +TE++ + + + H G +
Sbjct: 66 LYYSFQDENYLYLIMEYLPGGDMMT-LLMKKDT-FTEEETRFYIAETILAIDSIHKLGYI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL---------SDF------IKPGKKFQDI----- 261
HRD+KP+N L + +K +DFGL ++F P I
Sbjct: 124 HRDIKPDNLLLDA---KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180
Query: 262 -------------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 301
VG+ Y+APEV + E D WS+GVI Y +L G PF
Sbjct: 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240
Query: 302 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWV 358
+++++ K + +S AKD +K+L + RL SHP+
Sbjct: 241 SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299
Query: 359 R 359
+
Sbjct: 300 K 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 2e-27
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 44/286 (15%)
Query: 107 GQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVKFYN 164
G +G Y A DK G+ VA+KK+ EK K PI RE+ IL L H N+V
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITS---LREINILLKL-QHPNIVTVKE 71
Query: 165 AF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ + +Y+ ME E +L ++ + + + ++ Q+L A H + ++H
Sbjct: 72 VVVGSNLDKIYMVMEYVEH-DLKS-LMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH 129
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGP 279
RD+K N L + LK DFGL+ ++ P K + +V + +Y APE+L ++
Sbjct: 130 RDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYST 186
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----LRNKPDF------------ 319
D+WS+G I LL + F K+E + IFK + + P F
Sbjct: 187 AIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFT 246
Query: 320 -------RRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
R+K P S+S++ D + +LL DP R++A AL HP+
Sbjct: 247 KYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 3e-27
Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +L+G+G +G Y G A+K ++ + E++K+E+ +L+ + H
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 63
Query: 158 NVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
N+ +Y AF D+ +++ ME C G + D I K + E+ A + R++LR
Sbjct: 64 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 123
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 270
+ H H ++HRD+K +N L E++ +K DFG+S + + +G+ Y++AP
Sbjct: 124 LSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 180
Query: 271 EVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKP 323
EV+ P+ SD+WS+G+ + G P D + RN P + K
Sbjct: 181 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 240
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S + F++ LVK+ R T Q + HP++
Sbjct: 241 W---SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 5e-27
Identities = 92/325 (28%), Positives = 134/325 (41%), Gaps = 73/325 (22%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVK 144
+F + + + + K+ G G FG + A K VA+KK+ E K PI
Sbjct: 4 EFPFCDEVSKYEKLAKI-GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITA---L 59
Query: 145 REVKILQALAGHENVVKF----------YNAFEDDNYVYIAMELCEGGELLDRILAKKDS 194
RE+KILQ L HENVV YN ++ Y+ E CE L +L+ K+
Sbjct: 60 REIKILQLLK-HENVVNLIEICRTKATPYNRYKGS--FYLVFEFCEHD--LAGLLSNKNV 114
Query: 195 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK 253
++T + V++ +L H + ++HRDMK N L +D LK DFGL+ F
Sbjct: 115 KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARAFSL 171
Query: 254 P----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI------------------ 289
++ + V + +Y PE+L +R GP D+W G I
Sbjct: 172 SKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH 231
Query: 290 --TYIL-LCG-----------RRPFWDKTE---DGIFKEVLRNKPDFRRKPWPSISNSAK 332
T I LCG + + K E K R KP + A
Sbjct: 232 QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK-------DPHAL 284
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
D + KLLV DP R+ A AL+H +
Sbjct: 285 DLIDKLLVLDPAKRIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 54/318 (16%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKI 149
D RY +G G +G AT K G +VA+KKI E RE+KI
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQ-----RTLREIKI 56
Query: 150 LQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
L+ HEN++ + +FE N VYI EL E L +++ K +
Sbjct: 57 LRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETD--LYKLI--KTQHLSNDHIQYF 111
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKFQD 260
+ Q+LR H ++HRD+KP N L + LK DFGL+ P +
Sbjct: 112 LYQILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLARIADPEHDHTGFLTE 168
Query: 261 IVGSAYYVAPEV-LKRKSGPES-DVWSIGVITYILLCGRRPFWDK--------------- 303
V + +Y APE+ L K ++ D+WS+G I +L R F K
Sbjct: 169 YVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228
Query: 304 -TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 351
+++ + + +++ P + PW P+ A D + K+L +P R+T +
Sbjct: 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288
Query: 352 ALSHPWVREGGDASEIPI 369
AL+HP++ + D S+ P+
Sbjct: 289 ALAHPYLEQYHDPSDEPV 306
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 8e-27
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED----VKREVKILQA 152
+Y +++G G FG ++ KA+ V +K+I +M +D + E ++L+
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-----TKDERLAAQNECQVLKL 55
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L+ H N++++Y F +D + I ME GG L + I + +S E Q+L
Sbjct: 56 LS-HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLAL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
H ++HRD+K +N L K +K DFG+S + K +VG+ Y++PE+
Sbjct: 115 HHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPEL 172
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFRRKPWPSISN 329
+ K +SD+W++G + Y L +R F + +++ P R S
Sbjct: 173 CEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR-----YSP 227
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ + +L DP R +Q ++ P
Sbjct: 228 DLRQLILSMLNLDPSKRPQLSQIMAQPIC 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQ 151
++ + K+ G G +G + ++ G VA+KK E + +I IA+ RE+++L+
Sbjct: 1 EKYEKLSKI-GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIAL----REIRMLK 55
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQML 209
L H N+V F +++ E C+ L L++ +K ++ Q L
Sbjct: 56 QLK-HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKK----IIWQTL 110
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYV 268
+ CH H +HRD+KPEN L + +K DFG + + PG + D V + +Y
Sbjct: 111 QAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYTDYVATRWYR 167
Query: 269 APEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------GIF----KE 311
APE+L + GP DVW+IG + LL G +P W D G ++
Sbjct: 168 APELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226
Query: 312 VLRNKPDFR---------RKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ F+ R+P +P+IS+ A F+K L DP RL+ + L HP+
Sbjct: 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 12/248 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 60 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 117
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 118 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 174
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 175 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 230
Query: 340 VKDPRARL 347
KDP+ RL
Sbjct: 231 KKDPKQRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA+K++ + K+E+ I +
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ--------QQPKKELIINEI 67
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 68 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 124
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 125 LQALDFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 181
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-ER 240
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L HP+++
Sbjct: 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 19/288 (6%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
GV+ + D Y D + + +GHG FG Y AT+ + VAVKK+ +
Sbjct: 3 GVVKDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN 62
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
+D+ +EVK LQ L H N +++ + ++ ++ ME C G +L
Sbjct: 63 EKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSA--SDLLEVHKKPLQ 119
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E + A + L+ A H H ++HRD+K N L E +K DFG + P
Sbjct: 120 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSPANS 176
Query: 258 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 311
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F ++
Sbjct: 177 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 232
Query: 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ P + W ++S + FV L K P+ R +A+ L H +VR
Sbjct: 233 AQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQERPASAELLRHDFVR 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 18/268 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K + A+K ++K+ ++ V+ E +IL A H +
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ F+ + ++ ME GG+L+ +I ++ ++ E + ++ H HG++
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLMFQI--QRSRKFDEPRSRFYAAEVTLALMFLHRHGVI 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGP 279
+RD+K +N L + + K DFG+ + I G G+ Y+APE+L+ + GP
Sbjct: 119 YRDLKLDNILLDA---EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGP 175
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W++GV+ Y ++ G+ PF ED +F+ +L + D W +S A +K +
Sbjct: 176 SVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVW--LSKEAVSILKAFM 231
Query: 340 VKDPRARL--TAAQALS-----HPWVRE 360
K+P RL A+Q HP+ +E
Sbjct: 232 TKNPNKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 2e-26
Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ A +V + + +E
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE-- 114
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR 275
+V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 115 -KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 170
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK
Sbjct: 171 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSL 226
Query: 335 VKKLLVKDPRARL 347
+ LL KDP+ RL
Sbjct: 227 LSGLLKKDPKQRL 239
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 3e-26
Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A +K G A K I+ +ED E+ IL A H N+VK
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+AF +N ++I +E C GG + D ++ + + TE VV +Q L H + ++HR
Sbjct: 69 DAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL---KRKSGP 279
D+K N LF D +K DFG+S + ++ +G+ Y++APEV+ K P
Sbjct: 128 DLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 280 ---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDF 334
++DVWS+G+ + P + + ++ +++P +P W S+ KDF
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSEFKDF 241
Query: 335 VKKLLVKDPRARLTAAQALSHPWV 358
+KK L K+ AR T Q L HP+V
Sbjct: 242 LKKCLEKNVDARWTTTQLLQHPFV 265
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 3e-26
Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 30/276 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------EVKILQ 151
+ +GKLLG G FG Y+ D G +AVK+++ + P + E K E+++L+
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFD----PESPETSKEVNALECEIQLLK 59
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
L HE +V++Y D + + I ME GG + D++ K TE RQ+L
Sbjct: 60 NLL-HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQL--KSYGALTENVTRKYTRQIL 116
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQDIVGSA 265
+ H + +VHRD+K N L S ++K DFG S ++ G + + G+
Sbjct: 117 EGVSYLHSNMIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMKSVTGTP 173
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRK 322
Y+++PEV+ + G ++D+WS+G T + + +P W + E IFK + +P
Sbjct: 174 YWMSPEVISGEGYGRKADIWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IATQPTNPVL 230
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
P P +S+ +DF+K++ V + + R +A + L H +V
Sbjct: 231 P-PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 4e-26
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 21/264 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
+ LG G FG +AT K N D VA+K+ EK+K+I V+ V E KIL + H
Sbjct: 36 RTLGTGSFGRVILATYK-NEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFC 93
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V Y +F+D++Y+Y+ +E GGE +++ R+ Q++ +
Sbjct: 94 VNLYGSFKDESYLYLVLEFVIGGEFF--TFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN 151
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 278
+V+RD+KPEN L +D +K TDFG + + + + G+ Y+APE+ L G
Sbjct: 152 IVYRDLKPENLLL---DKDGFIKMTDFGFAKVVD--TRTYTLCGTPEYIAPEILLNVGHG 206
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
+D W++G+ Y +L G PF+ I++++L F + + N+ K +KKL
Sbjct: 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKL 262
Query: 339 LVKDPRARL-----TAAQALSHPW 357
L D R A HPW
Sbjct: 263 LSHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 26/292 (8%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED 142
GK F D + I + +G G +G + +K NG + AVK ++ I E+
Sbjct: 5 GKTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEE 60
Query: 143 VKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRI--LAKKDSR 195
++ E IL+AL+ H NVVKFY + ++ + +++ +ELC GG + D + K+ R
Sbjct: 61 IEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGER 120
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255
E A ++ + L H++ +HRD+K N L + + +K DFG+S +
Sbjct: 121 MEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTST 177
Query: 256 KKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPFWDKTEDGI 308
+ ++ VG+ +++APEV+ + +S DVWS+G+ L G P D
Sbjct: 178 RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237
Query: 309 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
++ RN P +P W SN DF++K L KD R T + L H ++
Sbjct: 238 LFKIPRNPPPTLHQPELW---SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 6e-26
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G+G +G Y G A+K ++ + E++K E+ +L+ + H N+
Sbjct: 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHHRNIAT 77
Query: 162 FYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+Y AF D+ +++ ME C G + D + K + E A + R++LR A
Sbjct: 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 274
H H ++HRD+K +N L E++ +K DFG+S + + +G+ Y++APEV+
Sbjct: 138 HAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 194
Query: 275 RKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSI 327
P+ SD+WS+G+ + G P D + RN P + K W
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKW--- 251
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S DF++ LVK+ +R + Q L HP++
Sbjct: 252 SKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 7e-26
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 125
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 241
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L H +++
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 8e-26
Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 40/266 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------ 145
+DFD K++G G FG + K++ A+K + K +MI KR
Sbjct: 43 EDFDVI----KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI--------KRSDSAFF 90
Query: 146 -EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAA 202
E + + A A E +V+ + AF+DD Y+Y+ ME GG+L++ + S Y EK A
Sbjct: 91 WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM-----SNYDIPEKWAR 145
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--- 259
+++ H G +HRD+KP+N L LK DFG +K
Sbjct: 146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTC--MKMDANGMVRC 200
Query: 260 -DIVGSAYYVAPEVLKRKS-----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLL 339
+K IS AKD + L
Sbjct: 261 DHKNSLTFPDDIEISKQAKDLICAFL 286
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 8e-26
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 30/280 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV--EDVKREVKILQALAG 155
+ I + +G G +G Y T+K +G AVK ++ PI+ E+++ E ILQ+L
Sbjct: 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILD------PISDVDEEIEAEYNILQSLPN 77
Query: 156 HENVVKFYNAF-EDDNYV----YIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQM 208
H NVVKFY F + D V ++ +ELC GG + + + L R E + ++
Sbjct: 78 HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGA 137
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-VGSAYY 267
L H + ++HRD+K N L + + +K DFG+S + + ++ VG+ ++
Sbjct: 138 LLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFW 194
Query: 268 VAPEVLKRKSGPES------DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
+APEV+ + + DVWS+G+ L G P +D ++ RN P
Sbjct: 195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL 254
Query: 322 KP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
P W S F+ + L+KD AR + L HP+++
Sbjct: 255 HPEKW---CRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 19/218 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIE-------KNKMILPIAVEDVKREVKI 149
Y + + LG G FG Y K NG +A+K+I K+K ++ D+ EV I
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 207
++ H N+V++Y F +++ +YI M+L EG L + L +K R+TE+ + Q
Sbjct: 62 IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121
Query: 208 MLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
M V A +LH +VHRD+ P N + ED + TDFGL+ +P K +VG+
Sbjct: 122 M--VLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDFGLAKQKQPESKLTSVVGT 176
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 301
Y PE++K + G ++DVW+ G I Y + + PF+
Sbjct: 177 ILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-25
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 48/231 (20%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+GK LG G FG T + +VAVK +++ E+ E I++ L
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGAS--EEEREEFLEEASIMKKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V+ +YI E GG+LLD + + + ++ +L++A +
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK--------LTLKDLLQMALQ 110
Query: 215 -----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L VHRD+ N L E+ +K +DFGLS DI YY
Sbjct: 111 IAKGMEYLESKNFVHRDLAARNCLV---TENLVVKISDFGLSR---------DIYEDDYY 158
Query: 268 V------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE LK K +SDVWS GV+ + I G +P+ +
Sbjct: 159 RKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMS 209
|
Length = 258 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 26/255 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA+G A+K ++K +I V E ++L+ H +
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTS 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ + V+A +
Sbjct: 60 LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEI---------VSALDY 110
Query: 217 LHG--LVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVL 273
LH +V+RD+K EN + +D +K TDFGL + I + G+ Y+APEVL
Sbjct: 111 LHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVL 167
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G D W +GV+ Y ++CGR PF+++ + +F+ +L F R ++S AK
Sbjct: 168 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAK 223
Query: 333 DFVKKLLVKDPRARL 347
+ LL+KDP RL
Sbjct: 224 SLLSGLLIKDPNKRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 63/320 (19%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
D +Y K +G G +G A + ++VA+KKI N++ D K RE+K
Sbjct: 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI-------DAKRTLREIK 56
Query: 149 ILQALAGHENVVKF--------YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+L+ L HENV+ AF D VYI EL + L +I+ + ++
Sbjct: 57 LLRHLD-HENVIAIKDIMPPPHREAFND---VYIVYELMDTD--LHQII-RSSQTLSDDH 109
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ- 259
+ Q+LR H ++HRD+KP N L + + LK DFGL+ F
Sbjct: 110 CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSEKGDFMT 166
Query: 260 DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFW---------------- 301
+ V + +Y APE+L S DVWS+G I LL GR+P +
Sbjct: 167 EYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRKPLFPGKDYVHQLKLITELL 225
Query: 302 ---DKTEDGIF-----KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTA 349
+ + G + +R+ P R+ +P + A D ++K+LV DP R+T
Sbjct: 226 GSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV 285
Query: 350 AQALSHPWVREGGDASEIPI 369
+AL+HP++ D S+ P+
Sbjct: 286 EEALAHPYLASLHDPSDEPV 305
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 5e-25
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN--VVK 161
+G G FG Y K A+K + K +++ V E IL E+ +V
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+ D+ +Y+ + GGEL + +K+ R++E A + +++ H + +V
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHL--QKEGRFSEDRAKFYIAELVLALEHLHKYDIV 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSG-- 278
+RD+KPEN L + + DFGLS + K G+ Y+APEVL + G
Sbjct: 119 YRDLKPENILLDA---TGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYT 175
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
D WS+GV+ + + CG PF+ + +++ + K F P +S+ + FVK L
Sbjct: 176 KHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVLSDEGRQFVKGL 232
Query: 339 LVKDPRARLTA 349
L ++P+ RL A
Sbjct: 233 LNRNPQHRLGA 243
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-25
Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 55/300 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A D+ + +A+KKI ++++ + A+ RE+ +L+ + H N+V
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAI----REISLLKEMQ-HGNIV 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVV---VRQMLRVAAEC 215
+ + + +Y+ E LD L K S K+ ++ + Q+LR A C
Sbjct: 65 RLQDVVHSEKRLYLVFEY------LDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC 118
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSAYYVAPEVL- 273
H H ++HRD+KP+N L + ++LK DFGL+ F P + F V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILL 176
Query: 274 --KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEVLR--------------N 315
+ S P D+WS+G I + + ++P + D D +FK + R +
Sbjct: 177 GSRHYSTP-VDIWSVGCI-FAEMVNQKPLFPGDSEIDELFK-IFRILGTPNEETWPGVTS 233
Query: 316 KPDFRRK--PW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364
PD++ W P++ + D + K+L DP R+TA AL H + ++ GDA
Sbjct: 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDA 293
|
Length = 294 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 7e-25
Identities = 85/262 (32%), Positives = 132/262 (50%), Gaps = 32/262 (12%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALAG 155
K+LG G FG ++ T G A+K ++K + V D K E IL A
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL----KVRDRVRTKMERDIL-AEVN 56
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D + + L +A +
Sbjct: 57 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAE-LALALD- 112
Query: 216 HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
HLH G+++RD+KPEN L E+ +K TDFGLS + I KK G+ Y+APEV
Sbjct: 113 HLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 169
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSIS 328
+ R+ +S D WS GV+ + +L G PF K +L+ K P F +S
Sbjct: 170 VNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQF-------LS 222
Query: 329 NSAKDFVKKLLVKDPRARLTAA 350
A+ ++ L ++P RL A
Sbjct: 223 PEAQSLLRALFKRNPANRLGAG 244
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 8e-25
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 39/235 (16%)
Query: 102 KLLGHGQFG--YTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG Y K VAVK ++++ +D +E ++++ L GH N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKL-GHPN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
VV+ ++ +Y+ +E EGG+LLD + + + + + + ++ +L A +
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117
Query: 216 --HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+L VHRD+ N L ED +K +DFGLS + YY
Sbjct: 118 MEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVYDDD---------YYRKKT 165
Query: 269 ---------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
APE LK +SDVWS GV+ + I G P+ + + + + +
Sbjct: 166 GGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL 220
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 8e-25
Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK-----REVKILQALAGHEN 158
LG G +G Y + G +A+K+I + +++ K E+ IL
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIR-------LELDESKFNQIIMELDILHKAVSPY- 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILA------KKDSRYTEKDAAVVVRQMLRVA 212
+V FY AF + VY+ ME + G L D++ A + VV+ + +
Sbjct: 61 IVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
E H ++HRD+KP N L + +K DFG+S + + K +G Y+APE
Sbjct: 120 EE---HNIIHRDVKPTNVLVNGNGQ---VKLCDFGVSGNLVASLAKTN--IGCQSYMAPE 171
Query: 272 VLKRKSGP--------ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE---VLRNKPDFR 320
+K GP +SDVWS+G+ + GR P+ +T IF + ++ P
Sbjct: 172 RIK-SGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP-- 228
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364
P S+ A+DFV K L K P R T AQ L HPW+ + +A
Sbjct: 229 TLP-SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 1e-24
Identities = 85/275 (30%), Positives = 138/275 (50%), Gaps = 32/275 (11%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------EVKILQALA 154
GKLLG G FG Y+ D G +A K+++ + P + E K E+++L+ L
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFD----PESPETSKEVSALECEIQLLKNLQ 62
Query: 155 GHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
HE +V++Y D + + I ME GG + D++ K TE RQ+L
Sbjct: 63 -HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQL--KAYGALTESVTRKYTRQILEGM 119
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQDIVGSAYYV 268
+ H + +VHRD+K N L SA ++K DFG S ++ G + + G+ Y++
Sbjct: 120 SYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWM 176
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWP 325
+PEV+ + G ++DVWS+G T + + +P W + E IFK + +P P
Sbjct: 177 SPEVISGEGYGRKADVWSLGC-TVVEMLTEKPPWAEYEAMAAIFK--IATQPT--NPQLP 231
Query: 326 S-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S IS A+DF+ + V + R R +A + L HP+ +
Sbjct: 232 SHISEHARDFLGCIFV-EARHRPSAEELLRHPFAQ 265
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 1e-24
Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG ++A K A+K ++K+ +++ VE E ++L H +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILA--KKD-SRYTEKDAAVVV-RQMLRVAAECHL 217
Y F+ ++ ME GG+L+ I + K D R T A ++ Q L H
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFL------HS 114
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEV-LKR 275
G+V+RD+K +N L + D +K DFG+ + + K G+ Y+APE+ L +
Sbjct: 115 KGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ 171
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
K D WS GV+ Y +L G+ PF E+ +F+ + + P + R W ++ AKD +
Sbjct: 172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR--W--LTREAKDIL 227
Query: 336 KKLLVKDPRARL-TAAQALSHPWVRE 360
KL V++P RL HP+ RE
Sbjct: 228 VKLFVREPERRLGVKGDIRQHPFFRE 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 56/293 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
+G G +G Y A +K G+ VA+KKI L E V RE+ +L+ L H N+
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKEL-NHPNI 61
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVR----QMLRVAAE 214
VK + +N +Y+ E L + L K D+ +++ Q+L+ A
Sbjct: 62 VKLLDVIHTENKLYLVFEF------LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAF 115
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSAYYVAPEVL 273
CH H ++HRD+KP+N L + ++K DFGL+ F P + + V + +Y APE+L
Sbjct: 116 CHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 172
Query: 274 ---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN-------------- 315
K S D+WS+G I ++ R F +E D +F+ + R
Sbjct: 173 LGCKYYSTA-VDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTPDEVVWPGVTS 230
Query: 316 ----KPDF---RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
KP F R+ + P + +D + ++L DP R++A AL+HP+
Sbjct: 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 22/272 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAG 155
+ +GKLLG G FG Y+ D G +AVK++ + + V ++ E+++L+ L
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR- 62
Query: 156 HENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H+ +V++Y D + + I +E GG + D++ K TE RQ+L+ +
Sbjct: 63 HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQL--KAYGALTENVTRRYTRQILQGVS 120
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQDIVGSAYYVA 269
H + +VHRD+K N L SA ++K DFG S I+ G + + G+ Y+++
Sbjct: 121 YLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMS 177
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPS 326
PEV+ + G ++DVWS+ T + + +P W + E IFK + +P P
Sbjct: 178 PEVISGEGYGRKADVWSVAC-TVVEMLTEKPPWAEYEAMAAIFK--IATQPTKPMLP-DG 233
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+S++ +DF+K++ V++ R R TA L HP+V
Sbjct: 234 VSDACRDFLKQIFVEEKR-RPTAEFLLRHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K + A+K ++K+ ++ VE E ++L H +
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ F+ +++ ME GG+L+ I + R+ E A +++ H G++
Sbjct: 61 LFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+K +N L +D +K DFG+ + K G+ Y+APE+LK + E
Sbjct: 119 YRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNE 175
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
S D WS GV+ Y +L G+ PF + ED +F +L ++P F R W IS AKD + KL
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR--W--ISKEAKDCLSKLF 231
Query: 340 VKDPRARL-TAAQALSHPWVRE 360
+DP RL HP+ R
Sbjct: 232 ERDPTKRLGVDGDIRQHPFFRG 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALA 154
+ G+ LG G F Y A D G +AVK++ VE +++E++++ L
Sbjct: 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL- 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H ++++ A +D++ + +E GG + L K + E Q+LR +
Sbjct: 61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSV--SHLLSKYGAFKEAVIINYTEQLLRGLSY 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQ-DIVGSAYYVA 269
H + ++HRD+K N L S + L+ DFG L+ +FQ ++G+ ++A
Sbjct: 119 LHENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMA 176
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEVLRNKPDFRRKP 323
PEVL+ + G DVWS+G + + + P W+ + IFK
Sbjct: 177 PEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIFKIASATTA------ 229
Query: 324 WPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
PSI S +D + L P R + + L HP R
Sbjct: 230 -PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 4e-24
Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 33/275 (12%)
Query: 102 KLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIAVED--VKREVKILQALAGHE 157
K+LG G +G + A+ ++ K+ K I+ + K E IL+A+ H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V AF+ +Y+ +E GGEL + +++ + E A + ++ +A E HL
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHL--EREGIFMEDTACFYLSEIS-LALE-HL 116
Query: 218 H--GLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 274
H G+++RD+KPEN L + +K TDFGL + I G G+ Y+APE+L
Sbjct: 117 HQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILM 173
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRRKPWPSISN 329
R G D WS+G + Y +L G PF KT D I K L N P P ++
Sbjct: 174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLP-------PYLTP 225
Query: 330 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 359
A+D +KKLL ++P +RL AA+ SHP+ R
Sbjct: 226 EARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 4e-24
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 22/270 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y K +G G FG + K +G + +K+I +KM P E+ ++EV +L + H
Sbjct: 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V++ +FE++ +YI M+ CEGG+L +I A++ + E Q+ H
Sbjct: 59 PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH 118
Query: 217 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK 274
++HRD+K +N FL K D ++K DFG++ + + + +G+ YY++PE+ +
Sbjct: 119 DRKILHRDIKSQNIFLTK----DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICE 174
Query: 275 -RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-VLRNKPDFRRKPWPSI----S 328
R +SD+W++G + Y + + F E G K VL+ R +P + S
Sbjct: 175 NRPYNNKSDIWALGCVLYEMCTLKHAF----EAGNMKNLVLK----IIRGSYPPVSSHYS 226
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
++ V +L ++PR R + L ++
Sbjct: 227 YDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-24
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 50/290 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G + A ++ + VA+K++ + ++ + A+ RE+ +L+ L H+N+V
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKELK-HKNIV 62
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECH 216
+ Y+ D + + E C D+ L K DS + D +V + Q+L+ A CH
Sbjct: 63 RLYDVLHSDKKLTLVFEYC------DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH 116
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
H ++HRD+KP+N L ++ LK DFGL+ F P + + V + +Y P+VL
Sbjct: 117 SHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 173
Query: 276 KSGPES--DVWSIGVITYILLCGRRPFWDKTE-----DGIFKEV----------LRNKPD 318
+ D+WS G I L RP + + IF+ + + PD
Sbjct: 174 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233
Query: 319 FRRKP-------W----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
++ P P ++++ +D ++ LLV +P R++A +AL HP+
Sbjct: 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 7e-24
Identities = 78/292 (26%), Positives = 124/292 (42%), Gaps = 54/292 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G + Y ++ G+ VA+K+I E+ I RE+ +++ L HEN+
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAI------REISLMKELK-HENI 60
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK---DAAVV---VRQMLRVAA 213
V+ ++ +N + + E + L K + + D V Q+L+ A
Sbjct: 61 VRLHDVIHTENKLMLVFEYMDKD------LKKYMDTHGVRGALDPNTVKSFTYQLLKGIA 114
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH + ++HRD+KP+N L LK DFGL+ F P F + V + +Y AP+V
Sbjct: 115 FCHENRVLHRDLKPQNLLINK---RGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDV 171
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---------------- 314
L R D+WS+G I ++ GR F + ++ R
Sbjct: 172 LLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL 231
Query: 315 --NKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
KP F R P +P D + +LL +P R++A AL HPW
Sbjct: 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 8e-24
Identities = 91/328 (27%), Positives = 138/328 (42%), Gaps = 76/328 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVK--ILQA 152
+RY K +G G G A D G VA+KK+ + P V KR + +L
Sbjct: 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR-----PFQNVTHAKRAYRELVLMK 70
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVV 204
L H+N++ N F E+ VY+ MEL + +++ L + Y +
Sbjct: 71 LVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSY-------L 123
Query: 205 VRQMLRVAAEC---HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
+ QML C HLH G++HRD+KP N + KS D +LK DFGL+
Sbjct: 124 LYQML-----CGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 175
Query: 260 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDK------T 304
V + YY APEV+ E+ D+WS+G I ++ G F W+K T
Sbjct: 176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGT 235
Query: 305 EDGIFKEVL--------RNKPDFRRKPWPSI-----------------SNSAKDFVKKLL 339
F L N+P + + + ++ A+D + K+L
Sbjct: 236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKML 295
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEI 367
V DP R++ AL HP++ D SE+
Sbjct: 296 VIDPEKRISVDDALQHPYINVWYDPSEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 83/291 (28%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A DK G VA+KK + I P A+ RE+ +LQ L+ +V
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTAL----REISLLQMLSESIYIV 64
Query: 161 KFYNA--FEDDN---YVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
+ + E+ N +Y+ E + + +D K + Q+L+ A
Sbjct: 65 RLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH HG++HRD+KP+N L K LK D GL F P K + + + +Y APEV
Sbjct: 125 HCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEV 182
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV-------------L 313
L D+WS+G I + + F +E IFK + L
Sbjct: 183 LLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKL 242
Query: 314 RN-------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
R+ KP + P +S D ++K+L DP R++A AL+HP+
Sbjct: 243 RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A D +G+ VA+KK+ + + +PI+ RE+ +L L H N+V+
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISS---LREITLLLNLR-HPNIVE 70
Query: 162 FYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
+ +++ ME CE + L +L + ++E ++ Q+LR H +
Sbjct: 71 LKEVVVGKHLDSIFLVMEYCE--QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF 128
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRK 276
++HRD+K N L LK DFGL+ + P K V + +Y APE+L
Sbjct: 129 IIHRDLKVSNLLLTDKGC---LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTT 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTE---------------DGIF----------KE 311
D+W++G I LL + K+E + I+ K
Sbjct: 186 YTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245
Query: 312 VLRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
L +P + + +P +S + + LL+ DP+ R TA +AL + +E
Sbjct: 246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 19/275 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ +D ++ +T + +GHG FG Y A D + VA+KK+ + +D+ +EVK
Sbjct: 19 FKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKF 78
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ + H N +++ + ++ ++ ME C G +L E + A + L
Sbjct: 79 LQRIK-HPNSIEYKGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAITHGAL 135
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+ A H H ++HRD+K N L E +K DFG + P F VG+ Y++A
Sbjct: 136 QGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPANSF---VGTPYWMA 189
Query: 270 PEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 190 PEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNE 248
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S+ ++FV L K P+ R T+ + L H +V
Sbjct: 249 W---SDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 2e-23
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K LG G +G Y ++ A+K+++ M ED E++IL A H
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK-EREDAVNEIRIL-ASVNH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAE 214
N++ + AF D N + I ME G+L I +K R E++ + Q+LR
Sbjct: 59 PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQA 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H ++HRD+K N + A + +K D G+S +K I G+ +Y+APEV K
Sbjct: 119 LHEQKILHRDLKSAN-ILLVANDL--VKIGDLGISKVLKKNMAKTQI-GTPHYMAPEVWK 174
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAK 332
+ +SD+WS+G + Y + PF ++ + +V R K P P I S +
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP----PIPPIYSQDLQ 230
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
+F++ +L P+ R + L+ P V
Sbjct: 231 NFIRSMLQVKPKLRPNCDKILASPAV 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-23
Identities = 80/306 (26%), Positives = 124/306 (40%), Gaps = 55/306 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + A+K + K +++ VK E IL A A +E VVK
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDIL-AEADNEWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y +F+D + +Y M+ GG+++ L + + E A + ++ H G +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMS--LLIRLGIFEEDLARFYIAELTCAIESVHKMGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL---------SDFIKPGKKF-QD----------- 260
HRD+KP+N L D +K TDFGL S + + G QD
Sbjct: 124 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180
Query: 261 -----------------------IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCG 296
+VG+ Y+APEVL R + D WS+GVI Y +L G
Sbjct: 181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQAL 353
+ PF T +V+ + +S A D + + L RL A +
Sbjct: 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKNGADEIK 299
Query: 354 SHPWVR 359
+HP+ +
Sbjct: 300 AHPFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 3e-23
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 19/275 (6%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+ + D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +E
Sbjct: 6 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
V+ LQ L H N +++ + ++ ++ ME C G +L E + A V
Sbjct: 66 VRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTH 122
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
L+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPY 176
Query: 267 YVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFR 320
++APEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 235
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
W S ++FV L K P+ R T+ L H
Sbjct: 236 SGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKH 267
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 4e-23
Identities = 74/263 (28%), Positives = 136/263 (51%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHE 157
K+LG G +G ++ + D ++ K+ K I+ A E + E ++L+ +
Sbjct: 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V + AF+ D +++ ++ GGEL + ++ R+ E++ + +++ H
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHK 123
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG-KKFQDIVGSAYYVAPEVLKR 275
G+++RD+K EN L S + + TDFGLS +F + ++ G+ Y+AP++++
Sbjct: 124 LGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG 180
Query: 276 KSGPES---DVWSIGVITYILLCGRRPFWDKTEDG-------IFKEVLRNKPDFRRKPWP 325
G D WS+GV+ Y LL G PF T DG I + +L+++P P+P
Sbjct: 181 GDGGHDKAVDWWSMGVLMYELLTGASPF---TVDGEKNSQAEISRRILKSEP-----PYP 232
Query: 326 S-ISNSAKDFVKKLLVKDPRARL 347
+S AKD +++LL+KDP+ RL
Sbjct: 233 QEMSALAKDIIQRLLMKDPKKRL 255
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 99.6 bits (248), Expect = 6e-23
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 11/248 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K G+ AVK ++K+ +++ VE E ++L + +
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y F+ +++ ME GG+L+ I K R+ A +++ H G++
Sbjct: 61 LYCTFQTKEHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGP 279
+RD+K +N + D +K DFG+ + + + G+ Y+APE+L+ K
Sbjct: 119 YRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D WS GV+ Y +L G+ PF ED +F+ + + P + R W I+ +KD ++KL
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR--W--ITKESKDILEKLF 231
Query: 340 VKDPRARL 347
+DP RL
Sbjct: 232 ERDPTRRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 6e-23
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K + +R+ KI +L A RE + + +
Sbjct: 3 FEIIKVIGRGAFGEVAVVKMK-HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQ 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + AF+D+NY+Y+ M+ GG+LL +L+K + R E A + +M+ H
Sbjct: 62 WITTLHYAFQDENYLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR 275
VHRD+KP+N L + ++ DFG + Q VG+ Y++PE+L+
Sbjct: 121 LHYVHRDIKPDNVLLDM---NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQA 177
Query: 276 ------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--- 326
K GPE D WS+GV Y +L G PF+ ++ + +++ ++ F+ +PS
Sbjct: 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHIT 234
Query: 327 -ISNSAKDFVKKLLVKDPR 344
+S AKD +++L+ R
Sbjct: 235 DVSEEAKDLIQRLICSRER 253
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 1e-22
Identities = 75/270 (27%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R+Y ++LG G FG +A G A K++EK ++ E +IL+ +
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-N 58
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+ VV A+E + + + + + GG+L I + + E+ A ++L +
Sbjct: 59 SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDL 118
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK- 274
H V+RD+KPEN L + ++ +D GL+ I G+ + VG+ Y+APEVL
Sbjct: 119 HRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN 175
Query: 275 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
++ D W +G + Y ++ G+ PF + E +EV R + S AK
Sbjct: 176 QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSI 235
Query: 335 VKKLLVKDPRARL-----TAAQALSHPWVR 359
K LL KDP+ RL A + HP+ R
Sbjct: 236 CKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 99.0 bits (246), Expect = 1e-22
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 20/254 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N D+V KI +L A RE + + ++
Sbjct: 3 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + AF+D+N +Y+ M+ GG+LL +L+K + R E A + +M+ H
Sbjct: 62 WITTLHYAFQDENNLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVL-- 273
VHRD+KP+N L + ++ DFG + Q VG+ Y++PE+L
Sbjct: 121 LHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 177
Query: 274 ----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--- 326
K K GPE D WS+GV Y +L G PF+ ++ + +++ +K F+ +P+
Sbjct: 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVT 234
Query: 327 -ISNSAKDFVKKLL 339
+S AKD +++L+
Sbjct: 235 DVSEDAKDLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 98.9 bits (246), Expect = 1e-22
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 28/276 (10%)
Query: 102 KLLGHGQFGYTYV---ATDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
K+LG G +G ++ T G A+K ++K ++ VE + E +L+ +
Sbjct: 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V + AF+ + +++ ++ GGE+ + + + ++E + +++ H
Sbjct: 66 FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHK 123
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK-KFQDIVGSAYYVAPEVLKR 275
G+V+RD+K EN L S + + TDFGLS +F+ K + G+ Y+APE+++
Sbjct: 124 LGIVYRDIKLENILLDS---EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG 180
Query: 276 KSG--PESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRRKPWPS-IS 328
K G D WS+G++ + LL G PF T+ + + +L+ P P+PS I
Sbjct: 181 KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP-----PFPSFIG 235
Query: 329 NSAKDFVKKLLVKDPRARLTAA-----QALSHPWVR 359
A+D + KLL KDP+ RL A + HP+ +
Sbjct: 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 1e-22
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVK 161
LG G FG +A K G+ A+K ++K +I VE + E +I + H +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ F+ +++V ME GG+L+ I ++E A ++ H + +V
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLMMHI---HTDVFSEPRAVFYAACVVLGLQYLHENKIV 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+K +N L + + +K DFGL + + G + G+ ++APEVL S
Sbjct: 124 YRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTR 180
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
+ D W +GV+ Y +L G PF E+ +F ++ ++ + R +S A +++LL
Sbjct: 181 AVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSREAISIMRRLL 236
Query: 340 VKDPRARLTAAQ 351
++P RL + +
Sbjct: 237 RRNPERRLGSGE 248
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 1e-22
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 22/277 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ I K++G G FG V K G A+K + K +M L A RE + +
Sbjct: 2 DFE----ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM-LKRAETACFREERDVLV 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ + AF+D+N +Y+ M+ GG+LL +L+K + R E A + +M+
Sbjct: 57 NGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYLAEMVLAI 115
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAP 270
H G VHRD+KP+N L ++ ++ DFG + Q VG+ Y++P
Sbjct: 116 DSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISP 172
Query: 271 EVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
E+L K + GPE D WS+GV Y +L G PF+ ++ + +++ +K F+ P
Sbjct: 173 EILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPD 232
Query: 325 -PSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 357
+S AKD +++L+ P RL HP+
Sbjct: 233 VTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 2e-22
Identities = 89/311 (28%), Positives = 133/311 (42%), Gaps = 53/311 (17%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
RYT K +G G +G A DK G++VA+KK+ + I + RE+ +L+ +
Sbjct: 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR-PFQSEIFAKRAYRELTLLKHMQ- 72
Query: 156 HENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
HENV+ + F+D Y+ M + L +I+ +E +V
Sbjct: 73 HENVIGLLDVFTSAVSGDEFQD---FYLVMPYMQTD--LQKIMGHP---LSEDKVQYLVY 124
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + ED LK DFGL+ + V + +
Sbjct: 125 QMLCGLKYIHSAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--HADAEMTGYVVTRW 179
Query: 267 YVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-----------------------PFW 301
Y APEV+ D+WS+G I +L G+ F
Sbjct: 180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV 239
Query: 302 DKTEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
K ED K +++ P + RK +P S A D ++K+L D RLTA +AL HP+
Sbjct: 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPY 299
Query: 358 VREGGDASEIP 368
DA E
Sbjct: 300 FDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 98.9 bits (246), Expect = 2e-22
Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 29/264 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-------EVKIL 150
Y + K++G G FG + K+ A+K + K +MI KR E + +
Sbjct: 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--------KRSDSAFFWEERDI 96
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++
Sbjct: 97 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD--VPEKWARFYTAEVVL 153
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VGSAYYV 268
H G +HRD+KP+N L + LK DFG K G D VG+ Y+
Sbjct: 154 ALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 210
Query: 269 APEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
+PEVLK + G E D WS+GV Y +L G PF+ + G + +++ +K
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 270
Query: 324 WPSISNSAKDFVKKLLVKDPRARL 347
IS AK+ + L D RL
Sbjct: 271 DNDISKEAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 2e-22
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 65/299 (21%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENV 159
L+G G +G K G VA+KK E +KM+ IA+ RE+++L+ L HEN+
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAM----REIRMLKQLR-HENL 62
Query: 160 V----------KFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
V + Y FE D+ V +E G LD +K + Q+
Sbjct: 63 VNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNG--LDESRVRK-----------YLFQI 109
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYY 267
LR CH H ++HRD+KPEN L + +K DFG + + PG+ + D V + +Y
Sbjct: 110 LRGIEFCHSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVATRWY 166
Query: 268 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVL-------RNKP 317
APE+L K G D+W++G + +L G F D D ++ + R++
Sbjct: 167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226
Query: 318 DFRRKP-------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
F++ P +P +S D K+ L DP R +++Q L H +
Sbjct: 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 3e-22
Identities = 94/317 (29%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY + +G G +G A D +G +VA+KKI + +A + RE+KIL+
Sbjct: 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL-RELKILRH 60
Query: 153 LAGHENVVKFYNAF----EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
H+N++ + D VY+ M+L E L I+ D TE+ + Q+
Sbjct: 61 FK-HDNIIAIRDILRPPGADFKDVYVVMDLMESD--LHHII-HSDQPLTEEHIRYFLYQL 116
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQ-DIVG 263
LR H ++HRD+KP N L ED L+ DFG LS K F + V
Sbjct: 117 LRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA 173
Query: 264 SAYYVAPEVLKRKSGPES----DVWSIGVITYILLCGRRP-FWDKT-------------- 304
+ +Y APE+L S PE D+WS+G I +L GRR F K
Sbjct: 174 TRWYRAPELL--LSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGKNYVHQLKLILSVLGS 230
Query: 305 -EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 351
+ + + ++N P + PW P S A D + ++L DP R+T Q
Sbjct: 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQ 290
Query: 352 ALSHPWVREGGDASEIP 368
AL HP++ + D + P
Sbjct: 291 ALQHPFLAQYHDPDDEP 307
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 3e-22
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG KA G A KK++K ++ + E KIL +V
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL-EKVSSRFIVSLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
AFE + + + M L GG+L I + + E A Q++ H +V+R
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-D 282
D+KPEN L + +++ +D GL+ +K GKK + G+ Y+APEVL+ + S D
Sbjct: 120 DLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 342
+++G Y ++ GR PF + E +E+ R + + S AKD + LL KD
Sbjct: 177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236
Query: 343 PRARL-----TAAQALSHPWVR 359
P RL +A + HP +
Sbjct: 237 PEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 97.8 bits (243), Expect = 4e-22
Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 55/326 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K M+ V ++ E IL G VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+D +Y+ ME GG+++ +L KKD+ E + +L + A H G +
Sbjct: 66 MFYSFQDKRNLYLIMEFLPGGDMMT-LLMKKDTLSEEATQFYIAETVLAIDA-IHQLGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----------------FQDI---- 261
HRD+KP+N L + +K +DFGL +K + FQ++
Sbjct: 124 HRDIKPDNLLLDAK---GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR 180
Query: 262 ----------------VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKT 304
VG+ Y+APEV + + D WS+GVI Y +L G PF +T
Sbjct: 181 KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREG 361
+++V+ K P IS AKD + + D R+ + + SHP+ EG
Sbjct: 241 PQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF-EG 298
Query: 362 GD-------ASEIPIDISVLNNMRQF 380
D + IPI+I +++ F
Sbjct: 299 VDWGHIRERPAAIPIEIKSIDDTSNF 324
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 95.7 bits (238), Expect = 5e-22
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
++ YD++ +R +LG G +G Y A D + R+A+K+I + V+ +
Sbjct: 2 EYEYEYDENGER-----VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS---RYVQPLH 53
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E+ + L H N+V++ + ++ + I ME GG L +L K + + ++
Sbjct: 54 EEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTII 111
Query: 205 --VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQ 259
+Q+L H + +VHRD+K +N L + +K +DFG S I P +
Sbjct: 112 FYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINPCT--E 167
Query: 260 DIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTED-------GIF 309
G+ Y+APEV+ R G +D+WS+G + G+ PF + E G+F
Sbjct: 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF 227
Query: 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
K + P+ S+S AK+F+ + DP R +A L P++
Sbjct: 228 K-IHPEIPE-------SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 96.6 bits (240), Expect = 5e-22
Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+ + +Y ++ GGEL + +++ + E A ++ H +V
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIV 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+KPEN L S + TDFGL + I+ G+ Y+APEVL ++
Sbjct: 119 YRDLKPENILLDS---QGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDR 175
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
+ D W +G + Y +L G PF+ + ++ +L NKP + K P+I+NSA+ ++ LL
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK--PNITNSARHLLEGLL 231
Query: 340 VKDPRARLTA 349
KD RL A
Sbjct: 232 QKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 95.9 bits (238), Expect = 5e-22
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 22/272 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG Y D + VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ ++Y ++ ++I ME GG LD + K E A ++R++L+
Sbjct: 59 -CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 115 DYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 171
Query: 272 VLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI--- 327
V+K+ + ++D+WS+G+ L G P D + + +N P P++
Sbjct: 172 VIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------PTLEGQ 224
Query: 328 -SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S K+FV+ L KDPR R TA + L H ++
Sbjct: 225 YSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 85/314 (27%), Positives = 119/314 (37%), Gaps = 63/314 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQ 151
R Y I LG G FG Y A G VA+KKI EK+ PI RE+KIL+
Sbjct: 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF--PITAL---REIKILK 62
Query: 152 ALAGHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 203
L H NVV + VY+ + L +L + TE
Sbjct: 63 KLK-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHD--LSGLLENPSVKLTESQIKC 119
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-----KPGK-- 256
+ Q+L H + ++HRD+K N L + LK DFGL+ P
Sbjct: 120 YMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFGLARPYDGPPPNPKGGG 176
Query: 257 -----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE---- 305
K+ ++V + +Y PE+L +R+ D+W IG + + R K++
Sbjct: 177 GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236
Query: 306 DGIFK-------------EVLRNKPDFR-RKPWPSI--SNSAK------DFVKKLLVKDP 343
IFK L +P K D + KLL DP
Sbjct: 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP 296
Query: 344 RARLTAAQALSHPW 357
RLTA+ AL HP+
Sbjct: 297 YKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 1e-21
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDV 143
Y D + +G +G G G Y K G +AVK++ E+NK IL
Sbjct: 10 YPADLNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRIL------- 61
Query: 144 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL----CEGGELLDRILAKKDSRYTEK 199
++ ++ +VK Y F D+ V+I MEL + +LL RI K
Sbjct: 62 -MDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLD--KLLKRIQGPIPEDILGK 118
Query: 200 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
+V+ + + + HG++HRD+KP N L ++K DFG+S + K
Sbjct: 119 MTVAIVKALHYLKEK---HGVIHRDVKPSNILLD---ASGNVKLCDFGISGRLVDSKAKT 172
Query: 260 DIVGSAYYVAPEVLK-RKSGPE----SDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVL 313
G A Y+APE + P+ +DVWS+G+ L G+ P+ + KTE + ++L
Sbjct: 173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232
Query: 314 RNKPDFRRKPWPSISNSA------KDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ +P PS+ + FV L KD R R + L HP++R
Sbjct: 233 QEEP-------PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 90/315 (28%), Positives = 136/315 (43%), Gaps = 55/315 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +++G G +G A D G++VA+KKI + A + RE+K+L+ L H
Sbjct: 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATR-ILREIKLLRLLR-H 58
Query: 157 ENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
++V+ F+D +Y+ EL E +L I A D T + + Q+
Sbjct: 59 PDIVEIKHIMLPPSRREFKD---IYVVFELME-SDLHQVIKANDD--LTPEHHQFFLYQL 112
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---KPGKKF-QDIVGS 264
LR H + HRD+KP+N L A D LK DFGL+ P F D V +
Sbjct: 113 LRALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 169
Query: 265 AYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDK------------------ 303
+Y APE+ K P D+WSIG I +L G+ F K
Sbjct: 170 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229
Query: 304 -TEDGI-------FKEVLRNKP--DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
T + + +R K F +K +P+ A +++LL DP+ R TA +AL
Sbjct: 230 ETISRVRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAEEAL 288
Query: 354 SHPWVREGGDASEIP 368
+ P+ + P
Sbjct: 289 ADPYFKGLAKVEREP 303
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY + LG G G + A D RVAVKKI + P +V+ RE+KI++
Sbjct: 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKI---VLTDPQSVKHALREIKIIRR 58
Query: 153 LAGHENVVKFYNAFEDDNY--------------VYIAMELCEGGELLDRILAKKDSRYTE 198
L H+N+VK Y VYI E E L +L + +E
Sbjct: 59 LD-HDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETD--LANVL--EQGPLSE 113
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---- 254
+ A + + Q+LR H ++HRD+KP N + ED LK DFGL+ + P
Sbjct: 114 EHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLKIGDFGLARIVDPHYSH 171
Query: 255 -GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE------ 305
G + +V + +Y +P +L D+W+ G I +L G+ F E
Sbjct: 172 KGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL 230
Query: 306 --DGI-------FKEVLRNKPDF-------RRKPW----PSISNSAKDFVKKLLVKDPRA 345
+ + E+L P F R+P P ++ A DF++++L +P
Sbjct: 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMD 290
Query: 346 RLTAAQALSHPW 357
RLTA +AL HP+
Sbjct: 291 RLTAEEALMHPY 302
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 1e-21
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 32/282 (11%)
Query: 93 DFDRR-----YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D RR + + + +G G +G Y A + G+ A+K I+ + P V ++
Sbjct: 1 DLSRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIK----LEPGEDFAVVQQE 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
I+ H N+V ++ ++ + ++I ME C GG L D + +E A V R+
Sbjct: 57 IIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQD--IYHVTGPLSESQIAYVSRE 114
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAY 266
L+ H G +HRD+K N L ++ +K DFG+S I K + +G+ Y
Sbjct: 115 TLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIAKRKSFIGTPY 171
Query: 267 YVAPEV--LKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFR- 320
++APEV ++RK G D+W++G+ L + P +D +F L K +F+
Sbjct: 172 WMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQP 228
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ W SNS FVK L K+P+ R TA + L HP+
Sbjct: 229 PKLKDKMKW---SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 1e-21
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--------REVK 148
RY + + LG G FG Y+ DK E+ K++ I V ++ +E +
Sbjct: 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQANQEAQ 54
Query: 149 ILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVV 205
+L L H +VKF+ +F E D + I E CEG +L ++ L +E
Sbjct: 55 LLSKLD-HPAIVKFHASFLERDAFCIIT-EYCEGRDLDCKLEELKHTGKTLSENQVCEWF 112
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGS 264
Q+L H ++HRD+K +N K ++ LK DFG+S + G+
Sbjct: 113 IQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLLMGSCDLATTFTGT 168
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
YY++PE LK + +SD+WS+G I Y + C F + + ++ P
Sbjct: 169 PYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG-------P 221
Query: 324 WPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
PS+ S ++ +L KDP R +AA+ L +P++
Sbjct: 222 TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 96.2 bits (239), Expect = 2e-21
Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 29/264 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-------EVKIL 150
Y + K++G G FG + K++ A+K + K +MI KR E + +
Sbjct: 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI--------KRSDSAFFWEERDI 96
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++
Sbjct: 97 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYD--VPEKWAKFYTAEVVL 153
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VGSAYYV 268
H GL+HRD+KP+N L + LK DFG + G D VG+ Y+
Sbjct: 154 ALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYI 210
Query: 269 APEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
+PEVLK + G E D WS+GV + +L G PF+ + G + +++ +K
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE 270
Query: 324 WPSISNSAKDFVKKLLVKDPRARL 347
IS AK+ + L D RL
Sbjct: 271 DVEISKHAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 2e-21
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 13/271 (4%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R+Y ++LG G FG +A G A KK+EK ++ E +IL+ +
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-N 58
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VV A+E + + + + L GG+L I ++ + E A ++ +
Sbjct: 59 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL 118
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H +V+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K
Sbjct: 119 HQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 175
Query: 276 KSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+ S D W++G + Y ++ G+ PF + + +EV R + + + S A+
Sbjct: 176 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSL 235
Query: 335 VKKLLVKDPRARL-----TAAQALSHPWVRE 360
K LL KDP+ RL A + HP ++
Sbjct: 236 CKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 2e-21
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 13/249 (5%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VV 160
+LG G FG +A K + A+K ++K+ +I VE E ++L AL G +
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVL-ALPGKPPFLT 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ ++ F+ + +Y ME GG+L+ I ++ ++ E A ++ H G+
Sbjct: 65 QLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGKFKEPHAVFYAAEIAIGLFFLHSKGI 122
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSG 278
++RD+K +N + + + +K DFG+ + I GK + G+ Y+APE + + G
Sbjct: 123 IYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYG 179
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L
Sbjct: 180 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGL 235
Query: 339 LVKDPRARL 347
L K P RL
Sbjct: 236 LTKHPAKRL 244
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 3e-21
Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 65/298 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILP-IAVEDVKREVKILQALAGHENVV 160
+G G +G Y +K G VA+KKI E + +P A+ RE+ +L+ L H N+V
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAI----REISLLKELQ-HPNIV 62
Query: 161 KFYNAFEDDNYVYIAMELCE-----------GGELLDRILAKKDSRYTEKDAAVVVRQML 209
+ ++ +Y+ E G+ +D L K Y Q+L
Sbjct: 63 CLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKS---YL--------YQIL 111
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 268
+ CH ++HRD+KP+N L + +K DFGL+ F P + + V + +Y
Sbjct: 112 QGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVRVYTHEVVTLWYR 168
Query: 269 APEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK------------- 310
APEVL R S P D+WSIG I + + ++P + D D +F+
Sbjct: 169 APEVLLGSPRYSTP-VDIWSIGTI-FAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW 226
Query: 311 ---EVLRN--------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
L + K R ++ D ++K+L+ DP R++A +AL+HP+
Sbjct: 227 PGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 4e-21
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 47/286 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALA 154
+T G++LG G +G Y G +AVK++E N + E ++ EV +L++L
Sbjct: 2 WTKGEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGG---ELLDRILAKKD---SRYTEKDAAVVVRQM 208
H N+V++ DDN + I ME GG +L+R + +YT +Q+
Sbjct: 61 -HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT--------KQI 111
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDI 261
L A H + +VHRD+K N + + +K DFG + + + +
Sbjct: 112 LDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGLHGTHSNMLKSM 168
Query: 262 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF- 319
G+ Y++APEV+ G +SD+WSIG + + G+ P + R F
Sbjct: 169 HGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL---------ASMDRLAAMFY 219
Query: 320 ---RRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
R P + S +A DFV L +D R +A Q L H ++
Sbjct: 220 IGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 4e-21
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 8/208 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K +G GQF Y AT + VA+KK++ +M+ A +D +E+ +L+ L H
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHP 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAEC 215
NV+K+ ++F +DN + I +EL + G+L I K+ E+ Q+
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK 274
H ++HRD+KP N + +K D GL F +VG+ YY++PE +
Sbjct: 123 HSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFW 301
+SD+WS+G + Y + + PF+
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 5e-21
Identities = 87/327 (26%), Positives = 142/327 (43%), Gaps = 51/327 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K M+ V ++ E IL A VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL-VEADSLWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+D +Y+ ME GG+++ +L KKD+ TE++ + + + H G +
Sbjct: 66 MFYSFQDKLNLYLIMEFLPGGDMMT-LLMKKDT-LTEEETQFYIAETVLAIDSIHQLGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----------------FQDI---- 261
HRD+KP+N L S +K +DFGL +K + FQ++
Sbjct: 124 HRDIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR 180
Query: 262 ----------------VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKT 304
VG+ Y+APEV + + D WS+GVI Y +L G PF +T
Sbjct: 181 KAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK-DPRARLTAAQALSHPWVREGGD 363
+K+V+ K P IS AKD + + + + R + + EG D
Sbjct: 241 PQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVD 300
Query: 364 -------ASEIPIDISVLNNMRQFVKY 383
+ IPI+I +++ F ++
Sbjct: 301 WEHIRERPAAIPIEIKSIDDTSNFDEF 327
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 9e-21
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 55/305 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQALA 154
+ I +G G +G Y A DK G+ VA+KK+ + K PI A+ RE+KIL+ L
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAI----REIKILRQLN 64
Query: 155 GHENVVKFYNAFEDDNYV----------YIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
H N+V D Y+ E + L +L ++E
Sbjct: 65 -HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHD--LMGLLESGLVHFSEDHIKSF 121
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIV 262
++Q+L CH +HRD+K N L + + +K DFGL+ + + + V
Sbjct: 122 MKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNSEESRPYTNKV 178
Query: 263 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------------------- 300
+ +Y PE+L + + GP DVWS G I L ++P
Sbjct: 179 ITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPIFQANQELAQLELISRLCGSP 237
Query: 301 ----WDKTEDGIFKEVLRNKPDFRRK---PWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
W + ++ K +RR+ + I A D + +L DP R TA +AL
Sbjct: 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297
Query: 354 SHPWV 358
+ PW+
Sbjct: 298 NSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 1e-20
Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 75
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 76 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 131
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 132 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 186
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKPD---FRRKP 323
E++ D+WS+G I LL GR F K +LR P ++
Sbjct: 187 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 246
Query: 324 WPSISN----------------------SAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
S N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 247 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306
Query: 362 GDASEIPI 369
D + P+
Sbjct: 307 HDPDDEPV 314
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 1e-20
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 15/252 (5%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA+G AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL- 220
+ +F+ + +Y ++ GGEL + +++ + E A ++ +A +LH L
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHL--QRERSFPEPRARFYAAEI--ASALGYLHSLN 116
Query: 221 -VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 278
++RD+KPEN L S + TDFGL + I+ K G+ Y+APEVL+++
Sbjct: 117 IIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPY 173
Query: 279 PES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
+ D W +G + Y +L G PF+ + ++ +L NKP R KP +IS SA+ ++
Sbjct: 174 DRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL-NKP-LRLKP--NISVSARHLLEG 229
Query: 338 LLVKDPRARLTA 349
LL KD RL A
Sbjct: 230 LLQKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 2e-20
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVRQML 209
A H +VK ++ F+ D+ + + ME GG+L +I + + E + ++ Q++
Sbjct: 120 AACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIV 179
Query: 210 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------ 262
E H ++HRD+K N FL + +K DFG S K++ D V
Sbjct: 180 LALDEVHSRKMMHRDLKSANIFLMPTG----IIKLGDFGFS------KQYSDSVSLDVAS 229
Query: 263 ---GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
G+ YY+APE+ +RK ++D+WS+GVI Y LL RPF ++ I ++VL K D
Sbjct: 230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD 289
Query: 319 FRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQAL 353
P+P +S+ K + LL K+P R T Q L
Sbjct: 290 ----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLL 321
|
Length = 478 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.3 bits (229), Expect = 2e-20
Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 54/311 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE----DVKREVKILQA 152
RY K +G G +G A D+ G +VA+KK+ + P E RE+++L+
Sbjct: 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR-----PFQSELFAKRAYRELRLLKH 70
Query: 153 LAGHENVVKFYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ HENV+ + F D + Y+ M G L +++ K + +E +V
Sbjct: 71 MK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLM--KHEKLSEDRIQFLVY 125
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML+ H G++HRD+KP N + ED LK DFGL+ + + V + +
Sbjct: 126 QMLKGLKYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QTDSEMTGYVVTRW 180
Query: 267 YVAPEVLKR--KSGPESDVWSIGVITYILLCGR-----------------------RPFW 301
Y APEV+ D+WS+G I +L G+ + F
Sbjct: 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240
Query: 302 DKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
K + K ++ P FR+K + P+ + A + ++K+LV D +R+TAA+AL+HP+
Sbjct: 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300
Query: 358 VREGGDASEIP 368
E D +
Sbjct: 301 FEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 3e-20
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 8/208 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K +G GQF Y AT +G VA+KK++ ++ A D +E+ +L+ L H
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
NV+K+Y +F +DN + I +EL + G+L + + K+ EK Q+
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLK 274
H ++HRD+KP N + +K D GL F +VG+ YY++PE +
Sbjct: 123 HSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFW 301
+SD+WS+G + Y + + PF+
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 89.8 bits (222), Expect = 5e-20
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 59 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 115 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 171
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 172 VIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKP 228
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
K+FV+ L K+P R TA + L H ++
Sbjct: 229 LKEFVEACLNKEPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 8e-20
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 59/310 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG +A A+K + K ++L V VK E IL A A +E VV+
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDIL-AEADNEWVVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y +F+D + +Y M+ GG+++ ++ + + E A + ++ H G +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL--------------------------------- 248
HRD+KP+N L D +K TDFGL
Sbjct: 124 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDP 180
Query: 249 -----SDFIKP-----GKKFQ-----DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYI 292
D +KP ++ Q +VG+ Y+APEVL R + D WS+GVI Y
Sbjct: 181 ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240
Query: 293 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TA 349
+L G+ PF +T +V+ + P +S A D + K L + P RL A
Sbjct: 241 MLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLGKNGA 299
Query: 350 AQALSHPWVR 359
+ +HP+ +
Sbjct: 300 DEIKAHPFFK 309
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 9e-20
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 11/251 (4%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG +A K + A+K ++K+ +I VE E ++L + +
Sbjct: 7 VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
++ F+ + +Y ME GG+L+ I ++ ++ E A ++ H G+++
Sbjct: 67 HSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISVGLFFLHRRGIIY 124
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+K +N + S + +K DFG+ + + G + G+ Y+APE++ + G
Sbjct: 125 RDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKS 181
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L+
Sbjct: 182 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMT 237
Query: 341 KDPRARLTAAQ 351
K P RL
Sbjct: 238 KHPSKRLGCGP 248
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 1e-19
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A K +G AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+ +Y ++ GGEL + +++ + E A ++ H +V
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGELFFHL--QRERSFPEPRARFYAAEIASALGYLHSINIV 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+KPEN L S + TDFGL + I G+ Y+APEV++++
Sbjct: 119 YRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDN 175
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
+ D W +G + Y +L G PF+ + ++ +L R P S +A +++LL
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELL 231
Query: 340 VKDPRARLTA 349
KD + RL A
Sbjct: 232 EKDRQRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 1e-19
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VV 160
+LG G FG +A K + A+K ++K+ +I VE E ++L AL+G +
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL-ALSGKPPFLT 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ ++ F+ + +Y ME GG+L+ +I ++ R+ E A ++ H G+
Sbjct: 65 QLHSCFQTMDRLYFVMEYVNGGDLMYQI--QQVGRFKEPHAVFYAAEIAIGLFFLHSKGI 122
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
++RD+K +N + S + +K DFG+ + + G + G+ Y+APE++ + G
Sbjct: 123 IYRDLKLDNVMLDS---EGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYG 179
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L
Sbjct: 180 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGL 235
Query: 339 LVKDPRARL 347
+ K P RL
Sbjct: 236 MTKHPGKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 1e-19
Identities = 76/334 (22%), Positives = 137/334 (41%), Gaps = 63/334 (18%)
Query: 93 DFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------- 144
RY G LG G +G A D G VA+KK++ ++ + +
Sbjct: 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIH 64
Query: 145 ----REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
RE+KI+ + HEN++ + + + +++ + M++ L +++ +K R TE
Sbjct: 65 FTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASD--LKKVVDRK-IRLTESQ 120
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----------- 249
++ Q+L H +HRD+ P N S K DFGL+
Sbjct: 121 VKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSDT 177
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--- 300
+ ++ ++ V + +Y APE+L K D+WS+G I LL G+ F
Sbjct: 178 LSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237
Query: 301 --------------------W-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
W + ++ E KP + +P+ S+ A D ++ LL
Sbjct: 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLL 297
Query: 340 VKDPRARLTAAQALSHPWVREGG---DASEIPID 370
+P R++A +AL H + + D S++P +
Sbjct: 298 KLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331
|
Length = 335 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 2e-19
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVS 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+E + + + + + GG+L I + + E+ A ++ + +V
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ +D GL+ I G+ + VG+ Y+APEV+ + S
Sbjct: 125 YRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS 181
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W +G + Y ++ G+ PF + E +EV R + + + S AK + LL
Sbjct: 182 PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLT 241
Query: 341 KDPRARL-----TAAQALSHP 356
K+P+ RL AA HP
Sbjct: 242 KNPKERLGCRGNGAAGVKQHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 3e-19
Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +L+G G G Y+A D RVA+KKI ++ P+ + RE KI L H
Sbjct: 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-H 61
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRV--- 211
+V Y+ D + VY M EG L L + + +K+S E V L +
Sbjct: 62 PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHK 121
Query: 212 ----AAECHLHGLVHRDMKPENFL----------------FKSAKED--SSLKATDFGL- 248
H G++HRD+KP+N L FK +E+ + + +
Sbjct: 122 ICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNIC 181
Query: 249 -SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTED 306
S PGK IVG+ Y+APE L ES D++++GVI Y +L P+ + +
Sbjct: 182 YSSMTIPGK----IVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY--RRKK 235
Query: 307 G---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
G +++V+ + + P+ I K L DP R ++ Q L
Sbjct: 236 GRKISYRDVILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQEL 283
|
Length = 932 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 88.6 bits (219), Expect = 3e-19
Identities = 67/281 (23%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKILQALAGHENVV 160
+++G G + + K +R+ K+ K +++ ++ V+ E + + + H +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKT-ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
++ F+ ++ ++ +E GG+L+ R L ++ +R+ + ++ + +
Sbjct: 60 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL------- 112
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 274
H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+
Sbjct: 113 HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 169
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 324
+ G D W++GV+ + ++ GR PF TED +F+ +L + R
Sbjct: 170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 226
Query: 325 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
S+S A +K L KDP+ RL A HP+ R
Sbjct: 227 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 4e-19
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A K++G AVK ++K ++ + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+ +Y ++ GGEL + +++ + E A ++ H ++
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGELFFHL--QRERCFLEPRARFYAAEVASAIGYLHSLNII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+KPEN L S + TDFGL + ++P + G+ Y+APEVL+++
Sbjct: 119 YRDLKPENILLDS---QGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDR 175
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
+ D W +G + Y +L G PF+ + ++ +L + +A D + LL
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLL 231
Query: 340 VKDPRARLTA 349
KD R RL A
Sbjct: 232 HKDQRRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 5e-19
Identities = 80/310 (25%), Positives = 133/310 (42%), Gaps = 59/310 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K++M + VK E +L A + VV
Sbjct: 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVL-AESDSPWVVS 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y +F+D Y+Y+ ME GG+L+ +L K D+ ++E + + + H G +
Sbjct: 66 LYYSFQDAQYLYLIMEFLPGGDLMT-MLIKYDT-FSEDVTRFYMAECVLAIEAVHKLGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-------------------------------- 249
HRD+KP+N L +K +DFGLS
Sbjct: 124 HRDIKPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVA 180
Query: 250 -----------DFIKPGKKFQDI-----VGSAYYVAPEV-LKRKSGPESDVWSIGVITYI 292
D I KK + + VG+ Y+APE+ L++ G E D WS+G I +
Sbjct: 181 VDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240
Query: 293 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TA 349
L G PF + +++++ + +S A+D +++L+ + RL A
Sbjct: 241 CLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299
Query: 350 AQALSHPWVR 359
+ SHP+ R
Sbjct: 300 HEIKSHPFFR 309
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 6e-19
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 63/304 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G+G FG + TD +G RVA+KK+ L ++ + V RE+K+L H+NV+
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-VSCKRVFRELKMLCFFK-HDNVLSAL 65
Query: 164 NA--------FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+ FE+ +Y+ EL + L +I+ + V + Q+LR
Sbjct: 66 DILQPPHIDPFEE---IYVVTELMQSD--LHKIIVSP-QPLSSDHVKVFLYQILRGLKYL 119
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEV 272
H G++HRD+KP N L S + LK DFGL+ +P + Q++V + YY APE+
Sbjct: 120 HSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDESKHMTQEVV-TQYYRAPEI 175
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPF-----------------------WDKTEDG 307
L R D+WS+G I LL R F +G
Sbjct: 176 LMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235
Query: 308 IFKEVLRNKPDFRRKPWPSIS----------NSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+LR KP PS+ + A + ++LV DP R++AA AL+HP+
Sbjct: 236 ARAHILRGPH----KP-PSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290
Query: 358 VREG 361
+ EG
Sbjct: 291 LDEG 294
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 6e-19
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 22/272 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ ++I ME GG LD + A + E A +++++L+
Sbjct: 59 -CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGL 114
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 115 DYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 171
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI--- 327
V+++ + ++D+WS+G+ L G P D + + +N P P++
Sbjct: 172 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PTLTGE 224
Query: 328 -SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S K+F+ L KDP R TA + L H ++
Sbjct: 225 FSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 6e-19
Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKREVKILQALAGHEN 158
+G G G Y + G A+K I N ED + RE++IL+ H N
Sbjct: 82 IGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRD-VNHPN 133
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
VVK ++ F+ + + + +E +GG L +A E+ A V RQ+L A H
Sbjct: 134 VVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD------EQFLADVARQILSGIAYLHRR 187
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLK--- 274
+VHRD+KP N L SAK ++K DFG+S + + VG+ Y++PE +
Sbjct: 188 HIVHRDIKPSNLLINSAK---NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL 244
Query: 275 ---RKSGPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFKEVLRNKPDFRRKPW 324
G D+WS+GV GR PF W I + P+
Sbjct: 245 NHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---CMSQPPE----AP 297
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ S + F+ L ++P R +A Q L HP++
Sbjct: 298 ATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331
|
Length = 353 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 9e-19
Identities = 85/317 (26%), Positives = 132/317 (41%), Gaps = 57/317 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG +A A+K + K ++ V VK E IL A A +E VVK
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDIL-AEADNEWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y +F+D + +Y M+ GG+++ ++ + + E A + ++ H G +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFI 123
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL--------------------SDFIKPGKKFQDI 261
HRD+KP+N L D +K TDFGL D ++P + D+
Sbjct: 124 HRDIKPDNILIDL---DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180
Query: 262 ----------------------------VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYI 292
VG+ Y+APEVL RK + D WS+GVI +
Sbjct: 181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240
Query: 293 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL--VKDPRARLTAA 350
+L G+ PF T +V+ + P +S A D + KL ++ R A
Sbjct: 241 MLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300
Query: 351 QALSHPWVREGGDASEI 367
+HP+ E +S+I
Sbjct: 301 DIKAHPFFSEVDFSSDI 317
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 1e-18
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 32/285 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
K+ ++Y I ++LG G G A ++G+ AVK ++ M + EV L
Sbjct: 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCL 85
Query: 151 ------QALAGHENVVKFYNAFEDDNYVYIAMEL--CEGGELLDRI--LAKKDSRYTEKD 200
+ HE+ K + +N + IA+ L G+L I AK + + E +
Sbjct: 86 LNCDFFSIVKCHEDFAK-KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHE 144
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP------ 254
A ++ Q+L H ++HRD+K N L S + +K DFG S
Sbjct: 145 AGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDFGFSKMYAATVSDDV 201
Query: 255 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEV 312
G+ F G+ YYVAPE+ +RK ++D++S+GV+ Y LL +RPF DG +EV
Sbjct: 202 GRTF---CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF-----DGENMEEV 253
Query: 313 LRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ R P P SIS ++ V LL DP+ R ++++ L+ P
Sbjct: 254 MHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 1e-18
Identities = 72/264 (27%), Positives = 124/264 (46%), Gaps = 10/264 (3%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVS 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+E + + + + L GG+L I + + E+ A ++ + H +V
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPE 280
+RD+KPEN L + ++ +D GL+ I G+ + VG+ Y+APEV+K +
Sbjct: 125 YRDLKPENILLD---DYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS 181
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W +G + Y ++ G+ PF + E +EV R + + + S +A+ ++LL
Sbjct: 182 PDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLT 241
Query: 341 KDPRARL-----TAAQALSHPWVR 359
KDP RL A + +HP+ R
Sbjct: 242 KDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 86.7 bits (214), Expect = 2e-18
Identities = 87/324 (26%), Positives = 136/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 72 CVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMELD----HERMSYLLY 126
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 239
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ +AL HP++ D +E+
Sbjct: 300 AKRISVDEALQHPYINVWYDPAEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 2e-18
Identities = 90/319 (28%), Positives = 138/319 (43%), Gaps = 61/319 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQA 152
+RY K +G G G A D G VAVKK+ + N+ + RE+ +L+
Sbjct: 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT----HAKRAYRELVLLKC 76
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 77 V-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHMELD----HERMSYLLY 130
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRY 187
Query: 267 YVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI--------- 308
Y APEV L D+WS+G I L+ G F W+K + +
Sbjct: 188 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247
Query: 309 -FKEVLR----NKPD---------FRRKPWPSIS-------NSAKDFVKKLLVKDPRARL 347
+ +R N+P F +PS S + A+D + K+LV DP R+
Sbjct: 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRI 307
Query: 348 TAAQALSHPWVREGGDASE 366
+ +AL HP++ D +E
Sbjct: 308 SVDEALRHPYITVWYDPAE 326
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 4e-18
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQA 152
++ + ++G G +G K + VA+KK + ++ E+VK RE+K+L+
Sbjct: 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE-----ENEEVKETTLRELKMLRT 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L EN+V+ AF +Y+ E E L +L + + + + Q+++
Sbjct: 57 LK-QENIVELKEAFRRRGKLYLVFEYVEKNML--ELLEEMPNGVPPEKVRSYIYQLIKAI 113
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAP 270
CH + +VHRD+KPEN L + LK DFG + + G + + V + +Y +P
Sbjct: 114 HWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSP 170
Query: 271 E-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK-------------EVLRN 315
E +L G D+WS+G I L G+ F ++E D +F ++ +
Sbjct: 171 ELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230
Query: 316 KPDFRRKPWPSISNSAK--------------DFVKKLLVKDPRARLTAAQALSHP 356
P F +P++++ D +K LL +P R Q L+HP
Sbjct: 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 5e-18
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQALAGHE 157
+GK+ G G F A + G A+K ++K+ ++E V RE++ L+ L+ H
Sbjct: 4 LGKI-GEGTFSEVLKAQSRKTGKYYAIKCMKKHFK----SLEQVNNLREIQALRRLSPHP 58
Query: 158 NVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAA 213
N+++ D + + EL + L + I K + EK + Q+L+
Sbjct: 59 NILRLIEVLFDRKTGRLALVFELMDM-NLYELI---KGRKRPLPEKRVKSYMYQLLKSLD 114
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H +G+ HRD+KPEN L K D LK DFG I + + + + +Y APE L
Sbjct: 115 HMHRNGIFHRDIKPENILIK----DDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECL 170
Query: 274 KRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL---RNKPDFRRKPW- 324
GP+ D+W++G + + +L F E D I K +VL + + +
Sbjct: 171 LTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230
Query: 325 ------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P+ S D +KKLL DP R+TA QAL HP+
Sbjct: 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 6e-18
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
RY +G G +G A D +VAVKK+ + L I RE+++L+ +
Sbjct: 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMK- 72
Query: 156 HENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
HENV+ + F E+ N VY+ L G L+ I+ K + +++ ++ Q+L
Sbjct: 73 HENVIGLLDVFTPATSIENFNEVYLVTNLM--GADLNNIV--KCQKLSDEHVQFLIYQLL 128
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
R H G++HRD+KP N + ED L+ DFGL+ + + V + +Y A
Sbjct: 129 RGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADDEMTGYVATRWYRA 183
Query: 270 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----NKPDFRRK- 322
PE++ D+WS+G I LL G+ F K ++ P+ +K
Sbjct: 184 PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKI 243
Query: 323 -------------PWPSISNS---------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P A D ++K+LV D R++A++AL+HP+ +
Sbjct: 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303
Query: 361 GGDASEIP 368
D + P
Sbjct: 304 YHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 7e-18
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 13/266 (4%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG +A G A KK+ K ++ E E +IL A +V
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRIL-AKVHSRFIVSLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + M + GG+L I + +++ + E A Q++ H ++
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+KPEN L D +++ +D GL+ +K G+ K + G+ ++APE+L+ +
Sbjct: 120 YRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
S D +++GV Y ++ R PF + E KE+ + + S ++K F + LL
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236
Query: 340 VKDPRARL-----TAAQALSHPWVRE 360
KDP RL +HP R+
Sbjct: 237 AKDPEKRLGFRDGNCDGLRTHPLFRD 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 8e-18
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 126 VKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 185
V+KI K K I E + Q + + N +K Y + + M+ + G+L
Sbjct: 45 VQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLF 97
Query: 186 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
D L KK+ + +E + ++RQ++ + H H ++H D+K EN L+ AK+ + D
Sbjct: 98 D--LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD--RIYLCD 153
Query: 246 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDK 303
+GL I P D G+ Y +PE +K + S D W++GV+TY LL G+ PF +
Sbjct: 154 YGLCKIIGTPSC--YD--GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209
Query: 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 348
++ + E L + + ++S +A DFV+ +L + RLT
Sbjct: 210 EDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT 254
|
Length = 267 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 9e-18
Identities = 85/319 (26%), Positives = 135/319 (42%), Gaps = 61/319 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI--------- 308
Y APEV+ E+ D+WS+G I ++ G F W+K + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 309 -----FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKDPRARL 347
+ + N+P + K +P + ++ A+D + K+LV D R+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 348 TAAQALSHPWVREGGDASE 366
+ +AL HP++ D SE
Sbjct: 311 SVDEALQHPYINVWYDPSE 329
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 2e-17
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K N A+K ++K + ++ V+ E + + + + +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ F+ + +++ +E GG+L+ + ++ + E+ A ++ H G++
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHM--QRQRKLPEEHARFYAAEICIALNFLHERGII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGP 279
+RD+K +N L D +K TD+G+ + + PG G+ Y+APE+L+ + G
Sbjct: 119 YRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGF 175
Query: 280 ESDVWSIGVITYILLCGRRPFWD--------KTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
D W++GV+ + ++ GR PF D TED +F+ +L R +S A
Sbjct: 176 SVDWWALGVLMFEMMAGRSPF-DIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKA 230
Query: 332 KDFVKKLLVKDPRARL 347
+K L KDP+ RL
Sbjct: 231 SHVLKGFLNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 2e-17
Identities = 72/255 (28%), Positives = 110/255 (43%), Gaps = 54/255 (21%)
Query: 145 REVKILQALAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
RE++I+ HE +V FY AF ++N + + ME + G L DRI K
Sbjct: 52 RELQIM-----HECRSPYIVSFYGAFLNENNICMCMEFMDCGSL-DRIY---------KK 96
Query: 201 AAVVVRQMLRVAAECHLHGL---------VHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+ ++L A + GL +HRD+KP N L S + +K DFG+S
Sbjct: 97 GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ---IKLCDFGVS-- 151
Query: 252 IKPGKKFQDI----VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED 306
G+ I VG++ Y++PE ++ K +SDVWS+G+ L G+ PF D
Sbjct: 152 ---GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208
Query: 307 --------GIFKEVLR--NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
GI + + +P R P +DFV L+KDP R T Q + P
Sbjct: 209 DDGQDDPMGILDLLQQIVQEPP-PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267
Query: 357 WVREGGDASEIPIDI 371
+ +D+
Sbjct: 268 PFIQA--LRASNVDL 280
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 2e-17
Identities = 88/302 (29%), Positives = 130/302 (43%), Gaps = 65/302 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE----NV 159
LG G G + +G +A K I I P + RE+K+L HE +
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLIHLE--IKPAIRNQIIRELKVL-----HECNSPYI 61
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-- 217
V FY AF D + I ME +GG LD++L KK R E + +LR +L
Sbjct: 62 VGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPENILGKISIAVLR--GLTYLRE 117
Query: 218 -HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEV 272
H ++HRD+KP N L S E +K DFG+S G+ + VG+ Y++PE
Sbjct: 118 KHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 169
Query: 273 LK-RKSGPESDVWSIGVITYILLCGRRP------------FWDKTEDGIFKEVLR----N 315
L+ +SD+WS+G+ + GR P F +G KE R +
Sbjct: 170 LQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229
Query: 316 KPDFRR-------------KPWPSI-----SNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
PD R +P P + S+ +DFV K L K+P+ R + HP+
Sbjct: 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289
Query: 358 VR 359
++
Sbjct: 290 IK 291
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 3e-17
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 27/270 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + +G G +G Y A + G+ AVK I K+ +++E+ +++ H
Sbjct: 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKECK-HC 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V ++ ++ ++I ME C GG L D + +E A V R+ L+ A H
Sbjct: 67 NIVAYFGSYLSREKLWICMEYCGGGSLQD--IYHVTGPLSELQIAYVCRETLQGLAYLHS 124
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEV--LK 274
G +HRD+K N L ++ +K DFG++ I K + +G+ Y++APEV ++
Sbjct: 125 KGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVE 181
Query: 275 RKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFR------RKPWP 325
+ G D+W++G+ L + P +D +F L +K +F+ + W
Sbjct: 182 KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQPPKLKDKTKW- 237
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSH 355
S++ +FVK L K+P+ R TA + L+H
Sbjct: 238 --SSTFHNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 5e-17
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 26/265 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG K G A KK++K ++ + E +IL+ + +V
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLH 218
AFE ++ + M L GG+L I Y + + + +++ +A+ HLH
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHI-------YNVGERGLEMERVIHYSAQITCGILHLH 112
Query: 219 --GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+V+RDMKPEN L + + + +D GL+ +K GK G+ Y+APE+LK +
Sbjct: 113 SMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEE 169
Query: 277 SGPES-DVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSISNSA 331
D +++G Y ++ GR PF D E + + + L ++ F + + + +
Sbjct: 170 PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEES 226
Query: 332 KDFVKKLLVKDPRARLTAAQALSHP 356
KD + L K P RL + + P
Sbjct: 227 KDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 9e-17
Identities = 46/152 (30%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 453
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 510
+G +DF EF+ TL ++++ DSE+ ++ AF+ FD D +GFI+ ELR + G
Sbjct: 60 GNGTIDFPEFL--TLMARKMKDTDSEE-EIKE--AFKVFDRDGNGFISAAELRHVMTNLG 114
Query: 511 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 539
K + +D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 87/326 (26%), Positives = 127/326 (38%), Gaps = 76/326 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKM----ILPIAVEDVKREVKIL 150
+Y I +G G +G Y A K G A+KK + +K I A RE+ +L
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSAC----REIALL 56
Query: 151 QALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
+ L HENVV F + VY+ + E +L I K R + + M
Sbjct: 57 RELK-HENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQII---KFHR--QAKRVSIPPSM 109
Query: 209 LRVAAECHLHGL--------VHRDMKPENFLFKS-AKEDSSLKATDFGLSD-FIKPGKKF 258
++ L+G+ +HRD+KP N L E +K D GL+ F P K
Sbjct: 110 VKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPL 169
Query: 259 QD---IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED------- 306
D +V + +Y APE+L R D+W+IG I LL F +
Sbjct: 170 ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPF 229
Query: 307 ------GIFK-----------------EVLRNKPDFRRKPWPS----------ISNSAK- 332
IF+ E DF+ K +PS ++
Sbjct: 230 QRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQG 289
Query: 333 -DFVKKLLVKDPRARLTAAQALSHPW 357
D ++KLL DP R+TA +AL HP+
Sbjct: 290 FDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 1e-16
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 23/263 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + A+K I K ++ V E +L A +V
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVL-AQVNCPFIVPLK 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVH 222
+F+ +Y+ + GGEL + +++ R+ A ++L A E H +++
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHL--QREGRFDLSRARFYTAELL-CALENLHKFNVIY 116
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
RD+KPEN L + DFGL +K K G+ Y+APE+L ++
Sbjct: 117 RDLKPENILLDYQ---GHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA 173
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKK 337
D W++GV+ Y +L G PF+D+ + +++++L+ PD AKD +
Sbjct: 174 VDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD-------GFDRDAKDLLIG 226
Query: 338 LLVKDPRARL---TAAQALSHPW 357
LL +DP RL A + +HP+
Sbjct: 227 LLSRDPTRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 3e-16
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 45/299 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQ 151
Y + K +G+G+FG ++ K + K I E+ K L I V +V RE+K
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV-NVMRELK--- 70
Query: 152 ALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQ 207
H+N+V++ + F + + +YI ME C+ G+L I K + E + RQ
Sbjct: 71 ----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQ 126
Query: 208 MLRVAAECHL-------HGLVHRDMKPENFLF--------KSAKEDSSL------KATDF 246
+L A CH ++HRD+KP+N K + ++L K DF
Sbjct: 127 LLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDF 186
Query: 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP---ESDVWSIGVITYILLCGRRPFWDK 303
GLS I VG+ YY +PE+L ++ +SD+W++G I Y L G+ PF
Sbjct: 187 GLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246
Query: 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362
L+ PD P S +K LL + R +A Q L + ++ G
Sbjct: 247 NNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302
|
Length = 1021 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 5e-16
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAG--HENV 159
+G G +G Y A D +G VA+K +++ N+ LP++ REV +L+ L H N+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLST---VREVALLKRLEAFDHPNI 64
Query: 160 VKFYNA-----FEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V+ + + + V + E + LD++ T KD ++RQ LR
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKD---LMRQFLRGL 121
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
H + +VHRD+KPEN L S +K DFGL+ +V + +Y APEV
Sbjct: 122 DFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEV 178
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFW------DK-----------TEDGIFKEVLR 314
L + + D+WS+G I + + R+P + D+ ED ++V
Sbjct: 179 LLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237
Query: 315 NKPDFR-RKPW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ F R P P I S + ++L +P R++A +AL HP+
Sbjct: 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 6e-16
Identities = 67/275 (24%), Positives = 130/275 (47%), Gaps = 26/275 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K A+K I+K + ++ V+ E + + + H +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ F+ ++ ++ +E GG+L+ + ++ + E+ A ++ H G++
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHM--QRQRKLPEEHARFYSAEISLALNFLHERGII 118
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K +N L + + +K TD+G+ + I+PG G+ Y+APE+L+ + G
Sbjct: 119 YRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGF 175
Query: 280 ESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
D W++GV+ + ++ GR PF TED +F+ +L + R S+S
Sbjct: 176 SVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVK 231
Query: 331 AKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
A +K L KDP+ RL SHP+ R
Sbjct: 232 ASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 1e-15
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQAL 153
Y +++G G +G + + +G + +KK+ L A ++ E ++L L
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLN-----LRNASRRERKAAEQEAQLLSQL 56
Query: 154 AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
H N+V + ++E +D +YI M CEGG+L ++ +K E Q+
Sbjct: 57 K-HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL 115
Query: 213 AECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-IVGSAYYVAP 270
H ++HRD+K +N FL ++ + +K D G++ ++ ++G+ YY++P
Sbjct: 116 QYLHEKHILHRDLKTQNVFLTRT----NIIKVGDLGIARVLENQCDMASTLIGTPYYMSP 171
Query: 271 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-PDFRRKPWPSIS 328
E+ K +SDVW++G Y + + F K + + ++ K P + P +
Sbjct: 172 ELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELG 231
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ + +L K P R + L P++
Sbjct: 232 ----ELIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 2e-15
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 43/286 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + + K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI----REVSLLKNLK-HANIVT 67
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ + + + E + L + L + + + + + Q+LR + CH ++
Sbjct: 68 LHDIIHTERCLTLVFEYLDSD--LKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKIL 125
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL---KRKS 277
HRD+KP+N L E LK DFGL+ P K + + V + +Y P+VL S
Sbjct: 126 HRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS 182
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------------------N 315
P D+W +G I Y + GR F T + R
Sbjct: 183 TP-IDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL 241
Query: 316 KPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P +R +P P + D + LL+ + ++R++A AL H +
Sbjct: 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 2e-15
Identities = 78/301 (25%), Positives = 119/301 (39%), Gaps = 70/301 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
LG G + Y K G VA+K+I E RE +L+ L H N+
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLE------HEEGAPFTAIREASLLKDLK-HANI 65
Query: 160 VKFYNAFEDD---NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV----VR----QM 208
V ++ V+ E LD L +Y + + VR Q+
Sbjct: 66 VTLHDIIHTKKTLTLVF---------EYLDTDL----KQYMDDCGGGLSMHNVRLFLFQL 112
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYY 267
LR A CH ++HRD+KP+N L E LK DFGL+ P K + + V + +Y
Sbjct: 113 LRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSVPSKTYSNEVVTLWY 169
Query: 268 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-----DGIFK---------- 310
P+VL + D+W +G I Y + GR F T+ IF+
Sbjct: 170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETW 229
Query: 311 -EVLRNK-------PDFRRKP----WPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHP 356
V N P + +P P + ++ K L +P+ R++AA+A+ HP
Sbjct: 230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289
Query: 357 W 357
+
Sbjct: 290 Y 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 2e-15
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
T K LG GQFG V K G VA+K I + M + +D E K++ L+ H
Sbjct: 7 TFLKELGSGQFGV--VHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK--DAAVVVRQMLRVAAEC 215
N+V+ Y ++I E G LL+ + +K TE D V + +
Sbjct: 60 NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLES- 118
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYV 268
+G +HRD+ N L ED+ +K +DFGL+ ++ G KF +
Sbjct: 119 --NGFIHRDLAARNCL---VGEDNVVKVSDFGLARYVLDDQYTSSQGTKF-----PVKWA 168
Query: 269 APEVLKR-KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
PEV + +SDVWS GV+ + + G+ P+ + + + V
Sbjct: 169 PPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 3e-15
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 41/291 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ + + + E + + L + L + + + + Q+LR CH ++
Sbjct: 69 LHDIIHTEKSLTLVFEYLD--KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVL 126
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL--KRKSG 278
HRD+KP+N L E LK DFGL+ P K + + V + +Y P++L
Sbjct: 127 HRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYS 183
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------------------NK 316
+ D+W +G I Y + GR F T + + R N
Sbjct: 184 TQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243
Query: 317 PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363
P +R P + + + + KLL + R R++A +A+ HP+ G+
Sbjct: 244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 3e-15
Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 41/278 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G G +AVK+I + ++ KR ++ I V
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRAT-----VNSQEQKRLLMDLDISMRSVDCPYTV 63
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDA----AVVVRQMLRVAAE 214
FY A + V+I ME+ + LD+ K +D AV + + L
Sbjct: 64 TFYGALFREGDVWICMEVMDTS--LDKFYKKVYDKGLTIPEDILGKIAVSIVKALE---- 117
Query: 215 CHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 270
+LH ++HRD+KP N L + +K DFG+S + K D G Y+AP
Sbjct: 118 -YLHSKLSVIHRDVKPSNVL---INRNGQVKLCDFGISGYLVDSVAKTIDA-GCKPYMAP 172
Query: 271 EVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPDFRRK 322
E + + + SDVWS+G IT I L GR P+ W KT K+V+ +
Sbjct: 173 ERINPELNQKGYDVKSDVWSLG-ITMIELATGRFPYDSW-KTPFQQLKQVVEEPSP--QL 228
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P S +DFV K L K+ + R + L HP+
Sbjct: 229 PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 5e-15
Identities = 64/231 (27%), Positives = 95/231 (41%), Gaps = 46/231 (19%)
Query: 95 DRRYTIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
R K LG G FG Y G++VAVK + N D +RE++IL
Sbjct: 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIEIL 60
Query: 151 QALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLD-------RILAKKDSRYTEKDA 201
+ L HEN+VK+ E + + ME G L D +I K+ ++ +
Sbjct: 61 RTLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQ-- 117
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+ + M + ++ +HRD+ N L +S + +K +DFGL+ + K +
Sbjct: 118 --ICKGMDYLGSQ----RYIHRDLAARNILVES---EDLVKISDFGLAKVLPEDKDY--- 165
Query: 262 VGSAYYV-----------APEVLK-RKSGPESDVWSIGVITYILLCGRRPF 300
YYV APE L+ K SDVWS GV Y L P
Sbjct: 166 ----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 6e-15
Identities = 77/280 (27%), Positives = 115/280 (41%), Gaps = 43/280 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---DVKREVKILQALAGHENVV 160
LGHG G Y A +AVK I L I VE + E++IL ++
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIP-----LDITVELQKQIMSELEILYKCDS-PYII 62
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
FY AF +N + I E +GG L + K + A VV+ + +L L
Sbjct: 63 GFYGAFFVENRISICTEFMDGGSL--DVYRKIPEHVLGRIAVAVVKGL------TYLWSL 114
Query: 221 --VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGSAYYVAPE-VLKR 275
+HRD+KP N L + + +K DFG+S + K + VG+ Y+APE +
Sbjct: 115 KILHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLVNSIAKTY---VGTNAYMAPERISGE 168
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------DFRRKPWP 325
+ G SDVWS+G+ L GR P+ I K P D P
Sbjct: 169 QYGIHSDVWSLGISFMELALGRFPYPQ-----IQKNQGSLMPLQLLQCIVDEDPPVLPVG 223
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
S F+ + + K P+ R + HP++ + D +
Sbjct: 224 QFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 1e-14
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + + K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ D + + E + + L + + + + + + + Q+LR A CH ++
Sbjct: 69 LHDIVHTDKSLTLVFEYLD--KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL 126
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS--G 278
HRD+KP+N L E LK DFGL+ P K + + V + +Y P+VL S
Sbjct: 127 HRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 183
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------------------NK 316
+ D+W +G I + + GR F T + + R N
Sbjct: 184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF 243
Query: 317 PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE-GGDASEIPIDI 371
P ++ +P P + + + K L + + R++A +A+ H + R G +P I
Sbjct: 244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHSLPESI 303
Query: 372 SVLN 375
S+ +
Sbjct: 304 SIFS 307
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 2e-14
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 104 LGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQALAG--HEN 158
+G G +G + A D NG R VA+K++ + + +P++ REV +L+ L H N
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLRHLETFEHPN 65
Query: 159 VVKFYNA-----FEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
VV+ ++ + + + + E + LD++ T KD ++ Q+LR
Sbjct: 66 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRG 122
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H H +VHRD+KP+N L S+ + +K DFGL+ +V + +Y APE
Sbjct: 123 LDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPE 179
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-----GIF------------KEVL 313
VL + S D+WS+G I + + R+P + + D I ++V
Sbjct: 180 VLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238
Query: 314 RNKPDFRRKPW-------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ F K I KD + K L +P R++A ALSHP+
Sbjct: 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 73.0 bits (179), Expect = 2e-14
Identities = 69/230 (30%), Positives = 95/230 (41%), Gaps = 47/230 (20%)
Query: 102 KLLGHGQFGYTYVAT------DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
LG G FG Y T + RVAVK + K A + K+E L
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG------ATDQEKKEFLKEAHLMS 54
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQM-LR 210
H N+VK + YI MEL EGG+LL + A+ + + + L
Sbjct: 55 NFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLD 114
Query: 211 VAAECH----LHGLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGS 264
VA C +H +HRD+ N L D+ +K DFGL+ +DI S
Sbjct: 115 VAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYKS 164
Query: 265 AYY------------VAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
YY +APE L K +SDVWS GV+ + IL G++P+
Sbjct: 165 DYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY 214
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 3e-14
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
K S L F + L +E++ +L++ F D D +G I E+ + L + L + E+
Sbjct: 4 KISDLLTF------TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEA 56
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 500
+ ++ + ID + VDF EF+ ++ + + ++ + + AF+ FD D DG+I
Sbjct: 57 EINKLFEEIDAGNET-VDFPEFLTVMSVKLKRGDKEEELRE------AFKLFDKDHDGYI 109
Query: 501 TPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 538
+ ELR G ++ LL+E D D DG I EF++L
Sbjct: 110 SIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153
|
Length = 160 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 4e-14
Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG GQFG + N VAVK ++ M +D E +I++ L H +++
Sbjct: 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQ 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC------ 215
Y + +YI EL + G LL+ L R A+ + Q++ +AA+
Sbjct: 66 LYAVCTLEEPIYIVTELMKYGSLLE-YLQGGAGR------ALKLPQLIDMAAQVASGMAY 118
Query: 216 -HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------PGKKFQDIVGSAYY 267
+HRD+ N L E++ K DFGL+ IK G KF +
Sbjct: 119 LEAQNYIHRDLAARNVL---VGENNICKVADFGLARVIKEDIYEAREGAKF-----PIKW 170
Query: 268 VAPE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
APE L + +SDVWS G+ +T I+ GR P+ T EVL+ R P P
Sbjct: 171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVLQQVDQGYRMPCP 226
Query: 326 S 326
Sbjct: 227 P 227
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 6e-14
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K + G FG Y+ K N AVK ++K MI V V+ E L AL+
Sbjct: 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDAL-ALSKSP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V Y + + N VY+ ME GG++ + L + E+ A + ++ H
Sbjct: 65 FIVHLYYSLQSANNVYLVMEYLIGGDV--KSLLHIYGYFDEEMAVKYISEVALALDYLHR 122
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
HG++HRD+KP+N L + + +K TDFGLS
Sbjct: 123 HGIIHRDLKPDNMLISN---EGHIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 7e-14
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ +VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 12 IGSGQFGLVWLGY-WLEKRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLY 65
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + + E E G L D + A++ E + V M + + +
Sbjct: 66 GVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN----V 121
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + V +PEV K
Sbjct: 122 IHRDLAARNCL---VGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFSK 177
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + + +
Sbjct: 178 YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 7e-14
Identities = 86/323 (26%), Positives = 132/323 (40%), Gaps = 62/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 4 DDDFEKISE----LGAGNGGVVFKVSHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 57
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK---DAAVVVRQ 207
+V FY AF D + I ME +GG LD++L KK R E+ ++ V +
Sbjct: 58 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 114
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L E H ++HRD+KP N L S E +K DFG+S + VG+ Y
Sbjct: 115 GLTYLRE--KHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSY 168
Query: 268 VAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FWDKTEDGIFKEVLR 314
++PE L+ +SD+WS+G+ + GR P F E +
Sbjct: 169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETS 228
Query: 315 NKPDFRRKP----------------------------WPSISNSA--KDFVKKLLVKDPR 344
+P +P PS A +DFV K L+K+P
Sbjct: 229 PRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPA 288
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ +A E+
Sbjct: 289 ERADLKQLMVHAFIKR-SEAEEV 310
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 7e-14
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F +RY ++LG G FG Y Y + G+ VAVK +++ K+E+
Sbjct: 1 FHKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEIN 58
Query: 149 ILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
IL+ L HEN+VK+ + + + ME G L D Y K + +
Sbjct: 59 ILKTLY-HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD---------YLPKHKLNLAQ 108
Query: 207 QMLRVAAEC----HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-- 258
+L C +LH +HRD+ N L + D +K DFGL+ + G ++
Sbjct: 109 LLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYR 165
Query: 259 --QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 294
+D ++ A E LK K SDVWS GV Y LL
Sbjct: 166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
TI K++G G+FG K G + VA+K + +K ++ D E I+
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRL-------DFLTEASIM 59
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D+ L + D ++T + MLR
Sbjct: 60 GQFD-HPNIIRLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFT----VGQLVGMLR 113
Query: 211 -VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--- 263
+A+ VHRD+ N L S + K +DFGLS ++ + G
Sbjct: 114 GIASGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRRLEDSEATYTTKGGKI 170
Query: 264 SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ APE + RK SDVWS G++ + ++ G RP+WD + + K V
Sbjct: 171 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 66/312 (21%), Positives = 113/312 (36%), Gaps = 72/312 (23%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA----- 152
IGK + +A K VAVKKI + K ++K+LQ
Sbjct: 4 TLIGKCFEDLMIVH--LAKHKPTNTLVAVKKINLDSC--------SKEDLKLLQQEIITS 53
Query: 153 -LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR- 210
H N++ + +F D+ +Y+ L G D + + + E + + +L+
Sbjct: 54 RQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL----KTHFPEGLPELAIAFILKD 109
Query: 211 -VAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGS 264
+ A ++H G +HR +K + L K GL IK GK+ + +
Sbjct: 110 VLNALDYIHSKGFIHRSVKASHILL-----SGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164
Query: 265 A-------YYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDK------TED-- 306
+++PEVL+ + +SD++S+G+ L G PF D E
Sbjct: 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR 224
Query: 307 ---------GIFKEVLRNKPDFRRK---PWPSISNSAK----------DFVKKLLVKDPR 344
+ + R P S FV+ L +DP
Sbjct: 225 GTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPE 284
Query: 345 ARLTAAQALSHP 356
+R +A+Q L+H
Sbjct: 285 SRPSASQLLNHS 296
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 38/278 (13%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAGHE 157
+G G FG K +G +AVK+I EK + L + ++ V R
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC-------P 63
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTE----KDAAVVVRQMLRV 211
+VKFY A + +I MEL + + + S E K A V+
Sbjct: 64 YIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVK----- 118
Query: 212 AAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 267
A +L ++HRD+KP N L + ++K DFG+S + K +D G Y
Sbjct: 119 -ALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVDSIAKTRD-AGCRPY 173
Query: 268 VAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRR 321
+APE + + SDVWS+G+ Y + G+ P+ W+ D + + V + P
Sbjct: 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSN 233
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S S +F+ L+KD R + L HP+++
Sbjct: 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 59/221 (26%), Positives = 88/221 (39%), Gaps = 48/221 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG--- 155
+G +G G+FG + + G +VAVK + K + QA
Sbjct: 9 KLGATIGKGEFGDVMLGDYR--GQKVAVKCL--------------KDDSTAAQAFLAEAS 52
Query: 156 ------HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
H N+V+ N +YI E G L+D + + A + + Q L
Sbjct: 53 VMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL-------RSRGRAVITLAQQL 105
Query: 210 RVA-----AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
A +L VHRD+ N L ED K +DFGL+ K + QD
Sbjct: 106 GFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLA---KEASQGQDSG 159
Query: 263 G-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
+ APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-13
Identities = 69/211 (32%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF+R LG G G K +G +A K I I P + RE+++L
Sbjct: 4 DDDFERISE----LGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 57
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+V FY AF D + I ME +GG LD++L K+ R E+ V +LR
Sbjct: 58 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KEAKRIPEEILGKVSIAVLR 114
Query: 211 -VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+A H ++HRD+KP N L S E +K DFG+S + VG+ Y++
Sbjct: 115 GLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMS 170
Query: 270 PEVLK-RKSGPESDVWSIGVITYILLCGRRP 299
PE L+ +SD+WS+G+ L GR P
Sbjct: 171 PERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-13
Identities = 79/285 (27%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED 142
T YD +F R + GK LG G FG AT AV K+ KM+ P A
Sbjct: 22 TQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAV-KMLKPTAHSS 80
Query: 143 VKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
+ E+KI+ L HEN+V A + + E C G+LL+ + K++S T
Sbjct: 81 EREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTL 140
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
+D Q+ + A +HRD+ N L K +K DFGL+ I +
Sbjct: 141 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK---IVKICDFGLARDIMNDSNY 197
Query: 259 QDIV-GSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 311
+V G+A ++APE + ESDVWS G++ + I G P+ D F +
Sbjct: 198 --VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK 255
Query: 312 VLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
+++ +P+ I + D DP R T Q
Sbjct: 256 LIKEGYRMAQPEHAPAEIYDIMKTCWDA-------DPLKRPTFKQ 293
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 4e-13
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 99 TIGKLLGHGQFGYTYVAT-DKANGDRVAVK-KIEKNKMILPIAVEDVKREVKILQALAGH 156
T+G+ +G GQFG Y +++AV K KN + E +E I++ H
Sbjct: 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR-EKFLQEAYIMRQF-DH 66
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AEC 215
++VK ++ V+I MEL GEL + K S D A ++ +++ A
Sbjct: 67 PHIVKLIGVITENP-VWIVMELAPLGELRSYLQVNKYSL----DLASLILYSYQLSTALA 121
Query: 216 HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS--AYYVAPE 271
+L VHRD+ N L S +K DFGLS +++ ++ G ++APE
Sbjct: 122 YLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPE 178
Query: 272 VLK-RKSGPESDVWSIGVITY-ILLCGRRPF-WDKTEDGIFK 310
+ R+ SDVW GV + IL+ G +PF K D I +
Sbjct: 179 SINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR 220
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 4e-13
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 54/233 (23%)
Query: 104 LGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++ + + + VAVK +++ A +D +RE ++L HEN
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKE--TASNDARKDFEREAELLTNF-QHEN 69
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLD---------RILAKKDSRYTEKDAAVVVRQML 209
+VKFY + + + E E G+L L DS E + + Q+L
Sbjct: 70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE----LTLSQLL 125
Query: 210 RVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++A + +L VHRD+ N L D +K DFG+S +D+
Sbjct: 126 QIAVQIASGMVYLASQHFVHRDLATRNCL---VGYDLVVKIGDFGMS---------RDVY 173
Query: 263 GSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
+ YY + PE ++ RK ESDVWS GV+ + I G++P++
Sbjct: 174 TTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 7e-13
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 54/293 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K NG VA+K ++++ + A+ RE +L+ L H N+V
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAI----REASLLKGLK-HANIVL 67
Query: 162 FYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
++ + Y+ +LC+ + K ++ + + Q+LR + H
Sbjct: 68 LHDIIHTKETLTLVFEYVHTDLCQ-------YMDKHPGGLHPENVKLFLFQLLRGLSYIH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR 275
++HRD+KP+N L E LK DFGL+ P + + V + +Y P+VL
Sbjct: 121 QRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLG 177
Query: 276 KSGPES--DVWSIGVITYILLCGRRPF--WDKTEDGIFKEVL-------------RNKPD 318
+ + D+W +G I ++ G F +D + + L + P
Sbjct: 178 STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237
Query: 319 FR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPW 357
F+ R+ W +S N A+D KLL P+ RL+A ALSH +
Sbjct: 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 7e-13
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKR 145
++K F +R + LG G FG + GD VAVK ++ IA D+K+
Sbjct: 1 FEKRFLKRI---RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKK 55
Query: 146 EVKILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGG---ELLDRILAKKDSRYTEKD 200
E++IL+ L HEN+VK+ +D N + + ME G E L R K + + K
Sbjct: 56 EIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKY 114
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-- 258
A + + M + + + VHRD+ N L +S + +K DFGL+ I+ K++
Sbjct: 115 AVQICKGMDYLGSRQY----VHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEYYT 167
Query: 259 --QDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 294
D+ ++ APE L + K SDVWS GV Y LL
Sbjct: 168 VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 8e-13
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ T K LG GQFG + D VA+K I++ M + ++ E K++ L+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMKLS- 57
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
HE +V+ Y +YI E G LL+ L + R+ + + + A
Sbjct: 58 HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN-YLREHGKRFQPSQLLEMCKDVCEGMAYL 116
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEV 272
+HRD+ N L +K +DFGLS ++ ++ VGS + V PEV
Sbjct: 117 ESKQFIHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEV 172
Query: 273 LKR-KSGPESDVWSIGVITY-ILLCGRRPF 300
L K +SDVW+ GV+ + + G+ P+
Sbjct: 173 LLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG------YTEKQRRDFLSEASIMGQ 61
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM---LR 210
H N++ V I E E G L D L + D ++T ++R + ++
Sbjct: 62 FDHPNIIHLEGVVTKSRPVMIITEFMENGAL-DSFLRQNDGQFTVIQLVGMLRGIAAGMK 120
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS------ 264
+E + VHRD+ N L S + K +DFGLS F++ S
Sbjct: 121 YLSEMNY---VHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIP 174
Query: 265 AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+ APE + RK SDVWS G++ + ++ G RP+WD + + + + D+R
Sbjct: 175 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI---EQDYRLP 231
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
P + + KD AR Q +S
Sbjct: 232 PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVK 148
I K++G G+FG K G R VA+K + EK + D E
Sbjct: 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR-------RDFLSEAS 57
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
I+ H N++ V I E E G L D L K D ++T + + M
Sbjct: 58 IMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFT----VIQLVGM 111
Query: 209 LRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
LR A + G VHRD+ N L S + K +DFGLS + +D +
Sbjct: 112 LRGIASGMKYLSDMGYVHRDLAARNILVNS---NLVCKVSDFGLS------RVLEDDPEA 162
Query: 265 AY----------YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
AY + APE + RK SDVWS G++ + ++ G RP+W+ + + K +
Sbjct: 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI 222
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 66/208 (31%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHE 157
+ +G G FG Y K N + VAVK + LP D+KR E +IL+ H
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTE-VAVKTC---RSTLP---PDLKRKFLQEAEILKQYD-HP 52
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK-------DAAVVVRQMLR 210
N+VK +YI MEL GG LL L KK +R T K DAA M
Sbjct: 53 NIVKLIGVCVQKQPIYIVMELVPGGSLLT-FLRKKKNRLTVKKLLQMSLDAAA---GMEY 108
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD------FIKPGKKFQDIVGS 264
+ ++ +HRD+ N L E++ LK +DFG+S + Q +
Sbjct: 109 LESKN----CIHRDLAARNCL---VGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK- 160
Query: 265 AYYVAPEVLKR-KSGPESDVWSIGVITY 291
+ APE L + ESDVWS G++ +
Sbjct: 161 --WTAPEALNYGRYTSESDVWSYGILLW 186
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 4e-12
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+G+++G G+FG V + G +VAVK I+ + + + E ++ L H+N
Sbjct: 9 TLGEIIGEGEFGA--VLQGEYTGQKVAVKNIKCD-----VTAQAFLEETAVMTKLH-HKN 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
+V+ N +YI MEL G L++ + T A V V Q+L+ + +
Sbjct: 61 LVRLLGVILH-NGLYIVMELMSKGNLVNFL-------RTRGRALVSVIQLLQFSLDVAEG 112
Query: 216 --HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAP 270
+L LVHRD+ N L ED K +DFGL+ + G D + AP
Sbjct: 113 MEYLESKKLVHRDLAARNIL---VSEDGVAKVSDFGLA---RVGSMGVDNSKLPVKWTAP 166
Query: 271 EVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
E LK +K +SDVWS GV+ + + GR P+
Sbjct: 167 EALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 4e-12
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLH--GL 220
+ YI E G LLD + ++ E +A V++ +++ A +L
Sbjct: 69 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 125
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 126 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 181
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 182 FSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKILQAL 153
K++G G+FG + K G + VA+K + EK + +D E I+
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR-------QDFLSEASIMGQF 63
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR--V 211
+ H N+++ I E E G L D+ L D ++ + + MLR
Sbjct: 64 S-HHNIIRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFS----SYQLVGMLRGIA 117
Query: 212 AAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA-- 265
A +L + VHRD+ N L S E K +DFGLS ++ P + G
Sbjct: 118 AGMKYLSDMNYVHRDLAARNILVNSNLE---CKVSDFGLSRVLEDDPEGTYTTSGGKIPI 174
Query: 266 YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
+ APE + RK SDVWS G++ + ++ G RP+WD + EV++ D R P
Sbjct: 175 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HEVMKAINDGFRLP 230
Query: 324 WPSISNSA 331
P SA
Sbjct: 231 APMDCPSA 238
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 6e-12
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 29/202 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHE 157
+LLG G FG + T K + VAVK +++ LP +++K E +IL+ H
Sbjct: 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED---LP---QELKIKFLSEARILKQY-DHP 52
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA---AE 214
N+VK +YI MEL GG+ L + KKD T++ +V+ L A A
Sbjct: 53 NIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQ----LVKFALDAAAGMAY 108
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----DFIKPGKKFQDIVGSAYYVAP 270
+HRD+ N L E++ LK +DFG+S D I + I + AP
Sbjct: 109 LESKNCIHRDLAARNCL---VGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAP 163
Query: 271 EVLKR-KSGPESDVWSIGVITY 291
E L + ESDVWS G++ +
Sbjct: 164 EALNYGRYSSESDVWSYGILLW 185
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 9e-12
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 50/231 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK + K A +D +RE ++L L H++
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTVLQ-HQH 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTE--KDAA---VVVRQMLRV 211
+V+FY + + + E G+L +R L D++ +D A + + QML +
Sbjct: 69 IVRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAI 127
Query: 212 AAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
A++ +L L VHRD+ N L + +K DFG+S +DI +
Sbjct: 128 ASQIASGMVYLASLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------RDIYST 175
Query: 265 AYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
YY + PE +L RK ESD+WS GV+ + I G++P++
Sbjct: 176 DYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 94 FDRRYTIG-KLLGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ + LG G FG Y G+ VAVKK++ + + D +RE++
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIE 57
Query: 149 ILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKK---DSRYTEKDA 201
IL++L H+N+VK+ Y+A + + ME G L D + + D R A
Sbjct: 58 ILKSLQ-HDNIVKYKGVCYSA--GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYA 114
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+ + + M + ++ + VHRD+ N L +S ++ +K DFGL+ + K++ +
Sbjct: 115 SQICKGMEYLGSKRY----VHRDLATRNILVES---ENRVKIGDFGLTKVLPQDKEYYKV 167
Query: 262 V----GSAYYVAPEVL-KRKSGPESDVWSIGVITYIL 293
++ APE L + K SDVWS GV+ Y L
Sbjct: 168 REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 1e-11
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 61/363 (16%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K + +++++ K D ++ ++ Y +G ++G+G FG Y A ++
Sbjct: 34 KLDEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEK 93
Query: 124 VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF--------EDDNYVYIA 175
VA+KK+ ++ + RE+ I++ L H N++ + + E + ++ +
Sbjct: 94 VAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNEKNIFLNVV 145
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAV---VVR----QMLRVAAECHLHGLVHRDMKPE 228
M E + + + K Y + A+ +V+ Q+ R A H + HRD+KP+
Sbjct: 146 M------EFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQ 199
Query: 229 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSI 286
N L +LK DFG + + G++ + S +Y APE++ + + D+WS+
Sbjct: 200 NLLIDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSL 257
Query: 287 GVITYILLCGRRPFWDK----------------TEDGIFKEVLRNKPDFR---------R 321
G I ++ G F + TED + KE+ N D + +
Sbjct: 258 GCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL-KEMNPNYADIKFPDVKPKDLK 316
Query: 322 KPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS-EIPIDISVLNNMRQ 379
K +P + A +F+ + L +P RL +AL+ P+ + D ++P I L ++
Sbjct: 317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFN 376
Query: 380 FVK 382
F
Sbjct: 377 FCD 379
|
Length = 440 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 37/206 (17%)
Query: 102 KLLGHGQFGYTYVAT-DKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG + G VAVK ++ +K L ++D +E I+ +L HEN
Sbjct: 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK--LSDIMDDFLKEAAIMHSLD-HEN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA---AEC 215
+++ Y + + EL G LLDR+ + + + +++A
Sbjct: 58 LIRLYGVVLTHPLMMVT-ELAPLGSLLDRL---RKDALGHFLISTLCDYAVQIANGMRYL 113
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 268
+HRD+ N L S + +K DFGL + + +YV
Sbjct: 114 ESKRFIHRDLAARNILLASDDK---VKIGDFGLMRALPQNED--------HYVMEEHLKV 162
Query: 269 -----APEVLK-RKSGPESDVWSIGV 288
APE L+ R SDVW GV
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGV 188
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ + LG GQFG ++ T NG +VAVK ++ M + E +E +I++ L H+
Sbjct: 10 LERKLGAGQFGEVWMGT--WNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDK 62
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD-----AAVVVRQMLRVAA 213
+V+ Y ++ +YI E G LLD L + + AA + M + +
Sbjct: 63 LVQLYAVCSEEEPIYIVTEYMSKGSLLD-FLKSGEGKKLRLPQLVDMAAQIAEGMAYLES 121
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-------GKKFQDIVGSAY 266
+HRD+ N L E+ K DFGL+ I+ G KF
Sbjct: 122 R----NYIHRDLAARNIL---VGENLVCKIADFGLARLIEDDEYTAREGAKF-----PIK 169
Query: 267 YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+ APE + +SDVWS G++ I+ GR P+
Sbjct: 170 WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG ++ +A +VA+K I + M + ED E K++ L+ H
Sbjct: 7 TFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPK 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHL 217
+V+ Y +YI E E G LL+ L ++ + + KD + + Q + E
Sbjct: 61 LVQLYGVCTQQKPLYIVTEFMENGCLLN-YLRQRQGKLS-KDMLLSMCQDVCEGMEYLER 118
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAP 270
+ +HRD+ N L S +K +DFG++ ++ G KF + P
Sbjct: 119 NSFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTSSSGAKF-----PVKWSPP 170
Query: 271 EVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
EV K +SDVWS GV+ + + G+ PF K+ + + + R +R K
Sbjct: 171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPK 224
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y + +YI E G LLD + + + + Q+ A +
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L E K DFGL+ I + G KF + APE +
Sbjct: 126 HRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 177
Query: 275 RKSGP-ESDVWSIGVITY-ILLCGRRPF 300
S +SDVWS G++ Y I+ G+ P+
Sbjct: 178 FGSFTIKSDVWSFGILLYEIVTYGKIPY 205
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+T+ + LG G FG + K N RVA+K ++ + ++ +D ++EV+ L+ L H+
Sbjct: 8 FTLERKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLL---KQQDFQKEVQALKRLR-HK 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE--- 214
+++ + VYI EL E G LL L + + + V ++ +A +
Sbjct: 63 HLISLFAVCSVGEPVYIITELMEKGSLLA-FLRSPEGQ------VLPVASLIDMACQVAE 115
Query: 215 --CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----- 265
+L +HRD+ N L ED K DFGL+ IK +D+ S+
Sbjct: 116 GMAYLEEQNSIHRDLAARNIL---VGEDLVCKVADFGLARLIK-----EDVYLSSDKKIP 167
Query: 266 -YYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+ APE +SDVWS G++ Y + G+ P+ ++ ++ R
Sbjct: 168 YKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG----YRM 223
Query: 323 PWPS 326
P P+
Sbjct: 224 PCPA 227
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 12 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+A +YI E G LLD + + + S+ Q+ A +
Sbjct: 66 L-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L ++ K DFGL+ I + G KF + APE +
Sbjct: 125 HRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 176
Query: 275 RKSGP-ESDVWSIGV-ITYILLCGRRPF 300
S +SDVWS G+ + I+ GR P+
Sbjct: 177 FGSFTIKSDVWSFGILLMEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 3e-11
Identities = 73/293 (24%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHE 157
+ LG G + Y + NG VA+K I E V RE +L+ L H
Sbjct: 11 EKLGEGSYATVYKGISRINGQLVALKVISMK------TEEGVPFTAIREASLLKGLK-HA 63
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V ++ + E L + + + + + + Q+LR A H
Sbjct: 64 NIVLLHDIIHTKETLTFVFEYMHTD--LAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG 121
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL--K 274
++HRD+KP+N L E LK DFGL+ P + + V + +Y P+VL
Sbjct: 122 QHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA 178
Query: 275 RKSGPESDVWSIGVITYILLCGRRPF-------------WD----KTED---GIFKEVLR 314
D+W G I +L G+ F W TED G+ K +
Sbjct: 179 TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK-LPN 237
Query: 315 NKPDFRRKP--------WPSISN--SAKDFVKKLLVKDPRARLTAAQALSHPW 357
KP++ W +S A+D ++L+ P+ R++A AL HP+
Sbjct: 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 3e-11
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 144 KREVKILQALAGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+RE + L H N+V ++ E ++ E G L + + A D +
Sbjct: 26 RRETALCARLY-HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAA--DGALPAGETG 82
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 260
++ Q+L A H G+VHRD+KP+N + K DFG+ + PG + D
Sbjct: 83 RLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVRDADVA 141
Query: 261 -------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
++G+ Y APE L+ + P SD+++ G+I L G+R + I +
Sbjct: 142 TLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAEILYQQ 201
Query: 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
L + D PW + + ++K L KDPR R +A AL
Sbjct: 202 L-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 61/238 (25%), Positives = 90/238 (37%), Gaps = 52/238 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKA-NGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAG 155
T+ + LGHG FG Y + +GD V V + D E I+
Sbjct: 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN- 67
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLR 210
H+N+V+ + +I +EL GG+L +R ++ S T KD R
Sbjct: 68 HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARD--- 124
Query: 211 VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
VA C + +HRD+ N L K DFG++ +DI ++YY
Sbjct: 125 VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRASYY 175
Query: 268 VAPEVLKRKSG----------PE----------SDVWSIGVITY-ILLCGRRPFWDKT 304
RK G PE +DVWS GV+ + I G P+ +T
Sbjct: 176 -------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
K+LG G FG Y G++ VA+K + + P A +++ E ++ A
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVM-ASVD 67
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H +VV+ I +L G LLD + KD + Q+ + +
Sbjct: 68 HPHVVRLLGICLSSQVQLIT-QLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYL 125
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE- 271
LVHRD+ N L K+ +K TDFGL+ + +K G ++A E
Sbjct: 126 EEKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALES 182
Query: 272 VLKRKSGPESDVWSIGVITYILLC-GRRPF 300
+L R +SDVWS GV + L+ G +P+
Sbjct: 183 ILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
+LR+ F D D +G+IS +E++ AL K L L E + E+++ +D + DG +DF EF+
Sbjct: 1 ELREAFRLFDKDGDGTISADELKAAL-KSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFL 59
Query: 465 AA 466
Sbjct: 60 EL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 4e-11
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ +VA+K +++ M + E E +++ L H +V+
Sbjct: 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y A +YI E E G L+D + + + T + Q+ A +
Sbjct: 66 LY-AVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYI 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLK 274
HRD++ N L E K DFGL+ I+ G KF + APE +
Sbjct: 125 HRDLRAANIL---VSETLCCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAIN 176
Query: 275 RKS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
+ +SDVWS G+ +T I+ GR P+ T EV++N R P P
Sbjct: 177 YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLERGYRMPRP 225
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-11
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
+ AF FD D DG I+ +EL+ G ID ++ E D D DG+I EF L+
Sbjct: 3 REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
Query: 540 R 540
Sbjct: 63 A 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 8e-11
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK-NKMILPIAVEDVKRE--VKILQALA 154
YT+ K L G G +VAT D V +K +K +I + +++V +++ L
Sbjct: 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLV 127
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ D Y Y L K+ A ++ +Q+L
Sbjct: 128 SGAITCMVLPHYSSDLYTY---------------LTKRSRPLPIDQALIIEKQILEGLRY 172
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H ++HRD+K EN + D G + F F + G+ APEVL
Sbjct: 173 LHAQRIIHRDVKTENIFINDV---DQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLA 229
Query: 275 R-KSGPESDVWSIGVITYILL 294
R K ++D+WS G++ + +L
Sbjct: 230 RDKYNSKADIWSAGIVLFEML 250
|
Length = 357 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN---V 159
++G G FG Y G A+K ++K ++ + E + +I+ +L + +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFI 59
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V AF + + ++L GG+L + + ++EK+ +++ H
Sbjct: 60 VCMTYAFHTPDKLCFILDLMNGGDLHYHL--SQHGVFSEKEMRFYATEIILGLEHMHNRF 117
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSG 278
+V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL++ +
Sbjct: 118 VVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGTA 172
Query: 279 PES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
+S D +S+G + + LL G PF KT+D E+ R + S S K +
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTVNVELPDSFSPELKSLL 230
Query: 336 KKLLVKDPRARL 347
+ LL +D RL
Sbjct: 231 EGLLQRDVSKRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +++ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ +D + G
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAM-RSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 458 VDFSEFV-AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI 515
+DF EF+ T + E D + L+ AF FD D+ G I+ + L R+ L +I
Sbjct: 70 IDFEEFLDIMTKKLG---ERDPREEILK---AFRLFDDDKTGKISLKNLKRVAKELGETI 123
Query: 516 D-----PLLEEADIDKDGRISLSEFRRLLRTASIS 545
+++EAD + DG IS EF R+++ ++
Sbjct: 124 TDEELQEMIDEADRNGDGEISEEEFYRIMKKTNLF 158
|
Length = 158 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV-------KR-----E 146
T+ + LG G FG Y K + K + +A++ V +R E
Sbjct: 9 TLIRELGQGSFGMVYEGL---------AKGVVKGEPETRVAIKTVNENASMRERIEFLNE 59
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVV 205
+++ H +VV+ + MEL G+L + +++ ++ +
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118
Query: 206 RQMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
++ +++AAE +L VHRD+ N + ED ++K DFG++
Sbjct: 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARNCM---VAEDLTVKIGDFGMT--------- 166
Query: 259 QDIVGSAYY------------VAPEVLKRKSG---PESDVWSIGVITY-ILLCGRRPFWD 302
+DI + YY +APE LK G +SDVWS GV+ + + +P+
Sbjct: 167 RDIYETDYYRKGGKGLLPVRWMAPESLK--DGVFTTKSDVWSFGVVLWEMATLAEQPYQG 224
Query: 303 KTEDGIFKEVLRNK 316
+ + + K V+
Sbjct: 225 LSNEEVLKFVIDGG 238
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVA----TDKANGDR---VAVKKIEKN 132
+P R +F DK T+GK LG G FG +A DK VAVK ++ +
Sbjct: 4 LPEDPRWEFSRDK-----LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD 58
Query: 133 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 192
++ D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 59 ATEKDLS--DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 116
Query: 193 --------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
D + T KD Q+ R +HRD+ N L E+
Sbjct: 117 PPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL---VTEN 173
Query: 239 SSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-IL 293
+ +K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I
Sbjct: 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 233
Query: 294 LCGRRPFWDKTEDGIFK 310
G P+ + +FK
Sbjct: 234 TLGGSPYPGIPVEELFK 250
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 82/318 (25%), Positives = 127/318 (39%), Gaps = 68/318 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSAC-----REIALLRELK-HPN 59
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------VVRQML 209
V+ F D V++ + E +L I + S+ +K + ++ Q+L
Sbjct: 60 VIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118
Query: 210 RVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKFQDIVGS 264
H + ++HRD+KP N L E +K D G + +KP +V +
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 178
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDKTEDGIF 309
+Y APE+L R D+W+IG I LL PF D IF
Sbjct: 179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238
Query: 310 K----------EVLRNKP-------DFRRKPWPS-----------ISNSAKDFV--KKLL 339
E +R P DFRR + + + +K F+ +KLL
Sbjct: 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLL 298
Query: 340 VKDPRARLTAAQALSHPW 357
DP R+T+ QAL P+
Sbjct: 299 TMDPTKRITSEQALQDPY 316
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 2e-10
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAV---KMLKSDATEKDLSDLISEME 75
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DS 194
+++ + H+N++ A D +Y+ +E G L + + A++ +
Sbjct: 76 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEE 135
Query: 195 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DF 251
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 136 QLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHH 192
Query: 252 IKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 309
I KK + ++APE L R +SDVWS GV+ + I G P+ + +F
Sbjct: 193 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252
Query: 310 K 310
K
Sbjct: 253 K 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG+GQFG ++ T N +VAVK ++ M + E E +I++ L H+ +V+
Sbjct: 12 KKLGNGQFGEVWMGTWNGN-TKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQ 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGL 220
Y A + +YI E G LLD L + R + V + Q+ A
Sbjct: 66 LY-AVVSEEPIYIVTEYMSKGSLLD-FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 272
+HRD++ N L + K DFGL+ I + G KF + APE
Sbjct: 124 IHRDLRSANIL---VGDGLVCKIADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAA 175
Query: 273 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN-S 330
L + +SDVWS G+ +T ++ GR P+ + ++V R R P P S
Sbjct: 176 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG----YRMPCPQDCPIS 231
Query: 331 AKDFVKKLLVKDPRARLT 348
+ + + KDP R T
Sbjct: 232 LHELMLQCWKKDPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 39/206 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVKF 162
+G G FG + +A+ VAVK + LP ++ +E +IL+ + H N+V+
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYS-HPNIVRL 58
Query: 163 YNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+YI MEL +GG+ L R+ K+ + E AA M + ++
Sbjct: 59 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAA----GMEYLESKH 114
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY--------- 266
+HRD+ N L E + LK +DFG+S ++ +D V ++
Sbjct: 115 ----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEEDGVYASTGGMKQIPVK 161
Query: 267 YVAPEVLKR-KSGPESDVWSIGVITY 291
+ APE L + ESDVWS G++ +
Sbjct: 162 WTAPEALNYGRYSSESDVWSFGILLW 187
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 3e-10
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 23/255 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN---V 159
++G G FG Y G A+K ++K ++ + E + +I+ +L + +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFI 59
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V AF + + ++L GG+L + + ++E + +++ H
Sbjct: 60 VCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEAEMRFYAAEIILGLEHMHNRF 117
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSG 278
+V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL++
Sbjct: 118 VVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVA 172
Query: 279 PES--DVWSIGVITYILLCGRRPFWD-KTEDG--IFKEVLRNKPDFRRKPWP-SISNSAK 332
+S D +S+G + + LL G PF KT+D I + L + P S S +
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-----LPDSFSPELR 227
Query: 333 DFVKKLLVKDPRARL 347
++ LL +D RL
Sbjct: 228 SLLEGLLQRDVNRRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 61/274 (22%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHEN 158
++G G FG A K +G ++ KM+ A E+ R E+++L L H N
Sbjct: 9 VIGEGNFGQVIRAMIKKDGLKMNAAI----KMLKEFASENDHRDFAGELEVLCKLGHHPN 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA----------VVVRQM 208
++ A E+ Y+YIA+E G LLD + + SR E D A + +Q+
Sbjct: 65 IINLLGACENRGYLYIAIEYAPYGNLLDFL---RKSRVLETDPAFAKEHGTASTLTSQQL 121
Query: 209 LRVAAECH--LHGL-----VHRDMKPENFLFKSAKEDSSLKATDFGLS--DFIKPGKKFQ 259
L+ A++ + L +HRD+ N L E+ + K DFGLS + + K
Sbjct: 122 LQFASDVATGMQYLSEKQFIHRDLAARNVL---VGENLASKIADFGLSRGEEVYVKKTMG 178
Query: 260 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF--------WDKTEDG-- 307
+ ++A E L +SDVWS GV+ + I+ G P+ ++K G
Sbjct: 179 RL--PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236
Query: 308 -------------IFKEVLRNKPDFRRKPWPSIS 328
+ ++ R++P + R P+ IS
Sbjct: 237 MEKPRNCDDEVYELMRQCWRDRP-YERPPFAQIS 269
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 49/239 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
R + + LG G FG ++A + + VAVK ++ + A +D +RE ++L
Sbjct: 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELL 61
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAV 203
L HE++VKFY D + + + E + G+L + A D + + +
Sbjct: 62 TNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 120
Query: 204 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
+ QML +A++ +L VHRD+ N L + + +K DFG+S
Sbjct: 121 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS------- 170
Query: 257 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
+D+ + YY + PE ++ RK ESDVWS GVI + I G++P++
Sbjct: 171 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 4e-10
Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 43/248 (17%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHEN 158
++G G FG A K +G ++ K + A +D R E+++L L H N
Sbjct: 2 VIGEGNFGQVLKARIKKDG----LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA----------VVVRQM 208
++ A E Y+Y+A+E G LLD + + SR E D A + +Q+
Sbjct: 58 IINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQL 114
Query: 209 LRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
L AA+ G+ +HRD+ N L E+ K DFGLS + K
Sbjct: 115 LHFAADV-ARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRGQEVYVKKTM 170
Query: 261 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF--------WDKTEDGIFK 310
++A E L SDVWS GV+ + I+ G P+ ++K G
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 230
Query: 311 EVLRNKPD 318
E N D
Sbjct: 231 EKPLNCDD 238
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 7e-10
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 33/257 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG +VA+K ++ M E +E +I++ L H+ +V
Sbjct: 14 LGQGCFGEVWMGT--WNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLR-HDKLVPL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y A + +YI E G LLD L + D +Y + V + Q+ A +
Sbjct: 67 Y-AVVSEEPIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L ++ K DFGL+ I + G KF + APE L
Sbjct: 125 HRDLRAANIL---VGDNLVCKIADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 176
Query: 274 KRKSGPESDVWSIGVI-TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSA 331
+ +SDVWS G++ T ++ GR P+ + ++V R R P P S
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG----YRMPCPQGCPESL 232
Query: 332 KDFVKKLLVKDPRARLT 348
+ +K KDP R T
Sbjct: 233 HELMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 8e-10
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVA------TDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKI 149
R T+GK LG G FG +A DK N VAVK ++ + ++ D+ E+++
Sbjct: 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLS--DLVSEMEM 70
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 71 MKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255
T KD Q+ R +HRD+ N L ED+ +K DFGL+ +
Sbjct: 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL---VTEDNVMKIADFGLARDVHNI 187
Query: 256 KKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
++ ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 188 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 8e-10
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVA----TDKANGDR---VAVKKIEKNKMILPIAVEDVK 144
+F R R +GK LG G FG A DK+ D+ VAVK ++ N +A D+
Sbjct: 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLA--DLI 65
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------------ 192
E+++++ + H+N++ + +Y+ +E G L + + A++
Sbjct: 66 SEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITK 125
Query: 193 --DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 249
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 126 VPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL---VTEDNVMKIADFGLAR 182
Query: 250 --DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
I KK + ++APE L R +SDVWS G++ + I G P+
Sbjct: 183 GVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 1e-09
Identities = 79/318 (24%), Positives = 126/318 (39%), Gaps = 68/318 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSAC-----REIALLRELK-HPN 59
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------VVRQML 209
V+ F D V++ + E +L I + S+ +K + ++ Q+L
Sbjct: 60 VISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 118
Query: 210 RVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKFQDIVGS 264
H + ++HRD+KP N L E +K D G + +KP +V +
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 178
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDKTEDGIF 309
+Y APE+L R D+W+IG I LL P+ D IF
Sbjct: 179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238
Query: 310 K----------EVLRNKP-------DFRRKPWPSIS-------------NSAKDFVKKLL 339
E ++ P DFRR + + S + A ++KLL
Sbjct: 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 298
Query: 340 VKDPRARLTAAQALSHPW 357
DP R+T+ QA+ P+
Sbjct: 299 TMDPIKRITSEQAMQDPY 316
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 33/257 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 14 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y A + +YI E G LLD L + +Y V + Q+ A V
Sbjct: 67 Y-AVVSEEPIYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 124
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 125 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 176
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSA 331
+ +SDVWS G+ +T + GR P+ + +V R R P P S
Sbjct: 177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPESL 232
Query: 332 KDFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 233 HDLMCQCWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 33/201 (16%)
Query: 104 LGHGQFGYT---YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LGHG FG VAVK +++ + ++ RE ++ L H +V
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI--AAGKKEFLREASVMAQL-DHPCIV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ + + + + MEL G LL + KK D + Q+ A
Sbjct: 60 RLIGVCKGEPLMLV-MELAPLGPLLKYL--KKRREIPVSDLKELAHQVAMGMAYLESKHF 116
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------V 268
VHRD+ N L + K +DFG+S + G S YY
Sbjct: 117 VHRDLAARNVLLVN---RHQAKISDFGMSRALGAG--------SDYYRATTAGRWPLKWY 165
Query: 269 APEVLK-RKSGPESDVWSIGV 288
APE + K +SDVWS GV
Sbjct: 166 APECINYGKFSSKSDVWSYGV 186
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 58/247 (23%)
Query: 93 DFDR-RYTIGKLLGHGQFGY----TYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKRE 146
+ R R T+GK LG G FG V D N VAVK ++ + ++ D+ E
Sbjct: 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLS--DLVSE 65
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------------- 192
+++++ + H+N++ + +Y+ +E G L D + A++
Sbjct: 66 MEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125
Query: 193 DSRYTEKD----AAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247
+ T+KD A V R M +A++ C +HRD+ N L ED +K DFG
Sbjct: 126 EETLTQKDLVSFAYQVARGMEFLASKKC-----IHRDLAARNVL---VTEDHVMKIADFG 177
Query: 248 LSDFIKPGKKFQDIVGSAYY------------VAPEVL-KRKSGPESDVWSIGVITY-IL 293
L+ +DI YY +APE L R +SDVWS GV+ + I
Sbjct: 178 LA---------RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228
Query: 294 LCGRRPF 300
G P+
Sbjct: 229 TLGGSPY 235
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 6e-09
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 42/244 (17%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ T+ + LG G FG Y A D G+ RVAVK + ++ L +E + E +++
Sbjct: 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLN-EASVMK 64
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQMLR 210
H +VV+ + MEL G+L + + + ++ +++M++
Sbjct: 65 GFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123
Query: 211 VAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+AAE +L+ VHRD+ N + D ++K DFG++ +DI
Sbjct: 124 MAAEIADGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMT---------RDIYE 171
Query: 264 SAYY------------VAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 309
+ YY +APE LK SD+WS GV+ + I +P+ + + +
Sbjct: 172 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231
Query: 310 KEVL 313
K V+
Sbjct: 232 KFVM 235
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 8e-09
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 54/256 (21%)
Query: 104 LGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK ++ A +D RE ++L L HE+
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEH 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGEL--------LDRILAKKDSRYTEKDAAVVVRQMLR 210
+VKFY + + + + E + G+L D +L + +R E + QML
Sbjct: 69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE----LTQSQMLH 124
Query: 211 VAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+A + VHRD+ N L E+ +K DFG+S +D+
Sbjct: 125 IAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYS 172
Query: 264 SAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 309
+ YY + PE ++ RK ESDVWS+GV+ + I G++P++ + + +
Sbjct: 173 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 232
Query: 310 KEVLRNKPDFRRKPWP 325
+ + + + R + P
Sbjct: 233 ECITQGRVLQRPRTCP 248
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 14 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV----------R 206
N++ A E Y+Y+A+E G LLD + + SR E D A + +
Sbjct: 68 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQ 124
Query: 207 QMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-- 257
Q+L AA+ +HRD+ N L E+ K DFGLS G++
Sbjct: 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSR----GQEVY 177
Query: 258 FQDIVGS--AYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 313
+ +G ++A E L SDVWS GV+ + I+ G P+ T +++++
Sbjct: 178 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 237
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+ +R + + + D +++ + P R + AQ L
Sbjct: 238 QG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 3e-08
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 261 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319
I+G+ Y+APE+L K GP D W++GV + L G PF D+T +F+ +L
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN----- 594
Query: 320 RRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
R PWP +S +A++ ++ LL DP R + HP
Sbjct: 595 RDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 3e-08
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ TIGK G+FG + + G++VAVK I+ + + E ++
Sbjct: 6 KELKLLQTIGK----GEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMT 54
Query: 152 ALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
L H N+V+ E+ +YI E G L+D + ++ S +++ L
Sbjct: 55 QLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL---GGDCLLKFSLD 110
Query: 211 VA-AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAY 266
V A +L VHRD+ N L ED+ K +DFGL+ K QD
Sbjct: 111 VCEAMEYLEANNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVK 164
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF 300
+ APE L+ K +SDVWS G++ + I GR P+
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDR-----VAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
LG G+FG ++A K + V VK ++K K + +RE+ + + L+ H
Sbjct: 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLS-H 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC- 215
+NVV+ + Y+ +E + G+L + A K K + +Q + + +
Sbjct: 68 KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIA 127
Query: 216 ----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY-- 267
HL VHRD+ N L S +K + LS +D+ S YY
Sbjct: 128 LGMDHLSNARFVHRDLAARNCLVSS---QREVKVSLLSLS---------KDVYNSEYYKL 175
Query: 268 ---------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTED 306
+APE V + +SDVWS GV+ + + G PF+ +++
Sbjct: 176 RNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE 225
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 27/232 (11%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPI 138
PC + +Y I L G G +V T + R V VK + K
Sbjct: 77 PCETTSSSDPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----- 131
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL--CEGGELLDRILAKKDSRY 196
RE+ IL+ ++ H ++ +A+ + V + M C+ +DR
Sbjct: 132 ---TPGREIDILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRS-----GPL 182
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFI 252
+ A + R++L A H G++HRD+K EN +F E++ L DFG L
Sbjct: 183 PLEQAITIQRRLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG--DFGAACKLDAHP 239
Query: 253 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDK 303
+ + G+ +PE+L ++D+WS G++ + + + K
Sbjct: 240 DTPQCY-GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290
|
Length = 392 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 100 IGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+GK LG G+FG AT +A VAVK +++N + D+ E +L+ +
Sbjct: 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVN 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI----------LAKKDSRYTEKDAAVV 204
H +V+K Y A D + + +E + G L + L +R +
Sbjct: 62 -HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120
Query: 205 VR------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252
R Q+ R LVHRD+ N L ++ +K +DFGLS +
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRK---MKISDFGLSRDV 177
Query: 253 KPG----KKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
K+ + + ++A E L +SDVWS GV+ + I+ G P+
Sbjct: 178 YEEDSYVKRSKGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 104 LGHGQFGYT---YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG K ++ KI KN P +++ RE ++Q L + +V
Sbjct: 3 LGSGNFGTVKKGMYKMKK--SEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ E ++++ + MEL E G L ++ L K + TEK+ +V Q+
Sbjct: 60 RMIGICEAESWMLV-MELAELGPL-NKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNF 116
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY----VAPEVLK-R 275
VHRD+ N L + K +DFGLS + + + + APE +
Sbjct: 117 VHRDLAARNVLLVT---QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 276 KSGPESDVWSIGVITYILLC-GRRPF 300
K +SDVWS GV+ + G++P+
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV--KILQALAGHEN 158
KLLG G FG + GD + + P+A++ ++ + Q + H
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKI----------PVAIKTIQDRSGRQTFQEITDHML 61
Query: 159 VVKFYNAFEDDNYVYIAMELCEG------------GELLDRILAKKDSRYTEKDAAVVVR 206
+ D Y+ + +C G G LLD + +DS D ++
Sbjct: 62 AMGSL----DHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSL----DPQRLLN 113
Query: 207 QMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQD 260
+++A + H +VHR++ N L KS DS ++ DFG++D + P K + +
Sbjct: 114 WCVQIAKGMYYLEEHRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDDKKYFYSE 170
Query: 261 IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 300
++A E +L + +SDVWS GV + ++ G P+
Sbjct: 171 HKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 8e-07
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 490 EKFDIDRDGFITPEELR----------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
+ D D DG+I EELR ++ I+ E D D DGRIS EF +
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVAT---------------DKANGDR-VAVKKIEKNKMI 135
+F R + LG GQFG ++ D A+ VAVK + +
Sbjct: 1 EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE----LLDRILAK 191
A ED +EVKIL L+ N+ + D + + ME E G+ L +
Sbjct: 61 --NAREDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAET 117
Query: 192 KDSRYTEK--DAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDF 246
K + ++ ++A+ +L VHRD+ N L + ++K DF
Sbjct: 118 SGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK---NYTIKIADF 174
Query: 247 GLSDFIKPGKKFQDIVGSAYY------VAP-------EVLKRKSGPESDVWSIGVITY-I 292
G+S +++ S YY P VL K +SDVW+ GV + I
Sbjct: 175 GMS---------RNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225
Query: 293 L-LCGRRPF 300
L LC +P+
Sbjct: 226 LTLCREQPY 234
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 386 LKQFALRALASTL---DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 442
+F L ++ L D EE +LR+ F D D +G IS+ E+R+ L K L +L +
Sbjct: 74 FPEF-LTVMSVKLKRGDKEE--ELREAFKLFDKDHDGYISIGELRRVL-KSLGERLSDEE 129
Query: 443 VLEILQAIDCNTDGLVDFSEFVAATLH 469
V ++L+ D + DG +D+ EF
Sbjct: 130 VEKLLKEYDEDGDGEIDYEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 97 RYTIGKLLGHGQFGYTY------VATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVK 148
+ T+ + LG G FG Y V D+ RVA+K + + + E ++ E
Sbjct: 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPE-TRVAIKTVNEAASMR----ERIEFLNEAS 61
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQ 207
+++ H +VV+ + MEL G+L + + + + A +++
Sbjct: 62 VMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKK 120
Query: 208 MLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKP 254
M+++A E + + VHRD+ N + ED ++K DFG++ D+ +
Sbjct: 121 MIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRK 177
Query: 255 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
G K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 178 GGKG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234
Query: 313 ----LRNKPD 318
L +KPD
Sbjct: 235 MEGGLLDKPD 244
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
KLL G Y+ + +K D +REV ILQ LA
Sbjct: 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSR-----EKGADREREVAILQLLARKGLP 54
Query: 160 V-KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
V K + E D + Y+ ME EG L + S ++D A + ++L LH
Sbjct: 55 VPKVLASGESDGWSYLLMEWIEGETL------DEVSEEEKEDIAEQLAELLA-----KLH 103
Query: 219 -----GLVHRDMKPENFLFKSAK 236
L H D+ P N L K
Sbjct: 104 QLPLLVLCHGDLHPGNILVDDGK 126
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 48/231 (20%)
Query: 104 LGHGQFGYTYVA--TDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG Y T VA+K +++N P ++ ++E +++ L H N
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPN 69
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK---KDSRYTEKDAAVV----VRQMLRV 211
+V + + E G+L + ++ D D V L +
Sbjct: 70 IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI 129
Query: 212 AAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
A + +L H VHRD+ N L E ++K +DFGLS +DI +
Sbjct: 130 AIQIAAGMEYLSSHHFVHRDLAARNCL---VGEGLTVKISDFGLS---------RDIYSA 177
Query: 265 AYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
YY + PE +L K ESD+WS GV+ + I G +P++
Sbjct: 178 DYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 5e-06
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V + ++ V++ ++ EGG+L I K E+ +M+ H
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS--KFLNIPEECVKRWAAEMVVALDALHR 103
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G+V RD+ P N L ++ T F ++ + + Y APEV
Sbjct: 104 EGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDSCDGEAV--ENMYCAPEVGGISE 158
Query: 278 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
E+ D WS+G I + LL G + + GI N P++ +S A+ ++
Sbjct: 159 ETEACDWWSLGAILFELLTG-KTLVECHPSGINTHTTLNIPEW-------VSEEARSLLQ 210
Query: 337 KLLVKDPRARLTAAQA-----LSHPW 357
+LL +P RL A A SHP+
Sbjct: 211 QLLQFNPTERLGAGVAGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 7e-06
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y +G+ VA+K + +N P A +++ E ++ A G
Sbjct: 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVM-AGVGSP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
V + V + +L G LLD + KD R +D Q+ + +
Sbjct: 70 YVCRLLGICLTST-VQLVTQLMPYGCLLDYVRENKD-RIGSQDLLNWCVQIAKGMSYLEE 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVL 273
LVHRD+ N L KS + +K TDFGL+ + + G + +L
Sbjct: 128 VRLVHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 184
Query: 274 KRKSGPESDVWSIGVITYILLC-GRRPF 300
R+ +SDVWS GV + L+ G +P+
Sbjct: 185 HRRFTHQSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-05
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 411 DAIDVDKNGSISLEEMRQALAK-DLPWKLKESR--VLEILQAIDCNTDGLVDFSEFVAA 466
+D D +G I +EE+R+ L L +E + ID + DG + F EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 23/236 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 71
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V+ + + +L G LLD + KD+ ++ V Q+ +
Sbjct: 72 VRLLGVCLSPT-IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCV-QIAKGMMYLEERR 129
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 275
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 130 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 186
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSI 327
K +SDVWS GV + L+ F K DGI R PD R P P I
Sbjct: 187 KFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPDLLEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+GK+LG G+FG + +VAVK + K + +E+ E ++
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD- 59
Query: 156 HENVVKFYN-AFEDDNYVYIAMELC-----EGGELLDRILAKKDSRYTEKDAAVVVRQML 209
H NV+K FE + I + + G+L +L SR + ++ +L
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLY---SRLGGLPEKLPLQTLL 116
Query: 210 RVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
+ + L +HRD+ N + +ED ++ DFGLS I G ++
Sbjct: 117 KFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIYSGDYYRQGR 173
Query: 263 GSAY---YVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
+ ++A E L R +SDVW+ GV + I G+ P+
Sbjct: 174 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY 216
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 29/239 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++ VA+K++ + P A +++ E ++ A +
Sbjct: 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + V + + + E
Sbjct: 70 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQIAKGMNYLEE 127
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE 271
L VHRD+ N L K+ + +K TDFGL+ + +K G ++A E
Sbjct: 128 RRL---VHRDLAARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALE 181
Query: 272 -VLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSI 327
+L R +SDVWS GV + L+ G +P+ DGI E+ R P P I
Sbjct: 182 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEISSILEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 5e-05
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 14/170 (8%)
Query: 126 VKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE---GG 182
+ K K I +E+ E+ L L HEN++K + Y+ + +
Sbjct: 196 IAKRVKAGSRAAIQLEN---EILALGRL-NHENILKIEEILRSEANTYMITQKYDFDLYS 251
Query: 183 ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242
+ D KD ++ A++ +Q+L H L+HRD+K EN D +
Sbjct: 252 FMYDEAFDWKDRPLLKQTRAIM-KQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIV 307
Query: 243 ATDFG-LSDFIKPGKKFQ-DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVI 289
DFG F K + F VG+ +PE+L E +D+WS G+I
Sbjct: 308 LGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI 357
|
Length = 501 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 6e-05
Identities = 56/229 (24%), Positives = 86/229 (37%), Gaps = 30/229 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALA- 154
I ++LG G+FG K R VA+ L D +R + +AL
Sbjct: 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIH-------TLRAGCSDKQRRGFLAEALTL 60
Query: 155 ---GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H N+V+ N + I E G LD L K + + A + ML
Sbjct: 61 GQFDHSNIVRLEGVITRGNTMMIVTEYMSNG-ALDSFLRKHEGQLV----AGQLMGMLPG 115
Query: 212 AAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS--A 265
A + G VH+ + L S D K + F K + + G
Sbjct: 116 LASGMKYLSEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPV 172
Query: 266 YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ APE ++ SDVWS G++ + ++ G RP+WD + + K V
Sbjct: 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 7e-05
Identities = 76/327 (23%), Positives = 128/327 (39%), Gaps = 49/327 (14%)
Query: 10 VSGSNSGSNNNNANH--HRNANKEEAKR------RHNHHARNDTTHKHQHQHQERAKNYQ 61
NS NN+A+ + + A+R R + + K +
Sbjct: 26 ALSGNSPKANNSASTGQTTSRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATT 85
Query: 62 QLKTKQHQKTNSRRQ--TGVIPCGKRTD------FGYDKDFD-RRYTIGKLLGHGQFGYT 112
T +++ T +P R + G D D +R+ I LLG G FG
Sbjct: 86 TPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKV 145
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-----AGHENVVKFYNAFE 167
A D+ + AVK I +N +P D K E++ ++ + A ++K F+
Sbjct: 146 VEAWDRKRKEYCAVK-IVRN---VPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201
Query: 168 DDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRD 224
++ ++ I M G LLD I+ K ++ + A ++ Q H LH L+H D
Sbjct: 202 NETGHMCIVMPK-YGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTD 257
Query: 225 MKPENFLFKSAK-------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
+KPEN L +++ + ++ D G IV + +Y +PE
Sbjct: 258 LKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG--GCCDERHSRTAIVSTRHYRSPE 315
Query: 272 V-LKRKSGPESDVWSIGVITYILLCGR 297
V L +D+WS+G I Y L G+
Sbjct: 316 VVLGLGWMYSTDMWSMGCIIYELYTGK 342
|
Length = 467 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 258
V RQ+L H G++HRD+K EN + + ED L DFG + F +
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319
Query: 259 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 291
I G+ APEVL P D+WS G++ +
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 200 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
D + R +LR H + ++HRD+K EN +F + D L DFG + F P
Sbjct: 183 DILAIERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----V 233
Query: 260 DIVGSAYY--------VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
DI + YY APE+L R GP D+WS G++ + + ++K DG+
Sbjct: 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK--DGL 289
|
Length = 391 |
| >gnl|CDD|204523 pfam10591, SPARC_Ca_bdg, Secreted protein acidic and rich in cysteine Ca binding region | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 467 TLHVHQLEEHDSEK-WHLRSQAAFEKF---DIDRDGFITPEELR-MHTGLKGS---IDPL 518
H +L + D +K + + F D + DG+++ EL + L I P
Sbjct: 33 VDHYSELLKRDEQKNYPMCKDPLGWMFNQLDTNHDGYLSRSELAPLRAPLVPMEHCIKPF 92
Query: 519 LEEADIDKDGRISLSEFRR 537
+ D DKDG ISL E+ +
Sbjct: 93 FKSCDADKDGLISLREWCK 111
|
The SPARC_Ca_bdg domain of Secreted Protein Acidic and Rich in Cysteine is responsible for the anti-spreading activity of human urothelial cells. It is rich in alpha-helices. This extracellular calcium-binding domain contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2. Length = 112 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 100 IGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
GK LG G FG AT + N RVAVK ++ + E + E+KIL L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLG 99
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186
H+N+V A V + E C G+LL+
Sbjct: 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLN 131
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|238155 cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 457 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 514
D E H +L++ F + D + DG ++ EL +
Sbjct: 22 HEDLKERDELEKHKLRLKKSLYPMCKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHC 81
Query: 515 IDPLLEEADIDKDGRISLSE 534
I P E D+DKDG ISL E
Sbjct: 82 IKPFFESCDLDKDGSISLDE 101
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. Length = 116 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA 139
+P R +F D +G++LG G FG T V K+ KM+ P A
Sbjct: 26 LPYDSRWEFPRD-----GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAV-KMLKPTA 79
Query: 140 VEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-- 193
K+ E+KI+ L H N+V A +YI E C G+L++ + +D
Sbjct: 80 RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNF 139
Query: 194 -SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL---FKSAKEDSSLKATD---F 246
SR+ EK + + G+ D +++ F++ + +K D +
Sbjct: 140 LSRHPEKP-----------KKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188
Query: 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDV 283
IK K+ DI S Y K +S+V
Sbjct: 189 VPMLEIKEASKYSDIQRSNYDRPAS---YKGSNDSEV 222
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 3e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 497 DGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
G IT EEL+ G+ S +D L E D D DG+IS EF LL+
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQ 51
|
Length = 53 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 38/216 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV----------EDVKREVKILQAL 153
LG G FG + V K+ K ++ + I V +++ RE +I+ L
Sbjct: 3 LGSGNFGCV----------KKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL 52
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
+ +V+ E + + + ME+ GG L + KKD VV M +V+
Sbjct: 53 D-NPYIVRMIGVCEAEA-LMLVMEMASGGPLNKFLSGKKDEITVSN----VVELMHQVSM 106
Query: 214 EC-HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY--- 267
+L G VHRD+ N L + K +DFGLS + + + +
Sbjct: 107 GMKYLEGKNFVHRDLAARNVLLVNQH---YAKISDFGLSKALGADDSYYKARSAGKWPLK 163
Query: 268 -VAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 300
APE + RK SDVWS G+ + G++P+
Sbjct: 164 WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.3 bits (88), Expect = 4e-04
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 486 QAAFEKFDIDRDGFITPEELR 506
+ F +FD + DG I+ EEL+
Sbjct: 2 KDLFRQFDTNGDGKISKEELK 22
|
Length = 25 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 35/238 (14%)
Query: 102 KLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQALAGHE 157
K +G+G FG + +V VK++ + + E +K E + ++L H
Sbjct: 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ----EQMKFLEEAQPYRSLQ-HS 55
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA---E 214
N+++ + + ME C G+L + + + + D + R +A
Sbjct: 56 NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLH 115
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-------FIKPGKKFQDIVGSAYY 267
H + +H D+ N L + D ++K D+GLS ++ P + + + +
Sbjct: 116 LHKNNFIHSDLALRNCLLTA---DLTVKIGDYGLSHNKYKEDYYVTPDQLWVPL----RW 168
Query: 268 VAPEVLKRKSG--------PESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNK 316
+APE++ G ES+VWS+GV + L G +P+ +++ + +R +
Sbjct: 169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ 226
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 6e-04
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
V R + A H HG V D+ +FL + + + F ++ G VG
Sbjct: 122 VARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA---NGTLHLCPVG 178
Query: 264 SAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 300
+ + PE+ S D + + V+ + +L GR P+
Sbjct: 179 VSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY 222
|
Length = 637 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 6e-04
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAK 432
+LR+ F D D +G IS EE+R+AL
Sbjct: 1 ELREAFKLFDKDGDGYISAEELRKALRS 28
|
Length = 30 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 98 YTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+T+G++LG G+FG A ++ + +VAVK + K + +E+ RE ++
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEF- 58
Query: 155 GHENVVKFYNAF---EDDNYVYIAM---ELCEGGELLDRILAKKDSRYTEKDAAV----V 204
H NV+K + I M + G+L +L SR E+ + +
Sbjct: 59 DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLM---SRIGEEPFTLPLQTL 115
Query: 205 VRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
VR M+ +A+ +HRD+ N + E+ ++ DFGLS I G ++
Sbjct: 116 VRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADFGLSKKIYSGDYYRQ- 171
Query: 262 VGSAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 300
G A + + L +S SDVW+ GV + I+ G+ P+
Sbjct: 172 -GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPY 216
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 36.1 bits (85), Expect = 0.001
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQAL 430
L+D F D + +G IS EE+++ L
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKRLL 25
|
Length = 25 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 26/106 (24%)
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE--------- 271
VHRD+ N L E+ +K DFGLS ++I + YY A E
Sbjct: 152 VHRDLATRNCL---VGENMVVKIADFGLS---------RNIYSADYYKASENDAIPIRWM 199
Query: 272 ----VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ + ESDVW+ GV+ + I G +P++ + + V
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV 245
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.9 bits (84), Expect = 0.001
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAK 432
+L++ F D D +G IS EE ++ L K
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.002
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 380 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 430
++ L++ D+E + F+ ID D +G IS EE +A+
Sbjct: 10 YIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 18/198 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
++ G+ G +Y NG + VK+I I + D+ + LQ H N+VK
Sbjct: 697 VISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGK----LQ----HPNIVKL 748
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ Y+ E EG L +L K A + + + + C +V
Sbjct: 749 IGLCRSEKGAYLIHEYIEGKN-LSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-S 281
++ PE + K++ L+ + GL K F S+ YVAPE + K E S
Sbjct: 808 -NLSPEKIII-DGKDEPHLRLSLPGL--LCTDTKCFI----SSAYVAPETRETKDITEKS 859
Query: 282 DVWSIGVITYILLCGRRP 299
D++ G+I LL G+ P
Sbjct: 860 DIYGFGLILIELLTGKSP 877
|
Length = 968 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 158 NVVKFYNAFEDDNYVYIA-------------MELCEGGELLDRILAKKDSRYTEKDAAVV 204
N +F F+DD VY+ ME +G ++ D K ++ A ++
Sbjct: 214 NAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELL 273
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
VR Q+LR G H D P N L + D + DFG+ + P KF+
Sbjct: 274 VRAFLRQLLR-------DGFFHADPHPGNIL---VRSDGRIVLLDFGIVGRLDP--KFRR 321
Query: 261 IVGSAYY 267
+
Sbjct: 322 YLAELLL 328
|
Length = 517 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
V+RQ+L + H G+VHRD+KPEN L D +K DFG + + G F + G
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYG 370
Query: 264 --SAYYVAPEVL 273
Y PE L
Sbjct: 371 MLDPRYSPPEEL 382
|
Length = 507 |
| >gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 42/185 (22%)
Query: 89 GYD----KDFDRR---YTIGKLLGHGQFGYTYVATDKANGDRVAVK----------KIEK 131
GYD +R IG +G G+ YVA D G +VAVK K+++
Sbjct: 77 GYDALALHALVKRGIVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKR 135
Query: 132 NKMILP---------IAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAMELCEG 181
N+ L ++ +RE + LQ L V K N + ME EG
Sbjct: 136 NRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPI----AWNRHAVVMEYIEG 191
Query: 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241
EL R ++ ++ ++L + + G+VH D+ N L ED +
Sbjct: 192 VEL-------YRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNIL---VTEDGDI 241
Query: 242 KATDF 246
D+
Sbjct: 242 VVIDW 246
|
Length = 304 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 35.4 bits (83), Expect = 0.002
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 486 QAAFEKFDIDRDGFITPEELRM 507
+ AF FD D DG I EE +
Sbjct: 3 KEAFRLFDKDGDGKIDFEEFKD 24
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.002
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 408 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA 466
F ++D D +G IS +E R L K L S VL I D + DG +D EF A
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGK---SGLPRS-VLAQIWDLADTDKDGKLDKEEFAIA 58
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVAT----DKANG-DRVAVKKIEKNKMILPIAVED--VK 144
+F R R +GK+LGHG FG A+ DK + + VAVK +++ A E +
Sbjct: 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT----ASEHKALM 58
Query: 145 REVKILQALAGHENVVKFYNAFEDDN-YVYIAMELCEGGELLDRILAKKD--SRYTEK 199
E+KIL + H NVV A N + + +E C+ G L + + AK++ S Y EK
Sbjct: 59 SELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREK 116
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 35.7 bits (83), Expect = 0.004
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 489 FEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
F D D DG I+ +E R +GL + + + + AD DKDG++ EF
Sbjct: 5 FRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEF 55
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.93 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.91 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.9 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.89 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.89 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.87 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.84 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.84 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.81 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.79 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.78 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.78 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.75 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.75 | |
| PTZ00183 | 158 | centrin; Provisional | 99.75 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.74 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.7 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.69 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.66 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.64 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.64 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.63 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.63 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.62 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.52 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.48 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.45 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.44 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.43 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.43 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.41 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.36 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.34 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.34 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.33 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.33 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.33 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.3 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.16 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.14 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.14 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.13 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.12 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.09 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.07 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.0 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.0 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.98 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.97 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 98.94 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 98.94 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.94 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 98.93 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.9 | |
| PTZ00183 | 158 | centrin; Provisional | 98.84 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.83 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.83 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 98.81 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.81 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.8 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.78 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.77 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.77 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.77 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.77 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.73 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.72 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.71 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.7 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.68 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.68 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.66 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.65 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.65 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.64 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.63 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.58 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.57 | |
| KOG2643 | 489 | consensus Ca2+ binding protein, contains EF-hand m | 98.57 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-62 Score=467.30 Aligned_cols=273 Identities=36% Similarity=0.629 Sum_probs=246.7
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc----hhhHHHHHHHHHHHHHccCCCCcceEE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL----PIAVEDVKREVKILQALAGHENVVKFY 163 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~l~ 163 (562)
....+.+...|.+.+.||+|+||.|-+|..+.||+.||||++.+..... ......+.+|+++|++| +|||||+++
T Consensus 164 ~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~ 242 (475)
T KOG0615|consen 164 KVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIK 242 (475)
T ss_pred cCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEe
Confidence 3445667889999999999999999999999999999999998765543 11234467999999999 599999999
Q ss_pred EEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
++|......||||||++||+|++.+..+ +.+.+...+.+++||+.||.|||++||+||||||+||||....++..+||
T Consensus 243 d~f~~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKI 320 (475)
T KOG0615|consen 243 DFFEVPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKI 320 (475)
T ss_pred eeeecCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEe
Confidence 9999999999999999999999999655 57888999999999999999999999999999999999997667789999
Q ss_pred eeccCccccCCCCCcccccCCCcccCchhcccCC----CCCcchHHHHHHHHHHHhCCCCCCCCChhh-HHHHHHhCCCC
Q 008547 244 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPD 318 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 318 (562)
+|||+|++......+.+.||||.|.|||++.... ..++|+||+||+||-+++|.+||.+..... ..+++.++...
T Consensus 321 tDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~ 400 (475)
T KOG0615|consen 321 TDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA 400 (475)
T ss_pred cccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc
Confidence 9999999998888889999999999999986542 458999999999999999999998876665 89999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+-++.|..+++++.+||..||..||++|||+.++|+||||+....
T Consensus 401 f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 401 FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 999999999999999999999999999999999999999997654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=450.44 Aligned_cols=257 Identities=36% Similarity=0.640 Sum_probs=240.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|..++.||+|||+.||.+++..+|+.||+|++.+.....+...+.+.+||+|.+.|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 57999999999999999999999999999999999988888889999999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+|+|+.++|..++. ..+.+++.+++.+++||+.||.|||+++|||||||..|++|+ ++.+|||+|||||..+...
T Consensus 97 LELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~---~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 97 LELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN---ENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec---CcCcEEecccceeeeecCc
Confidence 99999999998874 557899999999999999999999999999999999999998 6889999999999988754
Q ss_pred -CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
....+.||||.|.|||++.. +.+..+||||+||+||-|++|++||...+..+++..|......++. .++.++++
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~d 247 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKD 247 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHH
Confidence 67789999999999999875 4599999999999999999999999999999999999988776654 68999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
||.+||..||.+|||++++|.|+||+...
T Consensus 248 LI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 248 LIRKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred HHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 99999999999999999999999996544
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-56 Score=425.15 Aligned_cols=257 Identities=31% Similarity=0.594 Sum_probs=235.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+++.+.|++.+|+|++.+.........+...+|..||..+ +||+||+++..|++.+.+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 4799999999999999999999999999999999988877777889999999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc-cCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~-~~~ 254 (562)
+||+.||+|+.+| ++.+.+++..++.++.+|+.||.|||++|||||||||+||||+ .+|+|+|+|||+|+. ...
T Consensus 104 ld~~~GGeLf~hL--~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHL--QREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHH--HhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCcEEEeccccchhcccC
Confidence 9999999999988 5568899999999999999999999999999999999999999 699999999999984 455
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
+....++|||+.|||||++.+ +++.++|+||||+++|+|++|.+||.+.+...+++++..+...... ..++.++++
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ard 255 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARD 255 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHH
Confidence 566778899999999998765 6799999999999999999999999999999999999988733322 237899999
Q ss_pred HHHHcCccCccCCC----CHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARL----TAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rp----s~~~~l~hp~f~~~ 361 (562)
||+++|..||++|. ++.++-+||||+..
T Consensus 256 ll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 256 LLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 99999999999996 78899999999874
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-58 Score=408.42 Aligned_cols=300 Identities=31% Similarity=0.638 Sum_probs=269.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.|.+.|.+.+.||+|.|+.||++.+..||+.+|+|++....... ...+.+.+|++|-+.|+ |||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 35678999999999999999999999999999999987665533 36788999999999996 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||+|++.|++|...+... ..+++..+-.+++||++||.|||.+||||||+||.|+||-+.....-|||+|||+|..+
T Consensus 86 ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999999998877655 46899999999999999999999999999999999999988666778999999999988
Q ss_pred CCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
..+......+|||.|||||++.. .++..+|||+.|+|||-|+.|++||++.+...+++.|.++...++.+.|+++++++
T Consensus 164 ~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~A 243 (355)
T KOG0033|consen 164 NDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEA 243 (355)
T ss_pred CCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHH
Confidence 86666778899999999999875 56999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhcc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 396 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~ 396 (562)
++|+++||..||.+|+|+.++|+|||+.+...-....-.......|++|+...+++..++.++..
T Consensus 244 k~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~s 308 (355)
T KOG0033|consen 244 KSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVIA 308 (355)
T ss_pred HHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998654333333445678899999999999887776543
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-54 Score=433.72 Aligned_cols=323 Identities=53% Similarity=0.907 Sum_probs=289.3
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
....+...|.+.+.||+|.||.||++.++.||+.+|+|++.+.........+.+.+|+.+|++|.+|||||.++++|++.
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 44556778999999999999999999999999999999998887665556788999999999997799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC-CCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-DSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~-~~~vkl~DfG~ 248 (562)
..+++|||+|.||+|++.+... .+++..+..++.|++.|+.|||+.||+||||||+|+|+....+ ++.+|++|||+
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 9999999999999999999766 3999999999999999999999999999999999999987543 46899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
|.....+......+||+.|+|||++. ..++..+||||+|+++|.|++|.+||++.+......++..+...|..+.|+.+
T Consensus 186 a~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~i 265 (382)
T KOG0032|consen 186 AKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDI 265 (382)
T ss_pred ceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcccc
Confidence 99988877788999999999999998 57899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhccccchHHhhhhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLR 407 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 407 (562)
+..+++||+.||..||.+|+|+.++|+|||++.......++.....+..++++....+++...........+ +..++
T Consensus 266 s~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 342 (382)
T KOG0032|consen 266 SESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLK 342 (382)
T ss_pred CHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHH
Confidence 999999999999999999999999999999998776676677777777777777766766665444444444 77788
Q ss_pred cccccccCCCC
Q 008547 408 DQFDAIDVDKN 418 (562)
Q Consensus 408 ~~F~~~D~~~~ 418 (562)
..|..+|.+++
T Consensus 343 ~~~~~~~~~~~ 353 (382)
T KOG0032|consen 343 EMFKLMDTDNN 353 (382)
T ss_pred HHHHhhccccc
Confidence 88888888776
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-55 Score=401.23 Aligned_cols=254 Identities=31% Similarity=0.591 Sum_probs=236.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++++.||.|+||.|-+++++.+|..+|+|++++.....-...+...+|..+|+.+. ||+++++++.|.+.+.+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEE
Confidence 36899999999999999999999999999999999988777778899999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||.|++++ ++.+++++..++.++.||+.||+|||+++|++|||||+||||+ .+|++||+|||+|+.+..
T Consensus 123 meyv~GGElFS~L--rk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYL--RKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred EeccCCccHHHHH--HhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCcEEEEeccceEEecC-
Confidence 9999999999998 5568899999999999999999999999999999999999999 589999999999998754
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.+.+.||||.|+|||++.. +++.++|+|||||++|||+.|.+||.+.+...++++|+.+...|+. .+++++++|
T Consensus 197 -rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdL 271 (355)
T KOG0616|consen 197 -RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDL 271 (355)
T ss_pred -cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHH
Confidence 3678999999999998865 5688999999999999999999999999999999999999988774 588999999
Q ss_pred HHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|+.+|+.|-.+|. ...++..||||+..
T Consensus 272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred HHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 9999999999994 67899999999974
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=428.73 Aligned_cols=258 Identities=37% Similarity=0.669 Sum_probs=237.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+++.||.|+|++|++|+++.+++.||||++.+...........+.+|-.+|.+|.+||.|++|+-.|+++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 47999999999999999999999999999999999887777777788899999999998899999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++|+|++++ ++.+.+++..++.++.+|+.||+|||++|||||||||+||||+ +++++||+|||.|+.+.+.
T Consensus 153 Le~A~nGdll~~i--~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd---~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 153 LEYAPNGDLLDLI--KKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD---KDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEecCCCcHHHHH--HHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc---CCCcEEEeeccccccCChh
Confidence 9999999999999 5558899999999999999999999999999999999999999 6899999999999876432
Q ss_pred CC------------c--ccccCCCcccCchhcccCC-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 256 KK------------F--QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 256 ~~------------~--~~~~gt~~y~aPE~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
.. . ..++||..|.+||++.... ++.+|||+||||||+|+.|.+||.+.++.-++++|+.-...|+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp 307 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP 307 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence 21 1 4589999999999998765 8999999999999999999999999999999999998777666
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+.+++.+.+||+++|..||.+|+++.+|.+||||....
T Consensus 308 ----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 308 ----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ----CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 46889999999999999999999999999999998753
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=406.77 Aligned_cols=256 Identities=30% Similarity=0.439 Sum_probs=223.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-eEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-~~~lv 175 (562)
+.+.++.||+|+.|+||+++|+.|++.+|+|++... ..+...+++.+|+++++.. +||+||.+|+.|..++ .++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 566788999999999999999999999999999433 3566788999999999999 6999999999999988 59999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||.+|+|...+.. .+.+++.....++.+++.||.|||. ++||||||||+|||+++ .|.|||||||.|..+..
T Consensus 157 mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KGEVKICDFGVSGILVN 231 (364)
T ss_pred hhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CCCEEeccccccHHhhh
Confidence 999999999998843 3789999999999999999999995 99999999999999994 89999999999987765
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCC-----ChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-----TEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
+ ...+++||..|||||.+.+ .|+.++||||||+.++|+++|+.||... ...+++..|..+.+.-.+ -..+|
T Consensus 232 S-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP--~~~fS 308 (364)
T KOG0581|consen 232 S-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLP--EGEFS 308 (364)
T ss_pred h-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCC--cccCC
Confidence 5 5578899999999999887 5799999999999999999999999774 445566666654332111 11489
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+++++||..||.+||.+||++.++++|||++....
T Consensus 309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 309 PEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 99999999999999999999999999999997654
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-53 Score=422.52 Aligned_cols=260 Identities=32% Similarity=0.570 Sum_probs=234.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||.||+|+.+.||..+|+|++.+..+......+.++.|-++|... ++|+||+||..|++..++|||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEE
Confidence 5799999999999999999999999999999999999888888899999999999985 799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|||++||++...|. +.+.|++..++.++.+++.|++.||+.|+|||||||+|+||+ ..||+||+|||||.-+..
T Consensus 220 MEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCCEeeccccccchhhhh
Confidence 99999999999884 447899999999999999999999999999999999999999 689999999999843210
Q ss_pred ---------------------C--C-----C-------------------cccccCCCcccCchhccc-CCCCCcchHHH
Q 008547 255 ---------------------G--K-----K-------------------FQDIVGSAYYVAPEVLKR-KSGPESDVWSI 286 (562)
Q Consensus 255 ---------------------~--~-----~-------------------~~~~~gt~~y~aPE~~~~-~~~~~~Diwsl 286 (562)
. . . ....+|||.|+|||++.+ +++..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0 0 0 012589999999999876 46999999999
Q ss_pred HHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCC---CHHHHhcCccccccC
Q 008547 287 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREGG 362 (562)
Q Consensus 287 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rp---s~~~~l~hp~f~~~~ 362 (562)
|||+||||.|.+||.+.+..++++++......+..+.-..+++++++||.+||+ ||++|. +++||.+||||+...
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 999999999999999999999999999888666666556788999999999999 999998 599999999999753
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-53 Score=406.59 Aligned_cols=262 Identities=31% Similarity=0.599 Sum_probs=234.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||+||+|+++.++..||||.+.+... .+...+.+..|+.+|+.|. |||||.+++++..++.+|+|
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999988764 4567888999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC---CCeEEeeccCcccc
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED---SSLKATDFGLSDFI 252 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~---~~vkl~DfG~a~~~ 252 (562)
||||.||+|..++.. .+.+++..++.++.||+.||++||+++||||||||.||||.....+ ..+||+|||+|+..
T Consensus 88 MEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999954 3689999999999999999999999999999999999999864222 67999999999999
Q ss_pred CCCCCcccccCCCcccCchhc-ccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.++....+.||+|.|||||++ ..+|+-|+|+||+|+|||+|++|++||...+..+++..+.++....+.. ...+++.+
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~-~~~~s~~~ 244 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVL-PAELSNPL 244 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCch-hhhccCch
Confidence 988888899999999999998 6788999999999999999999999999999998888776655433322 23466778
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+|+...|..+|.+|.+..+-+.|+++....
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 8999999999999999999999999998654
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-53 Score=425.07 Aligned_cols=259 Identities=33% Similarity=0.617 Sum_probs=239.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+-|++++.||.|+-|.|-+|++..||+.+|||++.+...........+.+||-||+.| .||||+.+|+++.+..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEE
Confidence 4589999999999999999999999999999999887555555677899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
.||++||.|++++..+ +++++.+++++++||+.|+.|||..+|+||||||+|+||+. .+.+||+|||+|....++
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~---~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV---KNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc---ccCEeeeccceeecccCC
Confidence 9999999999999654 78999999999999999999999999999999999999994 556999999999988888
Q ss_pred CCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.-..+.||+|.|.|||++.|.. +.++||||+|||||.|++|+.||.+.+...++.++.++....+ .++|.++++
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQd 241 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQD 241 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHH
Confidence 8889999999999999998854 8999999999999999999999999999999999999876655 479999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
||++||.+||++|+|.++|++|||+..+...
T Consensus 242 LLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 242 LLRRMLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred HHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence 9999999999999999999999999986543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-53 Score=388.53 Aligned_cols=258 Identities=29% Similarity=0.526 Sum_probs=222.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|+.+.++|+|+||.||+|+++.||+.||||++.-. ..++...+-.++|+++|++|+ |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 3688889999999999999999999999999998543 334556677889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-C
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~ 254 (562)
+|||+. ++++.+-... ..++...++.+++|++.|+.|||++++|||||||+||||. .++.+||||||+|+.+. +
T Consensus 80 FE~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eeecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCC
Confidence 999976 6666664443 4689999999999999999999999999999999999999 58999999999999887 7
Q ss_pred CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh--------------CCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------NKPD 318 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--------------~~~~ 318 (562)
+..++.++.|.||+|||.+-+ +|++.+||||+||++.||++|.+.|++.+.-+.+..|.. ..+-
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 888899999999999998866 679999999999999999999999999887665544432 1111
Q ss_pred CC-------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 319 FR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 319 ~~-------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
|. ...+|.++..+.+|++.||..||.+|++.+++|.||||..
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 11 1124567888999999999999999999999999999954
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=416.08 Aligned_cols=259 Identities=38% Similarity=0.717 Sum_probs=232.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.|.+++.||.|+||+|+.|.+..+|..||+|++.+..... ....+.+.+|+.+++.+..||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3468999999999999999999999999999999877653221 13456677999999999669999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC-CCeEEeeccCcc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-SSLKATDFGLSD 250 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~-~~vkl~DfG~a~ 250 (562)
+|+||||+.||+|++++.. .+++.+..++.+++||++|++|||++||+||||||+|||++. + +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~---~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG---NEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC---CCCCEEEecccccc
Confidence 9999999999999999965 578999999999999999999999999999999999999994 4 899999999999
Q ss_pred cc-CCCCCcccccCCCcccCchhcccC--C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 251 FI-KPGKKFQDIVGSAYYVAPEVLKRK--S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 251 ~~-~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
.. .......+.|||+.|+|||++.+. | +.++||||+||+||.|++|+.||.+.+...++..+..+...++. .
T Consensus 170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----~ 245 (370)
T KOG0583|consen 170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----Y 245 (370)
T ss_pred ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC----C
Confidence 87 466677899999999999999874 4 68899999999999999999999999999999998887765553 3
Q ss_pred C-CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 327 I-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 327 ~-~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+ ++++++|+.+||..||.+|+++.+++.||||+..
T Consensus 246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 246 LLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred cCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 4 9999999999999999999999999999999973
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-53 Score=384.09 Aligned_cols=266 Identities=32% Similarity=0.618 Sum_probs=242.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc-----CchhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-----ILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
+.+-..|.-.+.||.|..+.|.++.++.+|+.+|+|++..... ......+.-.+|+.||+++.+||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3444567888899999999999999999999999999853221 12234566778999999999999999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+.+..+++|+|+|+.|.|++++.. .-.+|+...+.|++|+++|++|||.++|+||||||+|||++ ++.++||+||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld---dn~~i~isDF 167 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD---DNMNIKISDF 167 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec---cccceEEecc
Confidence 999999999999999999999943 35799999999999999999999999999999999999999 6889999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcc-------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|+|+.+.++......||||+|.|||.+. .+|+..+|+||+|+|+|-|+.|.+|||.....-+++.+..+...|
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF 247 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF 247 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999874 246888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+.|.+++...++||.+||+.||.+|+|++++|.||||....
T Consensus 248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 9999999999999999999999999999999999999997643
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-52 Score=409.28 Aligned_cols=263 Identities=32% Similarity=0.518 Sum_probs=227.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-eE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YV 172 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-~~ 172 (562)
+..+|.++++||.|+||.||+|+.+.+|..||||.+++.-.. ...-.-+||+..|++|..|||||+|.+++.+.. .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 456899999999999999999999999999999998765432 222334689999999955999999999999887 99
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|||||+ .+|++.+..+ ...+++..++.|+.||+.||+|+|.+|+.||||||+|||+. .+..|||+|||+|+.+
T Consensus 86 ~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 86 YFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREV 160 (538)
T ss_pred eeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEeccccccccc
Confidence 99999995 5999887655 78899999999999999999999999999999999999998 3788999999999999
Q ss_pred CCCCCcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC------------
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------------ 318 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~------------ 318 (562)
.+...++.++.|.||+|||++. +-|+.+.||||+|||++|+++-++.|.+.++.+.+.+|..-...
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 9988899999999999999875 35689999999999999999999999999988777766431111
Q ss_pred -----CCCC---------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 319 -----FRRK---------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 319 -----~~~~---------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
|..+ ..++.+.++.++|.+||.|||.+||||.++|+||||+....
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 1111 13457889999999999999999999999999999997643
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-51 Score=416.85 Aligned_cols=256 Identities=26% Similarity=0.495 Sum_probs=236.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.++++||+|+||+|+++..+.+++.+|||++++.........+..+.|.+|+....+||+++.++..|++.+++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 47999999999999999999999999999999999988888888999999999999987899999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-C
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~ 254 (562)
|||+.||++... .+...+++..++.|+..++.||.|||++||||||||.+||||| ..|++||+|||+++... .
T Consensus 448 mey~~Ggdm~~~---~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 448 MEYVAGGDLMHH---IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEecCCCcEEEE---EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCcEEecccccccccCCC
Confidence 999999994332 3457899999999999999999999999999999999999999 58999999999998754 5
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
+..+.++||||.|||||++.+ .|+.++|+|||||+||||+.|..||.+.++++++..|+...+.++. .+|.++.+
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~ 597 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIA 597 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHH
Confidence 667789999999999999976 5799999999999999999999999999999999999998876664 58999999
Q ss_pred HHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+|+++|..+|++|.. +.+|..||||+..
T Consensus 598 il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 999999999999995 5889999999975
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-51 Score=390.26 Aligned_cols=261 Identities=31% Similarity=0.562 Sum_probs=237.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|++++.||+|.-|+||++..+.++..+|+|++++...........+..|-+||+.+ +||+++.||..|+.+...|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 3689999999999999999999999999999999998877677778888999999999 699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC--
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-- 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-- 253 (562)
||||+||+|...+..+.+..+++..++.++.+++.||+|||..|||+|||||+||||. ++|+|.|+||.|+....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr---edGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR---EDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe---cCCcEEeeeccccccCCCC
Confidence 9999999999998888889999999999999999999999999999999999999998 69999999999873210
Q ss_pred --------------------------------CCC-----------------------CcccccCCCcccCchhcccCC-
Q 008547 254 --------------------------------PGK-----------------------KFQDIVGSAYYVAPEVLKRKS- 277 (562)
Q Consensus 254 --------------------------------~~~-----------------------~~~~~~gt~~y~aPE~~~~~~- 277 (562)
... ....++||-.|.|||++.|..
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 012358999999999998864
Q ss_pred CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC----HHHHh
Q 008547 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQAL 353 (562)
Q Consensus 278 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps----~~~~l 353 (562)
+.++|||+|||+||||++|.+||.+.+..+++.+++...+.|+..+ .++..+++||+++|.+||.+|.. |.+|.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 9999999999999999999999999999999999999998887764 78899999999999999999998 99999
Q ss_pred cCccccccC
Q 008547 354 SHPWVREGG 362 (562)
Q Consensus 354 ~hp~f~~~~ 362 (562)
+||||+...
T Consensus 391 ~HpFF~gVn 399 (459)
T KOG0610|consen 391 RHPFFEGVN 399 (459)
T ss_pred cCccccCCC
Confidence 999999853
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-50 Score=368.00 Aligned_cols=260 Identities=31% Similarity=0.492 Sum_probs=225.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|...+.||+|.||.||+|++..||+.||||++....... .......+||..|+.+. ||||+.++++|...+.+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 47889999999999999999999999999999998764432 23456779999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||++. +|...+ +.+...++..+++.++.+++.||+|||++.|+||||||+|+||+ .++.+||+|||+|+.+.+.
T Consensus 80 fEfm~t-dLe~vI-kd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 80 FEFMPT-DLEVVI-KDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSP 154 (318)
T ss_pred EEeccc-cHHHHh-cccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCC
Confidence 999975 776655 45567899999999999999999999999999999999999999 5899999999999987654
Q ss_pred CC-cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC------
Q 008547 256 KK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS------ 326 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------ 326 (562)
.. ....+-|.+|+|||.+.| .|+..+||||.|||+.||+.|.+.|.+.++-+.+..+++.-.......||+
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 43 334488999999999876 578999999999999999999999999999888888877554444444543
Q ss_pred ------------------CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 ------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 ------------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++++.+|+.+||..||.+|+++.|+|+|+||+...
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 456789999999999999999999999999999754
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=396.19 Aligned_cols=262 Identities=28% Similarity=0.469 Sum_probs=226.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--Ce
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~ 171 (562)
....|+.+++||+|+||.||+|++..||+.||+|++...... +....-..+||.||++| +||||++|.+...+. +.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence 345799999999999999999999999999999999776532 33455677999999999 699999999988765 78
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|||+|||+. +|.-++ ....-.+++.+++.+++||+.||+|||.+||+|||||.+||||+ .+|.+||+|||||++
T Consensus 193 iYlVFeYMdh-DL~GLl-~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid---n~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLL-SSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID---NNGVLKIADFGLARF 267 (560)
T ss_pred EEEEEecccc-hhhhhh-cCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc---CCCCEEeccccceee
Confidence 9999999976 776655 34456899999999999999999999999999999999999999 589999999999997
Q ss_pred cCCCC--CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC--
Q 008547 252 IKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP-- 325 (562)
Q Consensus 252 ~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 325 (562)
..... .++..+-|.||+|||.+.| .|+.++|+||+||||.||+.|++.|.+.++.+.+..|.+.........|+
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 76544 4677889999999999876 57999999999999999999999999999999999887755444443343
Q ss_pred -----------------------CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 326 -----------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 326 -----------------------~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++..+.+|+..||+.||.+|.||.++|+|+||+...
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 2577889999999999999999999999999996543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-52 Score=376.97 Aligned_cols=247 Identities=30% Similarity=0.550 Sum_probs=216.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEE-EEEcCCe-EE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNY-VY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~-~~~~~~~-~~ 173 (562)
..|+|.+.||+|+||+||++.+..+|..||.|.+.-.. ......+.+..|+.+|++| +|||||++++ .|..++. ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhH
Confidence 46999999999999999999999999999999998443 4566788999999999999 5999999998 5555555 89
Q ss_pred EEEeccCCCChHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHH--cC--ceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 174 IAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHL--HG--LVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~lH~--~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
||||||.+|+|...+. .+..+.+++..++.++.|+|.||..+|. .. |+||||||.||+|+ .+|.|||+|||
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGDfG 173 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVKLGDFG 173 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---CCCceeeccch
Confidence 9999999999998774 3445679999999999999999999998 44 99999999999999 58999999999
Q ss_pred CccccCCCCCc-ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 248 LSDFIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 248 ~a~~~~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
+++++...... .+++|||.||+||.+.+ +++.+|||||+||++|||+.-.+||.+.+-.++..+|.++. +++-+-.
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd--~~~~p~~ 251 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGD--YPPLPDE 251 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCC--CCCCcHH
Confidence 99998765543 57899999999998865 67999999999999999999999999999999999998874 2222223
Q ss_pred CCCHHHHHHHHHcCccCccCCCCH
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTA 349 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~ 349 (562)
..|..+..||..|+..||+.||+.
T Consensus 252 ~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 252 HYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HhhhHHHHHHHHHccCCcccCCCc
Confidence 578899999999999999999986
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-51 Score=364.06 Aligned_cols=257 Identities=32% Similarity=0.621 Sum_probs=237.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|.||.||+|+.+.++-.||+|++.++.........++.+|++|-..|+ ||||+++|++|.+...+|++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEEE
Confidence 46999999999999999999999999999999999887766667788999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||.+.|+|+..|......++++..+..++.|++.||.|+|..+||||||||+|+|++. .+.+||+|||.+.... .
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~lkiAdfGwsV~~p-~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAP-S 176 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCCeeccCCCceeecC-C
Confidence 99999999999997778888999999999999999999999999999999999999994 7889999999997765 4
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
..-.+.|||..|.|||+..+. .+..+|+||+|++.||++.|.+||...+..++++.+.+....++ +.++..+.++
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~dl 252 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAADL 252 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHHH
Confidence 455688999999999999875 48899999999999999999999999999999999988776555 5799999999
Q ss_pred HHHcCccCccCCCCHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
|.+||..+|.+|.+..+++.|||+...
T Consensus 253 I~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHhccCccccccHHHHhhhHHHHhc
Confidence 999999999999999999999998753
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-50 Score=399.03 Aligned_cols=255 Identities=29% Similarity=0.566 Sum_probs=230.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|+.+.|.+.||||.+.+.... ......+.+|++|++.|+ |||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 4789999999999999999999999999999999876543 346788999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+.| +|+.++ ..++.++++.++.++.+++.||.|||+++|+|||+||.||||+ ..+++|+||||+|+....+
T Consensus 80 te~a~g-~L~~il--~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~---~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 80 TEYAVG-DLFTIL--EQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE---KGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred ehhhhh-hHHHHH--HhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec---CCCceeechhhhhhhcccC
Confidence 999977 999988 5567899999999999999999999999999999999999998 5899999999999987655
Q ss_pred CC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. ...+.|||.|||||.+.+. ++..+|+||||||+|||++|++||...+...+.+.|......++ +.++..+..
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p----~~~S~~f~n 229 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP----STASSSFVN 229 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc----ccccHHHHH
Confidence 44 3567899999999998765 58899999999999999999999999999889988888765443 478999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
|+..+|.+||.+|+++.+++.|||.+...
T Consensus 230 fl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 230 FLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred HHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 99999999999999999999999998753
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-50 Score=398.09 Aligned_cols=260 Identities=31% Similarity=0.547 Sum_probs=226.4
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+....|...++||+|+-|.||.+....+++.||||.+..... ...+-+.+|+.+|+.++ |+|||.+++.|...+.
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDE 344 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhcc-chHHHHHHHHhcccce
Confidence 4455678999999999999999999999999999999987653 34567899999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||++||+|.+.+. ...+++.+++.|+++++.||+|||.+||||||||.+|||++ .++.|||+|||+|..
T Consensus 345 LWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaq 418 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQ 418 (550)
T ss_pred eEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeec
Confidence 999999999999988773 24599999999999999999999999999999999999999 578899999999988
Q ss_pred cCCCC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC-CCCCCCCCCCCCC
Q 008547 252 IKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSIS 328 (562)
Q Consensus 252 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 328 (562)
+.... .-.+.+|||.|||||++.. .|++++||||||++++||+-|.+||...+....+..+... .+.+. .+..+|
T Consensus 419 i~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk--~~~klS 496 (550)
T KOG0578|consen 419 ISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK--NPEKLS 496 (550)
T ss_pred cccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC--CccccC
Confidence 76544 4567899999999999865 6799999999999999999999999876665555555443 33333 346799
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+++++||.+||+.|+.+|++|.++|+||||+....
T Consensus 497 ~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 497 PELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred HHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 99999999999999999999999999999976543
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=371.22 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=220.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~~~~~ 173 (562)
+.|+.+..|++|+||.||+|+++.|++.||+|+++....... ..-..++||++|.+++ |||||.+-++.. .-+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G-FPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG-FPITSLREINILLKAR-HPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC-CcchhHHHHHHHHhcC-CCCeeeeEEEEeccccceee
Confidence 468999999999999999999999999999999875542221 2223569999999995 999999998776 445799
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+. +|...+.. ..++++..+++.++.|++.||+|||.++|+||||||+|+|+. ..|.+||+|||+|+.+.
T Consensus 154 ~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhc
Confidence 99999976 77776643 347899999999999999999999999999999999999998 68999999999999876
Q ss_pred CC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC----
Q 008547 254 PG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS---- 326 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---- 326 (562)
.. ..++..+-|.||+|||.+.+ .|++++|+||+|||+.||+++++.|.+.++.+.+.+|+..........||.
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 54 45677889999999999876 468999999999999999999999999999988888876333222223322
Q ss_pred ------------------------CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 ------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 ------------------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+++...+|+..+|.+||.+|.||.++|+|+||.+..
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 457788999999999999999999999999999854
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-49 Score=379.46 Aligned_cols=264 Identities=28% Similarity=0.485 Sum_probs=230.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|.+...||.|.-+.||+|+...++..||||++..+.... ..+.+.+|+..++.+ +||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence 47999999999999999999999999999999998776543 478899999999988 699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|.||.+|++++.+...-...+++..+..|+++++.||.|||++|.||||||+.||||+ .+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~---~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID---SDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc---CCCcEEEcCceeeeeeccc
Confidence 9999999999999776666799999999999999999999999999999999999999 589999999998755432
Q ss_pred CCC----cccccCCCcccCchhcc---cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC------CC
Q 008547 255 GKK----FQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------RR 321 (562)
Q Consensus 255 ~~~----~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------~~ 321 (562)
+.. +.+.+||++|||||++. .+|+.|+|||||||+.+||++|..||......+++-.-+++.+.. +.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 221 25679999999999964 367999999999999999999999999998888777777766532 22
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
.....++..++.++..||..||.+||||+++|+|+||+......
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence 22334677899999999999999999999999999999876544
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-49 Score=384.84 Aligned_cols=257 Identities=34% Similarity=0.575 Sum_probs=214.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--eEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--~~~l 174 (562)
+|..++.||+|+||.||++.+..+|...|||.+..... + ..+.+.+|+.+|.+|. |||||+++|...... .+++
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~-~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--P-TSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--h-hHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEe
Confidence 57889999999999999999999999999999876521 1 2677899999999996 999999999755444 6999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
.|||+++|+|.+++....+ .+++..++.+.+||++||.|||++|||||||||+|||++. .++.+||+|||++.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~--~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP--SNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC--CCCeEEeccCcccccccc
Confidence 9999999999999866554 8999999999999999999999999999999999999983 268999999999987653
Q ss_pred ----CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 255 ----GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 255 ----~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
........||+.|||||++..+. .+++|||||||++.||+||++||... .....+..+..... .+ .....+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~-~P-~ip~~l 248 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDS-LP-EIPDSL 248 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCC-CC-CCCccc
Confidence 12234578999999999998543 35999999999999999999999873 33333334433331 11 223468
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
|+++++||.+|+..||++||||.++|+|||.+...
T Consensus 249 s~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 249 SDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 99999999999999999999999999999998644
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-49 Score=373.60 Aligned_cols=265 Identities=33% Similarity=0.560 Sum_probs=221.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~---- 168 (562)
.+..+|...+.||.|+||.|+.+.++.+|+.||||++... .......+...+|+.+|+.++ |+||+.+++.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccc
Confidence 3456777789999999999999999999999999998633 233456778899999999996 9999999998875
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
-+.+|+|+|+|+ -+|...+ +.++.++..++..+++||+.||.|+|+.+|+||||||+|+|++ .+..+||+|||
T Consensus 97 ~f~DvYiV~elMe-tDL~~ii--k~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n---~~c~lKI~DFG 170 (359)
T KOG0660|consen 97 KFNDVYLVFELME-TDLHQII--KSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN---ADCDLKICDFG 170 (359)
T ss_pred ccceeEEehhHHh-hHHHHHH--HcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec---cCCCEEecccc
Confidence 457999999994 4777766 3345599999999999999999999999999999999999998 57889999999
Q ss_pred CccccCC---CCCcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH---------
Q 008547 248 LSDFIKP---GKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL--------- 313 (562)
Q Consensus 248 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~--------- 313 (562)
+|+...+ ...++.++.|.||+|||++. ..|+.++||||+||||.||++|++.|.+.+.-..+..++
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 9998754 34457789999999999874 367899999999999999999999998877654444332
Q ss_pred --------------hCCCCCCCCC----CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 314 --------------RNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 314 --------------~~~~~~~~~~----~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
+..+..+..+ +|+.++.+.+|+.+||..||.+|+|++++|.||||...-...
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~ 320 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE 320 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence 2222222222 467899999999999999999999999999999999865443
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-49 Score=382.98 Aligned_cols=260 Identities=34% Similarity=0.648 Sum_probs=224.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-----------hhHHHHHHHHHHHHHccCCCCcceEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----------IAVEDVKREVKILQALAGHENVVKFY 163 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~~hp~iv~l~ 163 (562)
-++|.+++.||+|.||.|-+|++..+++.||||++.+...... ...+.+.+||.||++|. |||||+|+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEEE
Confidence 3579999999999999999999999999999999976433211 12357899999999995 99999999
Q ss_pred EEEEc--CCeEEEEEeccCCCChHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 164 NAFED--DNYVYIAMELCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 164 ~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
++..+ .+.+|||+|||..|.+... ..... +++.+++.|+++++.||+|||.+|||||||||+|+||+ .+++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CCCc
Confidence 99985 4679999999998876442 23344 89999999999999999999999999999999999999 5799
Q ss_pred eEEeeccCccccCCC------CCcccccCCCcccCchhcccC-----CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHH
Q 008547 241 LKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 309 (562)
Q Consensus 241 vkl~DfG~a~~~~~~------~~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 309 (562)
|||+|||.+.....+ ......+|||.|+|||++.++ .+.+.||||+||+||+|+.|+.||.+....+++
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 999999998765322 123457999999999987652 277899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+|......|+.. +.+.+.+++||.+||++||++|++..++..|||......
T Consensus 329 ~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 329 DKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred HHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999998888765 468899999999999999999999999999999987643
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=377.05 Aligned_cols=256 Identities=32% Similarity=0.628 Sum_probs=237.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...+|.+.+.||+|.||+|-+|.+...|+.||||.|.+......+..-.+.+||+||..| +||||+++|++|+..+.+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEE
Confidence 345899999999999999999999999999999999999888888888999999999999 6999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|||||..+|+|++++ ...+.+++..++.+++||++|+.|||.++++|||||.+||||+ .++++||+|||++....
T Consensus 130 ivMEYaS~GeLYDYi--Ser~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD---~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 130 IVMEYASGGELYDYI--SERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD---QNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEecCCccHHHHH--HHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec---CCCCeeeeccchhhhhc
Confidence 999999999999999 4557899999999999999999999999999999999999999 58899999999999888
Q ss_pred CCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.....+++||+|-|.+||+++|.. ++.+|.||||++||-|+.|.+||.+.+...+.++|..+... . |.-|..+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr--E---P~~PSdA 279 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR--E---PETPSDA 279 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc--C---CCCCchH
Confidence 888899999999999999999865 88999999999999999999999999999999999887532 2 3456778
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.-||+.||-.||++|.|+.++-.|=|+.-
T Consensus 280 ~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 280 SGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred HHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 99999999999999999999999988764
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=380.50 Aligned_cols=260 Identities=27% Similarity=0.430 Sum_probs=219.0
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|++.+.||+|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.+ +||||+.+++++.+.+.+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 78899999999999999999999999999998765433333445678999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~ 257 (562)
|+++|+|...+.......+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcEEcCCCCe
Confidence 99999998877655455789999999999999999999999999999999999998 478899999999987655444
Q ss_pred cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 258 FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 258 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
.....||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+..............+++++.+||.
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 556689999999998865 5688999999999999999999999876554333333222222222223468899999999
Q ss_pred HcCccCccCCCC-----HHHHhcCcccccc
Q 008547 337 KLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 337 ~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+||+.||.+||+ ++++++||||+..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 999999999997 8999999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-48 Score=377.89 Aligned_cols=265 Identities=32% Similarity=0.636 Sum_probs=241.4
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
++..+..-|.+.+.||+|.|+.|-+|++..||..||||++++.++.. .....+..|++.|+.++ |||||+||++....
T Consensus 12 ~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 12 YDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQ 89 (864)
T ss_pred cccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhc-CcCeeeeeehhccc
Confidence 34456677999999999999999999999999999999999987654 45678899999999995 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
..+|||+|+-.+|+|++++.... ..+.+..++.++.||+.|+.|||+..+|||||||+||++-. +-|-|||+|||++
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE--KlGlVKLTDFGFS 166 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE--KLGLVKLTDFGFS 166 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee--ecCceEeeecccc
Confidence 99999999999999999997654 56999999999999999999999999999999999999874 6789999999999
Q ss_pred cccCCCCCcccccCCCcccCchhcccC-C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
..+.++....+.||+..|-|||++.|. | .+++||||||||||.|++|++||...+..+.+-.|+......+ ..+
T Consensus 167 Nkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP----shv 242 (864)
T KOG4717|consen 167 NKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP----SHV 242 (864)
T ss_pred ccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc----hhh
Confidence 999999999999999999999998775 3 6889999999999999999999999999999988887655443 358
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+.++++||..||..||.+|.+.++|..|+|++....
T Consensus 243 S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 243 SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 999999999999999999999999999999997654
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=379.46 Aligned_cols=253 Identities=28% Similarity=0.528 Sum_probs=221.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 689999999999999999999999999999998754433334556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcchhccCC-
Confidence 99999999998843 35789999999999999999999999999999999999998 4789999999999865432
Q ss_pred CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++ ..+++.+.+||
T Consensus 155 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li 229 (291)
T cd05612 155 -TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP----RHLDLYAKDLI 229 (291)
T ss_pred -cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC----ccCCHHHHHHH
Confidence 2345799999999998654 58899999999999999999999999888888888877665443 34688999999
Q ss_pred HHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 336 KKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 336 ~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
.+||..||.+||+ +.++++||||+..
T Consensus 230 ~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 230 KKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 9999999999995 9999999999753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-47 Score=384.71 Aligned_cols=254 Identities=31% Similarity=0.565 Sum_probs=222.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEE
Confidence 4699999999999999999999999999999998765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccCceEcCCC
Confidence 999999999998853 45789999999999999999999999999999999999998 5789999999999865432
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+..+...++ ..++..+.+|
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 245 (329)
T PTZ00263 172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDGRARDL 245 (329)
T ss_pred --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----CCCCHHHHHH
Confidence 2346899999999998654 58899999999999999999999998888778888776654332 2478899999
Q ss_pred HHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
|.+||..||.+||+ +.+++.||||+..
T Consensus 246 i~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 246 VKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99999999999997 7999999999863
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-47 Score=387.57 Aligned_cols=258 Identities=28% Similarity=0.469 Sum_probs=219.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.++..+ +||||+++++.+.+...+|+||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEE
Confidence 689999999999999999999999999999999765433344556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcccccccc
Confidence 99999999998853 46799999999999999999999999999999999999998 47899999999987543211
Q ss_pred ------------------------------------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCC
Q 008547 257 ------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP 299 (562)
Q Consensus 257 ------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~p 299 (562)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0124589999999999865 468899999999999999999999
Q ss_pred CCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCcc---CCCCHHHHhcCcccccc
Q 008547 300 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR---ARLTAAQALSHPWVREG 361 (562)
Q Consensus 300 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~---~Rps~~~~l~hp~f~~~ 361 (562)
|.+....+.+..+.........+....+++++.+||.+|+. +|. .||++.++++||||+..
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 236 FCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 99888888888877644333333344588999999999776 454 45899999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-48 Score=356.29 Aligned_cols=268 Identities=32% Similarity=0.622 Sum_probs=238.3
Q ss_pred cccceeecc-eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE----c
Q 008547 94 FDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----D 168 (562)
Q Consensus 94 ~~~~y~i~~-~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~----~ 168 (562)
+.++|.|.. +||-|-.|+|-.+.++.||+.+|+|++... ...++|+++--....|||||.++++|. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 566787754 899999999999999999999999988533 345678887766678999999999886 4
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..++.+|||.++||+|++.+..+..+.+++.++..|+.||+.|+.|||+.+|.||||||+|+|......+..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 56789999999999999999888888899999999999999999999999999999999999999877888999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC----hhhHHHHHHhCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~ 323 (562)
|+.........+.|-||.|.|||++.. .++..+|+||+||++|-|++|.+||.... ...+...|..+...|+.+.
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE 290 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE 290 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChh
Confidence 998766667788899999999999964 57888999999999999999999997653 4567888999999999999
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~ 369 (562)
|..+|+.++++|+.+|..+|.+|.|+.++++|||+.....-...+.
T Consensus 291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl 336 (400)
T KOG0604|consen 291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPL 336 (400)
T ss_pred HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCc
Confidence 9999999999999999999999999999999999998765444443
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-47 Score=382.90 Aligned_cols=250 Identities=30% Similarity=0.537 Sum_probs=217.3
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765443344556788999999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++... .......
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 80 GELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccCCCcccc
Confidence 999888743 46789999999999999999999999999999999999998 47889999999987532 2233445
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++ ..+++++.+||.+||
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L 230 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLL 230 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHc
Confidence 689999999999865 468999999999999999999999988887777777766554433 458899999999999
Q ss_pred ccCccCCC-----CHHHHhcCcccccc
Q 008547 340 VKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
..||++|| ++.++++||||+..
T Consensus 231 ~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 231 KKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred cCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999999 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-47 Score=377.79 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=211.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCE-EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-eEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~-vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-~~~lv 175 (562)
..+.+.||+|+||+||+|.++ |.. ||||++......... .+.|.+|+.+|.+|+ |||||+++|+|.... .++||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 455667999999999999754 666 999999766544333 789999999999995 999999999999887 79999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCceEeccCCCCC-CeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~NIll~~~~~~~-~vkl~DfG~a~~~~ 253 (562)
|||+++|+|..++.......++...+..++.+|+.||.|||+++ ||||||||+|||++ .++ ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCccceeec
Confidence 99999999999986645678999999999999999999999999 99999999999999 465 99999999998765
Q ss_pred CC-CCcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PG-KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.. .......||+.|||||++.+. ++.++|||||||+||||+||+.||.+.....+...+.........+ ...++
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~ 273 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KECPP 273 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCH
Confidence 44 344457899999999999854 7999999999999999999999999888766666665444322211 23889
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+..||.+||..||.+||+..+++.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999999999999999988864
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-47 Score=360.83 Aligned_cols=262 Identities=30% Similarity=0.472 Sum_probs=221.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC-cceEEEEEEcCC----
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDN---- 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~-iv~l~~~~~~~~---- 170 (562)
..|..+++||+|+||+||+|+++.+|+.||+|++...... +.......+|+.+|+.|+ |+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 4578888899999999999999999999999999765432 223455689999999995 999 999999998877
Q ss_pred --eEEEEEeccCCCChHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 171 --YVYIAMELCEGGELLDRILAKKD--SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
.+++|+||+.. +|..++..... ..++...++.+++||+.||.|||+++|+||||||.||||+ ..+.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeecc
Confidence 89999999965 88888754432 3678899999999999999999999999999999999999 4899999999
Q ss_pred cCccccC-CCCCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC
Q 008547 247 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 247 G~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 323 (562)
|+|+... +...+...++|.+|+|||++.+. |++..||||+|||++||++++..|.+.++.+.+..+.+-........
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9998765 44557778999999999998764 68999999999999999999999999999888877765332222222
Q ss_pred CC--------------------------CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 324 WP--------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 324 ~~--------------------------~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
|| ..++...+++.+||+.+|.+|.|+..+|.||||.+...
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 32 23357899999999999999999999999999998754
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=381.73 Aligned_cols=257 Identities=32% Similarity=0.527 Sum_probs=222.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.++..+. ||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEE
Confidence 6899999999999999999999999999999997654333345567889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCCccccc--
Confidence 9999999999884 345789999999999999999999999999999999999998 478999999999976543
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC----CCCCHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSA 331 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 331 (562)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+....+......+..+.+ ..+++++
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~ 233 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEA 233 (333)
T ss_pred ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHH
Confidence 3345689999999999865 4688999999999999999999999888877777766654333322222 2578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+||.+||..+|.+||++.++++||||+..
T Consensus 234 ~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 234 WDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred HHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-47 Score=384.58 Aligned_cols=263 Identities=30% Similarity=0.439 Sum_probs=222.3
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCC-----CCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-----ENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~l~~~~ 166 (562)
+.+..+|.|.+.||+|+||.|-+|.+..|++.||||+++... ....+...|+.+|..|..| -|||+++++|
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 445568999999999999999999999999999999997664 3556677899999999633 5899999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
...+++|||+|++. -+|++++..++...++...++.++.||+.||.+||+.||||+||||+||||.... ...|||+||
T Consensus 258 ~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDF 335 (586)
T KOG0667|consen 258 YFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDF 335 (586)
T ss_pred ccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEec
Confidence 99999999999995 5999999999989999999999999999999999999999999999999998654 448999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC-------
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------- 318 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~------- 318 (562)
|.|++... ...+++.+..|+|||++.| .++.+.||||||||++||++|.+.|.+.++.+.+..|..-...
T Consensus 336 GSSc~~~q--~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 336 GSSCFESQ--RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccccccCC--cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99988643 3348899999999998866 6799999999999999999999999999887776665321000
Q ss_pred --------CCC--------------------------------CCCC------------CCCHHHHHHHHHcCccCccCC
Q 008547 319 --------FRR--------------------------------KPWP------------SISNSAKDFVKKLLVKDPRAR 346 (562)
Q Consensus 319 --------~~~--------------------------------~~~~------------~~~~~~~~ll~~~l~~dP~~R 346 (562)
|.. ...| .-...+.+||.+||.+||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 000 0001 012357899999999999999
Q ss_pred CCHHHHhcCccccccC
Q 008547 347 LTAAQALSHPWVREGG 362 (562)
Q Consensus 347 ps~~~~l~hp~f~~~~ 362 (562)
+|+.++|+||||+...
T Consensus 494 ~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 494 ITPAQALNHPFLTGTS 509 (586)
T ss_pred CCHHHHhcCccccccc
Confidence 9999999999999543
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=386.73 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=221.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 689999999999999999999999999999999765433344556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEeecccceeccccc
Confidence 99999999998854 35799999999999999999999999999999999999998 57899999999986542211
Q ss_pred ---------------------------------------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhC
Q 008547 257 ---------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG 296 (562)
Q Consensus 257 ---------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g 296 (562)
.....+||+.|+|||++.. .++.++|||||||++|+|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 0113479999999998765 468999999999999999999
Q ss_pred CCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC---HHHHhcCcccccc
Q 008547 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 297 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
..||.+.+..+....+......+..+....+++++.+||.+||. +|.+|++ +.+++.||||+..
T Consensus 236 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 236 YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 99999888877777776654444433334678999999999997 9999998 9999999999864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=363.60 Aligned_cols=257 Identities=30% Similarity=0.537 Sum_probs=217.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CC---e
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN---Y 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~---~ 171 (562)
.|.-.+++|+|+||.||+|....+++.||||++-..... -.+|+.+|+.+ +|||||++..+|.. ++ +
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhH
Confidence 688899999999999999999999999999988654422 23699999988 59999999988763 22 4
Q ss_pred EEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 172 VYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
+.+||||++. +|...+.. ..+..++.-.++.+.+||++||.|||+.||+||||||.|+|+|. +.+.+||||||.|
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~--~tg~LKicDFGSA 173 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP--DTGVLKICDFGSA 173 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC--CCCeEEeccCCcc
Confidence 5689999976 88887743 23567899999999999999999999999999999999999996 6799999999999
Q ss_pred cccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC------------
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN------------ 315 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~------------ 315 (562)
+.+..++....+..|..|+|||.+.+ .|+.+.||||.|||+.||+-|++.|.+.+....+..+.+.
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 99988888788889999999998876 5799999999999999999999999998887776666431
Q ss_pred C--------CCCCCCCC-----CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 316 K--------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 316 ~--------~~~~~~~~-----~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
. +.+....| ..+++++.+|+.++|..+|.+|.++.+++.||||.+....
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 1 11111222 3478999999999999999999999999999999987654
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=381.28 Aligned_cols=254 Identities=31% Similarity=0.562 Sum_probs=220.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
++|.+.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEE
Confidence 46999999999999999999876655 68999998765433344566788999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEecCCCCeecCC
Confidence 9999999999998843 35789999999999999999999999999999999999998 578999999999986543
Q ss_pred CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..+......++ +.+++.+.+
T Consensus 184 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ 257 (340)
T PTZ00426 184 --RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKH 257 (340)
T ss_pred --CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHH
Confidence 23456899999999998654 58899999999999999999999998888777888777654433 357899999
Q ss_pred HHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+|++||..||.+|+ ++.++++||||+..
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999999999995 89999999999864
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=384.45 Aligned_cols=259 Identities=29% Similarity=0.482 Sum_probs=223.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999998754333333455678999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 122 MEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCCEEEEeccceeeccCC
Confidence 999999999987732 3588999999999999999999999999999999999998 5789999999999765433
Q ss_pred C--CcccccCCCcccCchhccc-----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 K--KFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.........+....++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEIS 275 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCC
Confidence 2 2235679999999998754 25789999999999999999999999988888888887765444444445689
Q ss_pred HHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
.++.+||.+||..+|.+ |+++.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 276 KQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99999999999999998 9999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=385.14 Aligned_cols=259 Identities=30% Similarity=0.461 Sum_probs=217.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+++.||+|+||+||+|.+..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999765444444567789999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++||+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+||||+ .++++||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 81 DYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCccccccc
Confidence 99999999998854 35689999999999999999999999999999999999998 47899999999975321000
Q ss_pred ------------------------------------------------CcccccCCCcccCchhccc-CCCCCcchHHHH
Q 008547 257 ------------------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 287 (562)
Q Consensus 257 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 287 (562)
.....+||+.|+|||++.+ .++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0123579999999998865 468899999999
Q ss_pred HHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCc--cCccCCCCHHHHhcCcccccc
Q 008547 288 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV--KDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 288 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~--~dP~~Rps~~~~l~hp~f~~~ 361 (562)
|++|||++|..||...........+.........+.+..+++++.+||.+|+. .+|..|+++.+++.||||+..
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999999999998877766666665543333444445689999999999654 455569999999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=375.29 Aligned_cols=248 Identities=26% Similarity=0.490 Sum_probs=216.0
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.+ +||||+++++++...+..|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999998765433344567788999999999 59999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccccc
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIV 262 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~~~ 262 (562)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......+
T Consensus 80 L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 80 LFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECcccccCccCCCcccccc
Confidence 9998854 45789999999999999999999999999999999999998 578999999999975432 22334568
Q ss_pred CCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCcc
Q 008547 263 GSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341 (562)
Q Consensus 263 gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 341 (562)
||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++ ..+++++.+||.+||..
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~ 230 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSR 230 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCC
Confidence 99999999998654 58899999999999999999999998888888887776654433 45889999999999999
Q ss_pred CccCCC---CHHHHhcCcccccc
Q 008547 342 DPRARL---TAAQALSHPWVREG 361 (562)
Q Consensus 342 dP~~Rp---s~~~~l~hp~f~~~ 361 (562)
||.+|| ++.++|.||||+..
T Consensus 231 dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 231 DPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CHHHcCCCCCHHHHHcCCCcCCC
Confidence 999997 58999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-47 Score=377.69 Aligned_cols=245 Identities=27% Similarity=0.391 Sum_probs=212.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.+.+++.||+|.||+||.|.+..+ ..||+|.+....+ ..+.|.+|+++|++|+ |++||+++++|..++.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEE
Confidence 467788999999999999986543 3799999876543 4467889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
|||+.|+|.++|.......+...+.+.++.|||+|++||+++++|||||-..|||++ ++..|||+|||+|+.+..+.
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~vKIsDFGLAr~~~d~~ 357 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVVKISDFGLARLIGDDE 357 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceEEEcccccccccCCCc
Confidence 999999999999776678899999999999999999999999999999999999999 57899999999999554332
Q ss_pred Ccc--cccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 257 KFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 257 ~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
... ..--...|+|||++. +.++.+||||||||+||||+| |+.||.+.+..++++.+.++.... ..+.+|+++.
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp---~P~~CP~~vY 434 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP---RPEGCPDEVY 434 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC---CCCCCCHHHH
Confidence 211 112245699999986 567999999999999999999 999999999999999998876433 3367899999
Q ss_pred HHHHHcCccCccCCCCHHHHh
Q 008547 333 DFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l 353 (562)
++|..||..+|++|||.+.+.
T Consensus 435 ~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 435 ELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999998654
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=385.70 Aligned_cols=258 Identities=31% Similarity=0.502 Sum_probs=220.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++.+.+++.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 589999999999999999999999999999998765433344567889999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++|+|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 81 DYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEeECCCCccccccc
Confidence 99999999998844 35789999999999999999999999999999999999998 5789999999997532100
Q ss_pred -----------------------------------------------CCcccccCCCcccCchhccc-CCCCCcchHHHH
Q 008547 256 -----------------------------------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 287 (562)
Q Consensus 256 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 287 (562)
......+||+.|+|||++.+ .++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00123579999999998865 568999999999
Q ss_pred HHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC---HHHHhcCcccccc
Q 008547 288 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 288 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
|++|||++|++||.+.+..+....+.........+....+++++.++|.+|+ .+|.+|++ +.++++||||+..
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 9999999999999988877777777665544444455678999999999986 59999997 9999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=374.32 Aligned_cols=256 Identities=29% Similarity=0.498 Sum_probs=223.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|...+.||+|+||.||+|.+..+++.||||++..... ....+.+..|+.+|..+. ++||.++|+.+..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~--~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc--chhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHH
Confidence 357888999999999999999999999999999987654 235678999999999994 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||.||++.+.+ ..+..+.+..+..++++++.||.|||..+.+|||||+.|||+. ..+.|||+|||.+.+....
T Consensus 90 Mey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 90 MEYCGGGSVLDLL--KSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHhcCcchhhhh--ccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeech
Confidence 9999999999988 4445568999999999999999999999999999999999998 4699999999999876543
Q ss_pred CC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. ..+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+.+.....++..|-+..+... -..+++.+++
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L---~~~~S~~~kE 241 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL---DGDFSPPFKE 241 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc---ccccCHHHHH
Confidence 32 368899999999999987 679999999999999999999999988777555544444332221 2367899999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
||..||..||+.||+|.++|+|+|++..+
T Consensus 242 FV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 242 FVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred HHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 99999999999999999999999999844
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=385.03 Aligned_cols=258 Identities=27% Similarity=0.492 Sum_probs=217.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+++.||.|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 689999999999999999999999999999998765433344567788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++||+|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeeccccccccccc
Confidence 99999999998843 46789999999999999999999999999999999999998 57899999999986321100
Q ss_pred ------------------------------------------------CcccccCCCcccCchhccc-CCCCCcchHHHH
Q 008547 257 ------------------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 287 (562)
Q Consensus 257 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 287 (562)
.....+||+.|+|||++.+ .++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0012479999999998865 468999999999
Q ss_pred HHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCC---CCHHHHhcCcccccc
Q 008547 288 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVREG 361 (562)
Q Consensus 288 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R---ps~~~~l~hp~f~~~ 361 (562)
|++|||++|.+||.+....+.+..+.........+....++.++.+||.+||. +|.+| +++.+++.||||+..
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 99999999999998888777777776543333333334578999999999998 77775 599999999999853
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-46 Score=375.68 Aligned_cols=250 Identities=29% Similarity=0.532 Sum_probs=216.0
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||++.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999765443444567788999999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 80 g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 80 GELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCccccccc
Confidence 999887743 45789999999999999999999999999999999999998 478899999999875322 223345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+..+....+......++ ..+++++.+||.+||
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L 230 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLL 230 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHc
Confidence 689999999999865 468899999999999999999999988877777776665544333 458899999999999
Q ss_pred ccCccCCC-----CHHHHhcCcccccc
Q 008547 340 VKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
..||.+|+ ++.++++||||...
T Consensus 231 ~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 231 IKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999997 89999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-46 Score=381.57 Aligned_cols=259 Identities=29% Similarity=0.480 Sum_probs=221.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.++..+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998764433333456688999999998 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 122 ~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 122 MEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEEecccceecccC
Confidence 999999999998742 3589999999999999999999999999999999999998 5789999999999876432
Q ss_pred CC--cccccCCCcccCchhcccC-----CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 KK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.. ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+......+..+....++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 275 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEIS 275 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCC
Confidence 22 2356899999999998642 5789999999999999999999999888888888887655444433344679
Q ss_pred HHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
..+++++..||..+|.+ |+++.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 99999999999865544 8999999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-46 Score=374.75 Aligned_cols=251 Identities=30% Similarity=0.550 Sum_probs=216.9
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.++.+++.||||++.+.........+.+..|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987654333345567788999998876799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... .......
T Consensus 81 g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 81 GDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred chHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCeecCcCCCcccc
Confidence 999887743 45799999999999999999999999999999999999998 47899999999987542 2233345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+......++ ..+++++.+||.+||
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L 231 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFM 231 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHc
Confidence 689999999999865 458899999999999999999999999888888888876554332 347899999999999
Q ss_pred ccCccCCCCH------HHHhcCcccccc
Q 008547 340 VKDPRARLTA------AQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rps~------~~~l~hp~f~~~ 361 (562)
+.||.+||++ .++++||||+..
T Consensus 232 ~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 232 TKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred ccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 9999999998 999999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=385.05 Aligned_cols=258 Identities=28% Similarity=0.466 Sum_probs=218.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++.+.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 689999999999999999999999999999998754433333456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++|+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCccccccc
Confidence 99999999998843 45789999999999999999999999999999999999998 5789999999997532100
Q ss_pred -------------------------------------------CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHH
Q 008547 256 -------------------------------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY 291 (562)
Q Consensus 256 -------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~ 291 (562)
......+||+.|+|||++.+ .++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00123579999999999865 4588999999999999
Q ss_pred HHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCC---CHHHHhcCcccccc
Q 008547 292 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 361 (562)
Q Consensus 292 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rp---s~~~~l~hp~f~~~ 361 (562)
+|++|+.||.+....+....+.........+.+..+++++.++|.+|+ .+|.+|+ ++.++++||||+..
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 999999999888877776666654444444445578999999999987 4999999 99999999999863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=381.36 Aligned_cols=258 Identities=33% Similarity=0.610 Sum_probs=223.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.++..+ +||||+++++++.+++.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 699999999999999999999999999999999765433334567788999999999 4999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCCccCcccC
Confidence 999999999988543 6799999999999999999999999999999999999998 57899999999997654332
Q ss_pred ------------------------------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 257 ------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 257 ------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 22345799999999998664 58899999999999999999999998887
Q ss_pred hhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC-HHHHhcCcccccc
Q 008547 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 361 (562)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps-~~~~l~hp~f~~~ 361 (562)
......+.........+..+.+++++.+||.+||. ||.+||+ +.++++||||+..
T Consensus 236 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 77777777643333444445579999999999998 9999999 9999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-46 Score=374.06 Aligned_cols=250 Identities=31% Similarity=0.545 Sum_probs=216.2
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||++.+..+|+.||+|++.............+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 4699999999999999999999999998765433344556778899999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 80 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 80 GELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhccccCCCCcccc
Confidence 99988774 345789999999999999999999999999999999999998 478999999999875322 233345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+.......+......++ ..+++++.+||.+||
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L 230 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLL 230 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHc
Confidence 689999999999865 468899999999999999999999988887777777765544333 357899999999999
Q ss_pred ccCccCCC-----CHHHHhcCcccccc
Q 008547 340 VKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
..||.+|| ++.++++||||...
T Consensus 231 ~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 231 KKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred cCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 99999998 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=365.87 Aligned_cols=261 Identities=28% Similarity=0.451 Sum_probs=218.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.+ +||||+++++.+..++.+++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence 488999999999999999999999999999998765433333445678899999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|...+.......+++..+..++.||+.||.|||+.||+||||||+||+++ +++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCCceecCCCC
Confidence 999999998877655456799999999999999999999999999999999999998 57889999999998765444
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
.....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+............+.+++.+.+||
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC 236 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence 4445689999999998865 458889999999999999999999987665443333322221122222345889999999
Q ss_pred HHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 336 KKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 336 ~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
.+||..||.+|| ++.++++||||...
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 999999999999 99999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=372.76 Aligned_cols=256 Identities=26% Similarity=0.463 Sum_probs=220.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+++.||||++.+.........+.+..|+.++..+.+|++|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999999999999999876543333456678899999999965567889999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~ 255 (562)
||+++|+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ..
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCC
Confidence 9999999998874 345789999999999999999999999999999999999998 47899999999987532 22
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++ ..+++++.++
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~l 231 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSI 231 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 333456899999999998764 58899999999999999999999998888888887776554333 3578999999
Q ss_pred HHHcCccCccCCCCH-----HHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLTA-----AQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps~-----~~~l~hp~f~~~ 361 (562)
+.+||..||.+|+++ .++++||||+..
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999999999976 899999999863
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=366.90 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=210.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+ +||||+++++++...+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEE
Confidence 369999999999999999999999999999999865432 12345677999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++ +|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 82 FEYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARAKSVP 156 (288)
T ss_pred EeCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceeeccCC
Confidence 999975 88887743 334678999999999999999999999999999999999998 4788999999998764322
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-----------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----------- 321 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 321 (562)
.......+|+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+.........
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 22344578999999998854 4588999999999999999999999887766555544331111000
Q ss_pred ---------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 322 ---------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 322 ---------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
...+.+++++.+||.+||++||.+|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0123467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-47 Score=350.25 Aligned_cols=270 Identities=36% Similarity=0.629 Sum_probs=235.1
Q ss_pred cccceee-cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 94 ~~~~y~i-~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
|.+-|++ .+.||+|+||.|-.+....+|..||||++.+.. ......+.+|++++...++|+||++|+++|++++.+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 3445666 458999999999999999999999999998874 356788999999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||||-|.||.|+.++.. ...+++..+.++.++|+.||.|||.+||.||||||+|||....+.-.-||||||.+..-+
T Consensus 152 YLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~ 229 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI 229 (463)
T ss_pred EEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence 999999999999999954 467999999999999999999999999999999999999987555567999999987654
Q ss_pred CCC--------CCcccccCCCcccCchhcc---c---CCCCCcchHHHHHHHHHHHhCCCCCCCCC--------------
Q 008547 253 KPG--------KKFQDIVGSAYYVAPEVLK---R---KSGPESDVWSIGVITYILLCGRRPFWDKT-------------- 304 (562)
Q Consensus 253 ~~~--------~~~~~~~gt~~y~aPE~~~---~---~~~~~~DiwslG~il~el~~g~~pf~~~~-------------- 304 (562)
.-. ....+.+|+..|||||+.. + -|..++|.||||+|||-|++|.+||.+.-
T Consensus 230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~ 309 (463)
T KOG0607|consen 230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV 309 (463)
T ss_pred ccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHH
Confidence 322 1234578999999999753 2 35789999999999999999999996543
Q ss_pred -hhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCC
Q 008547 305 -EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368 (562)
Q Consensus 305 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~ 368 (562)
...+++.|..+..+|+...|..+|.+.+++++.+|..|+.+|.++.++++|||++.......+|
T Consensus 310 CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalp 374 (463)
T KOG0607|consen 310 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALP 374 (463)
T ss_pred HHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCC
Confidence 2357888999999999999999999999999999999999999999999999999876554444
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-47 Score=353.37 Aligned_cols=256 Identities=31% Similarity=0.558 Sum_probs=236.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|..+++||+|.||+|-+++.+.+|+.+|||+++++..........-+.|-++|+..+ ||++..+...|+..+.+|+|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEEE
Confidence 46889999999999999999999999999999999888777777888899999999985 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc-cCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~-~~~ 254 (562)
|||+.||.|+-+| ++...+++..++.+...|+.||.|||+++||+||||.+|.||+ .+|++||+|||+++. +..
T Consensus 247 MeyanGGeLf~HL--srer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD---kDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 247 MEYANGGELFFHL--SRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD---KDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEccCceEeeeh--hhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec---cCCceEeeecccchhcccc
Confidence 9999999999888 4456799999999999999999999999999999999999999 689999999999975 455
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
+..+.++||||.|+|||++.. .|+.++|+|.+|+++|||++|+.||...+...++..|+.....|+. .++++++.
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAkt 397 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKT 397 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHH
Confidence 677889999999999999965 5799999999999999999999999999999999999888877764 68999999
Q ss_pred HHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|+..+|..||.+|. .+.++.+|+||...
T Consensus 398 LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 398 LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 99999999999998 68999999999874
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=371.63 Aligned_cols=251 Identities=27% Similarity=0.493 Sum_probs=217.2
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+|+.||||++.+.........+.+..|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999987654333445567788999998876799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 81 GDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeecccceecccCCccccc
Confidence 999888743 35789999999999999999999999999999999999998 478999999999875432 223345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..+......++ ..++.++.+||.+||
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L 231 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWLSKEAVSILKAFM 231 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHh
Confidence 679999999999865 468899999999999999999999999888888888877654332 347899999999999
Q ss_pred ccCccCCC-------CHHHHhcCcccccc
Q 008547 340 VKDPRARL-------TAAQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rp-------s~~~~l~hp~f~~~ 361 (562)
..||++|| ++.++++||||...
T Consensus 232 ~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 232 TKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred ccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 99999999 99999999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=370.37 Aligned_cols=256 Identities=26% Similarity=0.444 Sum_probs=221.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+..||+|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47899999999999999999999999999999876543333445667788899888867899999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-C
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-G 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~ 255 (562)
||+++|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .
T Consensus 81 E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEccCCCceecCCCC
Confidence 99999999988743 35689999999999999999999999999999999999998 578999999999875432 2
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..++.++.++
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 231 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAI 231 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcCCHHHHHH
Confidence 23345689999999998865 468999999999999999999999998888888888777654433 3588999999
Q ss_pred HHHcCccCccCCCCH-----HHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLTA-----AQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps~-----~~~l~hp~f~~~ 361 (562)
+.+||+.||.+|+++ .++++||||+..
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999999999999974 899999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-46 Score=375.66 Aligned_cols=259 Identities=29% Similarity=0.499 Sum_probs=222.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||+||+|.+..+|+.||+|++.............+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 689999999999999999999999999999999765443344566788999999998 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCCeECCCCC
Confidence 999999999987543 35799999999999999999999999999999999999998 57899999999998764433
Q ss_pred C--cccccCCCcccCchhcc-------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 257 K--FQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 257 ~--~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
. .....||+.|+|||++. ..++.++|||||||++|+|++|+.||........+..+.........+..+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV 236 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence 2 22347999999999875 23478899999999999999999999888877777777665433333334568
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++++.+||..||. +|.+||++.++++||||+..
T Consensus 237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 237 SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 9999999999998 99999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-45 Score=364.13 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=210.5
Q ss_pred ceeecceeeccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEE-----c
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE-----D 168 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~-----~ 168 (562)
+|++.+.||+|+||.||+|.+.. +|..||+|.+....... .....+.+|+.+++.+. +||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 69999999999999999999854 46889999886543222 23345667888887764 5999999999885 3
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+++||||+. ++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEccccc
Confidence 456899999996 5898888665556789999999999999999999999999999999999998 478899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC------
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR------ 321 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------ 321 (562)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....+.+..+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 987654444456679999999998854 4688999999999999999999999988777766666542211100
Q ss_pred -----------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 322 -----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 322 -----------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
...+.+++.+.+|+.+||+.||++|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-47 Score=402.80 Aligned_cols=259 Identities=29% Similarity=0.480 Sum_probs=230.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.|++.||+|+||.|.+++++.|++.||+|++.+-.+.......-|..|-.+|-.- +.+.|+.++..|+++.++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 4799999999999999999999999999999999886555555667788899999765 699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|...+ .+..++++..++.++..|+.||..||+.|+|||||||+||||+ ..||+||+|||.+-.+...
T Consensus 154 MdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCcEeeccchhHHhcCCC
Confidence 9999999999988 3445899999999999999999999999999999999999999 5899999999998776533
Q ss_pred -CC-cccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 256 -KK-FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 256 -~~-~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.. ....+|||.|++||++. +.|++.+|+||+||++|||++|.+||+..+..+++.+|+.....+..|....+
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~V 308 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDV 308 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccccc
Confidence 22 35679999999999983 45789999999999999999999999999999999999987555555455679
Q ss_pred CHHHHHHHHHcCccCccCCCC---HHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
|+++++||+++++ +|+.|.. +.++..||||.+.
T Consensus 309 SeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 309 SEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred CHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 9999999999998 7999998 9999999999974
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=371.16 Aligned_cols=251 Identities=25% Similarity=0.462 Sum_probs=210.3
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+.+||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999999999999999997654444445667889999999997799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-CCCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-~~~~~~~~ 260 (562)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++... ........
T Consensus 81 g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccccccccCCCcccc
Confidence 999887743 36799999999999999999999999999999999999998 4788999999998753 23334456
Q ss_pred ccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC---------hhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 261 IVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+......++ ..++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~ 231 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVK 231 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHH
Confidence 7899999999998764 5889999999999999999999995321 1123333443332222 357899
Q ss_pred HHHHHHHcCccCccCCCC------HHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARLT------AAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps------~~~~l~hp~f~~~ 361 (562)
+.++|.+||..||.+|++ +.++++||||...
T Consensus 232 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 232 ASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 999999999999999997 7899999999753
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=378.12 Aligned_cols=258 Identities=28% Similarity=0.500 Sum_probs=219.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.++..+ +||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999754433344567788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEeeccCCccccccc
Confidence 99999999998843 45789999999999999999999999999999999999998 47899999999986542210
Q ss_pred ------------------------------------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCC
Q 008547 257 ------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP 299 (562)
Q Consensus 257 ------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~p 299 (562)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0123579999999999865 468899999999999999999999
Q ss_pred CCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCC---CHHHHhcCcccccc
Q 008547 300 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 361 (562)
Q Consensus 300 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rp---s~~~~l~hp~f~~~ 361 (562)
|.+.+....+..+.........+....+++++.+||.+|+. ||.+|+ ++.++++||||+..
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 236 FCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 99888887777777544333333334578999999999874 999998 48999999999874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=369.41 Aligned_cols=254 Identities=27% Similarity=0.483 Sum_probs=216.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEcCCeEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~~~~~~lv 175 (562)
|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.++..+. +||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 678999999999999999999999999999997654333334566777877764332 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|||+++|+|...+. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCccCCCC
Confidence 99999999987763 35699999999999999999999999999999999999998 478999999999875432
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+......++ ..+++.+.+
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ 230 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAIS 230 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHH
Confidence 223345689999999998865 458899999999999999999999998888888877777654433 357899999
Q ss_pred HHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+|.+||..||.+|| ++.++++||||+..
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 99999999999999 79999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-45 Score=376.07 Aligned_cols=259 Identities=28% Similarity=0.475 Sum_probs=221.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++.+.+++.+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998754433334456678899999998 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 122 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcC
Confidence 999999999988743 3589999999999999999999999999999999999998 4789999999999865432
Q ss_pred C--CcccccCCCcccCchhcccC-----CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 K--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
. .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..+.........+..+.++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 275 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCC
Confidence 2 22356899999999998642 5789999999999999999999999888888888887655444444445789
Q ss_pred HHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
..+.+||..||..++.+ |+++.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 276 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 99999999999844433 7899999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=368.31 Aligned_cols=251 Identities=30% Similarity=0.523 Sum_probs=213.6
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+++.||||++...........+.+..|..++..+.+||||+++++++..++.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987654333344556677888887766799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 81 g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 81 GDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCCCCcccc
Confidence 999888743 35799999999999999999999999999999999999998 478899999999976432 223345
Q ss_pred ccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++ ..++.++.+||.+||
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l 231 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLF 231 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHc
Confidence 6899999999998654 58899999999999999999999998888777777765543332 357899999999999
Q ss_pred ccCccCCCCH-HHHhcCcccccc
Q 008547 340 VKDPRARLTA-AQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rps~-~~~l~hp~f~~~ 361 (562)
..||.+||++ .++++||||+..
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 232 ERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred cCCHHHcCCChHHHHcCcccCCC
Confidence 9999999986 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-45 Score=368.27 Aligned_cols=251 Identities=28% Similarity=0.501 Sum_probs=213.5
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.++.+|+.||+|++.+...........+..|..++..+.+||||+++++++.+.+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999987653322234556778888888766799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 81 g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 81 GDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCCCceec
Confidence 999988743 35789999999999999999999999999999999999998 478899999999875322 223345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+....+.++ ..++.++.+||.+||
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l 231 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLF 231 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHc
Confidence 689999999999865 468899999999999999999999998888777777765544332 247899999999999
Q ss_pred ccCccCCCCH-HHHhcCcccccc
Q 008547 340 VKDPRARLTA-AQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rps~-~~~l~hp~f~~~ 361 (562)
..||.+||++ .++++||||+..
T Consensus 232 ~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 232 ERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred cCCHHHcCCChHHHHcCCCcCCC
Confidence 9999999998 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=372.22 Aligned_cols=250 Identities=30% Similarity=0.538 Sum_probs=215.1
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765443344556778899999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCcc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~ 259 (562)
|+|...+. ....+++..+..++.||+.||.|||+ .||+||||||+|||++ .++.+||+|||++.... ......
T Consensus 80 ~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 80 GELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCCCeecCCCCcccc
Confidence 99988774 34578999999999999999999997 7999999999999998 57899999999987532 233334
Q ss_pred cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 260 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..+++++.+||.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~ 230 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGL 230 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHH
Confidence 5679999999999865 468899999999999999999999988887777776665544333 35789999999999
Q ss_pred CccCccCCC-----CHHHHhcCcccccc
Q 008547 339 LVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|..||++|+ ++.++++||||+..
T Consensus 231 L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 231 LKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred hhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 999999997 99999999999863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-45 Score=363.89 Aligned_cols=259 Identities=26% Similarity=0.408 Sum_probs=208.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+|+.||||++..... ......+.+|+.+++.+ +||||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999865432 12234567899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 82 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 82 FEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLARAKSVP 156 (303)
T ss_pred EECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcceeccCC
Confidence 99995 5888777543 35689999999999999999999999999999999999998 478899999999875432
Q ss_pred CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhC--CC------------
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN--KP------------ 317 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~--~~------------ 317 (562)
........+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... ..+..+... .+
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 223345678999999998854 3578899999999999999999999775432 222222111 00
Q ss_pred CCCCCC------------C--CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 DFRRKP------------W--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 ~~~~~~------------~--~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.... | ...++.+.+||.+||+.||++|||+.++|+||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 000000 0 12456789999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-45 Score=361.86 Aligned_cols=255 Identities=27% Similarity=0.451 Sum_probs=208.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEE
Confidence 69999999999999999999999999999999875432 223456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++++.+. .+. .....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 80 e~~~~~~l~-~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 80 EYVEKNMLE-LLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred ecCCCCHHH-HHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcccccccc
Confidence 999886554 333 2335689999999999999999999999999999999999998 57899999999998764322
Q ss_pred --CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC--------------CCC
Q 008547 257 --KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------------PDF 319 (562)
Q Consensus 257 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------------~~~ 319 (562)
......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+.... +.+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 2234578999999998865 45889999999999999999999998776544333322211 000
Q ss_pred CCC--------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 320 RRK--------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 320 ~~~--------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
... .+..++.++.+||.+||+.||++|||++++|+||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000 012367889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=367.31 Aligned_cols=251 Identities=29% Similarity=0.521 Sum_probs=216.3
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||+||+|.+..+++.||||++.+...........+.+|+.+++.+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654333345567788999998886799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~~ 260 (562)
|+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... .......
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCeecCcCCCcccc
Confidence 99988774 335799999999999999999999999999999999999998 47899999999987532 2223345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..++.++.+||.+||
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l 231 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFL 231 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHc
Confidence 679999999999865 458899999999999999999999988887777777766544332 357899999999999
Q ss_pred ccCccCCCCH-----HHHhcCcccccc
Q 008547 340 VKDPRARLTA-----AQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rps~-----~~~l~hp~f~~~ 361 (562)
..||.+||++ .+++.||||+..
T Consensus 232 ~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 232 TKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred cCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999 999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=370.49 Aligned_cols=256 Identities=27% Similarity=0.497 Sum_probs=212.1
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
+|.+.+.||+|+||.||++.+. .+|+.||+|++.+.... .....+.+..|+.+++.+.+||||+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999998764 47899999998654321 2234566789999999997799999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCccc
Confidence 999999999999998854 35689999999999999999999999999999999999998 4789999999999764
Q ss_pred CCCC--CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCCh----hhHHHHHHhCCCCCCCCCC
Q 008547 253 KPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 253 ~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~ 324 (562)
.... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||..... ......+....+. ..
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----~~ 231 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP----FP 231 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC----CC
Confidence 3322 23356899999999998753 57889999999999999999999964332 2333334333322 22
Q ss_pred CCCCHHHHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+.+++.+.++|.+||..||++|| ++.++++||||+..
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 232 SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 45889999999999999999999 88899999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=368.03 Aligned_cols=251 Identities=25% Similarity=0.463 Sum_probs=209.6
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998654444445667889999998886799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~~ 260 (562)
|+|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... .......
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 81 GDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeCCccccccCCCCcccc
Confidence 99988774 346799999999999999999999999999999999999998 47899999999987532 2333445
Q ss_pred ccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC---------hhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 261 IVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+......++ ..++..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~ 231 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVK 231 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHH
Confidence 6899999999998654 5889999999999999999999995211 1123333443333222 357899
Q ss_pred HHHHHHHcCccCccCCCC------HHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARLT------AAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps------~~~~l~hp~f~~~ 361 (562)
+.+||.+||..||.+||+ +.++++||||+..
T Consensus 232 ~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 232 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 999999999999999998 5799999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-45 Score=365.61 Aligned_cols=251 Identities=29% Similarity=0.503 Sum_probs=213.3
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||+||+|.+..+++.||||++................|..++..+.+||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999987653322234456677888888765799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCCceee
Confidence 999988743 35689999999999999999999999999999999999998 478899999999875322 223345
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+....+.++ ..++.++.+||.+||
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l 231 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLF 231 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHh
Confidence 679999999999865 468899999999999999999999988887777777665543322 247899999999999
Q ss_pred ccCccCCCCHH-HHhcCcccccc
Q 008547 340 VKDPRARLTAA-QALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rps~~-~~l~hp~f~~~ 361 (562)
..||.+||++. ++++||||+..
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 232 VREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred ccCHhhcCCChHHHHcCcccCCC
Confidence 99999999996 89999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-45 Score=381.78 Aligned_cols=259 Identities=23% Similarity=0.410 Sum_probs=209.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
...+|.+++.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.+ +||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeeccccc
Confidence 3457999999999999999999999999999999885432 2235799999999 599999999876432
Q ss_pred ----CeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 170 ----NYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 170 ----~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
..+++||||+++ +|...+.. .....+++..++.++.||+.||.|||++||+||||||+|||++. ..+.+||
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL 212 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKL 212 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceee
Confidence 257799999975 67666532 34467999999999999999999999999999999999999984 3457999
Q ss_pred eeccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC----
Q 008547 244 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---- 317 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~---- 317 (562)
+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+.....
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999987765555556789999999998765 468899999999999999999999988776655555433110
Q ss_pred --------C-----CCCC--------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 318 --------D-----FRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 318 --------~-----~~~~--------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
. ++.. .....++++.+||.+||.+||.+|||+.++|+||||+....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 0 0100 01136788999999999999999999999999999987543
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=368.13 Aligned_cols=264 Identities=34% Similarity=0.582 Sum_probs=237.9
Q ss_pred cccceee--cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 94 ~~~~y~i--~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+..-|+| .+.||+|.||+||-|.++.+|+.||||+|++...... ....+++|+.||+.+. ||.||.+--.|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~-HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLH-HPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcC-CCCeeEEEEeecCCce
Confidence 4455766 5689999999999999999999999999988765443 4588999999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++|||-+. |+.++.+.....+++++...+.++.||+.||.|||-++|+|+||||+||||.+.+.-..+||||||+|+.
T Consensus 638 vFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 638 VFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred EEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 999999994 5888888888889999999999999999999999999999999999999999877778999999999999
Q ss_pred cCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
+.........+|||.|+|||++..+ +...-|+||+|+|+|--++|..||. ..+++-.+|......++..+|..++++
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN--EdEdIndQIQNAaFMyPp~PW~eis~~ 794 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN--EDEDINDQIQNAAFMYPPNPWSEISPE 794 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC--CccchhHHhhccccccCCCchhhcCHH
Confidence 9877777788999999999999765 5667799999999999999999993 344566777788888999999999999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+.+||..+|+..-.+|.|.+..|.|||++++.
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 99999999999999999999999999999863
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=365.63 Aligned_cols=256 Identities=25% Similarity=0.444 Sum_probs=219.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+..|+.++..+.+||+|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 37788999999999999999999999999999876543333455677889999998876788999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++|+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeccccccccCCCC
Confidence 9999999998874 335799999999999999999999999999999999999998 4788999999998754322
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+......++ ..++.++.++
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 231 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSI 231 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHH
Confidence 223456799999999998654 58899999999999999999999998888888888777554433 3578999999
Q ss_pred HHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+.+||..+|.+|++ ..++++||||+..
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 232 CKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 99999999999997 5789999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=369.19 Aligned_cols=259 Identities=30% Similarity=0.474 Sum_probs=208.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC-----Ce
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD-----NY 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~-----~~ 171 (562)
+|++.+.||+|+||.||+|.+..+|..||||++..... .......+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 58999999999999999999999999999999864322 122345688999999999 599999999987543 35
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||+. ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 79 ~~lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 79 IYVVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN---ADCKLKICDFGLARV 152 (338)
T ss_pred EEEEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEccCccccc
Confidence 899999995 68888774 335699999999999999999999999999999999999998 578999999999975
Q ss_pred cCCCC----CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh----------
Q 008547 252 IKPGK----KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---------- 314 (562)
Q Consensus 252 ~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~---------- 314 (562)
..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+..
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 43211 1234679999999998754 568899999999999999999999977654332221110
Q ss_pred -----------------CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 315 -----------------NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 315 -----------------~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..+......++.+++.+.++|.+||..||++|||+.++|+||||+....
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000111123567889999999999999999999999999999987554
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=367.39 Aligned_cols=250 Identities=27% Similarity=0.481 Sum_probs=211.9
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~-l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
+.||+|+||+||+|.+..+|+.||||++.+...........+..|..+ ++.+ +||||+++++.+...+.+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 469999999999999999999999999876543333344556666654 4667 59999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCcc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQ 259 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~ 259 (562)
+|+|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .....
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 80 GGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCCcccccCCCccc
Confidence 9999888743 45789999999999999999999999999999999999998 578999999999875322 23334
Q ss_pred cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 260 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+....... .+.+++.+.++|.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~ 230 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL----KPNISVSARHLLEGL 230 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC----CCCCCHHHHHHHHHH
Confidence 5679999999998865 45889999999999999999999999888888887777654433 246789999999999
Q ss_pred CccCccCCCCH----HHHhcCcccccc
Q 008547 339 LVKDPRARLTA----AQALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rps~----~~~l~hp~f~~~ 361 (562)
|..||.+||++ .++++||||...
T Consensus 231 l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 231 LQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred hhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 99999999988 699999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=357.84 Aligned_cols=258 Identities=26% Similarity=0.454 Sum_probs=216.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.+++.+ +|++|+.+++.+.+.+.+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence 377888999999999999999999999999998765443344456678899999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCc
Confidence 999999999888655555799999999999999999999999999999999999998 47789999999997665444
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh---HHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....... ....+.... .......+++++.
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 233 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QEEYSEKFSPDAR 233 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hhhcCccCCHHHH
Confidence 4445689999999999865 46889999999999999999999997654321 222222211 1122346789999
Q ss_pred HHHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 333 DFVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+|+.+||+.||++||| +.++++||||+..
T Consensus 234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 9999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=357.37 Aligned_cols=254 Identities=27% Similarity=0.421 Sum_probs=208.1
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||+|+||+||+|.+..+|+.||+|++...........+.+..|+.+++.+ +||||+++++++.....+|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999999999999999998765433333446678899999999 59999999999999999999999999999
Q ss_pred hHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC-ccc
Q 008547 184 LLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQD 260 (562)
Q Consensus 184 L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~-~~~ 260 (562)
|...+.. .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++........ ...
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCCCccccc
Confidence 9877643 2345689999999999999999999999999999999999998 478899999999976544322 334
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
..||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+............+.+++.+.+++.+||
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 679999999999865 4588999999999999999999999765433222222221111111222458899999999999
Q ss_pred ccCccCCC-----CHHHHhcCcccccc
Q 008547 340 VKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 340 ~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+.||++|| +++++++||||+..
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 99999999 88999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=366.42 Aligned_cols=258 Identities=28% Similarity=0.476 Sum_probs=233.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe-EEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-VYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~-~~l 174 (562)
..|.+++.||+|+||.+++++++..++.||+|++.......+ ..+...+|+.+++++. |||||.+.+.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 469999999999999999999999999999999987765554 4457889999999995 9999999999998887 999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||+||+||+|.+.+...++..++++.+..|+.||+.|+.|||+++|+|||||+.||++. .+..|||+|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCC
Confidence 99999999999999888888899999999999999999999999999999999999999 477889999999999887
Q ss_pred CC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.. ...+.+|||.|++||++.+ .|+.++|||||||++|||++-+++|.+.+...+..++.+...... ....+.+++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl---p~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL---PSMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC---CccccHHHH
Confidence 76 5567899999999999977 579999999999999999999999999999999999988773222 245789999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+|..||..+|..||++.++|.+|.+..+
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 99999999999999999999999988754
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=364.41 Aligned_cols=260 Identities=27% Similarity=0.487 Sum_probs=217.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEE
Confidence 699999999999999999999999999999998764333334556688999999998 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCceeecCCCC
Confidence 99999999988743 245789999999999999999999999999999999999998 57899999999987654332
Q ss_pred Cc--ccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCC
Q 008547 257 KF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSI 327 (562)
Q Consensus 257 ~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 327 (562)
.. ...+||+.|+|||++.. .++.++|||||||++|+|++|+.||.+....+.+..+......+.. ..++.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence 22 23579999999999852 3577899999999999999999999888777777777654332221 223458
Q ss_pred CHHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
++.+++||.+||+.++.+ |+++.++++||||...
T Consensus 237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999999999999764444 7899999999999764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=357.44 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=209.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEc-----C
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFED-----D 169 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~-----~ 169 (562)
+|++.+.||+|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 588999999999999999999999999999988654321 112334567888877664 59999999998764 3
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
..+++||||+.+ +|.+++.......+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcc
Confidence 468999999975 888887655555689999999999999999999999999999999999998 4788999999999
Q ss_pred cccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC----------
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD---------- 318 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------- 318 (562)
.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+......+.++......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 87654444455678999999998854 4688999999999999999999999877766555554331100
Q ss_pred ------CC-------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 ------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ------~~-------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+. ....+.++..+.+||.+||+.||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 01124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=364.21 Aligned_cols=250 Identities=31% Similarity=0.556 Sum_probs=212.6
Q ss_pred ceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 102 KLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
+.||+|+||.||++.+. .+++.||+|++.+.... .......+.+|+.+++.+ +||||+++++++..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 67999999999999863 47889999998754321 123345678899999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~ 256 (562)
|+++++|.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.... ..
T Consensus 81 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 81 YLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEeeCcCCeecccCCC
Confidence 9999999988743 45788999999999999999999999999999999999998 478999999999875332 22
Q ss_pred CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......++ +.+++.+.+||
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li 231 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLL 231 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 33456899999999998654 58899999999999999999999988887777777776654332 45789999999
Q ss_pred HHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 336 KKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 336 ~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
.+||..||++|| ++.++++||||+..
T Consensus 232 ~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-44 Score=354.22 Aligned_cols=260 Identities=28% Similarity=0.452 Sum_probs=219.6
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|++.+.||.|+||+||+|.+..+|+.||+|.+.............+.+|+.+++.+ +|+||+.+++.+..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 67888999999999999999999999999998765433333455678899999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~ 257 (562)
|+++++|...+.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCCc
Confidence 99999998887655555799999999999999999999999999999999999998 467899999999876544444
Q ss_pred cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 258 FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 258 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
.....|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+.........+............+.++.++.+|+.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence 455689999999998854 4688999999999999999999999877665444444333222222333568899999999
Q ss_pred HcCccCccCCCC-----HHHHhcCcccccc
Q 008547 337 KLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 337 ~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+||..||++||+ +.+++.||||+..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-45 Score=368.23 Aligned_cols=250 Identities=28% Similarity=0.511 Sum_probs=212.5
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
||+|+||+||+|.+..+|+.||||++.+..............|..++..+. +||||+.+++++...+.+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987543333334445667777877664 699999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~~ 260 (562)
|+|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ......
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~~~~~ 155 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNKTTNT 155 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCCCccC
Confidence 99988874 346799999999999999999999999999999999999998 478899999999875432 233345
Q ss_pred ccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 261 IVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+..+...++. ..+++++.+||.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~ 232 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGL 232 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHH
Confidence 689999999999864 3588999999999999999999999988887777777666544432 34789999999999
Q ss_pred CccCccCCC----CHHHHhcCcccccc
Q 008547 339 LVKDPRARL----TAAQALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rp----s~~~~l~hp~f~~~ 361 (562)
|..||.+|| ++.++++||||+..
T Consensus 233 L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 999999998 79999999999863
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-44 Score=362.69 Aligned_cols=251 Identities=25% Similarity=0.438 Sum_probs=209.8
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+.+++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998654444445677889999999997799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-CCCCCccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 260 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-~~~~~~~~ 260 (562)
|+|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++... ........
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 81 GDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCCCceec
Confidence 99988774 335799999999999999999999999999999999999998 4788999999998753 22333456
Q ss_pred ccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC------h-hhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 261 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT------E-DGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... . ......+......+ ...++..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~ 231 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI----PRFLSVKAS 231 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC----CCCCCHHHH
Confidence 789999999999865 45889999999999999999999995422 1 22333333332222 235789999
Q ss_pred HHHHHcCccCccCCCC------HHHHhcCcccccc
Q 008547 333 DFVKKLLVKDPRARLT------AAQALSHPWVREG 361 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps------~~~~l~hp~f~~~ 361 (562)
++|.+||..||.+|++ +.++++||||+..
T Consensus 232 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 9999999999999998 5699999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=357.23 Aligned_cols=258 Identities=27% Similarity=0.476 Sum_probs=229.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|+.-++||+||||+||-++-+.||+-+|+|++.+............++|-.||.++ +.|+||.+-..|++.+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 3577788899999999999999999999999999877666666777889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+..|+||+|.-++.......++++.++.++.+|+.||++||+.+||+|||||+||||| +.|+|+|+|+|+|..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCCeEeeccceEEecCCC
Confidence 9999999999888777667899999999999999999999999999999999999999 6999999999999999888
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh----hHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
......+||.+|||||++.+ .|+...|+|||||+||||+.|+.||....+. ++-+.++.....++ ..+|++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~----~kFS~e 416 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS----DKFSEE 416 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc----cccCHH
Confidence 88888899999999999865 5788999999999999999999999765443 33344444443333 468999
Q ss_pred HHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+++|++.+|+.||++|. +++++.+||||+..
T Consensus 417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 99999999999999998 67799999999973
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=369.14 Aligned_cols=252 Identities=22% Similarity=0.387 Sum_probs=203.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.| +||||+++++++......++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEE
Confidence 479999999999999999999999999999996532 3467899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
+|++. ++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|.....
T Consensus 162 ~e~~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 162 LPRYK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCcccccccc
Confidence 99995 688887743 35689999999999999999999999999999999999998 478899999999975322
Q ss_pred -CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-------hhHHHHHHhC----------
Q 008547 255 -GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVLRN---------- 315 (562)
Q Consensus 255 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~~~~~---------- 315 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+..+...
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 122345689999999998865 468899999999999999999988754321 1111111110
Q ss_pred ----------------CCC--CCCCCC---CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 316 ----------------KPD--FRRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 316 ----------------~~~--~~~~~~---~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
... ...+.| ..++.++.+||.+||++||.+|||+.++|+||||+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 000 001111 135678999999999999999999999999999987543
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=364.07 Aligned_cols=250 Identities=26% Similarity=0.475 Sum_probs=211.7
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~-l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
+.||+|+||+||+|.+..+|+.||+|++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 469999999999999999999999999876533333344566667665 5556 69999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCcc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQ 259 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~ 259 (562)
+|+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .....
T Consensus 80 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 80 GGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCcccCCCCCCCcc
Confidence 999988774 346799999999999999999999999999999999999998 578999999999875322 23334
Q ss_pred cccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 260 DIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..+||+.|+|||++.+. ++.++|||||||++|+|++|..||...+..+.+..+........ +.++..+.++|.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~l 230 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEEL 230 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHH
Confidence 56899999999998654 58899999999999999999999998888888887776544332 46889999999999
Q ss_pred CccCccCCCCH----HHHhcCcccccc
Q 008547 339 LVKDPRARLTA----AQALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rps~----~~~l~hp~f~~~ 361 (562)
|..+|.+||++ .+++.||||+..
T Consensus 231 l~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 231 LEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred hccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 99999999977 589999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=359.61 Aligned_cols=258 Identities=26% Similarity=0.371 Sum_probs=213.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||++.+..+|..||+|.+.... .+.....+.+|+.+++.+ +||||+++++++..++.+++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999987542 234567799999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCcccccccc
Confidence 999999999998843 35689999999999999999999986 699999999999998 478899999999876543
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC-----------------
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK----------------- 316 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~----------------- 316 (562)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+....
T Consensus 157 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 157 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred c-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccc
Confidence 2 2345679999999999875 46889999999999999999999997655433322111000
Q ss_pred ---------------------------CCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 ---------------------------PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 ---------------------------~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...+..+...+++++.+||.+||.+||++|||+.++++||||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0000011123678999999999999999999999999999998643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=352.27 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=208.6
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||+|+||.||++.++.+|+.||+|.+.............+..|+.+++.+ +||||+++++++..+..+|+||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999998754332223344566799999999 59999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccC
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~g 263 (562)
|...+.......+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCceeeccCC
Confidence 98887655555689999999999999999999999999999999999998 478899999999987655444445679
Q ss_pred CCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh----hHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 264 SAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 264 t~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
|+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .+..........+ ....+++++.+||.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHH
Confidence 999999998755 4688999999999999999999999765332 2223333222211 2245789999999999
Q ss_pred CccCccCCCCH----HHHhcCcccccc
Q 008547 339 LVKDPRARLTA----AQALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rps~----~~~l~hp~f~~~ 361 (562)
|..||++||++ .+++.||||+..
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcCC
Confidence 99999999999 678899999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-44 Score=361.13 Aligned_cols=260 Identities=27% Similarity=0.458 Sum_probs=218.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||++.++.+++.||+|++.+...........+..|+.++..+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 689999999999999999999999999999998654333333455688899999998 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchheecccCC
Confidence 999999999988542 35689999999999999999999999999999999999998 57899999999987653322
Q ss_pred C--cccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCC
Q 008547 257 K--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSI 327 (562)
Q Consensus 257 ~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 327 (562)
. ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||...+..+.+..+......+.. ..+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV 236 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence 2 23457999999999875 24578999999999999999999999988887888777665433322 123468
Q ss_pred CHHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
++++.+||.+||+.++.+ |+++.++++||||+..
T Consensus 237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 999999999999765554 6899999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=366.17 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=208.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+++.||.|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEE
Confidence 46888999999999999999999999999999986543 233557789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|... ...++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+...
T Consensus 151 ~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 151 LEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceecccc
Confidence 999999998542 2356788889999999999999999999999999999998 5789999999999875432
Q ss_pred C-CcccccCCCcccCchhcccC------CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~------~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
. .....+||..|+|||++... .+.++|||||||++|+|++|+.||...........+..............++
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATAS 301 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccC
Confidence 2 22456799999999987431 2468999999999999999999997443322222211111111222234678
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++.+||.+||..||++||++.++|+||||....
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 9999999999999999999999999999999864
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=361.19 Aligned_cols=250 Identities=27% Similarity=0.468 Sum_probs=210.0
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHH-HHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 46999999999999999999999999987643322223345555554 45667 69999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCcc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~ 259 (562)
+|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ......
T Consensus 80 ~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 80 GGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCCCcc
Confidence 9999988743 45688999999999999999999999999999999999998 47899999999987532 223344
Q ss_pred cccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 260 DIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+......+ .+.+++.+.++|.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~ 230 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGL 230 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHH
Confidence 56899999999988664 5889999999999999999999999888888777776654332 356899999999999
Q ss_pred CccCccCCCCHH----HHhcCcccccc
Q 008547 339 LVKDPRARLTAA----QALSHPWVREG 361 (562)
Q Consensus 339 l~~dP~~Rps~~----~~l~hp~f~~~ 361 (562)
|+.||.+||++. ++++|+||...
T Consensus 231 l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 231 LQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred cccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 999999999876 89999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=360.03 Aligned_cols=260 Identities=27% Similarity=0.463 Sum_probs=217.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..+ +||||+.+++++.+.+..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 699999999999999999999999999999998754333333455678899999998 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccceeeccCCC
Confidence 999999999988543 35789999999999999999999999999999999999998 47889999999997654332
Q ss_pred Cc--ccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCC
Q 008547 257 KF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSI 327 (562)
Q Consensus 257 ~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 327 (562)
.. ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+.+..+......+.. ..+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV 236 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence 22 23579999999998863 4578999999999999999999999888777777777654433221 223467
Q ss_pred CHHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
++++.++|.+||+.++.+ |+++.++++||||+..
T Consensus 237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 899999999999976654 5689999999999853
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=357.27 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=212.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++ +|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 83 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 83 FEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSVP 157 (309)
T ss_pred EeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceecCCC
Confidence 999975 888776433 34588999999999999999999999999999999999998 4788999999998754322
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC--------------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-------------- 318 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------- 318 (562)
.......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 22334578999999998754 3588999999999999999999999887665554444321110
Q ss_pred -----CCC-------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 319 -----FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 319 -----~~~-------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++. ...+.+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 000 11235788999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-44 Score=359.21 Aligned_cols=249 Identities=27% Similarity=0.474 Sum_probs=209.6
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHH-HHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.+ +||||+++++++.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333334455666665 56677 59999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-CCCCcc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~~~~~~ 259 (562)
+|+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ......
T Consensus 80 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 80 GGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCCccCCCCCCccc
Confidence 999988774 345789999999999999999999999999999999999998 47899999999987532 223334
Q ss_pred cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 260 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......++ +..+..+.++|.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~ 230 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGL 230 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHH
Confidence 5689999999999865 458899999999999999999999998887777777766543322 35788999999999
Q ss_pred CccCccCCCCH----HHHhcCccccc
Q 008547 339 LVKDPRARLTA----AQALSHPWVRE 360 (562)
Q Consensus 339 l~~dP~~Rps~----~~~l~hp~f~~ 360 (562)
|..||.+||++ .++++||||..
T Consensus 231 l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 231 LHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred ccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 99999999976 49999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=360.68 Aligned_cols=249 Identities=29% Similarity=0.515 Sum_probs=212.8
Q ss_pred ceeeccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 102 KLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+.||+|+||.||++.+ ..+|+.||+|++.+.... ......+.+|+.+++++ +||||+++++++.+++.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999876 357899999998764321 22345677899999999 599999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-CC
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KK 257 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~-~~ 257 (562)
+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...... ..
T Consensus 80 ~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 80 LRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccCCCCCc
Confidence 999999988843 45789999999999999999999999999999999999998 4788999999998765433 23
Q ss_pred cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 258 FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 258 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+......++ +.+++.+.+||.
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 230 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLR 230 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345689999999999865 458899999999999999999999988887777777766554332 357899999999
Q ss_pred HcCccCccCCCC-----HHHHhcCcccccc
Q 008547 337 KLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 337 ~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+||+.||.+||+ +.+++.||||+..
T Consensus 231 ~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 231 ALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred HHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 999999999999 7779999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=363.15 Aligned_cols=257 Identities=35% Similarity=0.601 Sum_probs=234.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|.+.+.||+|.|++|.+|.+..||..||||.+++...... ..+.+.+|+++|+.| +|||||+++.+......+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEE
Confidence 3469999999999999999999999999999999988776544 455689999999999 69999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+.+|.+++++. +.+.+.+..++.++.|+++|++|||+++|||||||++||||+ .+.++||+|||++.++..
T Consensus 133 V~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 133 VMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccceeeeccccceeecc
Confidence 999999999999994 447788899999999999999999999999999999999999 577899999999999998
Q ss_pred CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
+....+.||++.|.|||++.+.. ++++|+||+|++||-|+.|..||.+.+..+....++.+....+. .++-++.
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce 283 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCE 283 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhH
Confidence 88889999999999999998753 89999999999999999999999999988888888887755543 4788999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++|+++|..+|.+|++.++++.|.|.....
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 999999999999999999999999987644
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=355.58 Aligned_cols=257 Identities=28% Similarity=0.492 Sum_probs=204.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+.|+++++||+||.++||++.. ...+.||+|++.... .+.+....+.+|+.+|.+|++|.+||+||+|-..++.+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 35799999999999999999974 444567777664433 3456788999999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||=+ .+|...|. +....++.-.++.++.||+.|+.++|.+||||.||||.|+|+. .|.+||+|||.|..+.+
T Consensus 438 vmE~Gd-~DL~kiL~-k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 438 VMECGD-IDLNKILK-KKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQP 511 (677)
T ss_pred Eeeccc-ccHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCc
Confidence 999963 47776664 3334455458899999999999999999999999999999997 68999999999998876
Q ss_pred CCCc---ccccCCCcccCchhccc------------CCCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCCC
Q 008547 255 GKKF---QDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPD 318 (562)
Q Consensus 255 ~~~~---~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~ 318 (562)
.... ...+||+.||+||.+.. ..++++||||||||||+|+.|++||.... ....+..+.....+
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHE 591 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcc
Confidence 5432 45799999999998731 13678999999999999999999995543 22223333332232
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
...+..+. ..++.++++.||.+||.+||++.++|+|||++.
T Consensus 592 Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 592 IEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred ccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 22222221 234999999999999999999999999999875
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-45 Score=360.61 Aligned_cols=262 Identities=27% Similarity=0.461 Sum_probs=227.8
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
+.++....|.-++.||.|+||.||-|++..+.+.||||++...........+.+..|+.+|++|. |||++.+-|+|..+
T Consensus 20 ~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre 98 (948)
T KOG0577|consen 20 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLRE 98 (948)
T ss_pred ccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeecc
Confidence 44555567888999999999999999999999999999998766555566788999999999995 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
...|+|||||-| +-.+.+ ....+++-+-.+..|..+.+.||.|||+.+.||||||..||||. +.|.|||+|||.|
T Consensus 99 ~TaWLVMEYClG-SAsDll-eVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSA 173 (948)
T KOG0577|consen 99 HTAWLVMEYCLG-SASDLL-EVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSA 173 (948)
T ss_pred chHHHHHHHHhc-cHHHHH-HHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccch
Confidence 999999999965 655544 34447899999999999999999999999999999999999998 6899999999999
Q ss_pred cccCCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
....+. .+++|||.|||||++. |.|+-++|||||||+..||...++|+..++....+..|..+...... -+
T Consensus 174 si~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--s~ 248 (948)
T KOG0577|consen 174 SIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--SN 248 (948)
T ss_pred hhcCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC--Cc
Confidence 876554 4569999999999873 67889999999999999999999999999888887777776543322 24
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+..++.|+..||..-|.+|||.+++|.|+|+.-..
T Consensus 249 eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 249 EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 5688999999999999999999999999999987543
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=383.50 Aligned_cols=268 Identities=28% Similarity=0.474 Sum_probs=220.1
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~- 168 (562)
..+.+..+|.+++.||.|+||+||+|.+..++..||+|++..... .......+..|+.+++.|. |||||+++++|..
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de 84 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNK 84 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEec
Confidence 344555789999999999999999999999999999999875543 2335677899999999995 9999999998854
Q ss_pred -CCeEEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-------CceeccCCCCceEeccC---
Q 008547 169 -DNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH-------GLVHRDMKPENFLFKSA--- 235 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-------~iiHrDlkp~NIll~~~--- 235 (562)
...+||||||+++|+|..++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+..
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 46799999999999999888542 235799999999999999999999985 49999999999999641
Q ss_pred -----------CCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCC
Q 008547 236 -----------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFW 301 (562)
Q Consensus 236 -----------~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~ 301 (562)
+....+||+|||++............+||+.|+|||++.+ .++.++||||||||||+|++|..||.
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 1245699999999987654444456689999999998853 35789999999999999999999997
Q ss_pred CCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 302 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.......+...+...+.+ +.+..+.++.+||..||..+|.+||++.++|.||||+...
T Consensus 245 ~~~~~~qli~~lk~~p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 245 KANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred cCCcHHHHHHHHhcCCCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 765544444444433322 2345789999999999999999999999999999998654
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=361.98 Aligned_cols=259 Identities=30% Similarity=0.478 Sum_probs=208.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence 44689999999999999999999999999999999865432 233456788999999999 5999999999986543
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+|+||||+.+ +|...+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg 168 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 168 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEecCC
Confidence 57999999965 6666552 3478999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh------------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------------ 314 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------ 314 (562)
++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 169 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 169 LARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred CccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 9986554444456688999999999865 468899999999999999999999987654333222211
Q ss_pred ----------CCCCCCCCC-------C---------CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 315 ----------NKPDFRRKP-------W---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 315 ----------~~~~~~~~~-------~---------~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+.+.... | ...++.+.+||.+||..||++|||+.++|+||||+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 322 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY 322 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence 111111000 0 12357789999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=371.99 Aligned_cols=260 Identities=25% Similarity=0.333 Sum_probs=202.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-----CCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~l~~~~~~~ 169 (562)
..+|++.+.||+|+||+||+|.+..+++.||||++.... .....+..|+.+++.+. +|++|+.+++++...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 468999999999999999999999999999999986432 23345667888887774 245688999988754
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCC-----------
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAK----------- 236 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~----------- 236 (562)
..+|+||+++ |++|.+++.. .+.+++..+..++.||+.||.|||+ .|||||||||+|||++..+
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 5789999998 7789888753 3579999999999999999999998 5999999999999998422
Q ss_pred --CCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 008547 237 --EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 237 --~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 313 (562)
+...+||+|||++.... ......+||+.|+|||++.+ .++.++|||||||++|||++|++||.+....+.+..+.
T Consensus 281 ~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred CCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 12259999999886432 22345689999999999866 46889999999999999999999998776554443332
Q ss_pred hCCCCCCC-----------------------C-------------CCC--CCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 314 RNKPDFRR-----------------------K-------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 314 ~~~~~~~~-----------------------~-------------~~~--~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.....++. . .+. ..++.+.+||.+||++||.+|||+.++|+|
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 21110000 0 000 013457899999999999999999999999
Q ss_pred ccccccCC
Q 008547 356 PWVREGGD 363 (562)
Q Consensus 356 p~f~~~~~ 363 (562)
|||+....
T Consensus 439 p~~~~~~~ 446 (467)
T PTZ00284 439 PYVLKYYP 446 (467)
T ss_pred ccccccCC
Confidence 99998654
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=370.32 Aligned_cols=256 Identities=28% Similarity=0.457 Sum_probs=218.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.+ +|||||++++++..++.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEE
Confidence 3599999999999999999998877 7889999764432 33456778899999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 175 AMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||||++||+|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceec
Confidence 99999999999877432 345689999999999999999999999999999999999998 4789999999999865
Q ss_pred CCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
..... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+++..+..+.... ....++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~s 296 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---FPCPVS 296 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---CCccCC
Confidence 43322 3456799999999988654 6889999999999999999999998888877777777654321 123578
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+++.+||.+||..||++||++.+++.|||++..
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 999999999999999999999999999999753
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=370.90 Aligned_cols=260 Identities=27% Similarity=0.454 Sum_probs=220.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
...+|.+.+.||+|+||+||+|.+..+|+.||||++..... .......+.+|+.++..+ +|+||+++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccC
Confidence 44689999999999999999999999999999999876543 234566788999999999 5999999988765322
Q ss_pred -----eEEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 171 -----YVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 171 -----~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
.+++||||+++|+|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEE
Confidence 378999999999999988543 235689999999999999999999999999999999999998 4789999
Q ss_pred eeccCccccCCC---CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 244 TDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 244 ~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
+|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+..+....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999765432 22345689999999999875 46889999999999999999999998888777777776654321
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
..+.+++++.+++.+||..||.+||++.++++|||++..
T Consensus 265 ---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 265 ---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 235688999999999999999999999999999998864
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=357.02 Aligned_cols=258 Identities=28% Similarity=0.418 Sum_probs=210.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence 34689999999999999999999999999999999875432 223456778999999999 599999999987643
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+|+||||+++ +|...+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG 171 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 171 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCC
Confidence 357999999965 6776663 2478999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--------- 317 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------- 317 (562)
+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..++....
T Consensus 172 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 172 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred CccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 9987655444456689999999999865 458899999999999999999999988776655555433111
Q ss_pred -------------CCCCC----------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 318 -------------DFRRK----------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 318 -------------~~~~~----------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+... .....+..+++||.+||..||.+|||+.++|+||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00000 001134678999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=339.80 Aligned_cols=261 Identities=25% Similarity=0.466 Sum_probs=221.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+...+.|.++.+||.|+||.||++.++.+|..+|||.+.... ..+++..|+.|+++. ..|++|++||.|-....
T Consensus 29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sD 102 (502)
T KOG0574|consen 29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSD 102 (502)
T ss_pred CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHc-CCchhhhhhhhhccCCc
Confidence 334457999999999999999999999999999999987654 678899999999999 59999999999998999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|||||||..|+..+.+.. +..++++..+..+++..+.||+|||...-||||||..||||+ .+|+.||+|||.|..
T Consensus 103 LWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN---T~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN---TDGIAKLADFGVAGQ 178 (502)
T ss_pred eEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc---ccchhhhhhccccch
Confidence 9999999999999887654 457899999999999999999999999999999999999998 589999999999976
Q ss_pred cCCC-CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 252 IKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 252 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
+... ....+..|||.|||||++.. +|..++||||||++..||..|++||.+--....+..+-...+.... .....+.
T Consensus 179 LTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~-KPE~WS~ 257 (502)
T KOG0574|consen 179 LTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFK-KPEEWSS 257 (502)
T ss_pred hhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCC-ChHhhhh
Confidence 5432 23357799999999999876 6789999999999999999999999776554333333222221111 1134678
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
++.+|++.||...|++|-|+.++++|||+++...
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 8999999999999999999999999999998754
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=352.25 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=210.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||.|+||.||+|.+..+|..+|+|.+.... .......+.+|+.+++.+ +||||++++++|.+.+.+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEE
Confidence 357999999999999999999999999999999886542 233556789999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 81 CMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLI 155 (333)
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhh
Confidence 9999999999998843 35689999999999999999999975 799999999999998 47789999999987653
Q ss_pred CCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHH--------------------
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-------------------- 312 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-------------------- 312 (562)
.. ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 156 DS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred hh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 22 22345789999999998754 588899999999999999999999755433221111
Q ss_pred ------------------------HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 313 ------------------------LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 313 ------------------------~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..... +......++.++.+||.+||+.||++|||+.+++.||||+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 00000 0000112568899999999999999999999999999998643
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-43 Score=359.98 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=210.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----e
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-----~ 171 (562)
.|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccce
Confidence 3788999999999999999999999999999886432 22234567889999999995 999999999998776 8
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+|+||+. ++|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 79 ~~lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLARV 152 (372)
T ss_pred EEEEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCCCEEeccccceee
Confidence 999999996 57877763 345799999999999999999999999999999999999998 578999999999976
Q ss_pred cCCCC--CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC------------
Q 008547 252 IKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN------------ 315 (562)
Q Consensus 252 ~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~------------ 315 (562)
..... ......+|+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 54322 23345789999999998653 588999999999999999999999877665544433221
Q ss_pred -----------CCCCCC-----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 316 -----------KPDFRR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 316 -----------~~~~~~-----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
....+. ...+..++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 100000 11234678999999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=345.80 Aligned_cols=254 Identities=40% Similarity=0.692 Sum_probs=210.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|++++.||+|+||+||++.+..+++.||+|++....... .......+|+.+++++ +||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 789999999999999999999999999999997764322 2223345699999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-CCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-~~~~ 256 (562)
|+.+++|.+++. ....+++..+..++.||+.||.+||++||+|+||||+||+++ .++.++|+|||.+... ....
T Consensus 79 ~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 79 YCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp EETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccc--cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccc
Confidence 999999998885 346789999999999999999999999999999999999998 5789999999999763 3334
Q ss_pred CcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhCCCCCCCCC---hhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 257 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
......+|+.|+|||++. ...+.++||||||+++|+|++|..||.... ...................+...+..+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHH
Confidence 455678899999999987 455899999999999999999999998773 233333333221111111111234789
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.++|.+||+.||++||++.++++||||
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=361.75 Aligned_cols=260 Identities=31% Similarity=0.486 Sum_probs=223.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+.|.|+..||.|+||+||+|.++.++-..|.|+|.... ....+.++-||+||... +||+||+|++.|..++.+||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWI 106 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEE
Confidence 345789999999999999999999999889999986543 45778899999999998 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 253 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~- 253 (562)
+.|||.||-....+. .-+..|++.++..+++|+|.||.|||+++|||||||..|||+. -+|.|+|+|||.+....
T Consensus 107 liEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchh
Confidence 999999998766554 4457899999999999999999999999999999999999999 48899999999875432
Q ss_pred CCCCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 254 PGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
......+++|||+|||||++. ..|..++|||||||+|.||..+.+|-...+...++.++.+..+.....+ ...
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-S~W 261 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-SHW 261 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc-chh
Confidence 222345689999999999863 3568899999999999999999999988888888888877665432222 346
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+..+.+||.+||..||..||++.++|+||||+....
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 788999999999999999999999999999997643
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-43 Score=356.81 Aligned_cols=259 Identities=27% Similarity=0.438 Sum_probs=208.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence 44689999999999999999999999999999999865432 233456778999999999 599999999988643
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+|+||||+++ +|...+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~Dfg 164 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 164 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEeeCc
Confidence 357999999965 6666552 3488999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC-----------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN----------- 315 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----------- 315 (562)
+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+...
T Consensus 165 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred ccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9987655444556789999999999865 4588999999999999999999999876654433322211
Q ss_pred -----------CCCCCC----------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 316 -----------KPDFRR----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 316 -----------~~~~~~----------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+.. ......+.++.+||.+||..||++|||+.++|+||||....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 111000 00112356789999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=347.21 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=212.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++..++.+++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+. ++|.+.+... ...+++..+..++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++......
T Consensus 83 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 83 FEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIP 157 (301)
T ss_pred Eeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhccCCC
Confidence 99997 5888877543 35689999999999999999999999999999999999998 4788999999998754322
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC-------------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------------- 319 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------- 319 (562)
.......+++.|+|||++.+ .++.++|||||||++|+|++|++||...+..+....+.......
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 22234567899999998765 35788999999999999999999998776655444333211100
Q ss_pred ------C-------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 ------R-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 ------~-------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+ ....+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 001235788999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=341.46 Aligned_cols=256 Identities=28% Similarity=0.501 Sum_probs=212.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----- 168 (562)
..+.|.+.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+.+||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 4567999999999999999999999999999999986543 2345688999999998679999999999874
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...+|+||||+.+++|.+.+.......+++..+..++.|++.||.|||+++|+||||||+||+++ +++.++|+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCC
Confidence 34689999999999999988665556789999999999999999999999999999999999998 57889999999
Q ss_pred CccccCCC-CCcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~ 234 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--AP 234 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--CC
Confidence 98765432 22334678999999998742 35778999999999999999999997665544443333221 22
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
......++.++.+||.+||..+|.+|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 22234578899999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=343.33 Aligned_cols=253 Identities=33% Similarity=0.572 Sum_probs=220.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++++. ||||+++++++..++.+|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 6899999999999999999999999999999987654444445677899999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCccccCCC-
Confidence 999999999888443 6799999999999999999999999999999999999998 4788999999999876543
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
....++++.|+|||.+.+ ..+.++||||||+++|+|++|..||...........+..+...++ ..++..+.++|
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li 229 (290)
T cd05580 155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLI 229 (290)
T ss_pred -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHH
Confidence 334578999999998754 457889999999999999999999988776666666665443332 35689999999
Q ss_pred HHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 336 KKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 336 ~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
.+||..||.+|+ ++.++++||||+..
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 230 RNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 999999999999 99999999999764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=357.18 Aligned_cols=259 Identities=29% Similarity=0.482 Sum_probs=209.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||.|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence 34579999999999999999999999999999999865432 223445677999999999 499999999887533
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...|++++++ +++|...+. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg 163 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFG 163 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCCc
Confidence 4578999998 778877652 35699999999999999999999999999999999999998 57889999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------- 316 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------- 316 (562)
++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+....
T Consensus 164 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 164 LARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred cceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9986543 2345689999999999865 35889999999999999999999998766544443332211
Q ss_pred --------------CCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 317 --------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 317 --------------~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+..+.. .+...++.+.+||.+||..||.+|||+.++|+||||.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 000100 11245677899999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=347.20 Aligned_cols=259 Identities=34% Similarity=0.590 Sum_probs=221.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+++.||+|.+.............+..|+.+++.+. ||||+++++.+......|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 6899999999999999999999999999999997765443345667899999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+.+++|.+.+.......+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhcccccc
Confidence 999999999988655556799999999999999999999999999999999999998 47889999999986543211
Q ss_pred ------------------------------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 257 ------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 257 ------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
......||..|+|||++.+. .+.++||||||+++|+|++|..||.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 11134688999999988654 58899999999999999999999988887
Q ss_pred hhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC----HHHHhcCcccccc
Q 008547 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQALSHPWVREG 361 (562)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps----~~~~l~hp~f~~~ 361 (562)
...+..+......++. ...++..+.++|.+||..||++||+ +.++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 238 DETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 7777766654433332 2237899999999999999999999 9999999999874
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=350.04 Aligned_cols=251 Identities=28% Similarity=0.427 Sum_probs=193.1
Q ss_pred cceeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeEEEEE
Q 008547 101 GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAM 176 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~~lv~ 176 (562)
+++||+|+||.||+|.++ .+++.||+|.+.... ....+.+|+.+++.+ +||||+++++++.. +..+|+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 467999999999999865 467899999986543 234567899999999 59999999998854 56789999
Q ss_pred eccCCCChHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC-CCCCCeEEeeccC
Q 008547 177 ELCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGL 248 (562)
Q Consensus 177 e~~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~-~~~~~vkl~DfG~ 248 (562)
||+. ++|...+... ....+++..++.++.||+.||.|||++||+||||||+|||+... ...+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9985 5887776422 12358999999999999999999999999999999999999532 2467899999999
Q ss_pred ccccCCCC----CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---------hHHHHHH
Q 008547 249 SDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GIFKEVL 313 (562)
Q Consensus 249 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~ 313 (562)
|....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 97654321 2345678999999998865 3588999999999999999999999643321 1111111
Q ss_pred hCCCC---------------------CCC-------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 314 RNKPD---------------------FRR-------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 314 ~~~~~---------------------~~~-------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
..... +.. ......+..+.+||.+||++||.+|||++++|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 10000 000 0001234578899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=351.79 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=202.2
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC-
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD- 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~- 169 (562)
++|++.+.||.|+||.||+|.+ ..++..||+|++.... .......+.+|+.++..+.+||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4799999999999999999975 2445789999986432 2234567899999999996699999999988754
Q ss_pred CeEEEEEeccCCCChHHHHHhhc---------------------------------------------------------
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------------------------------------------------------- 192 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 192 (562)
+.+++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46899999999999998885421
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCc
Q 008547 193 ---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY 266 (562)
Q Consensus 193 ---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~ 266 (562)
...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....... .....+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 13477888999999999999999999999999999999998 478899999999976533221 123345678
Q ss_pred ccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCcc
Q 008547 267 YVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344 (562)
Q Consensus 267 y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~ 344 (562)
|+|||++.+ .++.++|||||||++|||++ |..||.+......+........... ....+++++.+|+.+||..||.
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR--APENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHccCChh
Confidence 999998755 46899999999999999997 9999987665444444433322222 2245788999999999999999
Q ss_pred CCCCHHHHhc
Q 008547 345 ARLTAAQALS 354 (562)
Q Consensus 345 ~Rps~~~~l~ 354 (562)
+|||+.++++
T Consensus 320 ~RPs~~el~~ 329 (338)
T cd05102 320 ERPTFSALVE 329 (338)
T ss_pred hCcCHHHHHH
Confidence 9999999974
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=335.82 Aligned_cols=255 Identities=28% Similarity=0.475 Sum_probs=212.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.|.+.+.||.|++|.||+|.+..+|+.||+|.+...... .......+.+|+.+++++ +||||+++++++..+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence 3588999999999999999999999999999988654321 122346788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++....
T Consensus 81 ~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecc
Confidence 99999999999988743 35689999999999999999999999999999999999998 47889999999987653
Q ss_pred CCCCc----ccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 254 PGKKF----QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 254 ~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
..... ....++..|+|||++.+. .+.++||||||+++|+|++|+.||...........+...... ......++
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PQLPSHVS 233 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC--CCCCccCC
Confidence 32111 235688899999998664 588999999999999999999999776555554444433222 11224578
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
..+.++|.+||..+|.+||++.++++||||
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 234 PDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 999999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=340.93 Aligned_cols=256 Identities=26% Similarity=0.415 Sum_probs=207.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.+ +||||+++++++.+++.+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEE
Confidence 488999999999999999999999999999998654321 22346678999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||++ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCC
Confidence 9997 58888774433 35689999999999999999999999999999999999998 4788999999998755332
Q ss_pred C-CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC-------------
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------------- 319 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------- 319 (562)
. ......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.........+.......
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 2 22334678999999987643 4788999999999999999999998765543333222111000
Q ss_pred ------------CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 320 ------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 320 ------------~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
....+..+++++.++|.+||..||.+|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 001123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=347.21 Aligned_cols=257 Identities=22% Similarity=0.318 Sum_probs=205.6
Q ss_pred ecceeecc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 100 IGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 100 i~~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
++++||+| +||+||++.++.+|+.||+|++...... ......+.+|+.+++.+ +||||+++++++..++..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 56789999 7899999999999999999998755332 23456788899999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~ 256 (562)
|+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.++++|||.+..... +.
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhccccccc
Confidence 99999999988655455689999999999999999999999999999999999998 467899999986543211 11
Q ss_pred -------CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC------
Q 008547 257 -------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR------ 320 (562)
Q Consensus 257 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------ 320 (562)
......++..|+|||++.+ .++.++|||||||++|+|++|+.||....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112356778999999864 368899999999999999999999976554443333222111000
Q ss_pred ------------------------------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 321 ------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 321 ------------------------------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+....+++.+.+||.+||+.||++|||+.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 00011356789999999999999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=333.96 Aligned_cols=256 Identities=29% Similarity=0.500 Sum_probs=217.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||+||+|.+..++..+|+|++...... .....+.+|+.+++.+ +||||+++++.+...+..++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEE
Confidence 689999999999999999998889999999998654432 2567789999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|++++++|.+.+..... ..+++..+..++.||+.||.|||+.||+||||+|+||+++ +++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHHHhccC
Confidence 99999999998855432 5689999999999999999999999999999999999998 4688999999998765443
Q ss_pred CCc-----ccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC--CCCC
Q 008547 256 KKF-----QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK--PWPS 326 (562)
Q Consensus 256 ~~~-----~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~ 326 (562)
... ....|+..|+|||++... .+.++|+||||+++|+|++|+.||........+............. .+..
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKK 235 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccc
Confidence 221 345689999999987654 6889999999999999999999998777666666655543221111 1246
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+++.+.+++.+||..||++||++.++++||||
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 78999999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=316.25 Aligned_cols=259 Identities=25% Similarity=0.395 Sum_probs=221.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
..+++..||.|+.|.||+++.+.+|...|||.+.+... ......++..+.++..-.+.|+||+.+|+|..+..+++.|
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 34567789999999999999999999999999987643 4466778888888877656899999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|.|.. -.+.|...-.+++++..+-.+..-++.||.||.+ +||||||+||+|||++ +.|++||||||.+..+-.+
T Consensus 171 elMs~--C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 171 ELMST--CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHH--HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCCEEeecccccceeecc
Confidence 99843 2555555556789999999999999999999985 5899999999999999 6899999999999887777
Q ss_pred CCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
...+...|.+.|||||.+.- .|..++||||||+.|+||.||..||.+. .+.+++.+++...+.... .-..+|+.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~-~~~gFSp~ 324 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLP-GHMGFSPD 324 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCC-cccCcCHH
Confidence 77777789999999998853 4678899999999999999999999874 566788888876552222 22348999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+++|+..||+.|+.+||...++|+|||++.+..
T Consensus 325 F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 325 FQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET 357 (391)
T ss_pred HHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence 999999999999999999999999999998764
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=330.27 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=217.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+.+.||+|+||.||+|.+..+|+.|++|.+...... ......+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEE
Confidence 378889999999999999999999999999998654332 34567889999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCcc
Confidence 999999999988665556799999999999999999999999999999999999998 47889999999988664433
Q ss_pred C-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 ~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
. .....|++.|+|||++.+. .+.++||||||+++|+|++|+.||...........+........ ...++.++.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV---SQMYSQQLAQL 232 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---ccccCHHHHHH
Confidence 2 2345788999999987654 57899999999999999999999988877666666655432211 12578899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.+||+.+|++||++.++++|||+
T Consensus 233 i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=330.81 Aligned_cols=254 Identities=22% Similarity=0.466 Sum_probs=214.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCeEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYIA 175 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~~~lv 175 (562)
.|++.+.||.|++|.||++.+..+++.||+|.+..... .....+.+.+|+.+++.+ +|||++++++.+.. ...+|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEE
Confidence 48999999999999999999999999999999865432 223456788999999999 59999999998764 4568999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+.+.......+++..+..++.+++.||.+||++||+||||||+||+++ .++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEeccc
Confidence 9999999999988765556789999999999999999999999999999999999998 5789999999998765432
Q ss_pred C-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
. ......+++.|+|||++.+. ++.++||||||+++|+|++|+.||...........+..+... .....+++++.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 232 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP---PMPKDYSPELGE 232 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC---CCccccCHHHHH
Confidence 2 22345789999999987654 578999999999999999999999877766665555554321 122457899999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccc
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
++.+||..+|++||++.+++.||||
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=338.28 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=212.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE------
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE------ 167 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~------ 167 (562)
..+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++.+||||+++++++.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 4468999999999999999999999999999999886542 244568889999999977999999999885
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
....+|+||||+++|+|.+++.......+++..+..++.||+.||.|||+.||+|+||+|+||+++ +++.++|+|||
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg 166 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFG 166 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCc
Confidence 356789999999999999988665566788999999999999999999999999999999999998 57889999999
Q ss_pred CccccCCC-CCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
++...... .......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+..... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~ 244 (282)
T cd06636 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--P 244 (282)
T ss_pred chhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--C
Confidence 98765322 2233467899999999874 2357789999999999999999999977655444433333221 1
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
......++.++.+||.+||..||.+||++.++|+||||
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11223578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=351.94 Aligned_cols=250 Identities=22% Similarity=0.371 Sum_probs=199.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||.|+||.||+|.+..++..||+|+..... ...|+.+++.+ +||||+++++++......++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhC-CCCCCcChhheEEeCCeeEEE
Confidence 36999999999999999999999999999999754332 24699999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+|++. ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 136 ~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 136 LPHYS-SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EEccC-CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEecCccccccccC
Confidence 99995 588887754 345789999999999999999999999999999999999998 4788999999999765444
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh----------hHHHHHHhC----CCCCC
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----------GIFKEVLRN----KPDFR 320 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------~~~~~~~~~----~~~~~ 320 (562)
.......||+.|+|||++.+ .++.++|||||||++|||+++..|+...... ..+..+... ...++
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 44455679999999998765 4689999999999999999865554332111 111111110 00011
Q ss_pred C------------------C--------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 321 R------------------K--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 321 ~------------------~--------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
. . ....++.++.+||.+||+.||.+|||+.++|+||||+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0 0 01245677888999999999999999999999999985
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=330.30 Aligned_cols=255 Identities=25% Similarity=0.441 Sum_probs=219.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++.+ +||||+++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 488999999999999999999999999999998765432 33567889999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+++.......+++..+..++.+++.||.|||++||+|+||+|+||+++. .+..+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCceecCCCc
Confidence 9999999999886655566899999999999999999999999999999999999974 34578999999998765544
Q ss_pred CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
......+++.|+|||.+.+. .+.++||||||+++|+|++|+.||...+.......+...... .....+++.+.+++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA---PISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC---CCCCCcCHHHHHHH
Confidence 44456789999999998654 478999999999999999999999887766666665544322 12235789999999
Q ss_pred HHcCccCccCCCCHHHHhcCccc
Q 008547 336 KKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 336 ~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.+||..+|.+|||+.++++||||
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=336.88 Aligned_cols=254 Identities=30% Similarity=0.452 Sum_probs=210.3
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||.|+||+||+|.+..+|+.||+|.+.............+.+|+.+++.+. ||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999987644333334556778999999995 9999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccC
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~g 263 (562)
|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcchhhhccCCccccccC
Confidence 99988665545799999999999999999999999999999999999998 478899999999876654444445578
Q ss_pred CCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccC
Q 008547 264 SAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 342 (562)
Q Consensus 264 t~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d 342 (562)
+..|+|||++.+ .++.++||||||+++|+|++|+.||...........+............+.+++.+.++|.+||..|
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 889999998755 4578999999999999999999999765542222222222222222233457899999999999999
Q ss_pred ccCCC-----CHHHHhcCcccccc
Q 008547 343 PRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 343 P~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|.+|| ++.+++.||||+..
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhcC
Confidence 99999 89999999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=335.16 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=208.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++++ +||||+++++.+...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEE
Confidence 5788999999999999999999999999999986542 233556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|..+ ..+++..+..++.||+.||.|||+.||+|+||||+|||++ .++.++|+|||++......
T Consensus 79 e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 79 EFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred ecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceecccc-
Confidence 99999988543 3578899999999999999999999999999999999998 4789999999999765432
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-------hHHHHHHhCCCCCCCCCCCCCC
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-------GIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.....+||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+.... ....+....+
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 226 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--PPVLPVGQFS 226 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--CCCCCCCcCC
Confidence 2344689999999998865 4688999999999999999999999653221 1122222111 1112234578
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+++.+++.+||..+|.+||++.++++||||+...
T Consensus 227 ~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 227 EKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred HHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 8999999999999999999999999999998763
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=338.70 Aligned_cols=258 Identities=29% Similarity=0.474 Sum_probs=217.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+.+.||.|+||.||++.+..+++.||+|.+.............+.+|+.+++.+ +||||+++++.+..++.+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 588999999999999999999999999999998765433334556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++|++|.+.+.. ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCccccCcCc
Confidence 99999999988843 35789999999999999999999999999999999999998 57899999999986421100
Q ss_pred ----------------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 257 ----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 257 ----------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
......++..|+|||.+.. ..+.++|||||||++|+|++|..||.+....+....+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 235 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence 0112467889999998754 46889999999999999999999998887777777766654433
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCC---HHHHhcCcccccc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
+... +.++.++.++|.+||..+|++||+ +.++|+||||...
T Consensus 236 ~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 236 PEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred CCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 3322 257899999999999999999997 7999999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=339.50 Aligned_cols=257 Identities=27% Similarity=0.391 Sum_probs=210.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||++.+..+|..+|+|.+.... .......+.+|+++++++ +||||+++++.+..++.+++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEe
Confidence 5899999999999999999999999999999886432 233556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||+++++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+|||++ .++.+||+|||++......
T Consensus 79 ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCccccccc
Confidence 99999999998843 3678999999999999999999997 6999999999999998 4788999999998765332
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC---------------
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF--------------- 319 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------------- 319 (562)
.....+|++.|+|||++.+. ++.++||||||+++|+|++|+.||...+.......+.......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCC
Confidence 22456789999999988654 5788999999999999999999996554332222111100000
Q ss_pred -------------------CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 -------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 -------------------~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+..+...++.++.+|+.+||..+|++||++.++++||||....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred ccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 0011123678899999999999999999999999999998643
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=336.86 Aligned_cols=258 Identities=27% Similarity=0.481 Sum_probs=215.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|.+.+.||.|+||.||+|.+..++..||+|.+..... .....+.+|+.+++.+ +||||+++++.+..+...|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEE
Confidence 3589999999999999999999999999999999875442 2346788999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++.....
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 168 (296)
T ss_pred eecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccchhccc
Confidence 9999999999988732 4588999999999999999999999999999999999998 578899999999876543
Q ss_pred CCC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
... .....+++.|+|||.+.+. .+.++|||||||++|+|++|+.||...........+..... ......+.++..+.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 247 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFR 247 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC-CCCCCccccCHHHH
Confidence 322 2345789999999987654 58899999999999999999999987665444333332221 11112245788999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+++.+||..+|++||++.++++||||.....
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 9999999999999999999999999987644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-42 Score=355.85 Aligned_cols=254 Identities=22% Similarity=0.357 Sum_probs=204.2
Q ss_pred cccceeecceeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+..+|.+++.||.|+||.||+|... .++..||+|.+.... ...+|+.+++.| +||||+++++++.....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l-~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTI-SHRAIINLIHAYRWKST 160 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhc-CCCCccceeeeEeeCCE
Confidence 4568999999999999999999754 356789999876432 345799999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+|||++. ++|..++ .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 161 ~~lv~e~~~-~~l~~~l--~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYV--DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAACK 234 (392)
T ss_pred EEEEehhcC-CCHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCccccc
Confidence 999999995 6888877 3446799999999999999999999999999999999999998 578999999999976
Q ss_pred cCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---hHHHHHHhC----CCCCC
Q 008547 252 IKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRN----KPDFR 320 (562)
Q Consensus 252 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~----~~~~~ 320 (562)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... ..+..+... ...++
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 543322 234679999999999865 4688999999999999999999999765432 122222211 00000
Q ss_pred C------------------C--CC------CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 R------------------K--PW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ~------------------~--~~------~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
. + .+ ..++.++.+||.+||..||++|||+.++|.||||+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 0 0 00 13466789999999999999999999999999998643
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=336.01 Aligned_cols=263 Identities=30% Similarity=0.497 Sum_probs=211.7
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
+..-....++|.+.+.||+|+||.||+|.+..+++.+|+|++..... ....+.+|+.+++.+.+||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 33444566789999999999999999999999999999998764321 33567889999999967999999999874
Q ss_pred -----cCCeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 168 -----DDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 168 -----~~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
.++.+++||||+++++|.+.+.. .....+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCC
Confidence 45679999999999999887643 2335688999999999999999999999999999999999998 4678
Q ss_pred eEEeeccCccccCCCC-CcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 008547 241 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 241 vkl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 313 (562)
+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|+.||...........+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP 242 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc
Confidence 9999999987654322 2234578999999998742 35789999999999999999999997765544433332
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
..... .......++..+.+||.+||..||++|||+.++++|+||
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 243 RNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 22111 111112357789999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=362.98 Aligned_cols=247 Identities=30% Similarity=0.512 Sum_probs=207.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEE-EE---c---C
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FE---D---D 169 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~-~~---~---~ 169 (562)
+++|.+.|.+|||+.||+|++...|..||+|++-.. +....+.+.+||++|+.|++|+|||.+++. .. . .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 688999999999999999999888899999988654 456888999999999999999999999993 22 1 1
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
-.++|+||||.||.|.+++.......|++.+++.|++++|+|+.+||... |||||||-+||||. .+++.||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCccc
Confidence 35889999999999999998776777999999999999999999999987 99999999999999 57899999999
Q ss_pred CccccCCCC-Ccc---------cccCCCcccCchhcc---c-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 008547 248 LSDFIKPGK-KFQ---------DIVGSAYYVAPEVLK---R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 248 ~a~~~~~~~-~~~---------~~~gt~~y~aPE~~~---~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 313 (562)
.|...-... ... ....|+.|+|||++. + ..++|+|||+|||+||-|++..+||...... .|+
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIl 267 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AIL 267 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEE
Confidence 986532222 111 134699999999974 2 3489999999999999999999999766443 344
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+...++ +.+..+..+.+||+.||+.||.+||++.+++.+
T Consensus 268 ng~Y~~P--~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 268 NGNYSFP--PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred eccccCC--CCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 4444443 446789999999999999999999999998864
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=355.73 Aligned_cols=251 Identities=22% Similarity=0.342 Sum_probs=201.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+.+|++| +|||||++++++..++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence 3479999999999999999999999999999996422 2356899999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||++. ++|..++... ...+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+++....
T Consensus 238 v~e~~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 238 VLPKYR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARG 312 (461)
T ss_pred EEEccC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceeccc
Confidence 999995 6888877543 34699999999999999999999999999999999999998 478899999999976543
Q ss_pred CCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh--------hhHHHHHHhCCC---CC
Q 008547 255 GKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--------DGIFKEVLRNKP---DF 319 (562)
Q Consensus 255 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~---~~ 319 (562)
... ....+||+.|+|||++.+. ++.++|||||||+||||++|..|+..... ..+...+..... .+
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 221 2345799999999998654 68899999999999999998876643221 122222211110 01
Q ss_pred ------------------------CCCCCC---CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 320 ------------------------RRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 320 ------------------------~~~~~~---~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
....|. .++.++.+||.+||+.||.+|||+.++|+||||+.
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 111122 35668999999999999999999999999999974
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=336.49 Aligned_cols=260 Identities=30% Similarity=0.456 Sum_probs=216.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..+.|++++.||.|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.+ +||||+++++.+..++.+|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEE
Confidence 346799999999999999999999999999999998654 234567788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|...+... ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++....
T Consensus 86 lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 86 IMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceecc
Confidence 999999999987766433 35689999999999999999999999999999999999998 47889999999986543
Q ss_pred CC-CCcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 254 PG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
.. .......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...+......++....... ......
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 240 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LSQPSK 240 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc-CCCCcc
Confidence 22 22334578899999998742 24678999999999999999999998777665555554433211 111235
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.++.++|.+||..+|++||++.++++||||....
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 778999999999999999999999999999997654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=333.86 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=215.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++++ +||||+++++.+..+...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence 488999999999999999999999999999999766544445678899999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+.+++|..++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 80 DLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred eCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCCc
Confidence 999999999887443 5789999999999999999999999999999999999998 57889999999988765544
Q ss_pred CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
......|+..|+|||++... .+.++|+||||+++|+|++|..||...+. ...+...... ......+.++..+.+
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADVLYPATWSTEAID 231 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccccCcccCcHHHHH
Confidence 44456788999999988654 58899999999999999999999987664 2222222221 111222457899999
Q ss_pred HHHHcCccCccCCCCH--HHHhcCccc
Q 008547 334 FVKKLLVKDPRARLTA--AQALSHPWV 358 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~--~~~l~hp~f 358 (562)
+|.+||..||.+||++ .++++||||
T Consensus 232 ~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 232 AINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHccCChhHcCCccHHHHhcCCCC
Confidence 9999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=334.36 Aligned_cols=259 Identities=29% Similarity=0.489 Sum_probs=213.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC---
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--- 169 (562)
...++|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ....+.+|+.+++++.+||||+++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 356789999999999999999999999999999999865421 3456778999999997799999999988643
Q ss_pred --CeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 170 --NYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
+.+|+|+||+++++|.+.+.. .....+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEee
Confidence 468999999999999887743 2345789999999999999999999999999999999999998 477899999
Q ss_pred ccCccccCCCC-CcccccCCCcccCchhcccC------CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC
Q 008547 246 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 246 fG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
||++....... ......|+..|+|||++... .+.++|||||||++|+|++|+.||...........+......
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~ 251 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPP 251 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCC
Confidence 99987654322 22345788999999987532 478999999999999999999999877665555555443322
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
... .....+..+.+||.+||..+|++||++.++++||||+
T Consensus 252 ~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 252 TLL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 111 1134677899999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=325.12 Aligned_cols=263 Identities=29% Similarity=0.433 Sum_probs=207.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCe
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~ 171 (562)
.|+++..||+|+||.||+|..+.++. .+|||++..++.... ......+|+.+++.|+ ||||+.|..+|.. +..
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHDKK 102 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccCce
Confidence 58999999999999999996555433 689999876643222 2345679999999995 9999999998887 889
Q ss_pred EEEEEeccCCCChHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC-CCCCCeEEeecc
Q 008547 172 VYIAMELCEGGELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFG 247 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~-~~~~~vkl~DfG 247 (562)
+++++||++. +|+..+.-. +...++...++.|+.||+.|+.|||++.|+||||||.|||+... .+.|.|||+|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 9999999976 888877432 33569999999999999999999999999999999999999742 346999999999
Q ss_pred CccccCCC----CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---------hHHHHH
Q 008547 248 LSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GIFKEV 312 (562)
Q Consensus 248 ~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~ 312 (562)
+++.+... .+....+.|.+|+|||.+.| .|+++.||||+|||+.||++-.+.|.+.... ..+..|
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99876533 23446688999999999876 5799999999999999999999988654321 223333
Q ss_pred HhCCCCCCCCCCCC---------------------------------CCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 313 LRNKPDFRRKPWPS---------------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 313 ~~~~~~~~~~~~~~---------------------------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
+.--.......||. -++...+|+.+||+.||.+|+|+.++|+|+||+
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 32111112222321 244578999999999999999999999999999
Q ss_pred ccC
Q 008547 360 EGG 362 (562)
Q Consensus 360 ~~~ 362 (562)
+..
T Consensus 342 ~d~ 344 (438)
T KOG0666|consen 342 EDP 344 (438)
T ss_pred cCC
Confidence 753
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=334.77 Aligned_cols=257 Identities=30% Similarity=0.528 Sum_probs=217.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ......+.+|+.+++.+. ||||+++++++.++..+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence 68899999999999999999999999999999865432 234567889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++......
T Consensus 79 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 79 EYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred EeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccceeecccc
Confidence 99999999988743 2789999999999999999999999999999999999998 4788999999999876543
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+...... ......+++++.++
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 230 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--SLEGNKFSKPFKDF 230 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCC--CCcccccCHHHHHH
Confidence 23345578899999998765 4588999999999999999999999776655554444443221 11112278899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
+.+||..+|++||++.++++||||+.....
T Consensus 231 l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 231 VSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred HHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 999999999999999999999999986554
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=335.68 Aligned_cols=255 Identities=28% Similarity=0.513 Sum_probs=208.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.+. ||||+++++++.....+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEEE
Confidence 68999999999999999999999999999998865432 1223456789999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++++.|...+. ....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 80 EYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred eccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCc
Confidence 9999877766542 335689999999999999999999999999999999999998 46789999999998765433
Q ss_pred -CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC---------------
Q 008547 257 -KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD--------------- 318 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--------------- 318 (562)
......++..|+|||++.+ .++.++||||||+++|+|++|+.||.+....+....+......
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 2334568899999998764 3578999999999999999999999877654443332211000
Q ss_pred ----CCC--------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 ----FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ----~~~--------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.+. ..++.++..+.+||.+||..+|++||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000 0124578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=333.72 Aligned_cols=257 Identities=31% Similarity=0.478 Sum_probs=215.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
-|++.+.||.|+||.||+|.+..++..+|+|.+.... ......+.+|+.+++.+ +||||+++++.+..++..|+|+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEE
Confidence 4788999999999999999999999999999886442 33566788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++++|...+.. ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 82 EFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEccccccccccccc
Confidence 99999998877643 345789999999999999999999999999999999999998 4788999999998654322
Q ss_pred CCcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.......+|+.|+|||++.. .++.++|||||||++|+|++|++||...+..+....+........ .....++.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSS 236 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CCccccCH
Confidence 22334578999999998742 246789999999999999999999987776666555554432211 11235788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+||.+||..||.+||++.++++||||+...
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 999999999999999999999999999999754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=337.84 Aligned_cols=262 Identities=28% Similarity=0.483 Sum_probs=216.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++..++..|
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEE
Confidence 44689999999999999999999999999999999865432 2346688999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++....
T Consensus 93 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccceEcc
Confidence 99999999999988732 4588999999999999999999999999999999999998 57899999999987654
Q ss_pred CCCC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.... .....+++.|+|||.+.+. .+.++|||||||++|+|++|..||...........+...... .......++..+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 245 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPERLSAVF 245 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-CCCCccccCHHH
Confidence 4322 2345789999999988654 578999999999999999999999776543332222221111 111123577889
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCCCCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~ 366 (562)
.+|+.+||..+|.+||++.++++||||+.......
T Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 246 RDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 99999999999999999999999999998765444
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=335.33 Aligned_cols=258 Identities=33% Similarity=0.506 Sum_probs=217.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..++..||+|.+... .....+.+.+|+.+++.+. ||||+++++.+..+...|+|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Confidence 5799999999999999999999889999999998643 2345567889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 81 IEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVSAKNKST 156 (280)
T ss_pred eeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccchhhccc
Confidence 999999999887643 335699999999999999999999999999999999999998 4789999999998654322
Q ss_pred -CCcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.......+|+.|+|||.+.. .++.++||||||+++|+|++|+.||...........+........ ...+.++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWS 235 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCC
Confidence 22234578999999998742 246789999999999999999999988776666666655432211 1123578
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++.++|.+||..+|.+||++.++++||||....
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 8999999999999999999999999999998763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=333.47 Aligned_cols=253 Identities=28% Similarity=0.459 Sum_probs=208.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.+ +||||+++++.+...+.+|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEE
Confidence 47899999999999999999999999999999986543 22345678899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++. ..+.+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 85 MEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITAT 159 (267)
T ss_pred EeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCc
Confidence 99999999999874 345799999999999999999999999999999999999998 4778999999998755322
Q ss_pred C-CcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCCCH
Q 008547 256 K-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISN 329 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 329 (562)
. ......||+.|+|||++. +.++.++|||||||++|+|++|..||...................+. .....++.
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSN 239 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCH
Confidence 1 223457899999999873 34678999999999999999999999766544433333222211111 11124678
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
.+.++|.+||..+|++||++.++++|||
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=336.09 Aligned_cols=256 Identities=32% Similarity=0.504 Sum_probs=212.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.+. ||||+++++++..+..+++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 488999999999999999999999999999998765322 234567889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+ +++|.+.+.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 79 EYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred ccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCC
Confidence 999 999998875433 6799999999999999999999999999999999999998 47889999999987664432
Q ss_pred --CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC-------------
Q 008547 257 --KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------------- 319 (562)
Q Consensus 257 --~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------- 319 (562)
......++..|+|||++.+. .+.++||||||+++|+|++|.+||.+......+..+.......
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 23445789999999987543 4789999999999999999988887766655544443311100
Q ss_pred ------CC-------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 320 ------RR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 320 ------~~-------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
+. ...+..+.++.+||.+||..+|.+||++.++|.||||.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00 01235678899999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=327.37 Aligned_cols=254 Identities=28% Similarity=0.474 Sum_probs=219.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||.+.+..+++.+|+|.+..... .......+.+|+.+++++ +||||+++++++.+.+.+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 58999999999999999999999999999999865432 234556788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.......+++..+..++.|++.||.|||+.|++|+||+|+||+++ +++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEccccc
Confidence 999999999988665556789999999999999999999999999999999999998 47889999999987654333
Q ss_pred -CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......+++.|+|||.+.+. .+.++||||||+++|+|++|..||......+....+..+..... .+.++.++.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV---VSVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---ccccCHHHHHH
Confidence 23446789999999987654 57889999999999999999999988777777777765443221 14578999999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.+||..+|.+||++.++++|||+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=330.73 Aligned_cols=252 Identities=32% Similarity=0.529 Sum_probs=210.5
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||.|+||.||+|.+..+|+.||+|++.+...........+..|..++....+||||+++++++..++.+|+|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999999999999999987554322223344556666665554799999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~ 261 (562)
++|.+++. ....+++..+..++.||+.||.|||+.+++|+||+|+||+++ .++.+||+|||++..... ....
T Consensus 82 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~---~~~~ 153 (260)
T cd05611 82 GDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE---NKKF 153 (260)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc---cccC
Confidence 99998874 335789999999999999999999999999999999999998 477899999999875432 2345
Q ss_pred cCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCc
Q 008547 262 VGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340 (562)
Q Consensus 262 ~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~ 340 (562)
.+++.|+|||.+.+. ++.++||||||+++|+|++|..||...........+......+.....+.+++.+.++|.+||.
T Consensus 154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 233 (260)
T cd05611 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLC 233 (260)
T ss_pred CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHcc
Confidence 688999999988654 4889999999999999999999998887777777766655544444445688999999999999
Q ss_pred cCccCCCC---HHHHhcCcccccc
Q 008547 341 KDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 341 ~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
.+|++||+ +.+++.||||+..
T Consensus 234 ~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 234 MDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCHHHccCCCcHHHHHcChHhhcC
Confidence 99999995 4799999999763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=335.52 Aligned_cols=257 Identities=30% Similarity=0.514 Sum_probs=217.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEE
Confidence 479999999999999999999999999999999865432 2356788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++++|...+.. ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 95 MEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchhcccc
Confidence 999999999887732 3589999999999999999999999999999999999998 4788999999998765443
Q ss_pred CC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. .....+++.|+|||.+.+. .+.++|||||||++|+|++|+.||...........+...... .......+++.+.+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 247 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFRD 247 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHHH
Confidence 22 2345789999999987654 588999999999999999999999887665554444433221 11223468899999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
||.+||..||.+||++.++++||||+....
T Consensus 248 li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 248 FLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 999999999999999999999999997654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=336.74 Aligned_cols=259 Identities=27% Similarity=0.422 Sum_probs=209.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe-----
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY----- 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~----- 171 (562)
+|++.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 68999999999999999999999999999998765432 122345678899999999768999999999886655
Q ss_pred EEEEEeccCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 172 VYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||+|+||+++. .++.+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeeccc
Confidence 8999999985 7888775432 246899999999999999999999999999999999999984 368899999999
Q ss_pred ccccCCC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC----
Q 008547 249 SDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---- 321 (562)
Q Consensus 249 a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---- 321 (562)
+...... .......+++.|+|||++.+ ..+.++||||||+++|+|++|..||.+.+.......+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8754322 22233467889999998754 3488999999999999999999999887766555544332110000
Q ss_pred --------------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 322 --------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 322 --------------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
...+.+++++.+||.+||..||.+||++.+++.||||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 01245788999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=338.92 Aligned_cols=255 Identities=27% Similarity=0.499 Sum_probs=205.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.+ +||||+++++++.+.+.+++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 48899999999999999999999999999999865432 222345677899999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++ ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 79 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 79 EYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPV 153 (284)
T ss_pred ecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCC
Confidence 9996 4787776433 45689999999999999999999999999999999999998 47889999999987654322
Q ss_pred -CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCC--------------CC
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNK--------------PD 318 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~--------------~~ 318 (562)
......+++.|+|||++.+. ++.++|||||||++|+|++|..||... +..+.+..+.... +.
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 22345678999999988653 478999999999999999998886443 3333333322110 00
Q ss_pred C---CC--------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 F---RR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ~---~~--------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+ .. ...+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0 00 0123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=330.53 Aligned_cols=250 Identities=31% Similarity=0.547 Sum_probs=212.9
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++.+.+++.+++|+||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 69999999999999999999999999765544444567899999999999 59999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccC
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~g 263 (562)
|.+.+.. ...+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++.............+
T Consensus 80 L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 80 LWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccccccccC
Confidence 9998843 35689999999999999999999999999999999999998 478899999999987655443445678
Q ss_pred CCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC--hhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCc
Q 008547 264 SAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340 (562)
Q Consensus 264 t~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~ 340 (562)
++.|+|||.+.+ .++.++|+||||+++|+|++|..||.... .......+.........+ +..++++.++|.+||.
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~ 232 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLR 232 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHcc
Confidence 999999998754 45889999999999999999999997776 455555555322222211 2357899999999999
Q ss_pred cCccCCCC-----HHHHhcCcccccc
Q 008547 341 KDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 341 ~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
.+|.+||+ +.++++||||++.
T Consensus 233 ~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 233 RNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CChhhCcCCcccCHHHHhcChhhhCC
Confidence 99999999 9999999999865
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=334.21 Aligned_cols=267 Identities=29% Similarity=0.422 Sum_probs=219.1
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCC-----CcceE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKF 162 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp-----~iv~l 162 (562)
+...+.+..+|.+.+.+|+|.||.|-.+.+..++..||||+++.- ....+..+-|+++|+++..+. -+|++
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m 156 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQM 156 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence 445566788999999999999999999999999999999988643 246677788999999995332 37888
Q ss_pred EEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC------
Q 008547 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK------ 236 (562)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~------ 236 (562)
.+||...++.|||+|.+ |-++++++..+...+++...++.+++||+.++.|||+.+++|.||||+|||+.+..
T Consensus 157 ~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~ 235 (415)
T KOG0671|consen 157 RDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYN 235 (415)
T ss_pred ehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEec
Confidence 99999999999999999 66999999888888999999999999999999999999999999999999996421
Q ss_pred -----------CCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC
Q 008547 237 -----------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT 304 (562)
Q Consensus 237 -----------~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~ 304 (562)
.+..|+|+|||.|.+... .....+.|..|+|||++.+ +++.++||||+||||+|+++|...|....
T Consensus 236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 236 PKKKVCFIRPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred cCCccceeccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 245799999999987543 3467889999999998766 78999999999999999999999998877
Q ss_pred hhh---HHHHHHhCCCCCC-------------CCCCCC--------------------------CCHHHHHHHHHcCccC
Q 008547 305 EDG---IFKEVLRNKPDFR-------------RKPWPS--------------------------ISNSAKDFVKKLLVKD 342 (562)
Q Consensus 305 ~~~---~~~~~~~~~~~~~-------------~~~~~~--------------------------~~~~~~~ll~~~l~~d 342 (562)
..+ +.+.++...+... .-.|++ -..++.+||++||.+|
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 554 3333332111100 011221 0124789999999999
Q ss_pred ccCCCCHHHHhcCcccccc
Q 008547 343 PRARLTAAQALSHPWVREG 361 (562)
Q Consensus 343 P~~Rps~~~~l~hp~f~~~ 361 (562)
|.+|+|+.|+|.||||+..
T Consensus 394 P~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 394 PARRITLREALSHPFFARL 412 (415)
T ss_pred ccccccHHHHhcCHHhhcC
Confidence 9999999999999999864
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=328.01 Aligned_cols=254 Identities=25% Similarity=0.532 Sum_probs=217.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||++.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 588999999999999999999999999999998654332 33456789999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.......+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcch
Confidence 999999999988655555689999999999999999999999999999999999998 47789999999987654322
Q ss_pred C-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 ~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
. .....|++.|+|||++.+. .+.++|+|||||++++|++|+.||......+....+..+.... ....++.++.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP---VSSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC---CcccCCHHHHHH
Confidence 2 2234688899999987654 5788999999999999999999998877777777766554321 123578899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
|.+||+.+|.+||++.+++.||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=334.15 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=204.0
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----CCeEEEEEe
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAME 177 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----~~~~~lv~e 177 (562)
..||.|++|.||+|.. +|+.||||++.+.........+.+.+|+.+|+++. ||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 4689999999999975 78999999997655444444677889999999995 9999999999876 457899999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
|+++|+|.+++.. ...+++.....++.+++.||.|||+ .+++||||||+|||++ .++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 103 YCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred eCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHhhhcccc
Confidence 9999999998843 3578999999999999999999998 4999999999999998 57899999999987653322
Q ss_pred CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+......+..+ ...++++.+
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~ 253 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKC 253 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHH
Confidence 23468899999999864 56899999999999999999999999888777777776554433321 257899999
Q ss_pred HHHHcCccCccCCCCHHHHhc
Q 008547 334 FVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~ 354 (562)
|+.+||+.||++|||+.++++
T Consensus 254 li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 254 IVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHhcCCcccCcCHHHHHH
Confidence 999999999999999999974
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=346.66 Aligned_cols=236 Identities=27% Similarity=0.423 Sum_probs=205.6
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
++-||.|+.|.||+|+ ..++.||||++..-+ ..+|.-|++|. ||||+.+.|+|.....+|||||||.
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~elk----------ETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRELK----------ETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhhh----------hhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence 4569999999999995 568899999875321 35788899995 9999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCccc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~ 260 (562)
.|.|...| +....++......|..+|+.|+.|||.+.|||||||.-||||. .+..|||+|||.++......+.-.
T Consensus 196 ~GqL~~VL--ka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 196 QGQLYEVL--KAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred cccHHHHH--hccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhh
Confidence 99999988 4557899999999999999999999999999999999999998 477899999999987765555567
Q ss_pred ccCCCcccCchhcccCC-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 261 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
++||..|||||++.... +.|+||||||||||||+||..||.+.+...++..+-.+....+. ...+|+-++-||+.||
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv--PstcP~GfklL~Kqcw 348 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV--PSTCPDGFKLLLKQCW 348 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC--cccCchHHHHHHHHHH
Confidence 89999999999998765 99999999999999999999999888777666655444444333 2468889999999999
Q ss_pred ccCccCCCCHHHHhcCc
Q 008547 340 VKDPRARLTAAQALSHP 356 (562)
Q Consensus 340 ~~dP~~Rps~~~~l~hp 356 (562)
.-.|..||++.++|.|-
T Consensus 349 ~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 349 NSKPRNRPSFRQILLHL 365 (904)
T ss_pred hcCCCCCccHHHHHHHH
Confidence 99999999999999884
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=334.99 Aligned_cols=257 Identities=27% Similarity=0.480 Sum_probs=229.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|..+..||+|+||+|-+|..+.+.+.+|||++++.........+--+.|-++|.....-|++++++..|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46889999999999999999989999999999998876655555666677888887665678999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc-cCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~-~~~ 254 (562)
|||+.||+|..++ ++-+.+.++.+..++..|+-||-+||++|||+||||.+||||+ ..|+|||+|||+++. +-.
T Consensus 429 MEyvnGGDLMyhi--QQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd---~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHI--QQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEecCchhhhHH--HHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec---cCCceEeeecccccccccC
Confidence 9999999998888 5557899999999999999999999999999999999999999 489999999999975 345
Q ss_pred CCCcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
+.++.++||||.|+|||++. ..|+..+|+||+|++||||+.|.+||.+.++.++++.|......++. .+|.++.+
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ 579 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVA 579 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHH
Confidence 56677899999999999875 56789999999999999999999999999999999999988776663 68999999
Q ss_pred HHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
++..+|...|.+|.. -.++-.||||+..
T Consensus 580 ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 999999999999984 3678899999864
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=351.09 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=213.0
Q ss_pred eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCC
Q 008547 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG 182 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g 182 (562)
.||+|.||+||-|++..|...+|||.+.... ....+.+..||.+-+.|+ |.|||+++|.+..++.+-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 6999999999999999999999999986443 235677889999999996 999999999999999999999999999
Q ss_pred ChHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-CCCcc
Q 008547 183 ELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQ 259 (562)
Q Consensus 183 ~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~-~~~~~ 259 (562)
+|.+.+. .+=+++ .+..+..+.+||++||.|||++.|||||||-+|||++. -.|.+||+|||.++.+.. +..+.
T Consensus 658 SLSsLLr-skWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--ySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 658 SLSSLLR-SKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--YSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred cHHHHHH-hccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee--ccceEEecccccchhhccCCcccc
Confidence 9988774 344667 78899999999999999999999999999999999986 578999999999876533 34456
Q ss_pred cccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 260 DIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
++.||..|||||++.. +|+.++|||||||++.||.||++||........ ....-+.....++....++.+++.||.
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyKvHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYKVHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcceecCCCCcHHHHHHHHHHHH
Confidence 7899999999999964 569999999999999999999999976544321 111112222222223457788999999
Q ss_pred HcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 337 KLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 337 ~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
+|+.+||.+||+|.++|..||++....+.
T Consensus 814 rcFepd~~~R~sA~~LL~DpFlq~~~kk~ 842 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQDPFLQHNNKKP 842 (1226)
T ss_pred HHcCCCcccCccHHHhccCcccccCCCCC
Confidence 99999999999999999999999764433
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=329.70 Aligned_cols=253 Identities=30% Similarity=0.513 Sum_probs=210.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc------hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL------PIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
+|.+...||.|+||.||+|.+..+++.||+|.+....... ....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence 4788899999999999999998899999999886543221 12346788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..++|+||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++ .++.++|+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~dfg~~~ 154 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKISDFGISK 154 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEecccCCCc
Confidence 99999999999999988843 35689999999999999999999999999999999999998 57889999999987
Q ss_pred ccCCCC-------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC
Q 008547 251 FIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 251 ~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 322 (562)
...... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+.... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~ 231 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA---SPE 231 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC---CCc
Confidence 664211 1123468899999998865 45788999999999999999999998766554444443321 111
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
....++..+.++|.+||+.||.+||++.++++||||
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 224578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=331.88 Aligned_cols=254 Identities=27% Similarity=0.436 Sum_probs=207.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++..++.+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEE
Confidence 3579999999999999999999999999999999864422 2345678999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 84 CMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAAKITA 158 (267)
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCccceeecc
Confidence 9999999999988743 35789999999999999999999999999999999999998 477899999999976543
Q ss_pred CC-CcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCCC
Q 008547 255 GK-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSIS 328 (562)
Q Consensus 255 ~~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 328 (562)
.. ......|++.|+|||.+. ...+.++|||||||++|+|++|+.||...........+.......+. .....++
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWS 238 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccC
Confidence 22 223457889999999874 23477899999999999999999999655433322222111111111 1112467
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
..+.+||.+||..+|++||+++++++|+|
T Consensus 239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 239 STFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 89999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=335.75 Aligned_cols=256 Identities=28% Similarity=0.457 Sum_probs=210.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||.|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEe
Confidence 37889999999999999999999999999998865432 222345788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+. ++|.+++.......+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.+||+|||++.......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhhcccCc
Confidence 9996 5888888665567789999999999999999999999999999999999998 47889999999987654322
Q ss_pred -CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC-------------
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR------------- 320 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 320 (562)
......+++.|+|||++.+. .+.++||||||+++|+|++|+.||.+.........+........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 22334678899999987653 37789999999999999999999987765544443332111100
Q ss_pred -----C-------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 -----R-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 -----~-------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
. ...+.+++++.++|.+||..||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0 0123578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=349.83 Aligned_cols=259 Identities=25% Similarity=0.442 Sum_probs=220.8
Q ss_pred ccce-eecceeeccCCeEEEEEEEcCCCCEEEEEEeccc-ccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--
Q 008547 95 DRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN-KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (562)
Q Consensus 95 ~~~y-~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-- 170 (562)
+.+| +....||+|+|-+||+|.|..+|..||.-.+... ....+...+.|..|+.+|+.|. ||||+++|.+|.+..
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~ 116 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNK 116 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCc
Confidence 3455 4567899999999999999999999998655432 2234556789999999999995 999999999988655
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.+.+|+|++..|+|..|+. +.+.++...++.|++||+.||.|||++ .|||||||.+||+|+. ..|.|||+|+||
T Consensus 117 ~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG--~~G~VKIGDLGL 192 (632)
T KOG0584|consen 117 TINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG--NLGEVKIGDLGL 192 (632)
T ss_pred eeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC--CcCceeecchhH
Confidence 4889999999999999884 457789999999999999999999987 5999999999999985 689999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCC-CChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
|.....+. ....+|||.|||||++...|...+||||||++++||+|+..||.. .+...+++++..+......... -
T Consensus 193 Atl~r~s~-aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV--~ 269 (632)
T KOG0584|consen 193 ATLLRKSH-AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV--K 269 (632)
T ss_pred HHHhhccc-cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc--C
Confidence 98765433 334799999999999999999999999999999999999999965 4667888999887654322222 2
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+++++||.+||.. ...|||+.++|+||||....
T Consensus 270 dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~ 303 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDG 303 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence 57899999999998 99999999999999999853
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=331.54 Aligned_cols=257 Identities=30% Similarity=0.522 Sum_probs=212.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
..++|++.+.||.|+||.||+|.+..+++.+++|++..... ....+.+|+.+++++.+||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 34689999999999999999999998999999999865432 44678899999999977999999999997544
Q ss_pred ---eEEEEEeccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 171 ---YVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
.+|+||||+++++|.+.+.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECC
Confidence 5899999999999988775433 46789999999999999999999999999999999999998 478899999
Q ss_pred ccCccccCCCC-CcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC
Q 008547 246 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 246 fG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|..||...........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 99987654322 2234568999999998743 2467899999999999999999999876655555555443321
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
... ....++..+.+||.+||..||++|||+.++++|||+
T Consensus 237 ~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 TLK-SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CCC-chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 111 112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=334.97 Aligned_cols=260 Identities=28% Similarity=0.392 Sum_probs=213.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+..+|..||+|.+.... .......+.+|+.+++++ +||||+++++.+...+.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEE
Confidence 5889999999999999999999999999999886432 233456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 177 ELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+||||||+||+++ .++.+||+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccC
Confidence 9999999987764321 2368999999999999999999997 5999999999999998 478899999999876533
Q ss_pred CCCcccccCCCcccCchhcccC-------CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
. ......+++.|+|||.+.+. ++.++|||||||++|+|++|+.||...........+............+.+
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd06622 156 S-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGY 234 (286)
T ss_pred C-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCccc
Confidence 2 22345688899999987432 367899999999999999999999766554444333221111122223458
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+.++.+||.+||..+|.+||++.++++||||.....
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 235 SDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 899999999999999999999999999999987654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=334.48 Aligned_cols=262 Identities=26% Similarity=0.446 Sum_probs=213.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|++|.||+|.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 3699999999999999999999999999999988654322 22346678999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++ ++|.+.+.......+++..+..++.||+.||.|||++|++||||+|+||+++. .++.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99996 58888775554445788899999999999999999999999999999999984 3467999999999765332
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC----------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK---------- 322 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------- 322 (562)
.......+++.|+|||++.+ .++.++|||||||++|+|++|++||......+.+.++..........
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 22234567899999998765 34788999999999999999999998776655555443211100000
Q ss_pred ---------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 323 ---------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 323 ---------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+.+++++.+++.+||+.+|++||++.++++||||++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 1245788999999999999999999999999999998754
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=332.01 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=200.4
Q ss_pred eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHc--cCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.||+|+||.||++.+..+|+.||+|.+.+...........+.+|..+++.+ .+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765433232333445555444443 259999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCccc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~ 260 (562)
+|+|..++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.++|+|||++....... ...
T Consensus 81 ~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~~~~~~~-~~~ 154 (279)
T cd05633 81 GGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKK-PHA 154 (279)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcceeccccC-ccC
Confidence 9999887743 35699999999999999999999999999999999999998 57889999999987554322 234
Q ss_pred ccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008547 261 IVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 338 (562)
..||+.|+|||.+.. .++.++|||||||++|+|++|..||........ ..+............+.+++++.++|.+|
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 233 (279)
T cd05633 155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGL 233 (279)
T ss_pred cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHH
Confidence 578999999998753 358899999999999999999999965432211 11111111112222346889999999999
Q ss_pred CccCccCCC-----CHHHHhcCccccccC
Q 008547 339 LVKDPRARL-----TAAQALSHPWVREGG 362 (562)
Q Consensus 339 l~~dP~~Rp-----s~~~~l~hp~f~~~~ 362 (562)
|..||.+|| ++.++++||||+...
T Consensus 234 l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 234 LQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred hcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 999999999 699999999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=335.94 Aligned_cols=261 Identities=30% Similarity=0.439 Sum_probs=212.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
+|.+.+.||.|+||.||+|.+..+|+.||||.+...... .......+..|+.+++.+. ||||+++++++.+.+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999998755432 1223456778999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++.....
T Consensus 80 v~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGS 154 (298)
T ss_pred EEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccC
Confidence 99999 889998874332 3699999999999999999999999999999999999998 478899999999977644
Q ss_pred C-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC----------
Q 008547 255 G-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---------- 321 (562)
Q Consensus 255 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------- 321 (562)
. .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+....+.+..+.........
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 3 22333467889999998754 3578899999999999999998888776655555444332110000
Q ss_pred --------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 322 --------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 322 --------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..++..+.++.++|.+||.+||++|||+.+++.||||++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 011345788999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=332.28 Aligned_cols=253 Identities=29% Similarity=0.469 Sum_probs=206.5
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~lv 175 (562)
|++.+.||.|+||.||+|.+..+++.||+|++...... .......+|+.++.++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS--LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC--chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 67889999999999999999999999999988654321 12234457999999997799999999999987 899999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||++ ++|.+.+... ...+++..+..++.||+.||.|||+.|++||||+|+||+++ . +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 79 FELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSK 152 (282)
T ss_pred EecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccC
Confidence 99996 5888877543 35689999999999999999999999999999999999998 3 89999999999876554
Q ss_pred CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC----------------
Q 008547 256 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---------------- 317 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~---------------- 317 (562)
.......+++.|+|||.+.. ..+.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 44445678999999997643 357899999999999999999999987766554443322110
Q ss_pred C--CCCC-------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 318 D--FRRK-------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 318 ~--~~~~-------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
. ++.. ..+.++.++.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 0000 013568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=339.02 Aligned_cols=251 Identities=27% Similarity=0.435 Sum_probs=191.8
Q ss_pred cceeeccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cCCeEEEEE
Q 008547 101 GKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVYIAM 176 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~~~~~lv~ 176 (562)
+.+||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+++.+ +||||+++++++. .+..+++|+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 4579999999999998654 56789999886543 234577899999999 4999999999885 456789999
Q ss_pred eccCCCChHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC-CCCCCeEEeeccC
Q 008547 177 ELCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGL 248 (562)
Q Consensus 177 e~~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~-~~~~~vkl~DfG~ 248 (562)
||+.+ +|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+|||+... ..++.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99864 777766322 12358899999999999999999999999999999999999532 2467899999999
Q ss_pred ccccCCCC----CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---------hHHHHHH
Q 008547 249 SDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GIFKEVL 313 (562)
Q Consensus 249 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~ 313 (562)
++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 98654322 2234578999999998865 3588999999999999999999999654321 1111111
Q ss_pred hC--------------CCCCC-------C-------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 314 RN--------------KPDFR-------R-------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 314 ~~--------------~~~~~-------~-------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.. .+.+. . ......+..+.+||.+||..||.+|||+.++|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00000 0 0001234568899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=335.97 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=209.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|...+.||+|+||.||++.+..+|+.||+|.+..... ......+.+|+.++.++.+||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677899999999999999999999999999875432 2355678899999999966999999999999999999999
Q ss_pred eccCCCChHH---HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 177 ELCEGGELLD---RILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 177 e~~~~g~L~~---~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||+.. +|.+ .+.......+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHh
Confidence 99864 5544 33333446799999999999999999999975 999999999999998 4678999999999765
Q ss_pred CCCCCcccccCCCcccCchhcccC----CCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHHHhCC-CCCCCCCCCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNK-PDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 326 (562)
..........|++.|+|||++.+. ++.++|||||||++|+|++|+.||..... .+....+.... +......+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE 238 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence 444333445789999999998654 58899999999999999999999965542 12222222221 1222222245
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.++.+||.+||..+|++|||+.+++.||||+...
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 889999999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=329.05 Aligned_cols=256 Identities=28% Similarity=0.498 Sum_probs=210.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-------chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 588999999999999999999889999999987542211 111245678899999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
+..++||||+++++|.+.+... ..+++..+..++.||+.||.|||++|++||||+|+||+++ .++.++|+|||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~ 155 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGIS 155 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeecccc
Confidence 9999999999999999988433 6789999999999999999999999999999999999998 4789999999998
Q ss_pred cccCCCC---CcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC--CCCCC
Q 008547 250 DFIKPGK---KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFRR 321 (562)
Q Consensus 250 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~ 321 (562)
....... ......|+..|+|||.+... ++.++|+||||+++|+|++|..||...........+.... ..++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPP 235 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCc
Confidence 7543211 12345688999999987642 5889999999999999999999997655544444333222 22222
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
..++.++.++.++|.+||..+|.+||++.++|+||||
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 3345678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=336.59 Aligned_cols=260 Identities=26% Similarity=0.407 Sum_probs=210.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~ 173 (562)
.+|++.+.||.|+||.||+|.+..+|+.||+|++....... .....+.+|+.+++.+. ||||+++++++... +.++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEE
Confidence 47999999999999999999999999999999986543221 12334568999999995 99999999998754 5689
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+.+ +|.+.+... ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+||+|||++....
T Consensus 85 lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeeecC
Confidence 99999964 787776433 35689999999999999999999999999999999999998 47899999999998765
Q ss_pred CCC-CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC---------
Q 008547 254 PGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR--------- 321 (562)
Q Consensus 254 ~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------- 321 (562)
... ......+++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+.........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 332 2233456888999998864 3588999999999999999999999888777666655442111000
Q ss_pred ----------CC-------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 322 ----------KP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 322 ----------~~-------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.. .+.+++++.+||.+||.+||++|||+.+++.||||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 00 123578899999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=331.25 Aligned_cols=256 Identities=27% Similarity=0.466 Sum_probs=214.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|++.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.+ +||||+++++.+.++...|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence 468889999999999999999999999999998865432 23557788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 81 MEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCC
Confidence 999999999988742 4689999999999999999999999999999999999998 4778999999999765433
Q ss_pred CC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. .....++..|+|||++.+ ..+.++|+|||||++|+|++|..||...........+....+ ......++..+.+
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKE 231 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHH
Confidence 22 233468889999998765 458899999999999999999999987765554444332221 1222356788999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
++.+||..+|++||++.++++||||.....
T Consensus 232 li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 232 FIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred HHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 999999999999999999999999987653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=346.01 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=204.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|++.+.||+|+||.||+|.+..+| ..||+|++..... ......+.+|+.+++.+.+||||+++++++...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 47999999999999999999865444 5799999865432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc----------------------------------------------------------
Q 008547 171 YVYIAMELCEGGELLDRILAKK---------------------------------------------------------- 192 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 192 (562)
.+++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999998875321
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc---c
Q 008547 193 ----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---Q 259 (562)
Q Consensus 193 ----------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~---~ 259 (562)
..++++..++.++.||+.||.|||++||+||||||+|||++ +++.+||+|||++......... .
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeecc
Confidence 12478889999999999999999999999999999999998 4788999999999765433221 1
Q ss_pred cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHH
Q 008547 260 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 337 (562)
...+++.|+|||++.. .++.++|||||||++|+|++ |+.||...........+......... ...+++++.+++.+
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 350 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMKM 350 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHHH
Confidence 2335667999998754 56899999999999999997 99999876655555454443322222 13468999999999
Q ss_pred cCccCccCCCCHHHHhc
Q 008547 338 LLVKDPRARLTAAQALS 354 (562)
Q Consensus 338 ~l~~dP~~Rps~~~~l~ 354 (562)
||..||.+||++.++++
T Consensus 351 cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 351 CWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999874
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=327.65 Aligned_cols=254 Identities=28% Similarity=0.442 Sum_probs=208.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc---CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM---ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+|.+.+.||.|+||.||+|.+ .+|+.+|+|.+..... ........+.+|+.+++.+ +||||+++++++.+.+.++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence 478899999999999999985 5788999998864322 1223346688999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+|+||+|+||+++ .++.++|+|||++....
T Consensus 79 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 79 IFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLA 153 (265)
T ss_pred EEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhHhhh
Confidence 99999999999988843 35689999999999999999999999999999999999998 47889999999987542
Q ss_pred CC-------CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 254 PG-------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 254 ~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
.. .......|++.|+|||++.+. .+.++||||||+++|+|++|..||...........+....... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~ 232 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM-PRLPD 232 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC-CCCCC
Confidence 11 112345689999999998654 5789999999999999999999997765544443333321111 11224
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.++.++.++|.+||..+|.+||++.++++||||
T Consensus 233 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 233 SFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 578999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=326.86 Aligned_cols=254 Identities=28% Similarity=0.490 Sum_probs=206.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~ 172 (562)
.|.+.+.||+|+||.||+|.+..+|..||+|++...... .......+.+|+.+++.+. ||||+++++.+.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEE
Confidence 588999999999999999999999999999988654321 2234567889999999995 9999999998875 4678
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++++||+++++|.+.+.. ...+++..+..++.||+.||.|||+.+|+||||+|+||+++ .++.+||+|||++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCcccc
Confidence 999999999999988843 34689999999999999999999999999999999999998 4778999999998755
Q ss_pred CCC----CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 253 KPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 253 ~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... .......++..|+|||.+.+. ++.++|||||||++|+|++|+.||.................. ......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~ 234 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN--PQLPSHI 234 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC--CCCchhc
Confidence 321 112235688999999988654 588999999999999999999999776555444444332211 1111346
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
++.+.+++ +||..+|++||++.++++||||+
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 78889999 67778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=334.64 Aligned_cols=255 Identities=27% Similarity=0.477 Sum_probs=209.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... ....+.+.+|+.+++.+ +||||+++++++..++..|+|+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEE
Confidence 689999999999999999999989999999988654332 23456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++++|..... ....+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 80 EFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred ecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeeeeccCCc
Confidence 9999887766542 234589999999999999999999999999999999999998 4789999999998765433
Q ss_pred CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC--------------
Q 008547 256 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------------- 319 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------- 319 (562)
.......++..|+|||++.+ ..+.++||||||+++|+|++|++||......+....+......+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 22334578899999998764 34788999999999999999999997665544333332211000
Q ss_pred -----C--------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 320 -----R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 320 -----~--------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+ ...++.++..+.+|+.+||..+|.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0 01134678899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=342.65 Aligned_cols=258 Identities=29% Similarity=0.490 Sum_probs=224.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
-|..++.||-|+||+|.++....|...||+|.+.+...........+..|-.||..- +.+.||+||..|++.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 478899999999999999998899999999999988777777888999999999988 6999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC---
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--- 253 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~--- 253 (562)
+|++||++..+|++. +-+.+..++.++.++.+|+++.|..|+|||||||+||||| .+|++||+||||+.-+.
T Consensus 709 dYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCceeeeeccccccceecc
Confidence 999999999998655 6799999999999999999999999999999999999999 58999999999985321
Q ss_pred ------CCCC----------------------------------cccccCCCcccCchhcc-cCCCCCcchHHHHHHHHH
Q 008547 254 ------PGKK----------------------------------FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYI 292 (562)
Q Consensus 254 ------~~~~----------------------------------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~e 292 (562)
.+.. ....+||+.|+|||++. .+++.-||+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 1100 01258999999999875 467888999999999999
Q ss_pred HHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCC---CHHHHhcCcccccc
Q 008547 293 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 361 (562)
Q Consensus 293 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rp---s~~~~l~hp~f~~~ 361 (562)
|+.|++||...+..+...+++.....+......++++++.++|.++.+ +++.|+ .++++..||||+..
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI 934 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence 999999999888877777776655445555567899999999999876 789998 57789999999864
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=340.56 Aligned_cols=261 Identities=30% Similarity=0.483 Sum_probs=208.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4568999999999999999999999999999999986422 2234566788999999995 99999999887643
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...|+|+||+.+ +|...+. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||+
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~ 152 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TNCDLKICDFGL 152 (336)
T ss_pred cceEEEEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEECcccc
Confidence 358999999964 7777662 35699999999999999999999999999999999999998 578999999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh--------
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------- 314 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-------- 314 (562)
+........ .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 876533221 234578999999998643 458899999999999999999999977654332222211
Q ss_pred ---------------CCCCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 315 ---------------NKPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 315 ---------------~~~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
..+..... ..+.+++++.++|.+||+.+|++|||+.++++||||+.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 00000000 124567889999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=324.17 Aligned_cols=255 Identities=32% Similarity=0.533 Sum_probs=211.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... ....+.+.+|+.+++.+ +||||+++++.+...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 588999999999999999999889999999998765432 34678899999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 79 EYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred ecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCC
Confidence 99999999998743 34588999999999999999999999999999999999998 47889999999987654322
Q ss_pred C-----cccccCCCcccCchhcccC----CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 257 K-----FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 257 ~-----~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
. .....+++.|+|||++.+. .+.++||||||+++|+|++|+.||.....................+.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQL 233 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCccccc
Confidence 2 1235688999999998653 478899999999999999999999765332222222222222222333456
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
++.+.++|.+||+.+|.+||++.+++.|||+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 8999999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=329.56 Aligned_cols=258 Identities=24% Similarity=0.336 Sum_probs=207.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.+..+|+.||||.+...... .....+..|+.++.+..+||||+++++++..++.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 589999999999999999999999999999998754321 233456667776545447999999999999999999999
Q ss_pred eccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 177 ELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 177 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||++ |+|.+.+... ....+++..+..++.||+.||.|||++ +++||||||+||+++ .++.+||+|||++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecccccccc
Confidence 9996 5777766432 335689999999999999999999997 999999999999998 47899999999998654
Q ss_pred CCCCcccccCCCcccCchhccc-----CCCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCCCCCCCCCCCC
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.........++..|+|||++.+ .++.++|+|||||++|+|++|+.||.... ..+.+..+..... ...+...+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS--PQLPAEKF 233 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--CCCCcccc
Confidence 3333334578899999998753 34788999999999999999999996532 2233333333211 11112347
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
|.++.++|.+||..+|.+||++.+++.||||+...
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 89999999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=328.31 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=208.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC---chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
.|+..+.||+|+||.||+|.+..+|+.||+|++...... .......+.+|+.+++.+. ||||+++++++.+.+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 378889999999999999999999999999998644321 1224578899999999995 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+++++|.+.+.. ...+++..+..++.||+.||.|||++|++|+||+|+||+++. ....+||+|||++....
T Consensus 80 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIADFGAAARLA 155 (268)
T ss_pred EEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEcccccccccc
Confidence 99999999999988743 357899999999999999999999999999999999999974 23469999999987654
Q ss_pred CCCC-----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC-CCCCCCCCC
Q 008547 254 PGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-DFRRKPWPS 326 (562)
Q Consensus 254 ~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~ 326 (562)
.... .....+|..|+|||.+.+ .++.++||||||+++|+|++|..||...........+..... .......+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEH 235 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchh
Confidence 3211 123468899999998765 458899999999999999999999965443332222222111 111112235
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
+++++.+++.+||..+|.+||++.++++||||+
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 788999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=291.79 Aligned_cols=259 Identities=27% Similarity=0.476 Sum_probs=218.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|...++||+|.||+||+|+++.+++.||+|.+...... ........+|+.+|+.|. |.|||+++++...+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd-egvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 466778999999999999999999999999998765432 234466789999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
|||.. +|..++ ..-++.+..+.++.++.|++.||.++|++++.||||||.|.||+ .+|.+||+|||+|+-..-..
T Consensus 81 e~cdq-dlkkyf-dslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 81 EFCDQ-DLKKYF-DSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---RNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HHhhH-HHHHHH-HhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---cCCcEEecccchhhhcCCce
Confidence 99965 666655 34567899999999999999999999999999999999999998 58999999999998765333
Q ss_pred -CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC------
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS------ 326 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------ 326 (562)
-+...+.|.+|++|.++.+. +++..|+||.|||+.|+.. |++.|.+.+..+.+..+...-.......||.
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 34455789999999998774 5888999999999999987 8999999999888888876444333444433
Q ss_pred -------------------CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 -------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 -------------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++..-++++.++|.-+|.+|++++.+++||||....
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 233467999999999999999999999999998653
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=344.46 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=203.8
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|++.+.||+|+||.||+|.+ ..++..||+|++..... ....+.+.+|+.+++.+.+||||+++++++...+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4799999999999999999964 34567899999864432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc----------------------------------------------------------
Q 008547 171 YVYIAMELCEGGELLDRILAKK---------------------------------------------------------- 192 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 192 (562)
..++||||+++|+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999998885432
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC
Q 008547 193 ---------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257 (562)
Q Consensus 193 ---------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~ 257 (562)
...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCccc
Confidence 12478889999999999999999999999999999999998 477899999999976543222
Q ss_pred c---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 258 F---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 258 ~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. ....++..|+|||++.+ .++.++|||||||++|+|++ |..||..........+......... .....+.++.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 347 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAPSEMY 347 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCCHHHH
Confidence 1 12334667999998865 46889999999999999998 8999977665544444444332211 1234678999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+|+.+||..||++||++.++++
T Consensus 348 ~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 348 DIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred HHHHHHccCChhHCcCHHHHHH
Confidence 9999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=324.89 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=212.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+++.+|+|++..... .....+.+|+.+++.+ +||||+++++++.....+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence 479999999999999999999999999999999875432 2557889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++... ...+++..+..++.|++.||.|||++||+|+||+|+||+++ .++.+||+|||++......
T Consensus 79 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 79 MEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhh
Confidence 9999999998877433 35789999999999999999999999999999999999998 4788999999998765432
Q ss_pred C-CcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCCCH
Q 008547 256 K-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISN 329 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 329 (562)
. ......++..|+|||.+.+ ..+.++||||||+++|+|++|..||...........+......... ...+.++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence 2 2344578899999998754 3578899999999999999999999877655544444333211111 11234578
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
++.+||.+||..+|.+||++.+++.|||
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=327.23 Aligned_cols=247 Identities=25% Similarity=0.432 Sum_probs=198.4
Q ss_pred ceeeccee--eccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 97 RYTIGKLL--GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~l--G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.|.+.+.+ |.|+||.||++.++.+|..+|+|.+....... .|+.+...+.+||||+++++.+...+.+|+
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 45666655 99999999999999999999999986543211 133333334469999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC-CeEEeeccCccccC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFIK 253 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~-~vkl~DfG~a~~~~ 253 (562)
||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++ .++|+|||++....
T Consensus 87 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CCCeEEEecCccceecC
Confidence 99999999999988543 48999999999999999999999999999999999999984 44 89999999987654
Q ss_pred CCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHH-HHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF-KEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. ....+++.|+|||++.+ .++.++||||||+++|+|++|+.||......... ..+.... ......++.+++.+
T Consensus 162 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (267)
T PHA03390 162 TP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNA 237 (267)
T ss_pred CC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHH
Confidence 32 23468899999999865 4588899999999999999999999755443321 1221111 12223334689999
Q ss_pred HHHHHHcCccCccCCCC-HHHHhcCccccc
Q 008547 332 KDFVKKLLVKDPRARLT-AAQALSHPWVRE 360 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps-~~~~l~hp~f~~ 360 (562)
.+||.+||+.+|.+||+ ++++|+||||+.
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 99999999999999996 599999999973
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=309.13 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=202.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----CC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-----DN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-----~~ 170 (562)
+||+|.+.||.|||+.||++....++..||+|++.+.. ....+..++|++..+++ +|||+++++++... ..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCce
Confidence 58999999999999999999999999999999998765 34678899999999999 59999999887653 33
Q ss_pred eEEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeec
Q 008547 171 YVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
..||+++|+..|+|.+.+... ++..+++.+++.|+.+|++||++||+.. ++||||||.|||+. +.+.++|+||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEec
Confidence 599999999999999988543 3457999999999999999999999998 99999999999998 4789999999
Q ss_pred cCccccCCC----CC---c---ccccCCCcccCchhcccC----CCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHH
Q 008547 247 GLSDFIKPG----KK---F---QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFK 310 (562)
Q Consensus 247 G~a~~~~~~----~~---~---~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~ 310 (562)
|.+....-. .. . ..-..|..|+|||.+.-+ .+.++|||||||+||.|+.|..||...-. ..+.-
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL 253 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL 253 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence 998754211 11 0 112458889999998643 38899999999999999999999943211 11111
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+..+...++.. +.+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 254 Av~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 254 AVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 222333333333 2388999999999999999999999999853
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=324.75 Aligned_cols=252 Identities=29% Similarity=0.515 Sum_probs=211.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..++..||+|.+.... ..+.+.+|+.+++.+ +||||+++++.+.....+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence 47999999999999999999998889999999986542 267889999999999 699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++++|.+.+.. ....+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 77 MEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccC
Confidence 999999999987743 345789999999999999999999999999999999999998 4778999999998876543
Q ss_pred C-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
. ......++..|+|||++.+. .+.++||||||+++|+|++|+.||...........+...... .....+.++..+.+
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWSPEFND 231 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcCHHHHH
Confidence 3 22345688999999988654 578999999999999999999999776554433333222111 11112346789999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccc
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+|.+||..||++|||+.++|.||||
T Consensus 232 ~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 232 FVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=323.92 Aligned_cols=255 Identities=27% Similarity=0.499 Sum_probs=207.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccc--cCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK--MILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~ 171 (562)
..|.+.+.||+|+||.||+|.+..+|..||||.+.... .........+.+|+.+++.+ .||||+++++++.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 36899999999999999999999999999999875432 11223456888999999999 59999999998876 356
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+|+||||+||+++ .++.++|+|||++..
T Consensus 81 ~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccc
Confidence 8899999999999988743 35688999999999999999999999999999999999998 478899999999875
Q ss_pred cCCC----CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPG----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
.... .......|+..|+|||++.+ ..+.++|||||||++|+|++|+.||...........+...... ....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 233 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPH 233 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchh
Confidence 4321 12234568899999998755 4588999999999999999999999776555444444332211 111235
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
++..+.++|.+||. +|++||++.++++|||+.
T Consensus 234 ~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 234 VSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 67889999999995 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=329.72 Aligned_cols=255 Identities=27% Similarity=0.444 Sum_probs=203.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.+ +||||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEE
Confidence 4799999999999999999999989999999998654321 1234567899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+.+ +|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 82 FEYLDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVP 156 (291)
T ss_pred EecCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccccccCCC
Confidence 999975 8988775433 4789999999999999999999999999999999999998 4788999999998754321
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCCC-------------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPD------------- 318 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~------------- 318 (562)
.......+++.|+|||++.+ .++.++||||||+++|+|++|+.||.+.. ..+....+......
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 12223457889999998764 35788999999999999999999997655 22222222110000
Q ss_pred ------CC-------CCCCCCCC--HHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 ------FR-------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ------~~-------~~~~~~~~--~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+. ...++.++ ..+.+++.+||+.+|.+|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00112344 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=322.61 Aligned_cols=250 Identities=28% Similarity=0.507 Sum_probs=213.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ....+.+.+|+.+++.+ +||||+++++.+.+++.+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 48899999999999999999999999999999865432 23557788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.......+++..+..++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEcccCcceeecccc
Confidence 999999999988665566789999999999999999999999999999999999998 47889999999987654322
Q ss_pred -CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......|++.|+|||++.+. .+.++|+||||+++|+|++|..||...+.......+..+.... ....++..+.+|
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP---LPSHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC---CCcccCHHHHHH
Confidence 22345789999999998654 5889999999999999999999998877666666665543321 123578899999
Q ss_pred HHHcCccCccCCCCHHHHhcC
Q 008547 335 VKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~h 355 (562)
|.+||..||++||++.+++.-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=333.05 Aligned_cols=256 Identities=29% Similarity=0.451 Sum_probs=208.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~ 173 (562)
+.|.+.+.||.|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++++. ||||+++++++... +..|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 3689999999999999999999999999999998754432 223345678999999995 99999999998877 8999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+.+ +|.+.+... ...+++..++.++.||+.||.|||++|++|+||||+||+++ .++.+||+|||++....
T Consensus 83 lv~e~~~~-~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 83 MVMEYVEH-DLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAREYG 157 (293)
T ss_pred EEehhcCc-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCceeecc
Confidence 99999974 888876443 24689999999999999999999999999999999999998 47899999999988654
Q ss_pred CC-CCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC-----------
Q 008547 254 PG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----------- 319 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------- 319 (562)
.. .......+++.|+|||.+.+. .+.++||||||+++|+|++|.+||...........+.......
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 43 233345678999999988653 4789999999999999999999998776655554443211100
Q ss_pred ---------------CCCCCCC--CCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 320 ---------------RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 320 ---------------~~~~~~~--~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
....++. +++.+.++|.+||..+|++|||+.++|.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0011222 47889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=332.66 Aligned_cols=260 Identities=32% Similarity=0.564 Sum_probs=215.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.+ +||||+++++.+..++..|+|
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEE
Confidence 45666678999999999999999999999999886432 23456788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|+|||++......
T Consensus 98 ~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 98 MEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred EeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhhcccc
Confidence 99999999988763 24689999999999999999999999999999999999998 4688999999998754322
Q ss_pred C-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 K-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
. ......|++.|+|||.+.+ ..+.++||||||+++|+|++|+.||...........+...... .......++..+.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 250 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-RVKDSHKVSSVLRG 250 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-ccccccccCHHHHH
Confidence 2 2234578999999998865 4588999999999999999999999877665555544432221 11112347889999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccCCCCC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~ 366 (562)
++.+||..||.+|||+.++++||||+.....+.
T Consensus 251 li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 251 FLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred HHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 999999999999999999999999997665443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=327.62 Aligned_cols=255 Identities=28% Similarity=0.443 Sum_probs=211.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+++++.+. ||||+++++.+...+.+++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 57888999999999999999999999999999876532 245677889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||+++++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHH
Confidence 9999999998875433 678999999999999999999999 9999999999999998 4788999999998765432
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC-----hhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
... ...++..|+|||.+.+ .++.++||||||+++|+|++|..||.... .......+...... ..+...++.
T Consensus 155 ~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (265)
T cd06605 155 LAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--RLPSGKFSP 231 (265)
T ss_pred Hhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--CCChhhcCH
Confidence 222 2678899999998765 45889999999999999999999996542 22233333332211 111112788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++.++|.+||..||++|||+.+++.||||+.+
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 99999999999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=360.53 Aligned_cols=255 Identities=28% Similarity=0.410 Sum_probs=206.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.+. ||||+++++++.+++..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 47999999999999999999999999999999987654444455678999999999994 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 176 MELCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
|||++||+|.+.+.... ...++...+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCCEEEEec
Confidence 99999999998875321 12356677889999999999999999999999999999998 4788999999
Q ss_pred cCccccCCCC-------------------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh
Q 008547 247 GLSDFIKPGK-------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED 306 (562)
Q Consensus 247 G~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~ 306 (562)
|++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9997652110 01235799999999988654 588999999999999999999999775543
Q ss_pred hHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 307 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..........+ ....++..+|+.+.+++.+||..||++||+..+.+.+
T Consensus 238 ki~~~~~i~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 238 KISYRDVILSP-IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhhhhccCh-hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33222111111 1112335688999999999999999999877666543
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=330.61 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=214.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
....+|.+.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~ 90 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTA 90 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeE
Confidence 3446799999999999999999999989999999998655444444556788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|+||+. |+|.+.+.. ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.++|+|||++...
T Consensus 91 ~lv~e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 91 WLVMEYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLV 165 (307)
T ss_pred EEEHHhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcceec
Confidence 99999997 577766643 335689999999999999999999999999999999999998 5789999999998765
Q ss_pred CCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
... ....+++.|+|||++. +.++.++||||||+++|+|++|..||.+.........+..... +......++
T Consensus 166 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 240 (307)
T cd06607 166 SPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLSSNDWS 240 (307)
T ss_pred CCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CCCCchhhC
Confidence 432 2456889999999873 3457899999999999999999999987766555444433321 111112467
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+.++|.+||..+|++||++.+++.||||....
T Consensus 241 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 241 DYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 8899999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=338.20 Aligned_cols=263 Identities=30% Similarity=0.458 Sum_probs=210.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||.|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheecccccc
Confidence 34689999999999999999999999999999999865422 222345677899999999 599999999987644
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..+|+|+||+. ++|.+.+. ....+++..+..++.||+.||.|||+++++||||||+||+++ .++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~ 154 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGL 154 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcc
Confidence 35899999995 68888774 346799999999999999999999999999999999999998 478899999999
Q ss_pred ccccCCC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh-----------
Q 008547 249 SDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------- 314 (562)
Q Consensus 249 a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~----------- 314 (562)
+...... .......+|..|+|||.+.. ..+.++|||||||++|+|++|++||.+.+.......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 155 ARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 9865433 22334578899999998753 468899999999999999999999976543322222111
Q ss_pred ------------CCCCCC----CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 315 ------------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 315 ------------~~~~~~----~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
...... ...++.+++++.+||.+||+.+|++|||+.++++||||......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 000000 01135688999999999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=338.93 Aligned_cols=260 Identities=28% Similarity=0.448 Sum_probs=208.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence 34689999999999999999999999999999999865422 223456677899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...|+||||+. ++|.+.+.. .++...+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg 163 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 163 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCc
Confidence 35799999996 488877632 288999999999999999999999999999999999998 47889999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC----------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---------- 316 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~---------- 316 (562)
++.............+|+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 164 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred cceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9987654444445678999999998765 45889999999999999999999997766544333332110
Q ss_pred ------------CCCCCC---------C--------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 317 ------------PDFRRK---------P--------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 317 ------------~~~~~~---------~--------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+..... . ....++.+.++|.+||..||++|||+.++|.||||+.-..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 000000 0 1124567899999999999999999999999999985433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=323.13 Aligned_cols=255 Identities=27% Similarity=0.519 Sum_probs=215.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||+|.++.+|..||+|.+...... ....+.+.+|+.+++.+ +||||+++++.+......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 488999999999999999999999999999998664322 23456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.......+++..+..++.||+.||.|||+.+++|+||||+||+++. +...+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccchhccCCc
Confidence 9999999999886655556899999999999999999999999999999999999984 33467999999987664433
Q ss_pred C-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 K-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
. .....|++.|+|||++.. ..+.++|+||||+++++|++|..||...........+...... ...+.++.++.++
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 233 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA---PISPNFSRDLRSL 233 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC---CCCCCCCHHHHHH
Confidence 2 223468899999998754 4688999999999999999999999877666665555443321 2224578899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
|.+||..+|++|||+.++++||||
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=321.32 Aligned_cols=254 Identities=31% Similarity=0.494 Sum_probs=212.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
+|+..+.||+|+||.||+|.+..++..||+|.+..... ........+.+|+.+++.+ +||||+++++++.....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence 47788999999999999999988999999998865332 1233557789999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+||+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 80 FLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceeccc
Confidence 9999999999988743 35689999999999999999999999999999999999998 478999999999877654
Q ss_pred CCCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
........|++.|+|||.+... .+.++|+||||+++|+|++|+.||...........+.... . .....+.+++.+.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 232 (258)
T cd06632 155 FSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-E-LPPIPDHLSDEAK 232 (258)
T ss_pred cccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-c-CCCcCCCcCHHHH
Confidence 4434456789999999987543 5889999999999999999999997766444444433311 1 1122345789999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+++.+||..+|.+||++.+++.|||+
T Consensus 233 ~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 233 DFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=330.37 Aligned_cols=252 Identities=22% Similarity=0.275 Sum_probs=201.0
Q ss_pred cceeecceeeccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i 159 (562)
.+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++.++ +||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCe
Confidence 579999999999999999997532 34579999886542 233556789999999999 59999
Q ss_pred ceEEEEEEcCCeEEEEEeccCCCChHHHHHhhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 008547 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-----------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222 (562)
Q Consensus 160 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiH 222 (562)
+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999998874321 124678889999999999999999999999
Q ss_pred ccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh--C
Q 008547 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--G 296 (562)
Q Consensus 223 rDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~--g 296 (562)
|||||+|||++ .++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ +
T Consensus 162 ~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 162 RDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred cCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999998 478999999999976543322 123455788999998754 56889999999999999986 6
Q ss_pred CCCCCCCChhhHHHHHHh---CC-CCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 297 RRPFWDKTEDGIFKEVLR---NK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 297 ~~pf~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
..||...........+.. .. ........+.++..+.+|+.+||..||.+|||+.++.
T Consensus 239 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 239 EQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 678877666555444322 11 1111112245788999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-43 Score=341.04 Aligned_cols=258 Identities=28% Similarity=0.479 Sum_probs=233.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
...+++..||-||||.|=++........+|+|++++.........+.+..|-+||...+ .|+||++|-.|.+..++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 35677889999999999999766555569999999888777778899999999999996 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||-|-||+|+..+. ..+.+....++.++..+++|++|||++|||+|||||+|.+|+ .+|-+||.|||+|+.+..+
T Consensus 499 mEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 499 MEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCceEEeehhhHHHhccC
Confidence 99999999999884 457899999999999999999999999999999999999999 5899999999999999999
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
..++++||||.|.|||++.. +...++|.||||+++|||++|.+||.+.+...++..|+++...+..+ ..++..+.+|
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~L 651 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDL 651 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHH
Confidence 99999999999999997654 56899999999999999999999999999999999999987554433 3588999999
Q ss_pred HHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
|+++...+|.+|.. +.+|.+|.||...
T Consensus 652 ik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 652 IKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 99999999999995 8999999999864
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=323.89 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=206.3
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+|++.+.||+|+||.||+|.+. ..+..||+|.+.... .......+.+|+.+++.+ +||||+++++++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence 46999999999999999999765 446689999987543 233456789999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++ .++.++|+|||.+...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCcccccc
Confidence 9999999999998887543 35789999999999999999999999999999999999998 4789999999987654
Q ss_pred CCCCCcc--cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
....... ...++..|+|||++.+ .++.++|||||||++|++++ |..||++....+....+..+.. .+..+.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~ 234 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR---LPAPRNCP 234 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC---CCCCCCCC
Confidence 3222111 2345678999998754 56889999999999999775 9999998887777666654432 22235688
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+.+++.+||..+|.+||++.++++
T Consensus 235 ~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 235 NLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=325.57 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=200.0
Q ss_pred eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHc--cCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.||.|+||.||+|.+..+|+.||+|.+.+...........+..|..+++.+ .+||+|+.+++++...+.+++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765433222223344454443332 259999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCccc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~ 260 (562)
||+|..++. ....+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+||+|||++...... ....
T Consensus 81 g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~-~~~~ 154 (278)
T cd05606 81 GGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKK-KPHA 154 (278)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCcc-CCcC
Confidence 999988774 345799999999999999999999999999999999999998 4788999999998765432 2234
Q ss_pred ccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCCh---hhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 261 IVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
.+|+..|+|||++.+ .++.++||||+|+++|+|++|+.||..... ........... ...+..++.++.+++
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~li 230 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA----VELPDSFSPELRSLL 230 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC----CCCCCcCCHHHHHHH
Confidence 579999999999864 358899999999999999999999976532 22222222211 112235689999999
Q ss_pred HHcCccCccCCC-----CHHHHhcCccccccC
Q 008547 336 KKLLVKDPRARL-----TAAQALSHPWVREGG 362 (562)
Q Consensus 336 ~~~l~~dP~~Rp-----s~~~~l~hp~f~~~~ 362 (562)
.+||..+|.+|| ++.++++||||+...
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 231 EGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred HHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 999999999999 999999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=323.20 Aligned_cols=253 Identities=27% Similarity=0.467 Sum_probs=208.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+++.||||.+.............+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEE
Confidence 4699999999999999999999999999999988764444455667789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||+++|+|.+.+.. .....+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 999999999887743 2335589999999999999999999999999999999999998 47789999999987654
Q ss_pred CCCC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....|++.|+|||.+.+ ..+.++|+||||+++|+|++|+.||..... ......+... .++..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC--DYPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC--CCCCCChhhcCH
Confidence 3222 224578899999998765 458889999999999999999999965432 2333333222 122222235778
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++|.+||..+|.+||++.++++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHH
Confidence 8999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=321.41 Aligned_cols=254 Identities=28% Similarity=0.502 Sum_probs=214.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cCCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~~~~~l 174 (562)
+|.+.+.||.|+||.||+|.+..+|..||+|.+..... .....+.+.+|+.+++.+. ||||+++++++. .+..+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 48899999999999999999999999999998865433 3345677889999999995 999999999775 4567899
Q ss_pred EEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH-----HcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 175 AMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH-----~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
+|||+++++|.+.+... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++ .++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccc
Confidence 99999999999887542 2467899999999999999999999 89999999999999998 47899999999
Q ss_pred CccccCCCCC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 248 LSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 248 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
++........ .....+++.|+|||++.+. .+.++|+||||+++|+|++|..||...........+...... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR---RIPY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCC---CCcc
Confidence 9987654433 3456789999999988654 578899999999999999999999887766666555544321 1123
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.++..+.+++.+||..+|.+||++.++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 578899999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=328.94 Aligned_cols=255 Identities=33% Similarity=0.540 Sum_probs=207.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+. ||||+++++++..++..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 69999999999999999999999999999998865432 2234577899999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||++++.+.. +.. ....+++..+..++.||+.||.|||++|++|+||+|+||+++ +++.+||+|||++.......
T Consensus 80 e~~~~~~l~~-~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 80 EYVERTLLEL-LEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARP 154 (288)
T ss_pred ecCCCCHHHH-HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccccCCCc
Confidence 9998755544 332 335689999999999999999999999999999999999998 47899999999998765443
Q ss_pred --CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC--------------CC
Q 008547 257 --KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------------PD 318 (562)
Q Consensus 257 --~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------------~~ 318 (562)
......++..|+|||++.+. ++.++||||||+++|+|++|++||.+....+....+.... ..
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 33456788999999987654 4789999999999999999999997765544333322110 00
Q ss_pred C-----CCC--------CCC-CCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 F-----RRK--------PWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ~-----~~~--------~~~-~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+ ... .++ .++.++.+||.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 000 011 247889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=352.32 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=213.7
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
......+.||+|+||+||+|.-.. .-..||||.++... ..+...+|++|++++..| +|||||+|+|+|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCC
Confidence 356678899999999999996432 23579999987654 355789999999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------CC----CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------DS----RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------~~----~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~ 238 (562)
.+|||+|||..|+|.++|.... +. +++..+.+.|+.||+.|++||-++.+|||||-.+|+||+ ++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---EN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---cc
Confidence 9999999999999999986432 12 388999999999999999999999999999999999998 68
Q ss_pred CCeEEeeccCccccCCCCCccc---ccCCCcccCchhc-ccCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHH
Q 008547 239 SSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~~~~~~---~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~ 313 (562)
..|||+|||+++.+-....+.. ..-..+|||||.+ .++++++|||||+||+|||+++ |+.||.+.+..++++.+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 9999999999998754443321 2235689999965 6788999999999999999998 999999999999999998
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
.+.. ... ..+.|.++.+||..||+.+|++||++.+|-
T Consensus 720 ~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 720 AGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 8775 332 257899999999999999999999999983
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=339.50 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=209.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+...++..||+|.||+||+|.|- | .||||++.-... .+...+.|++|+.++++-+ |-||+-+.|+|..... .|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AI 464 (678)
T ss_pred HHHhhccceeccccccceeecccc--c-ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-ee
Confidence 346778999999999999999765 3 599999876543 4558899999999999996 9999999999998887 99
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc--
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-- 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-- 252 (562)
|+.+|+|-+|+.++...+ ..+.....+.|++||+.|+.|||.++|||||||..||+|. ++++|||+|||++..-
T Consensus 465 iTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~---~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH---EDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc---cCCcEEEecccceeeeee
Confidence 999999999999886444 5688999999999999999999999999999999999998 4699999999998542
Q ss_pred -CCCCCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCC
Q 008547 253 -KPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPS 326 (562)
Q Consensus 253 -~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~ 326 (562)
....-.....|...|||||++.. .+++.+||||||||+|||++|..||.....+.++-.+-++....+. ....+
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~ 620 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSN 620 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhcc
Confidence 12223344567889999999864 4588999999999999999999999977777777666555332222 12245
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++++|+..||.+++++||...+||.
T Consensus 621 ~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 621 CPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred CHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 7789999999999999999999999885
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=316.50 Aligned_cols=257 Identities=23% Similarity=0.451 Sum_probs=224.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.++..||+|+|++|.++++++|.+.+|+|+++++-.........++.|-.+..+-++||++|.+..+|+.+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 36999999999999999999999999999999999888777778888999999999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc-cCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~-~~~ 254 (562)
.||++||+|.-++ ++...++++.++.+...|+.||.|||+.|||+||||.+||||+ ..+++||+|+|+++. +.+
T Consensus 330 ieyv~ggdlmfhm--qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld---aeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 330 IEYVNGGDLMFHM--QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEecCcceeeeh--hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc---cCCceeecccchhhcCCCC
Confidence 9999999998777 4557899999999999999999999999999999999999999 479999999999975 567
Q ss_pred CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCC-------CChhhH-HHHHHhCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD-------KTEDGI-FKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~-------~~~~~~-~~~~~~~~~~~~~~~~~ 325 (562)
+..+.++||||.|.|||++.+. |+..+|+|+||++++||+.|+.||.- .+.++. ++-++......+ .
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqirip----r 480 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP----R 480 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccc----c
Confidence 7788899999999999999874 69999999999999999999999942 222333 333443332222 2
Q ss_pred CCCHHHHHHHHHcCccCccCCC------CHHHHhcCcccccc
Q 008547 326 SISNSAKDFVKKLLVKDPRARL------TAAQALSHPWVREG 361 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rp------s~~~~l~hp~f~~~ 361 (562)
.++-.+..+++..|+.||.+|. ...++..||||+..
T Consensus 481 slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 481 SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 4667788999999999999997 57899999999853
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=326.88 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=209.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|++.+.||.|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+++.+ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCC
Confidence 36899999999999999999876555 679999886442 234556789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 171 YVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
..|++|||+++++|.+++..... ..+++..+..++.||+.||.|||++|++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~--- 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG--- 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---
Confidence 99999999999999998854321 4578899999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCC---CcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHH
Q 008547 237 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~ 311 (562)
+++.++|+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+....
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 47889999999987653322 123346688999999875 456889999999999999998 9999998887777766
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+....... ....+|+++.+|+.+||+.||.+||++.+++++
T Consensus 239 i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 239 IRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 65543221 224688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=327.89 Aligned_cols=255 Identities=29% Similarity=0.473 Sum_probs=208.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|++.+.||.|++|.||+|.++.+|..||+|++...... ......+.+|+.+++.+. ||||+++++++.+++..|+|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 67788999999999999999999999999998754322 223456788999999994 9999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|++ ++|.+++.......+++..+..++.||+.||.|||+++++||||+|+||+++ .++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc
Confidence 995 6898887555445789999999999999999999999999999999999998 47899999999987653222
Q ss_pred CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC-----------------
Q 008547 257 KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------------- 317 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~----------------- 317 (562)
......+++.|+|||++.+. ++.++||||||+++|+|++|.+||...........+.....
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 22334678899999987653 47889999999999999999999987665444333322110
Q ss_pred ----CC----CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 318 ----DF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 318 ----~~----~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.. .....+.++..+.++|.+||+.||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 011134577899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=321.72 Aligned_cols=248 Identities=22% Similarity=0.316 Sum_probs=209.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEE
Confidence 35889999999999999999999999999999886542 2456788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++ +++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCccccccccc
Confidence 9999999999988665556789999999999999999999999999999999999998 5788999999999765433
Q ss_pred CCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... ....+++.|+|||.+.+ ..+.++|||||||++|+|++ |..||.+....+....+..... ......++.++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 234 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---MERPEGCPPKV 234 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHH
Confidence 221 12234568999998764 45889999999999999998 9999988777766666654321 22224678999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..||++||++.++++
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=330.49 Aligned_cols=256 Identities=29% Similarity=0.440 Sum_probs=201.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~----- 170 (562)
++|.+.+.||.|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.+ .||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccC
Confidence 3699999999999999999999999999999988644321 12234567899999999 5999999999887543
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..++||||+.+ +|.+.+.. ....+++..+..++.||+.||.|||++|++|+||||+||+++ .++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg 164 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFG 164 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEECcCC
Confidence 46999999964 78776643 334689999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCCC-----CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
++....... ......++..|+|||.+.+. .+.++||||||+++|+|++|+.||.+.........+......++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 997653322 12234678899999987653 47899999999999999999999977665444333322111111
Q ss_pred CCCC----------------------------CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 RKPW----------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 ~~~~----------------------------~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
...+ ...+..+.+||.+||..||.+|||+.++|+||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 1100 0124667899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=336.56 Aligned_cols=259 Identities=32% Similarity=0.497 Sum_probs=208.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+..+|.+.+.||.|+||.||+|.+..+|+.||+|++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhccccccc
Confidence 34689999999999999999999999999999999865432 3456788999999999 599999999766543
Q ss_pred ----------CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 170 ----------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 170 ----------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
...|+|+||+. ++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+||+++. .+.
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~ 152 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDL 152 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCc
Confidence 36899999997 58877663 246899999999999999999999999999999999999974 456
Q ss_pred CeEEeeccCccccCCCCC----cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 008547 240 SLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 313 (562)
.+||+|||++........ .....++..|+|||++.. .++.++|||||||++|+|++|+.||.+.........+.
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 799999999876532211 123367889999998653 35789999999999999999999998776655444443
Q ss_pred hCCCCC----------------------CC----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 314 RNKPDF----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 314 ~~~~~~----------------------~~----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...+.. .. ...+.++.++.+||.+||..||.+|||+.+++.||||+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 321100 00 01235788999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=326.48 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=212.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++.+.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 46899999999999999999999999999999876442 233567889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||+++++|...+.. .+.+++..+..++.+++.||.|||+ .+++||||+|+||+++ +++.++|+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 82 MEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSGELIN 156 (284)
T ss_pred EecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCcccchhh
Confidence 999999999887743 3578999999999999999999997 6999999999999998 578899999999865432
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-----------hHHHHHHhCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-----------GIFKEVLRNKPDFRRK 322 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~~ 322 (562)
. .....+|+..|+|||++.+ ..+.++|||||||++|+|++|+.||...... +....+..... +..
T Consensus 157 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 233 (284)
T cd06620 157 S-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRL 233 (284)
T ss_pred h-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCC
Confidence 2 2234578999999998754 5688999999999999999999999765432 22223322211 111
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
+...++.++.+|+.+||..||.+||++.++++||||......
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~ 275 (284)
T cd06620 234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRA 275 (284)
T ss_pred CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 122377899999999999999999999999999999876543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=332.92 Aligned_cols=260 Identities=29% Similarity=0.479 Sum_probs=203.9
Q ss_pred ceeecceeeccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~ 172 (562)
+|.+.+.||+|+||.||+|.+.. ++..||+|.+.............+.+|+.+++.+ +||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceE
Confidence 48899999999999999999988 8999999998764322223446678899999999 599999999999988 889
Q ss_pred EEEEeccCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc-CCCCCCeEEeeccC
Q 008547 173 YIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGL 248 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~-~~~~~~vkl~DfG~ 248 (562)
++||||+++ +|.+.+.... ...+++..+..++.||+.||.|||+.+|+||||||+||+++. ...++.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999965 7776664322 236899999999999999999999999999999999999984 12278899999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh---------HHHHHH
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---------IFKEVL 313 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------~~~~~~ 313 (562)
+........ .....+|+.|+|||++.+ .++.++|||||||++|+|++|++||.+..... .+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 886543221 234578899999998765 35789999999999999999999997554322 111111
Q ss_pred hCC--------------C-------CCCCCCCC------------CCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 314 RNK--------------P-------DFRRKPWP------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 314 ~~~--------------~-------~~~~~~~~------------~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
... + .......+ ..+..+.+++.+||..||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 00011111 456789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=323.43 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=213.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
-|++.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.+ +||||+++++++..+...|+||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEE
Confidence 47888999999999999999988999999998764432 23456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|..++. ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 82 EYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccch
Confidence 9999999988773 24689999999999999999999999999999999999998 47889999999987654322
Q ss_pred C-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 K-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
. .....++..|+|||.+.+ ..+.++|+|||||++|+|++|..||...........+...... .....++.++.++
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 232 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEF 232 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHH
Confidence 1 223568899999998765 4578899999999999999999999776655555444333211 1123578899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+.+||..+|.+||++.++++||||.+..
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 233 VEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 9999999999999999999999999854
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=329.56 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=204.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCE--EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..|++.+.||+|+||.||+|.+..+|.. +|+|.+... ........+.+|+.++.++.+||||+++++++...+.+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 3689999999999999999998887764 566665432 223455678899999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 174 IAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCC
Confidence 9999999999999885432 23578999999999999999999999999999999999998 478
Q ss_pred CeEEeeccCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC
Q 008547 240 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
.+||+|||++.............++..|+|||.+.+. ++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~- 240 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY- 240 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-
Confidence 8999999998643221111122346679999987654 5889999999999999998 999998777766665553321
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....+..+++++.+|+.+||..+|++||++.+++.+
T Consensus 241 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 --RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223578899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=323.97 Aligned_cols=256 Identities=28% Similarity=0.507 Sum_probs=212.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEcCCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~~~~~~l 174 (562)
.|++.+.||.|+||.||+|.+..+|+.||+|.+.... .......+.+|+.+++.+. .||||+++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4788899999999999999999999999999886542 2234567889999999995 49999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.. ..+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 80 IMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCC
Confidence 9999999999887732 3789999999999999999999999999999999999998 478899999999877654
Q ss_pred CCC-cccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 255 GKK-FQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 255 ~~~-~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... .....|+..|+|||.+.+. ++.++|+||||+++|+|++|..||...........+.... .+......++.++
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLL 231 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHH
Confidence 332 2345789999999987643 4789999999999999999999997665544333222221 1111122378899
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+++.+||..||.+||++.+++.||||++..
T Consensus 232 ~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 232 REFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=325.90 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=202.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||+|+||.||+|.+..+|..||+|.+..... ......+.+|+.+++.+ +|+||+++++++..+...|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999865432 12334567899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+. ++|.+.+... ...+++..+..++.||+.||.|||+.||+|+||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 82 FEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIP 156 (291)
T ss_pred Eeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCC
Confidence 99995 6887776543 35678889999999999999999999999999999999998 4788999999998754322
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhC--------------CC
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN--------------KP 317 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~--------------~~ 317 (562)
.......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+.... +.+..+... .+
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 22334567899999998865 3578899999999999999999999765432 222221110 00
Q ss_pred CCCCC------------CCC--CCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 318 DFRRK------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 318 ~~~~~------------~~~--~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.+... .|. ..+..+.+++.+||..||.+|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000 011 125678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=320.41 Aligned_cols=254 Identities=28% Similarity=0.462 Sum_probs=215.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||.|++|.||+|.+..+|+.||+|++..... +.....+.+|+.++..+. ||||+++++++...+.+++|+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 58899999999999999999999999999999876532 145678999999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .|++|+||+|+||+++ .++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKVLENT 153 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCccceecccC
Confidence 999999999988543 678999999999999999999999 9999999999999998 4789999999998876543
Q ss_pred CCc-ccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC---hhhHHHHHHhCCCCCCCCCCCC-CCH
Q 008547 256 KKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPS-ISN 329 (562)
Q Consensus 256 ~~~-~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~ 329 (562)
... ....++..|+|||.+... ++.++|+||||+++|+|++|..||.... ..+....+..... ...... ++.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 230 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP---PSLPAEEFSP 230 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC---CCCCcccCCH
Confidence 332 245788999999987654 5789999999999999999999997763 3334444433221 111123 788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+.++|.+||..+|++||++.++++||||+..
T Consensus 231 ~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 99999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=333.85 Aligned_cols=263 Identities=25% Similarity=0.409 Sum_probs=210.4
Q ss_pred cccceee-cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------hHHHHHHHHHHHHHccCCCCcce
Q 008547 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------AVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 94 ~~~~y~i-~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
+..+|.. .+.||.|+||.||+|.+..+|+.||||++......... ....+.+|+.+++.+ +||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence 4456764 57899999999999999999999999998654322100 112477899999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 162 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+++++..++..++||||+. |+|.+.+. ....+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~ 158 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGIC 158 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCE
Confidence 9999999999999999996 58888774 335689999999999999999999999999999999999998 47899
Q ss_pred EEeeccCccccCC---------------CCCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCC
Q 008547 242 KATDFGLSDFIKP---------------GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKT 304 (562)
Q Consensus 242 kl~DfG~a~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~ 304 (562)
+|+|||++..... ........+++.|+|||.+.+. .+.++|||||||++|+|++|.+||.+..
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999876541 1112234568899999988653 4789999999999999999999998877
Q ss_pred hhhHHHHHHhCCCCCCCC------------------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 305 EDGIFKEVLRNKPDFRRK------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
..+.+..+.......... ..+..+.++.++|.+||..+|++||++.++|.||||+.
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 239 EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence 666555443311111100 01345788999999999999999999999999999997
Q ss_pred cCC
Q 008547 361 GGD 363 (562)
Q Consensus 361 ~~~ 363 (562)
...
T Consensus 319 ~~~ 321 (335)
T PTZ00024 319 DPL 321 (335)
T ss_pred CCC
Confidence 653
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=325.68 Aligned_cols=255 Identities=25% Similarity=0.481 Sum_probs=208.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|++|.||+|.+..+|..||||++..... ......+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEE
Confidence 48899999999999999999999999999999875432 22345677899999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||+++ +|.+++.... ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhhcCC
Confidence 99975 8888774432 24689999999999999999999999999999999999998 4788999999998765332
Q ss_pred C-CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC--------------C
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--------------D 318 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------------~ 318 (562)
. ......+|+.|+|||++.+. ++.++||||||+++|+|++|..||.+.+..+....+..... .
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 2 22345678999999987553 47889999999999999999999987776655554432210 0
Q ss_pred CCCC-----------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 FRRK-----------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 ~~~~-----------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+... ..+.++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0000 012457789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=328.49 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=212.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.+ +||||+++++.+..++..|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence 458888999999999999999999999999998865432 23456789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++++|.+.+. ...+++..+..++.||+.||.|||++|++|+||+|+||+++ +++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 81 MEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCc
Confidence 99999999988773 25689999999999999999999999999999999999998 4788999999998765433
Q ss_pred CC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. .....++..|+|||.+.+. ++.++|||||||++|+|++|+.||...........+..... ......++.++.+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP---PTLEGQYSKPFKE 231 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC---CCCCcccCHHHHH
Confidence 22 2234688999999988654 57899999999999999999999976655444433322221 1111346788999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+||..+|.+||++.++++||||+...
T Consensus 232 li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 232 FVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred HHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 99999999999999999999999998653
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=326.33 Aligned_cols=253 Identities=35% Similarity=0.662 Sum_probs=216.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++++.+||||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 68999999999999999999999999999999876544444456778899999999955999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCcc
Confidence 99999999998843 35799999999999999999999999999999999999998 47889999999987654322
Q ss_pred ---------------------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh
Q 008547 257 ---------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 257 ---------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 314 (562)
......++..|+|||++... .+.++||||||++++++++|+.||........+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 236 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILK 236 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 11234678899999987654 57889999999999999999999988776666666654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCH----HHHhcCccc
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWV 358 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~----~~~l~hp~f 358 (562)
....++ +.+++.+.+||.+||+.+|.+||++ .++++||||
T Consensus 237 ~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 237 LEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred cCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 333222 3568999999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=321.87 Aligned_cols=256 Identities=31% Similarity=0.566 Sum_probs=213.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|...+.||.|++|.||++.+..+++.||+|++.... ....+.+.+|+.+++.+ +||||+++++++...+..++|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence 3455578999999999999999999999999885432 23446688999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.. ..+++..+..++.||+.||.|||++||+||||+|+||+++ .++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 96 EFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred eccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchhhccCC
Confidence 99999999988743 5689999999999999999999999999999999999998 57899999999886543322
Q ss_pred -CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 -KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+......... ....++..+.++
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l 248 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKVSPRLRSF 248 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccCCHHHHHH
Confidence 2233568999999998865 4588999999999999999999999877766666655544322111 123478899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
|.+||..+|++||++.++++||||+...+
T Consensus 249 i~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 249 LDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHHHcccChhhCcCHHHHccCcccccCCC
Confidence 99999999999999999999999998664
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=323.88 Aligned_cols=256 Identities=28% Similarity=0.426 Sum_probs=209.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEcCCe----
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNY---- 171 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~~~~---- 171 (562)
|++.+.||.|+||.||+|.++.+++.||+|++...... ......+.+|+.+++++. +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 67889999999999999999888999999998654322 223455678888887774 59999999999987776
Q ss_pred -EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 172 -VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 172 -~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
++++|||+.+ +|.+++.......+++..+..++.||+.||.|||+.+++|+||+|+||+++ .++.+||+|||++.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcce
Confidence 9999999975 888877654445689999999999999999999999999999999999998 46899999999997
Q ss_pred ccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC-----------
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD----------- 318 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----------- 318 (562)
............+++.|+|||++.+ ..+.++|||||||++|+|++|.+||.+....+.+..+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 7654444445568899999998865 4588999999999999999999999888776666655432110
Q ss_pred -----CCC-------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 319 -----FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 319 -----~~~-------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.. ...+.+++.+.++|.+||..||.+||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000 0012456788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=337.74 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=203.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+++++..||||+++++++...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 35799999999999999999986433 3469999986542 2334577899999999995599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc---------------------------------------------------------
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------------------------------------------------------- 192 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 192 (562)
+.+|||||||++|+|.+++....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999998875431
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC
Q 008547 193 -------------------------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235 (562)
Q Consensus 193 -------------------------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~ 235 (562)
...+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~-- 271 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA-- 271 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe--
Confidence 12478888999999999999999999999999999999998
Q ss_pred CCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHH
Q 008547 236 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 310 (562)
Q Consensus 236 ~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~ 310 (562)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||..........
T Consensus 272 -~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 272 -QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred -CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 477899999999976533221 223456788999998755 46889999999999999997 999998765544443
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......... .....++.++.+++.+||..||++||++.++.+
T Consensus 351 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 351 NKIKSGYRM--AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHhcCCCC--CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 333332221 222467899999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=327.40 Aligned_cols=255 Identities=30% Similarity=0.543 Sum_probs=213.0
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.....||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++.+..++..|+|+|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEe
Confidence 4455679999999999999999999999999865432 2346688999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|+++++|...+.. ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 99 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 99 FLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred cCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcccccc
Confidence 9999999886632 4689999999999999999999999999999999999998 57899999999987554322
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
......|++.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+..... .....+..++..+.++|
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i 251 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKLKNAHKISPVLRDFL 251 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC-CCccccCCCCHHHHHHH
Confidence 2234578999999998865 458899999999999999999999987766555554433322 22223456788999999
Q ss_pred HHcCccCccCCCCHHHHhcCccccccCC
Q 008547 336 KKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 336 ~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||..+|.+||++.++++||||.....
T Consensus 252 ~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 252 ERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 9999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=335.27 Aligned_cols=263 Identities=32% Similarity=0.509 Sum_probs=210.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE----cCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~----~~~ 170 (562)
..+|.+.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+. ||||+++++++. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 3579999999999999999999999999999999865422 2234567788999999995 999999998875 345
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+|+||+. ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 82 ~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~ 155 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMAR 155 (334)
T ss_pred eEEEEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEecccccce
Confidence 7899999995 58888773 345699999999999999999999999999999999999998 57899999999987
Q ss_pred ccCCCCC-----cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh---------
Q 008547 251 FIKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 314 (562)
Q Consensus 251 ~~~~~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--------- 314 (562)
....... .....|+..|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 6532211 124578999999998754 358899999999999999999999977654333222111
Q ss_pred --------------CCCCCCCCC----CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 315 --------------NKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 315 --------------~~~~~~~~~----~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
......... ++.++.++.++|.+||+.+|.+||++.+++.||||.......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD 304 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence 111111111 245788999999999999999999999999999998765433
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=353.73 Aligned_cols=265 Identities=21% Similarity=0.265 Sum_probs=195.8
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCC-CEEEEE--------------EecccccCchhhHHHHHHHHHHHHHccCC
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVK--------------KIEKNKMILPIAVEDVKREVKILQALAGH 156 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~-~~vaiK--------------~~~~~~~~~~~~~~~~~~E~~~l~~l~~h 156 (562)
..+..+|++++.||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+|+.+ +|
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NH 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CC
Confidence 345678999999999999999998754322 222222 11111111223456688999999999 59
Q ss_pred CCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEec
Q 008547 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233 (562)
Q Consensus 157 p~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~ 233 (562)
|||+++++++...+..|+|++++. ++|..++.... ........++.++.||+.||.|||++|||||||||+|||++
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN 301 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 999999999999999999999995 57777764332 12344677889999999999999999999999999999998
Q ss_pred cCCCCCCeEEeeccCccccCCCCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC---hhh
Q 008547 234 SAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDG 307 (562)
Q Consensus 234 ~~~~~~~vkl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~ 307 (562)
.++.+||+|||++..+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..++.... ...
T Consensus 302 ---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 302 ---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 478999999999987654322 234689999999999865 46889999999999999999876543322 112
Q ss_pred HHHHHHhCCC----CCCC----------------C--------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 308 IFKEVLRNKP----DFRR----------------K--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 308 ~~~~~~~~~~----~~~~----------------~--------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
.+.+++.... .++. . ....++..+.++|.+||.+||.+|||+.++|.||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 2222221110 0000 0 0012566788899999999999999999999999998
Q ss_pred cc
Q 008547 360 EG 361 (562)
Q Consensus 360 ~~ 361 (562)
..
T Consensus 459 ~~ 460 (501)
T PHA03210 459 AE 460 (501)
T ss_pred cC
Confidence 65
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=333.85 Aligned_cols=254 Identities=26% Similarity=0.359 Sum_probs=199.8
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN- 170 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~- 170 (562)
..+++.|.-...||+|+||.||+|.. .+|..||||++....... ..+|.+|+.++.+++ |||+|+|+|||.+.+
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~ 145 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPNLVKLLGYCLEGGE 145 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcCcccEEEEEecCCc
Confidence 44566788888999999999999984 445899999886654311 455999999999996 999999999999988
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+||+||+++|+|.+++.......++|.....|+.+++.||+|||... ||||||||+||||| ++..+||+|||
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD---~~~~aKlsDFG 222 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD---EDFNAKLSDFG 222 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC---CCCCEEccCcc
Confidence 5999999999999999996554338899999999999999999999854 99999999999999 68999999999
Q ss_pred CccccCC-CCCcccc-cCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHhCCCCCCCCC---hh---hHHHHHHhCC--
Q 008547 248 LSDFIKP-GKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT---ED---GIFKEVLRNK-- 316 (562)
Q Consensus 248 ~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~---~~~~~~~~~~-- 316 (562)
+|+.... .....+. .||.+|+|||.+. +..+.++||||||++|+||++|+.|..... .. +.....+...
T Consensus 223 La~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~ 302 (361)
T KOG1187|consen 223 LAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKL 302 (361)
T ss_pred CcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcch
Confidence 9976654 3333333 8999999999885 567999999999999999999998886432 11 1111122211
Q ss_pred CCCCCCCC--CCCC--H---HHHHHHHHcCccCccCCCCHHHHh
Q 008547 317 PDFRRKPW--PSIS--N---SAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 317 ~~~~~~~~--~~~~--~---~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
.++..+.. ...+ . .+..+..+|+..+|..||++.+++
T Consensus 303 ~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 303 REIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred hheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 11111111 1222 2 256788999999999999999974
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=322.01 Aligned_cols=260 Identities=29% Similarity=0.442 Sum_probs=208.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~~l 174 (562)
+|...+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.+ +||||+++++++.. .+.+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEE
Confidence 58899999999999999999999999999998875432 23557789999999999 59999999998864 447899
Q ss_pred EEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 175 AMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||||+++++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeeccccccc
Confidence 9999999999887643 2345689999999999999999999999999999999999998 4678999999998755
Q ss_pred CCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCC-----hhhHHHHHHhCCC-CCCCCCC-
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLRNKP-DFRRKPW- 324 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~-~~~~~~~- 324 (562)
.... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+....+..... .......
T Consensus 156 ~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 156 VNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred cccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 4322 224567889999998764 45889999999999999999999997652 2233333332111 1111111
Q ss_pred -CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 325 -PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 325 -~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
...++.+.+||.+||..+|.+|||+.+++.||||+....
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 124678999999999999999999999999999976543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-40 Score=325.95 Aligned_cols=261 Identities=28% Similarity=0.493 Sum_probs=215.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||.|+||.||+|.+..++..||+|.+..... ...+.+.+|+.+++.+. ||||+++++.+...+..|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEEE
Confidence 589999999999999999999888999999999864322 24567889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred EecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceeccccc
Confidence 999999999988743 3578999999999999999999999999999999999998 4678999999988765433
Q ss_pred CC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. .....+++.|+|||.+.. ..+.++||||||+++|++++|+.||...........+..... .....+..++..+.+
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 247 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRD 247 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccCHHHHH
Confidence 22 234568899999998754 458899999999999999999999977655433333222211 111123346788999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccCCCCCC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~ 367 (562)
+|.+||..+|++||++.+++.||||+........
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~ 281 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSL 281 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCHHHhcCcccccc
Confidence 9999999999999999999999999987654443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=324.71 Aligned_cols=254 Identities=31% Similarity=0.501 Sum_probs=209.6
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~lv 175 (562)
|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ........+.+|+.+++.+. |||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678899999999999999999999999999987653 22334567889999999995 99999999999988 899999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+++ +|.+.+... ...+++..+..++.||+.||.|||+.|++|+||+|+||+++ +++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 79 FEYMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLARPYTKR 153 (287)
T ss_pred eccccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccceeeccCC
Confidence 999975 888776433 25789999999999999999999999999999999999998 5789999999999766443
Q ss_pred C--CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC-------
Q 008547 256 K--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW------- 324 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------- 324 (562)
. ......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...........+...........|
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 2 2334467889999998754 3588999999999999999999999887776665555442211111111
Q ss_pred -------------------CC-CCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 325 -------------------PS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 325 -------------------~~-~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.. +++.+.+++.+||..+|.+||++.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11 27889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=318.88 Aligned_cols=248 Identities=27% Similarity=0.440 Sum_probs=201.1
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
..||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++ ||||+++++++..++..++|+||+++
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecCCC
Confidence 47999999999999999999999999886543 235567899999999994 99999999999999999999999999
Q ss_pred CChHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-Cc
Q 008547 182 GELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KF 258 (562)
Q Consensus 182 g~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-~~ 258 (562)
++|.+.+.... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ..+.++|+|||++....... ..
T Consensus 90 ~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 90 GSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCcc
Confidence 99998875432 344 78889999999999999999999999999999999974 35789999999987653322 22
Q ss_pred ccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhH-HHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 259 QDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 259 ~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....|++.|+|||.+... ++.++||||||+++|+|++|+.||........ ....... .........+++++.+|
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 244 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF--KIHPEIPESLSAEAKNF 244 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh--ccCCCCCcccCHHHHHH
Confidence 334688999999987542 57899999999999999999999965433211 1111100 11111123578899999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.+||..+|.+|||+.+++.||||
T Consensus 245 i~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 245 ILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=320.94 Aligned_cols=253 Identities=28% Similarity=0.485 Sum_probs=207.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||.|+||.||+|.+..+|..||||.+.............+.+|+.+++.+ +||||+++++++..++..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEE
Confidence 3688999999999999999999999999999988754443444567888999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|||+++++|.+.+.. .....+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhccc
Confidence 999999999887753 2235689999999999999999999999999999999999998 47789999999987654
Q ss_pred CCCC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh--hHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....+++.|+|||++.+ ..+.++||||||+++|+|++|..||.+.... .....+... .++..++..+++
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--CCCCCCcccccH
Confidence 3322 234578999999998865 4578899999999999999999999755432 222233221 122223345788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.+++.+||..||.+|||+.++++
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=324.44 Aligned_cols=257 Identities=27% Similarity=0.519 Sum_probs=210.2
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.|++.+.||.|+||.||+|.+. .+|..||+|++...... .....+.+.+|+.+++.+.+||||+.+++.+..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3788999999999999999874 47899999998654321 1234467789999999997799999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++||||+|+|||++ .++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceec
Confidence 999999999999998854 35688999999999999999999999999999999999998 4789999999998765
Q ss_pred CCCC--CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCCh----hhHHHHHHhCCCCCCCCC
Q 008547 253 KPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 253 ~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~ 323 (562)
.... ......|+..|+|||.+.. ..+.++||||||+++|+|++|..||..... ..+...+....+.+
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 231 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---- 231 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----
Confidence 4322 2234568999999998764 347789999999999999999999964332 22333333332222
Q ss_pred CCCCCHHHHHHHHHcCccCccCCC-----CHHHHhcCccccccC
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 362 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~~ 362 (562)
.+.+++.+.+++.+||..||.+|| ++.+++.||||+...
T Consensus 232 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 232 PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 235788999999999999999997 899999999998753
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=321.20 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=207.9
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.+..
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence 468999999999999999999877 77889999876432 233456789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 171 YVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++..+....+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999998854432 2588999999999999999999999999999999999998644456799999
Q ss_pred ccCccccCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 246 FGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 246 fG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
||++......... .....+..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-- 240 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL-- 240 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--
Confidence 9999865322111 12233567999998754 56899999999999999997 99999887776666555443221
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.....++..+.+++.+||..+|++||++.++++|
T Consensus 241 -~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 -DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1124578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=318.14 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=207.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.++||.|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.+ +||||+++++.+...+..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEE
Confidence 47999999999999999999864 56679999876533 2356789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.||+.||.|||+.+++||||||+||+++ .++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceecCCC
Confidence 9999999999988766666789999999999999999999999999999999999998 4788999999999765432
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....++..|+|||++.+ .++.++|||||||++|+|++ |..||...........+.... ..+....++.++
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 233 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---RMPRMENCPDEL 233 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHH
Confidence 21 122345678999998764 45788999999999999998 999998877766666665442 222335688999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..+|++||++.++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=339.19 Aligned_cols=248 Identities=33% Similarity=0.521 Sum_probs=211.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+...|.+...+|.|+|+.|-.+.+..+++..++|++.+... ...+|+.++....+||||+++.+++.++.+.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCcee
Confidence 356789999999999999999999999999999999977632 2346887888888999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|||++.|+.|.+.+..+. ... ..+..|+.+|+.|+.|||++|||||||||+|||++ +..++++|+|||.++..
T Consensus 392 ~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhC
Confidence 99999999999998885443 223 77888999999999999999999999999999995 25789999999999877
Q ss_pred CCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... ..+.+-|..|.|||++.. +++.+|||||||++||+|++|+.||...... ++...+..+. +. ..+|.+
T Consensus 467 ~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~--~s----~~vS~~ 538 (612)
T KOG0603|consen 467 ERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK--FS----ECVSDE 538 (612)
T ss_pred chh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc--cc----cccCHH
Confidence 654 445678999999999875 5699999999999999999999999777665 3333333222 11 468999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+++||..||+.||.+||++.+++.||||-.
T Consensus 539 AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 539 AKDLLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred HHHHHHHhccCChhhCcChhhhccCcchhc
Confidence 999999999999999999999999999943
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=320.65 Aligned_cols=249 Identities=34% Similarity=0.571 Sum_probs=211.8
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||.|+||.||+|.+..+|+.||+|.+.............+.+|+.+++++. ||||+++++.+..+...|+|+||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999999999999987654433456678899999999995 9999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-------
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------- 256 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~------- 256 (562)
|.+.+... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 80 LASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCcccccccc
Confidence 98887443 4789999999999999999999999999999999999998 47889999999987543321
Q ss_pred --CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 257 --KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 257 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
......+++.|+|||.+.. ..+.++||||||+++|+|++|..||......+....+......++. ...++..+.+
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--DVEVSDEAID 232 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc--cccCCHHHHH
Confidence 2234568889999998755 3578999999999999999999999888877777776654433222 1235899999
Q ss_pred HHHHcCccCccCCCCH---HHHhcCccccc
Q 008547 334 FVKKLLVKDPRARLTA---AQALSHPWVRE 360 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~---~~~l~hp~f~~ 360 (562)
++.+||+.+|.+||++ .++|+||||+.
T Consensus 233 ~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 233 LISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 9999999999999999 99999999975
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=331.55 Aligned_cols=253 Identities=25% Similarity=0.337 Sum_probs=202.5
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-C
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~ 169 (562)
++|++.+.||.|+||.||+|.+. .+++.||+|++.... .......+.+|+.+++++.+||||+++++++.. +
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 47999999999999999999643 345789999886432 123446678999999999669999999998764 5
Q ss_pred CeEEEEEeccCCCChHHHHHhhcC--------------------------------------------------------
Q 008547 170 NYVYIAMELCEGGELLDRILAKKD-------------------------------------------------------- 193 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------------- 193 (562)
..+++++||+++++|.+.+.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 678999999999999988754321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcc
Q 008547 194 ---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYY 267 (562)
Q Consensus 194 ---~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y 267 (562)
..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+..... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 2688999999999999999999999999999999999998 477899999999987543221 1234556789
Q ss_pred cCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccC
Q 008547 268 VAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 345 (562)
Q Consensus 268 ~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 345 (562)
+|||++.+ .++.++|||||||++|+|++ |..||.+....+.+...+....... .....++++.+++.+||+.+|++
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~ 319 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR--APEYATPEIYSIMLDCWHNNPED 319 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC--CCccCCHHHHHHHHHHccCChhh
Confidence 99998754 56889999999999999998 9999987655444444443322111 12356789999999999999999
Q ss_pred CCCHHHHhcC
Q 008547 346 RLTAAQALSH 355 (562)
Q Consensus 346 Rps~~~~l~h 355 (562)
||++.++++|
T Consensus 320 RPs~~ell~~ 329 (337)
T cd05054 320 RPTFSELVEI 329 (337)
T ss_pred CcCHHHHHHH
Confidence 9999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=335.46 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=210.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC---E-EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD---R-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~---~-vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
+..+.++||+|+||+||+|..+..+. . ||+|..............++++|+++++.| +|||||++||++.....+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCcc
Confidence 45567999999999999998766533 3 899988764444566889999999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++|||+|.||+|.++|.... ..++..+...++.+.+.||+|||++++|||||-.+|+|++ .+..+||+|||+|+..
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCccccccCC
Confidence 99999999999999996543 2699999999999999999999999999999999999998 4567899999999865
Q ss_pred CCCCCcc-cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 253 KPGKKFQ-DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 253 ~~~~~~~-~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
....... ...-...|+|||.+.. .+++++|||||||++||+++ |..||.+....++...+.......+ ..+..|.
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~--~~~~~p~ 390 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP--IPSKTPK 390 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC--CCCCCHH
Confidence 4211111 1124568999999864 56899999999999999998 8999999999999999966543322 2246788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++..++.+||..+|++||++.++.+
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHH
Confidence 8999999999999999999999864
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=331.48 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=202.8
Q ss_pred ceeecc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 102 KLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 102 ~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
..||+| +||+||++.+..+|+.||+|++...... ....+.+.+|+.+++.+ +||||++++++|..++..++|+||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 456666 9999999999999999999998754332 33457889999999988 5999999999999999999999999
Q ss_pred CCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-CC-
Q 008547 180 EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KK- 257 (562)
Q Consensus 180 ~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~-~~- 257 (562)
.+++|.+.+.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.++++|||.+...... ..
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCccc
Confidence 999999888655445689999999999999999999999999999999999998 4678999999864322111 00
Q ss_pred ------cccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC--------
Q 008547 258 ------FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-------- 320 (562)
Q Consensus 258 ------~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 320 (562)
.....++..|+|||++.+. ++.++|||||||++|+|++|+.||...................+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 0112346679999998653 57899999999999999999999977665444433332211100
Q ss_pred -----------------------------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 -----------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 -----------------------------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
......+++.+.+||++||+.||++|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 001123567799999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=331.10 Aligned_cols=259 Identities=31% Similarity=0.508 Sum_probs=211.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
+.++|++.+.||.|+||.||+|.+..+|..||||++.... ........+.+|+.+++.+ +||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence 4568999999999999999999999999999999886432 2233456788999999999 5999999999887553
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+++||||+ +++|...+. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg 163 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFG 163 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecc
Confidence 468999998 778877663 35689999999999999999999999999999999999998 47889999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC-------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------- 318 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~------- 318 (562)
++..... ......+++.|+|||.+.+ ..+.++|+||||+++|+|++|+.||.+......+..+......
T Consensus 164 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 164 LARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred ccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9976543 2234567899999998864 3578899999999999999999999876654444443321110
Q ss_pred ----------------CC----CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 319 ----------------FR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 319 ----------------~~----~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+. ...++.+++.+.++|.+||..||.+|||+.+++.||||+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 0123467888999999999999999999999999999997644
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=325.29 Aligned_cols=260 Identities=27% Similarity=0.452 Sum_probs=217.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
......|...+.||+|+||.||+|.+..+|..||+|++.............+.+|+.+++.+ +|||++++++++..+..
T Consensus 21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 99 (317)
T cd06635 21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHT 99 (317)
T ss_pred CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCe
Confidence 34445688999999999999999999999999999998765444445567789999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+.| +|.+.+... ...+++..+..++.||+.||.|||++||+||||+|+||+++ .++.+||+|||++..
T Consensus 100 ~~lv~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~~ 174 (317)
T cd06635 100 AWLVMEYCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASI 174 (317)
T ss_pred EEEEEeCCCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCccc
Confidence 9999999975 777766433 45689999999999999999999999999999999999998 478899999999875
Q ss_pred cCCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... .....|++.|+|||.+. +..+.++|||||||++|+|++|+.||...........+...... ......+
T Consensus 175 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~ 249 (317)
T cd06635 175 ASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--TLQSNEW 249 (317)
T ss_pred cCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC--CCCCccc
Confidence 432 23447889999999863 34588999999999999999999999887666666665554322 1122357
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+.+|+.+||..+|.+||++.++++|||+....
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 78899999999999999999999999999997654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=316.35 Aligned_cols=245 Identities=24% Similarity=0.396 Sum_probs=204.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEE
Confidence 5889999999999999999865 456799998764432 345788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++|+|.+.+.... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 79 EFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCc
Confidence 9999999998875433 4689999999999999999999999999999999999998 47889999999987654322
Q ss_pred Cc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 257 KF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 257 ~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.. ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||...+..+....+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVY 231 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHH
Confidence 21 12234568999998864 45889999999999999999 99999888877777777665432221 23678899
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..+|.+||++.++++
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=314.55 Aligned_cols=254 Identities=30% Similarity=0.533 Sum_probs=217.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|+||.||++.+..++..||+|++..... .......+.+|+++++.+. |||++++++.+......++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48899999999999999999999999999999876543 2345667889999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 177 ELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||+++++|.+.+.... ...+++..+..++.+|+.||.|||+.|++|+||+|+||+++ .++.++|+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeeccc
Confidence 9999999998886543 46799999999999999999999999999999999999998 478899999999876544
Q ss_pred CC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.. ......|++.|+|||.+.+ ..+.++|+||+|+++++|++|..||................... ....++..+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP---IPSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC---CCCCCCHHHH
Confidence 32 2334578999999998755 45889999999999999999999998877766666665543221 1135788999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+++.+||..+|.+||++.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=321.99 Aligned_cols=250 Identities=23% Similarity=0.350 Sum_probs=208.5
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||+|+||.||+|.+.. ++..||+|.+..... ......+.+|+++++.+ .||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNF-QHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence 468899999999999999998643 467899998865432 23457889999999999 4999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~ 238 (562)
..++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++ .+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---YD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---CC
Confidence 9999999999999999885432 24578899999999999999999999999999999999998 47
Q ss_pred CCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHH
Q 008547 239 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~ 313 (562)
+.+||+|||++........ .....+++.|+|||++.+ .+++++|||||||++|+|++ |..||......+....+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 8999999999876533221 123346788999998765 45889999999999999998 999998888777777766
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+..... ...++..+.+++.+||..||.+||++.++++
T Consensus 239 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 239 QGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5443222 2457899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=324.75 Aligned_cols=274 Identities=29% Similarity=0.459 Sum_probs=223.7
Q ss_pred cccccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch----hhHHHHHHHHHHHHHccCCCCcce
Q 008547 86 TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP----IAVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 86 ~~~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----~~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
..|.....++++|.++.+||+|||++||+|.+...+++||||+-..++.+.. .......+|.+|-+.| +||.||+
T Consensus 453 SQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVK 531 (775)
T KOG1151|consen 453 SQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVK 531 (775)
T ss_pred hhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeee
Confidence 3455556678899999999999999999999999999999998765544433 2345678999999999 6999999
Q ss_pred EEEEEE-cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeccCCCC
Q 008547 162 FYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKED 238 (562)
Q Consensus 162 l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~iiHrDlkp~NIll~~~~~~ 238 (562)
+|++|. +...+|-|+|||+|.+|.-+|. ....+++..++.|+.||+.||.||.+. .|||-||||.||||.+....
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 999997 6667899999999999887774 446799999999999999999999875 69999999999999877778
Q ss_pred CCeEEeeccCccccCCCCC--------cccccCCCcccCchhccc-----CCCCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 239 SSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
|.+||+|||+++.+..... +....||.||++||+|.- ..+.++||||+|||+|.++.|+.||...-.
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs 689 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS 689 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh
Confidence 8999999999988754321 234579999999998742 237889999999999999999999966533
Q ss_pred -hhHHHH-HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 306 -DGIFKE-VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 306 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++++. .+....+...++-|.++.++++||++||.+--++|....++-.||||..+.
T Consensus 690 QQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 690 QQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred HHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 233322 112222333444567999999999999999999999999999999998753
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=322.87 Aligned_cols=255 Identities=33% Similarity=0.522 Sum_probs=210.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.+.+.||.|+||+||+|....+++.||||.+...... .......+|+..++++.+||||+++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999889999999988654321 1233456799999999559999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~ 257 (562)
|+ +|+|.+.+.......+++..+..++.|++.+|.|||++|++|+||+|+||+++ .++.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccceeccCCCC
Confidence 99 78999888655545789999999999999999999999999999999999998 478999999999987655444
Q ss_pred cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC--------------
Q 008547 258 FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-------------- 321 (562)
Q Consensus 258 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------- 321 (562)
.....++..|+|||++.. ..+.++|+||||+++++|++|++||......+.+..+.........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 455678999999998743 3588999999999999999999999877665554443321110000
Q ss_pred ------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 322 ------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 322 ------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
...+..+..+.++|.+||..+|++||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0112346789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=323.58 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=204.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
++|++.+.||.|+||.||+|.+..++. .+++|.+.... .....+.+.+|+.++.++.+||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 468999999999999999999877765 46888775321 23345678899999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 174 IAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
+|+||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCC
Confidence 9999999999999885432 13588999999999999999999999999999999999998 478
Q ss_pred CeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC
Q 008547 240 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
.+||+|||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.........+.....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 899999999864322111112233557999998765 45889999999999999997 9999988887777776654421
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......++.++.+|+.+||..+|.+||++.++++
T Consensus 237 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 237 ---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1122457899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=323.64 Aligned_cols=258 Identities=28% Similarity=0.439 Sum_probs=214.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..+.|...+.||.|+||.||+|.+..+|..||+|++.............+.+|+.+++.+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 334577788899999999999999999999999998765444444556788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+. |+|.+.+.. ....+++..+..++.||+.||.|||++||+|+||+|+||+++ .++.+||+|||++....
T Consensus 98 lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~ 172 (313)
T cd06633 98 LVMEYCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSS 172 (313)
T ss_pred EEEecCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccC
Confidence 9999996 577776643 345689999999999999999999999999999999999998 47889999999986432
Q ss_pred CCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
......|+..|+|||++. +..+.++|||||||++|+|++|..||...........+..... +....+.++.
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 247 (313)
T cd06633 173 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNEWTD 247 (313)
T ss_pred ---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCH
Confidence 223457899999999873 3457889999999999999999999988766555555544322 2222245678
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+|+.+||+.+|.+||++.+++.||||+...
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 899999999999999999999999999999744
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=314.69 Aligned_cols=254 Identities=28% Similarity=0.494 Sum_probs=209.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccc--cCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--Ce
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK--MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~ 171 (562)
..|.+.+.||+|+||.||+|.+..+|+.||+|.+.... .........+.+|+.+++++ +||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence 36999999999999999999999999999999875321 12234567889999999999 599999999988753 56
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++|+||+++++|.+.+.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++..
T Consensus 81 ~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~ 155 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccc
Confidence 8999999999999988743 34688999999999999999999999999999999999998 477899999999976
Q ss_pred cCCC----CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
.... .......++..|+|||.+.+. .+.++|||||||++|+|++|+.||..........++..... .....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~ 233 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT--KPMLPDG 233 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCC--CCCCCcc
Confidence 5321 122345689999999988654 58899999999999999999999987765555555443221 1222356
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+++.+.++|.+||. +|..||++.+++.|||.
T Consensus 234 ~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 234 VSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred cCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 88999999999999 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=331.68 Aligned_cols=260 Identities=32% Similarity=0.482 Sum_probs=214.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----e
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-----~ 171 (562)
+|++.+.||.|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+ +||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 5899999999999999999999899999999886542 1234556788999999999 5999999999988765 7
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||++ ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..
T Consensus 79 ~~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~ 152 (330)
T cd07834 79 VYIVTELME-TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARG 152 (330)
T ss_pred eEEEecchh-hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEe
Confidence 999999997 47877773 334799999999999999999999999999999999999998 468999999999987
Q ss_pred cCCCC----CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC---
Q 008547 252 IKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK--- 322 (562)
Q Consensus 252 ~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--- 322 (562)
..... ......+|+.|+|||++.+. .+.++||||||+++|+|++|++||.+....+.+..+..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65432 23445789999999998654 5889999999999999999999998887766555554422111100
Q ss_pred ------------------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 323 ------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 323 ------------------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
..+.++..+.++|.+||+++|.+||++.+++.||||+.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 113467889999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=322.36 Aligned_cols=259 Identities=25% Similarity=0.361 Sum_probs=209.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|.+.+.||.|+||.||+|.+..+|+.||||.+..... ......+..|+.++..+.+||||+++++++.+....|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 468999999999999999999998899999999865432 224456677888787776799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||+. ++|.+.+.. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++ .++.+||+|||++.....
T Consensus 93 ~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 93 MELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECccccchhccC
Confidence 99985 466665533 33578999999999999999999997 6999999999999998 478999999999876644
Q ss_pred CCCcccccCCCcccCchhcccC-----CCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHHHhCCCCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
........+++.|+|||.+.+. .+.++||||||+++|+|++|+.||..... .+.+..+....... .+....++
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-LPPNEGFS 246 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-CCCCCCCC
Confidence 3333445678899999988643 57889999999999999999999965432 33444444432211 11112478
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++.+|+.+||..||.+||++.+++.||||+...
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 8999999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=312.68 Aligned_cols=253 Identities=32% Similarity=0.538 Sum_probs=212.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~l 174 (562)
+|.+.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.+++++. ||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 478889999999999999999989999999998765432 345778899999999995 99999999999988 89999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.....
T Consensus 79 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 79 FLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccc
Confidence 99999999999887543 3899999999999999999999999999999999999998 478999999999987655
Q ss_pred CCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 255 GKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 255 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
... .....++..|+|||.+.+. .+.++||||||+++|+|++|..||.... .......+... ... ......++.
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 231 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSS-GEP-PEIPEHLSE 231 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhcccc-CCC-cCCCcccCH
Confidence 443 3456789999999988655 6889999999999999999999997665 22222222211 111 112235688
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.+.+++.+||..+|.+||++.++++||||
T Consensus 232 ~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 232 EAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=328.06 Aligned_cols=259 Identities=29% Similarity=0.427 Sum_probs=206.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----CC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DN 170 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----~~ 170 (562)
+|.+.+.||.|+||.||+|.+..+ +..||+|++..... .......+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 89999998864321 223456778999999999779999999986542 24
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|++++|+. ++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 80 ~~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLAR 153 (332)
T ss_pred cEEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCce
Confidence 6789999985 58888774 346789999999999999999999999999999999999998 47889999999997
Q ss_pred ccCCCC-----CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC------
Q 008547 251 FIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP------ 317 (562)
Q Consensus 251 ~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------ 317 (562)
...... ......||+.|+|||.+.+ ..+.++||||||+++|+|++|.+||...........+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 654321 1234578999999998754 458899999999999999999999977654443333222100
Q ss_pred -----------------CC----CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 -----------------DF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 -----------------~~----~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.. ....++..+..+.+|+.+||+.||.+|||+.+++.||||++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 00 0112345688999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=322.04 Aligned_cols=252 Identities=26% Similarity=0.342 Sum_probs=207.1
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|.+.+.||+|+||.||+|.+ ..++..||+|.+..... ....+.+.+|+.+++++.+||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 4799999999999999999975 33456899998865432 3345678999999999966999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..|+||||+++|+|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++ .++.++|+|||++.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcccc
Confidence 999999999999999988655445589999999999999999999999999999999999998 57789999999997
Q ss_pred ccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 251 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 251 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
....... .....+++.|+|||.+.+ ..+.++|||||||++|+|++ |..||.+................. ....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 267 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM--AQPE 267 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC--CCCC
Confidence 6543221 112345778999998755 45889999999999999998 999998776655555544433221 2223
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..++.+.+|+.+||..+|++||++.++++
T Consensus 268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 57899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=315.07 Aligned_cols=253 Identities=27% Similarity=0.471 Sum_probs=208.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+|+.||+|.+.............+.+|+.+++++ +|+||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 4799999999999999999999989999999988754444445567899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|||+++++|..++... ....+++..+..++.+|+.||.|||+.||+||||+|+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccceeeecc
Confidence 9999999999887532 335689999999999999999999999999999999999998 47889999999987654
Q ss_pred CCCC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ......+..+. +...+.+.++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD--YPPLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC--CCCCChhhcCH
Confidence 3322 234578899999998765 458899999999999999999999965432 22333333222 22222335788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++|.+||..+|++||++.++++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=319.59 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=207.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
..+|.+.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.+ +||||+++++++.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 3579999999999999999997542 34589999876443 223345678999999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+..|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcE
Confidence 99999999999999999885422 13356778899999999999999999999999999999998 47889
Q ss_pred EEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCC
Q 008547 242 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 316 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~ 316 (562)
+|+|||+++....... .....++..|+|||.+.+ ..+.++|||||||++|+|++ |..||.+....+....+....
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876533221 112245678999998764 45889999999999999998 789998877766666555432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc------Ccccccc
Q 008547 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVREG 361 (562)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~------hp~f~~~ 361 (562)
... ....+++.+.+++.+||+.||++|||+.++++ ||||+..
T Consensus 239 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 239 YLD---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 211 11346789999999999999999999999987 8998753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=318.83 Aligned_cols=252 Identities=20% Similarity=0.314 Sum_probs=204.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.+ +||||+++++++..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 4579999999999999999997642 35679999885432 223456688999999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCCE
Confidence 99999999999999998875422 12357788999999999999999999999999999999998 47889
Q ss_pred EEeeccCccccCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCC
Q 008547 242 KATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 316 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~ 316 (562)
+|+|||++......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+.........+....
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG 238 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 99999998765332221 12345778999998865 45889999999999999998 789998877766666555443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
... ....+++.+.+++.+||..||++|||+.+++++
T Consensus 239 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 239 LLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 211 123578899999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=324.28 Aligned_cols=257 Identities=28% Similarity=0.468 Sum_probs=207.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~---- 170 (562)
..+|.+.+.||.|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.+ +||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhh
Confidence 45799999999999999999999999999999998654321 22345677899999999 5999999999887654
Q ss_pred ------eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 171 ------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 171 ------~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
.+++|+||+++ +|...+... ...+++..+..++.||+.||.|||+.||+|+||||+||+++ +++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN---NKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCcEEeC
Confidence 89999999976 777666433 45689999999999999999999999999999999999998 57899999
Q ss_pred eccCccccCCCC--CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 245 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 245 DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
|||++....... ......++..|+|||.+.+ ..+.++|||||||++|+|++|++||......+.+..+........
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999997654332 1223356788999998754 347899999999999999999999987665555444433211100
Q ss_pred C--------------------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 R--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 ~--------------------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
. ..+..+|..+.++|.+||..||.+||++.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0 1123578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=319.71 Aligned_cols=261 Identities=33% Similarity=0.534 Sum_probs=218.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
+....|.+.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+.+++.+ +||||+++++.+......
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEE
Confidence 345678999999999999999999988899999999875432 456788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|+||+++++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQL 166 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhh
Confidence 99999999999999885443 3799999999999999999999999999999999999998 4788999999988654
Q ss_pred CCCC-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.... ......+++.|+|||.+.+. ++.++||||||+++|+|++|..||...........+...... .....+.++..
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKWSPE 245 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhCCHH
Confidence 3322 22334678899999987654 588999999999999999999999877665555444433221 11122347889
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+.++|.+||+.+|.+||++.+++.||||+..+.
T Consensus 246 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 246 FKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred HHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 999999999999999999999999999998654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=331.66 Aligned_cols=260 Identities=30% Similarity=0.506 Sum_probs=212.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe--
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-- 171 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~-- 171 (562)
+.++|.+.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ .||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccccc
Confidence 45689999999999999999999999999999998865422 223446678899999999 59999999988766554
Q ss_pred ----EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 172 ----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 172 ----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.++|+||+ +++|.+.+.. ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg 163 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFG 163 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccc
Confidence 89999998 6688887742 5689999999999999999999999999999999999998 47889999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------ 319 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------ 319 (562)
++...... .....+|+.|+|||.+.+ ..+.++|||||||++|+|++|+.||.+......+..+.......
T Consensus 164 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 164 LARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred cccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 99765432 344578899999998754 45789999999999999999999998776655555443321110
Q ss_pred -----------------CC----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 320 -----------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 320 -----------------~~----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
.. ..++.+++.+.+||.+||..+|.+|||+.++++||||+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 00 0113468899999999999999999999999999999976544
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=310.46 Aligned_cols=251 Identities=33% Similarity=0.568 Sum_probs=211.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+.+.||.|++|.||++.+..+++.|++|++..... .....+.+|+.+++.+. ||||+++++.+......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 37888999999999999999988999999999876532 35678899999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+.... ..+++..+..++.|++.||.+||..|++|+||+|+||+++ +++.++|+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 77 EFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred ecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeeccccccccccc
Confidence 9999999988775432 5789999999999999999999999999999999999998 47889999999998765544
Q ss_pred CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC-CCCCHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDF 334 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 334 (562)
......++..|+|||.+.+. .+.++||||||+++|+|++|+.||...+............. ..... ..++..+.++
T Consensus 153 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 230 (253)
T cd05122 153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--PGLRNPEKWSDEFKDF 230 (253)
T ss_pred cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--CCcCcccccCHHHHHH
Confidence 33456789999999988654 57889999999999999999999977655444444333211 11111 2247899999
Q ss_pred HHHcCccCccCCCCHHHHhcCcc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
|.+||..||++|||+.++++|||
T Consensus 231 i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 231 LKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHccCChhhCCCHHHHhcCCC
Confidence 99999999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=322.78 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=214.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
....|.+.+.||.|+||.||+|.+..++..||+|.+.............+.+|+.+++.+ +|||++++++++......+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeE
Confidence 445688899999999999999999999999999998654333344556788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+. |+|.+.+... ...+++..+..++.|++.||.|||+.+++||||+|+||+++ .++.++|+|||++....
T Consensus 92 lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 92 LVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccceeec
Confidence 9999996 5777766433 35689999999999999999999999999999999999998 46889999999987654
Q ss_pred CCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.. ....+++.|+|||.+. +..+.++|||||||++|+|++|..||...........+...... ......++.
T Consensus 167 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 241 (308)
T cd06634 167 PA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--ALQSGHWSE 241 (308)
T ss_pred Cc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--CcCcccccH
Confidence 32 3456889999999874 34578999999999999999999999776655555544443321 111235788
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+||.+||..+|.+||++.+++.|||+....
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 899999999999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=325.10 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=202.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCE----EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||+|+||.||+|.+..+|.. ||+|++.... .....+.+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 4699999999999999999988766654 8999886432 234567788999999999 599999999998765 4
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~ 158 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 158 (316)
T ss_pred ceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEcccccccc
Confidence 77999999999999988643 34688999999999999999999999999999999999998 478899999999987
Q ss_pred cCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
....... ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.. .+.......+. .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~ 235 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQ--PPI 235 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCCCC--CCC
Confidence 6543322 12234678999998765 46889999999999999997 99999776655443 33333322222 245
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
++..+.+++.+||..+|.+||++.+++.+
T Consensus 236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 236 CTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 77899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=318.67 Aligned_cols=251 Identities=19% Similarity=0.301 Sum_probs=205.7
Q ss_pred cceeecceeeccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCc
Confidence 35889999999999999999853 456789999886432 233456788999999999 49999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 172 VYIAMELCEGGELLDRILAKK---------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
.|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--- 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---
Confidence 999999999999998875332 13478899999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHH
Q 008547 237 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~ 311 (562)
.++.+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.....+...
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 46789999999997654322 1233456778999998764 46889999999999999998 9999988776666555
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+..... . +.+..+++.+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~-~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQL-L--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 544332 1 2234678999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=313.98 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=204.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+.. +..||+|.+..... ....+.+|+.+++.+ +||||+++++++.....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 368999999999999999997653 44699998865432 346688999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+.+|+|.+++.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.+||+|||++......
T Consensus 78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCC
Confidence 99999999999875433 3689999999999999999999999999999999999998 4788999999998765433
Q ss_pred CCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+......+.. ...+..+
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 230 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKV 230 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHH
Confidence 221 12235567999999864 46889999999999999998 99999877777777776655433222 3467899
Q ss_pred HHHHHHcCccCccCCCCHHHHhcC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+++.+||..+|.+||++.+++.+
T Consensus 231 ~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 231 YAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=318.69 Aligned_cols=249 Identities=23% Similarity=0.370 Sum_probs=206.0
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..|.+.+.||.|+||+||++.+ ..++..+|+|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 3689999999999999999975 2345679999886432 33556789999999999 4999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK-----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
.+++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|||++ .++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cCC
Confidence 9999999999999998885332 13489999999999999999999999999999999999998 578
Q ss_pred CeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHh
Q 008547 240 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~ 314 (562)
.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999976543221 122345778999998865 45889999999999999998 9999988877777777766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.... ....+++++.+|+.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 238 GRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 54221 11357889999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=316.75 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=210.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.+.||.|+||.||+|.+.. +..+|+|++.... ......+.+|+.+++.+ +||||+++++++......++|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence 468999999999999999999877 8899999986543 22456788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcCCc
Confidence 9999999999998765666789999999999999999999999999999999999998 5788999999999765432
Q ss_pred CC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 256 KK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.. .....++..|+|||.+.. .++.++||||||+++|+|++ |+.||......+.+..+.... ..+....+++.+.
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY---RMPCPAKCPQEIY 234 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC---cCCCCCCCCHHHH
Confidence 21 123345678999998764 45889999999999999998 899998877777777666432 2222356789999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..||.+|||+.++++
T Consensus 235 ~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 235 KIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=328.76 Aligned_cols=263 Identities=31% Similarity=0.472 Sum_probs=210.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CC
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~ 170 (562)
.+.++|.+.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++++.+||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 355689999999999999999999998999999998864322 223445677899999999559999999998864 34
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+||||+. ++|..++.. ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++.
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~~~ 155 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGLAR 155 (337)
T ss_pred eEEEEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccchh
Confidence 6899999997 588887733 2688899999999999999999999999999999999998 57899999999987
Q ss_pred ccCCCC------CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC----
Q 008547 251 FIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD---- 318 (562)
Q Consensus 251 ~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---- 318 (562)
...... ......||+.|+|||.+.+ ..+.++||||||+++|+|++|+.||.+.........+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 654322 2234578999999998754 3578999999999999999999999776554433332221110
Q ss_pred -----------------------CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 319 -----------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 319 -----------------------~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
......+.++.++.++|.+||+.||.+|||+.++++||||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 001122457889999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=304.81 Aligned_cols=260 Identities=28% Similarity=0.473 Sum_probs=214.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------- 168 (562)
..|.-..+||+|.||+||+|+.+.+|+.||+|++.-+... ........+|+.+|..|. |+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCccc
Confidence 4577788999999999999999999999999876432111 123345679999999995 9999999888753
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...+|+|+.+|+. +|...+. +...+++..++..++.+++.||.|+|++.|+|||+||.|+||+ .++.+||+|||
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt---~dgilklADFG 169 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT---KDGILKLADFG 169 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc---CCceEEeeccc
Confidence 3459999999976 7777653 3446799999999999999999999999999999999999999 58999999999
Q ss_pred CccccCCC-----CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+++.+... ..++..+.|.+|++||.+.| .++++.|||..|||+.||.++.+.+.+.++...+..|..-...+.
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99754322 23456678999999998866 569999999999999999999999999988887777665555555
Q ss_pred CCCCCCC-------------------------------CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 RKPWPSI-------------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ~~~~~~~-------------------------------~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...||++ ++++.+|+..||..||.+|+.++++|+|.||....
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 5556542 23678999999999999999999999999998754
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=317.97 Aligned_cols=247 Identities=28% Similarity=0.429 Sum_probs=201.0
Q ss_pred eecceeeccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 99 TIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+.+.||.|+||.||+|.+. ..+..|+||.+... ......+.+.+|+++++++ +||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccc-cccccccccccccccccccc
Confidence 46788999999999999887 44678999998542 2334578899999999999 69999999999998888999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+||+++|+|.+++.......+++..+..++.||+.||.|||+++++|++|+|+||+++ .++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 99999999999999776567899999999999999999999999999999999999999 478999999999987632
Q ss_pred CCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 255 GKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 255 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
... .....+...|+|||.+... ++.++||||||+++|||++ |+.||.+....+....+....... ....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---IPDNCPK 232 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---SBTTSBH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce---eccchhH
Confidence 221 1233566789999998654 5889999999999999999 789998888877777775543321 2245789
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++|..||..||++||++.++++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999999999999999999999874
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=328.84 Aligned_cols=258 Identities=33% Similarity=0.522 Sum_probs=208.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC-----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~----- 169 (562)
..+|.+.+.||.|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence 3579999999999999999999999999999999865422 222345678999999999 599999999988754
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..+|+|+||+.. +|...+ ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||+
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~ 163 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGL 163 (342)
T ss_pred CceEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCC
Confidence 356999999964 665543 24689999999999999999999999999999999999998 478999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC----------
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---------- 316 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~---------- 316 (562)
+..... ......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+....
T Consensus 164 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 876432 2234578899999998765 35889999999999999999999998776554444433211
Q ss_pred -------------CCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCC
Q 008547 317 -------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364 (562)
Q Consensus 317 -------------~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~ 364 (562)
+..... .++..++.+.+||.+||+.||.+||++.+++.||||+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 111111 124577889999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=331.76 Aligned_cols=317 Identities=22% Similarity=0.315 Sum_probs=250.8
Q ss_pred CCCCcccccchHHHHhhhcccccCCccccchhhhHHHHHHhhhhhhhhhhccccccccCcccCCCcccccccccccccee
Q 008547 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYT 99 (562)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 99 (562)
..+=|+++.....++-+.....++.+.....|||...+..+.....-...+.+...--++.|.- ..|.... .+..
T Consensus 196 GRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvygvSPn~--DkWEmeR---tdIt 270 (1157)
T KOG4278|consen 196 GRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYGVSPNA--DKWEMER---TDIT 270 (1157)
T ss_pred ceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceeeecCCc--chhhccc---hhee
Confidence 3445677766666676766667777777777777665555544443333333332222333322 2222211 1345
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
...+||.|.||.||.|.|+.-.-.||||.++...+ ..++|+.|..+|+.+. |||+|+|+|+|..+..+|||+|||
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEecc
Confidence 56789999999999999999888999999876654 6789999999999995 999999999999999999999999
Q ss_pred CCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcc
Q 008547 180 EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259 (562)
Q Consensus 180 ~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~ 259 (562)
..|+|+++|..-....++.-..++++.||.+|++||..+++|||||-..|+|++ ++..||++|||+++++.... ++
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDT-YT 421 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDT-YT 421 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCc-ee
Confidence 999999999876666788888899999999999999999999999999999998 78899999999999875433 22
Q ss_pred cccC---CCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 260 DIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 260 ~~~g---t~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.-.| ..-|.|||.+. ..++.++|||+|||+|||+.| |-.||.+.+...++..+.++. +......+|+.+.+|
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy---RM~~PeGCPpkVYeL 498 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY---RMDGPEGCPPKVYEL 498 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc---cccCCCCCCHHHHHH
Confidence 2223 45699999764 567999999999999999998 999999998888887776553 334446799999999
Q ss_pred HHHcCccCccCCCCHHHHh
Q 008547 335 VKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l 353 (562)
|+.||+|.|.+||+..++-
T Consensus 499 MraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 499 MRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred HHHHhcCCcccCccHHHHH
Confidence 9999999999999999983
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=314.04 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=207.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|.+.+.||+|+||.||+|.+..+ ...||||.+.... .......+.+|+.+++.+ +||||+++++.+...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 4689999999999999999987654 4579999886543 234556788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ .++.++|+|||++...
T Consensus 81 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 81 MIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhcc
Confidence 9999999999999887543 34789999999999999999999999999999999999998 5788999999999876
Q ss_pred CCCC-Cc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 253 KPGK-KF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 253 ~~~~-~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.... .. ....+++.|+|||.+.+ .++.++||||||+++|+|++ |..||...........+...... +.....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---PPPMDC 233 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 4211 11 12234678999998864 45889999999999999998 99999887777666666543221 222457
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
++.+.+++.+||..+|++||++.+++++
T Consensus 234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 234 PSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 8999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=312.64 Aligned_cols=245 Identities=33% Similarity=0.605 Sum_probs=211.2
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||.|+||.||++.+..+++.||+|.+.............+..|+.+++.+. ||||+++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999998889999999987765544446678899999999995 9999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-CCccccc
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIV 262 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~-~~~~~~~ 262 (562)
|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++ .++.++|+|||++...... .......
T Consensus 80 L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 80 LFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCCcccCCc
Confidence 99988433 4689999999999999999999999999999999999998 4778999999998775443 2334567
Q ss_pred CCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCcc
Q 008547 263 GSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341 (562)
Q Consensus 263 gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 341 (562)
++..|+|||.+.+. .+.++|+||||+++|+|++|..||...........+......++ ..++..+.++|.+||..
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~ 230 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQK 230 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcC
Confidence 88999999987654 57889999999999999999999987776666666655332222 34588999999999999
Q ss_pred CccCCCCH---HHHhcCccc
Q 008547 342 DPRARLTA---AQALSHPWV 358 (562)
Q Consensus 342 dP~~Rps~---~~~l~hp~f 358 (562)
||++||++ .++++||||
T Consensus 231 ~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 231 DPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CHhhCCCcccHHHHHhCCCC
Confidence 99999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=319.83 Aligned_cols=252 Identities=24% Similarity=0.358 Sum_probs=207.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++.+.+||||+++++++..++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 4799999999999999999987643 3689999886542 23345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 171 YVYIAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
.+++||||+++|+|..++... ....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~--- 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT--- 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc---
Confidence 999999999999999988542 235689999999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHH
Q 008547 237 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~ 311 (562)
.++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 246 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 578999999999987644322 112234577999998754 46889999999999999997 9999988777766666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+..... . ......+..+.+|+.+||..||++|||+.+++++
T Consensus 247 ~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 247 LKEGYR-M--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 554431 1 1223578899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=314.20 Aligned_cols=246 Identities=26% Similarity=0.361 Sum_probs=203.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||.|+||.||+|.+..++ .||+|++..... ..+.+.+|+.+++.+ +||||+++++.+. ....++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCcEEE
Confidence 57999999999999999999876654 699999875432 345688999999999 5999999999875 4568999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.......+++..+..++.|++.||.|||+.+|+||||||+||+++ +++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeecccc
Confidence 9999999999988655455689999999999999999999999999999999999998 4788999999999765433
Q ss_pred CCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... ....++..|+|||++.+ ..+.++|||||||++|+|++ |..||.+....+....+...... ...+.++..+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 232 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECPESL 232 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC---CCccccCHHH
Confidence 221 22345678999998754 56889999999999999999 88899877776666665543221 1124578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..+|++||++.+++.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=319.61 Aligned_cols=255 Identities=33% Similarity=0.580 Sum_probs=212.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.-...||.|+||.||++.+..+|+.||||++.... ......+.+|+.+++.+ +||||+++++.+..++..++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEe
Confidence 444568999999999999999999999999875432 23556788999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|+++++|.+.+. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 98 ~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~ 171 (292)
T cd06657 98 FLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVP 171 (292)
T ss_pred cCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccc
Confidence 999999988663 24689999999999999999999999999999999999998 46889999999987654322
Q ss_pred CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 008547 257 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 335 (562)
......|++.|+|||.+.+ ..+.++|+||+|+++|+|++|..||.+.........+....+.. ......+++.+.+++
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li 250 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK-LKNLHKVSPSLKGFL 250 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-cCCcccCCHHHHHHH
Confidence 2234578999999998754 45889999999999999999999998776655555444332221 112345789999999
Q ss_pred HHcCccCccCCCCHHHHhcCccccccCC
Q 008547 336 KKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 336 ~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||..+|.+||++.+++.||||.....
T Consensus 251 ~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 251 DRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 9999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=309.93 Aligned_cols=252 Identities=34% Similarity=0.585 Sum_probs=214.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|.+.+.||.|++|.||++.+..+++.||+|.+...... ......+.+|+++++++ .|||++++++++.+.+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 488999999999999999999999999999998765432 24567899999999999 4999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 79 EYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred ecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCc
Confidence 999999999887433 6789999999999999999999999999999999999998 47899999999998765433
Q ss_pred C-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 257 K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 257 ~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
. .....++..|+|||.+.+. .+.++||||||+++|+|++|..||................ .....+.++..+.++
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 230 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD---HPPLPEGISPELKDF 230 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC---CCCCCCCCCHHHHHH
Confidence 2 2345788999999987553 5788999999999999999999998766544444443222 112234678999999
Q ss_pred HHHcCccCccCCCCHHHHhcCccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.+||..+|++||++.+++.||||
T Consensus 231 i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 231 LMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHhCChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=351.93 Aligned_cols=149 Identities=31% Similarity=0.495 Sum_probs=135.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+++.||||++.............+.+|+.++..+ +||||+++++++.....+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEE
Confidence 4799999999999999999999999999999999766555555667889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
|||+.|++|.+++.. ...+++..++.++.||+.||.|||.+|||||||||+||||+ .++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCc
Confidence 999999999998743 35689999999999999999999999999999999999998 47899999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=327.75 Aligned_cols=259 Identities=31% Similarity=0.486 Sum_probs=207.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence 45689999999999999999999999999999999865422 223456678999999999 599999999988643
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...|++++++ +++|.+.+. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg 165 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFG 165 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEeccc
Confidence 3478888887 778877663 24689999999999999999999999999999999999998 47889999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC--------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-------- 317 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-------- 317 (562)
++..... ......+|+.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+.....
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T cd07877 166 LARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 243 (345)
T ss_pred ccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 9876432 2334578999999998755 357899999999999999999999977665444333322110
Q ss_pred ---------------CCCC----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 318 ---------------DFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 318 ---------------~~~~----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..+. ..+...++++.+||.+||..||.+||++.+++.||||+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 0000 011235788999999999999999999999999999997554
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=312.80 Aligned_cols=247 Identities=24% Similarity=0.323 Sum_probs=205.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||.|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeee
Confidence 56999999999999999999864 456899999865432 3466889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEccCC
Confidence 9999999999988655445789999999999999999999999999999999999998 4788999999999876432
Q ss_pred CCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... .....+..|+|||.+.+ .++.++||||||+++|+|++ |+.||.+.........+..... .+..+.++..+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 233 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR---MPCPPGCPKEL 233 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHHH
Confidence 211 11223457999998765 45889999999999999999 9999988777766666654322 12224578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..+|.+||++.+++.
T Consensus 234 ~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 234 YDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHhhcCcccCCCHHHHHH
Confidence 99999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=311.54 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=198.9
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+.||+|+||.||+|.+..+|+.||+|.+.... .......+.+|+.+++.+ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36899999999999999999999999876432 234557789999999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcc--
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ-- 259 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~-- 259 (562)
++|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++..........
T Consensus 78 ~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 78 GDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred CcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccccC
Confidence 999988743 234689999999999999999999999999999999999998 47789999999987544321111
Q ss_pred -cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 260 -DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 260 -~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
....+..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+..... ......++..+.+|+.
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~ 230 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---LPCPELCPDAVYRLME 230 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---CCCcccCCHHHHHHHH
Confidence 1122456999998765 45889999999999999997 8999977666555555544322 1222457899999999
Q ss_pred HcCccCccCCCCHHHHhc
Q 008547 337 KLLVKDPRARLTAAQALS 354 (562)
Q Consensus 337 ~~l~~dP~~Rps~~~~l~ 354 (562)
+||..+|++|||+.++++
T Consensus 231 ~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 231 RCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=319.59 Aligned_cols=254 Identities=33% Similarity=0.518 Sum_probs=209.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.+.+.||.|++|.||+|.+..+|+.+|+|.+..... .+.....+.+|+.+++.+. ||||+++++++..++.+++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999988999999999865432 2234567889999999995 9999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|+++ +|.+.+... ...+++..+..++.||+.||.|||+.+|+|+||||+||+++ .++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 79 FMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred ccCC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCcc
Confidence 9975 888777543 36789999999999999999999999999999999999998 47889999999987765443
Q ss_pred CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC--------------
Q 008547 257 KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-------------- 320 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 320 (562)
......++..|+|||.+.+. .+.++||||||+++|+|++|+.||...+..+.+..+........
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 33345688899999987653 58899999999999999999999987776555444332111100
Q ss_pred ------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 321 ------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 321 ------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
...++.++.++.+||.+||.+||.+||++.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 01123467889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=364.59 Aligned_cols=259 Identities=32% Similarity=0.555 Sum_probs=218.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..-+++-+..||.|.||.||.|.+..+|...|+|.+.-.... ......+.+|..++..+ +|||+|++||+-.....++
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHHH
Confidence 334677788999999999999999999999999988654332 44566788999999999 6999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|.||||++|+|.+.+ ..++..++.....+..|++.|+.|||++|||||||||+||+|+ .+|.+|++|||.|..+.
T Consensus 1311 IFMEyC~~GsLa~ll--~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLL--EHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHhccCcHHHHH--HhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCCcEEeecccceeEec
Confidence 999999999999987 4455677888888999999999999999999999999999999 57899999999998876
Q ss_pred CCC-----CcccccCCCcccCchhcccC----CCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCC-CCCCC
Q 008547 254 PGK-----KFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKP-DFRRK 322 (562)
Q Consensus 254 ~~~-----~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~-~~~~~ 322 (562)
++. ....++||+.|||||++.+. ..-+.||||||||+.||+||+.||...+ +..+...+..+.. .++
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P-- 1463 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP-- 1463 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc--
Confidence 553 23567999999999998653 3678999999999999999999996653 4455555544432 222
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..++.+.++||.+||..||++|+++.|+|.|.|-+...+
T Consensus 1464 --~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1464 --ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred --hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 348999999999999999999999999999999776543
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=314.21 Aligned_cols=249 Identities=20% Similarity=0.305 Sum_probs=202.8
Q ss_pred eeecceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe---
Q 008547 98 YTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--- 171 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~--- 171 (562)
|.+++.||+|+||.||+|.... ++..||+|.+..... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 5688999999999999998755 347899999865432 233456789999999999 59999999998865554
Q ss_pred ---EEEEEeccCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 172 ---VYIAMELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 172 ---~~lv~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
.++|+||+++|+|...+.... ...+++..+..++.||+.||.|||+++|+||||||+||+++ +++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEEC
Confidence 799999999999988874432 24689999999999999999999999999999999999998 47889999
Q ss_pred eccCccccCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 245 DFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 245 DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|||+++........ ....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+....+....+..+...
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 234 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL- 234 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 99999865433221 12235678999998764 45889999999999999999 99999887777776666554321
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. ....++..+.+++.+||..||.+||++.+++.
T Consensus 235 ~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 235 K--QPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred C--CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 12457899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=322.50 Aligned_cols=260 Identities=33% Similarity=0.519 Sum_probs=208.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCe
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~ 171 (562)
.++++|.+.+.||.|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.+ +||||+++++++.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCc
Confidence 456789999999999999999999999999999998865422 223456788999999999 49999999998865 567
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+|+||+ +++|...+. ...+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.++|+|||++..
T Consensus 85 ~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCccccccc
Confidence 89999998 568877663 24678899999999999999999999999999999999998 478899999999875
Q ss_pred cCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh---------------
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------- 314 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--------------- 314 (562)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+..
T Consensus 158 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 158 QDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 432 2234567889999998754 458899999999999999999999976654222211110
Q ss_pred --------CCCC----CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 315 --------NKPD----FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 315 --------~~~~----~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.... ......+.+++++.++|.+||+.+|++||++.+++.||||.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~ 296 (328)
T cd07856 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD 296 (328)
T ss_pred hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence 0000 000112457889999999999999999999999999999986554
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=311.59 Aligned_cols=245 Identities=26% Similarity=0.387 Sum_probs=207.7
Q ss_pred ceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 102 KLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+.||+|+||.||+|.+... +..||+|.+...... .....+.+|+.+++.+. ||||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4699999999999998766 889999998765432 24678899999999995 99999999999999999999999
Q ss_pred cCCCChHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 179 CEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 179 ~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||+|+||+++ .++.+||+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccc
Confidence 99999999885431 36789999999999999999999999999999999999998 468999999999987
Q ss_pred cCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..... ......+++.|+|||.+.. .++.++||||||+++|+|++ |..||...........+..... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR---LPKPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCcc
Confidence 65432 2334567889999998865 56889999999999999999 6999988877777777665322 122245
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+++++.+++.+||..+|.+|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 78999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=314.88 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=205.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||.|+||.||+|.+... +..||+|.+.... .......+.+|+.+++.+ +||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCC
Confidence 4799999999999999999987644 3789999986443 223456788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+|+||||||+||+++ .++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCEE
Confidence 9999999999999999885432 23468889999999999999999999999999999999998 578999
Q ss_pred EeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC
Q 008547 243 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 243 l~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
|+|||+++.+..... .....+|..|+|||.+.+ ..+.++|||||||++|+|++ |..||.+.+..+....+.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH 239 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCC
Confidence 999999876543321 223456788999998754 56889999999999999998 9999988777766666653321
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.. ....++..+.+++.+||..+|++|||+.+++.
T Consensus 240 -~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 240 -LD--LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred -CC--CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 11 12346899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=319.33 Aligned_cols=256 Identities=29% Similarity=0.521 Sum_probs=207.8
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.|.+.+.||.|+||.||++.+. .++..||||++.+.... .......+.+|+.++.++.+||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3788999999999999999754 46788999998654321 1234466789999999997799999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|...+.. ...+++..++.++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECcccccc
Confidence 999999999999988753 35689999999999999999999999999999999999998 4688999999998765
Q ss_pred CCCCC--cccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCCh----hhHHHHHHhCCCCCCCCC
Q 008547 253 KPGKK--FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 253 ~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~ 323 (562)
..... .....|++.|+|||.+.+. .+.++||||||+++|+|++|..||..... .+....+...... .
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~ 231 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP----F 231 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC----C
Confidence 43322 2235689999999987653 47889999999999999999999964332 2233333333221 2
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCC---HHHHhcCcccccc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 361 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps---~~~~l~hp~f~~~ 361 (562)
...++..+.++|.+||+.||++||| +.++|+||||+..
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 232 PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 2357889999999999999999998 5677999999874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=349.89 Aligned_cols=251 Identities=25% Similarity=0.392 Sum_probs=214.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-CC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN-GD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~-~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.....+.+.||+|+||.||.|....- |. .||||.+.+.. +.+...+|.+|..+|+.+ +|||||+++|++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCC
Confidence 34577889999999999999976443 22 38999886543 456788999999999999 699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 170 NYVYIAMELCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
...+|++|||+||+|..+|...+ ...++..+.+.++.+|+.|+.||+++++|||||..+|+||+ ....|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEc
Confidence 99999999999999999996542 35689999999999999999999999999999999999999 56899999
Q ss_pred eccCccccCCCCCcc---cccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 245 DFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 245 DfG~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|||+|+.+.....+. ...-...|||||.+. +.++.++|||||||+|||++| |..||.+.+..+++..+..+.
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg--- 921 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG--- 921 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC---
Confidence 999999654332221 112235799999987 667999999999999999999 999999999999999888877
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+-.+.+.+|..+.++|..||+.+|++||+...|++
T Consensus 922 RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 23333678999999999999999999999999987
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=323.13 Aligned_cols=257 Identities=28% Similarity=0.390 Sum_probs=204.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC-----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~----- 169 (562)
.++|.+.+.||.|+||.||+|.+..+++.||+|++....... .....+.+|+.+++.+ +||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhc-CCCCccchhhheeccccccc
Confidence 357999999999999999999999999999999886543211 1234567899999999 599999999877543
Q ss_pred ---CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 170 ---NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
..+++|+||+.+ +|...+.. ....+++..+..++.||+.||.|||++||+|+||||+||+++ .++.++|+||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~---~~~~~~l~df 159 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID---NQGILKIADF 159 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECcC
Confidence 357999999965 67766643 345799999999999999999999999999999999999998 5789999999
Q ss_pred cCccccCCCCC------------cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHH
Q 008547 247 GLSDFIKPGKK------------FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 247 G~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 312 (562)
|++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++|++||.+.+.......+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99875432211 123467889999998754 3578999999999999999999999887776655554
Q ss_pred HhCCCCCCCC--------------------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 313 LRNKPDFRRK--------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 313 ~~~~~~~~~~--------------------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.......... .+..+++.+.++|.+||..||.+|||+.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 4321111000 012345678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=320.29 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=204.8
Q ss_pred cceeecceeeccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
++|.+++.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 579999999999999999997643 23579999887542 223456788999999999669999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
.+..|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++|++||||||+||+++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~- 174 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT- 174 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc-
Confidence 999999999999999999986532 13488899999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 175 --~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 175 --EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred --CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 478899999999876543221 112234568999998765 45889999999999999998 88999777666655
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+..... ......++.++.+|+.+||..+|.+||++.++++
T Consensus 253 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 253 KLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 55544321 1223467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-39 Score=317.57 Aligned_cols=249 Identities=18% Similarity=0.256 Sum_probs=206.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+|++.+.||.|+||.||+|.+..+ +..||+|++.... .....+.+.+|+.++..+ +||||+++++++.....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCc
Confidence 588899999999999999987543 5789999987543 223456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 172 VYIAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
.++++||+.+++|.+++... ....+++..+..++.|++.||.|||++||+||||||+|||++ +
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---D 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---C
Confidence 99999999999999887422 123578889999999999999999999999999999999998 4
Q ss_pred CCCeEEeeccCccccCCCCC---cccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHH
Q 008547 238 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~ 312 (562)
++.+||+|||+++....... .....+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+....+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 67899999999876533221 12345678999999875 456889999999999999998 88999888777777776
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....... ....++..+.+|+.+||+.+|.+||++.+++.
T Consensus 240 ~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 240 RNRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HcCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 6654322 12468899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=335.52 Aligned_cols=266 Identities=29% Similarity=0.501 Sum_probs=227.0
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
+....+.+..|+|.+.||.|.+|.||+++++.+|+.+|+|+...... ..+++..|.++|+.+++|||++.+|++|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 33334455679999999999999999999999999999998865542 45678889999999999999999999886
Q ss_pred -----cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 168 -----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 168 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
.++.+|||||||.||+..+.+..-.+..+.|+.+.+|++.++.||.+||.+.+||||||-.|||++ .++.||
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VK 163 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVK 163 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEE
Confidence 467899999999999999999777788999999999999999999999999999999999999999 589999
Q ss_pred EeeccCccccCCC-CCcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC
Q 008547 243 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 315 (562)
Q Consensus 243 l~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 315 (562)
|+|||.+..+... ....+.+|||.|||||++.. .++..+|+||||++..||.-|.+|+.+.-....+..+.++
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN 243 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 243 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC
Confidence 9999999876543 23456799999999999853 2456799999999999999999999888776665555544
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+. ....|...+.++.+||..||..|-++||+..++|+|||+++.
T Consensus 244 PPP-kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 244 PPP-KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred CCc-cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 322 222245678899999999999999999999999999999943
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=313.58 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=201.2
Q ss_pred eeecceeeccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc------C
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------D 169 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------~ 169 (562)
|.+++.||+|+||.||+|.+..++. .||+|.+.... ......+.+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 3567899999999999999877775 58999876542 2334567889999999999 59999999997743 2
Q ss_pred CeEEEEEeccCCCChHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 170 NYVYIAMELCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
...++||||+++|+|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCEEECC
Confidence 3578999999999998877432 224588999999999999999999999999999999999998 578899999
Q ss_pred ccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 246 FGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 246 fG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+.........+..+...
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-- 233 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL-- 233 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC--
Confidence 999987643322 122345678999998865 45889999999999999999 89999877766666666554321
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+.++..+.++|.+||..||++|||+.++++
T Consensus 234 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 234 -KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 122467889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=317.99 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=205.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC----------------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG----------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~----------------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i 159 (562)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+..... ....+.+.+|+.+++.+. ||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLS-DPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcC-CCCE
Confidence 47999999999999999999876544 4589998865432 245678899999999995 9999
Q ss_pred ceEEEEEEcCCeEEEEEeccCCCChHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 008547 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 230 (562)
Q Consensus 160 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NI 230 (562)
+++++++..++..++|+||+++++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999885432 12689999999999999999999999999999999999
Q ss_pred EeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh--CCCCCCCCC
Q 008547 231 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--GRRPFWDKT 304 (562)
Q Consensus 231 ll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~--g~~pf~~~~ 304 (562)
+++ .++.++|+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||....
T Consensus 162 li~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 162 LVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred eec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 998 468999999999876543321 223456788999998765 56899999999999999998 788887776
Q ss_pred hhhHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 305 EDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 305 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....+..+... .........+.++.++.+++.+||..||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 239 DQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 66665555432 111111122356789999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=311.31 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=205.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.+ +||||+++++++. .+..++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence 45799999999999999999985 4578899999875442 346788999999999 5999999999874 456899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+.+.......+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecCC
Confidence 99999999999988666666789999999999999999999999999999999999998 478899999999876542
Q ss_pred CCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....++..|+|||++.. ..+.++||||||+++|+|++ |+.||.+.+..+....+..... .+.....+.+
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR---MPRPDNCPEE 231 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC---CCCCCCCCHH
Confidence 221 123345678999998865 45889999999999999998 9999988777666666544322 1223457889
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++.+||..+|++||++++++.
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 232 LYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=311.52 Aligned_cols=246 Identities=25% Similarity=0.354 Sum_probs=202.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.+++++ +||||+++++++. ....++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEE
Confidence 357999999999999999999865 566799999875433 235688999999999 5999999999875 456899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++ +++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccC
Confidence 99999999999988655556689999999999999999999999999999999999998 478899999999976543
Q ss_pred CCCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.... ....++..|+|||.+.+ ..+.++||||||+++|+|++ |..||.+....+....+..... .+.....+..
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR---MPCPQDCPIS 231 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHH
Confidence 2211 12345567999998754 45889999999999999999 8999988777666666654321 1222457889
Q ss_pred HHHHHHHcCccCccCCCCHHHHh
Q 008547 331 AKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
+.+|+.+||..+|.+|||+.+++
T Consensus 232 ~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 232 LHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHH
Confidence 99999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=311.41 Aligned_cols=245 Identities=23% Similarity=0.360 Sum_probs=202.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||+|.+. ++..+|+|++..... ....+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEE
Confidence 5889999999999999999875 466899998865432 335678899999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||+++......
T Consensus 79 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 79 EYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred ecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceeccccc
Confidence 9999999999885433 4689999999999999999999999999999999999998 47889999999987654322
Q ss_pred Ccc--cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 257 KFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 257 ~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
... ...++..|+|||.+.+ .++.++||||||+++|+|++ |+.||......+....+..... .......+.++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 231 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR---LYRPKLAPTEVY 231 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHH
Confidence 111 1223457999998764 56889999999999999998 8999987777666666654422 122235789999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..+|++|||+.++++
T Consensus 232 ~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 232 TIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=310.24 Aligned_cols=241 Identities=24% Similarity=0.313 Sum_probs=197.5
Q ss_pred eeeccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 103 LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.||+|+||.||+|.+ ..++..||+|++.... ......+.+.+|+.+++.+ +||||+++++++.. ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999964 4567899999886443 2344567889999999999 59999999998764 56789999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc--
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-- 258 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~-- 258 (562)
+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||.||+++ .++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 79 LGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCeee
Confidence 9999988843 35689999999999999999999999999999999999998 4778999999999765433221
Q ss_pred --ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 259 --QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 259 --~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+++.|+|||.+.. ..+.++|||||||++|||++ |..||.+....+....+..+.. . ...+.+++++.++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~l~~l 230 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M--ECPQRCPPEMYDL 230 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C--CCCCCCCHHHHHH
Confidence 12234578999998764 45789999999999999998 9999988777666666654432 1 1224588999999
Q ss_pred HHHcCccCccCCCCHHHHhc
Q 008547 335 VKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~ 354 (562)
|.+||+.||++||++.+|..
T Consensus 231 i~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 231 MKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHHhccCchhCcCHHHHHH
Confidence 99999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=293.50 Aligned_cols=254 Identities=28% Similarity=0.552 Sum_probs=212.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~ 173 (562)
++|++.+++|+|.|++||.|.+..+++.++||+++. .....+.+|+.||+.|++||||+++++...+. ....
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 479999999999999999999989999999998854 35678999999999999999999999998764 4578
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+.+.+..... ..++...++.++.+++.||.|||++||+|||+||.|++|+. +...++|+|+|+|.+..
T Consensus 112 LiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hhceeeeeecchHhhcC
Confidence 999999887755443 56888999999999999999999999999999999999996 56789999999999999
Q ss_pred CCCCcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHh-------------CC-
Q 008547 254 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLR-------------NK- 316 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~-------------~~- 316 (562)
++......+.+..|.-||.+- ..+...-|+|||||+|..|+..+.||... +..+.+.++.+ -.
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 999998889999999999874 35688899999999999999999998643 33333332211 00
Q ss_pred ---C-------CCCCCCCC---------CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 ---P-------DFRRKPWP---------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 ---~-------~~~~~~~~---------~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+ .....+|. -+++++.+|+.++|..|..+|+||.+++.||||....
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 0 11122332 1568999999999999999999999999999998643
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=325.56 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=200.6
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-C
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~ 169 (562)
++|++.+.||+|+||.||+|.+ ..+++.||||++..... ......+.+|+.++.++.+||||+++++++.. +
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 4799999999999999999974 35678999999865432 23456788999999999779999999998764 4
Q ss_pred CeEEEEEeccCCCChHHHHHhhc---------------------------------------------------------
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------------------------------------------------------- 192 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 192 (562)
..+++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999999999998885432
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---cccc
Q 008547 193 --------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDI 261 (562)
Q Consensus 193 --------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~ 261 (562)
...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCCC
Confidence 12367888899999999999999999999999999999998 478999999999876532221 1123
Q ss_pred cCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 262 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 262 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.+++.|+|||++.+ .++.++||||||+++|+|++ |..||.....................+ ..+++++.+++..||
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~cl 319 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLDCW 319 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCCCHHHHHHHHHHc
Confidence 45678999998754 46889999999999999997 999997765443333333332222221 236788999999999
Q ss_pred ccCccCCCCHHHHhcC
Q 008547 340 VKDPRARLTAAQALSH 355 (562)
Q Consensus 340 ~~dP~~Rps~~~~l~h 355 (562)
..||++||++.++++|
T Consensus 320 ~~~p~~Rps~~eil~~ 335 (343)
T cd05103 320 HGEPSQRPTFSELVEH 335 (343)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999865
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=312.60 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=198.4
Q ss_pred ceeeccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
+.||+|+||.||+|.+..+|. .+|+|.+.... .......+.+|+.++.++.+||||+++++++...+.+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999888776 46888775322 23355678899999999977999999999999999999999999
Q ss_pred CCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 180 EGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 180 ~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
++|+|.+++.... ...+++..+..++.|++.||+|||++|++||||||+|||++ .++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEEECC
Confidence 9999999885432 13478999999999999999999999999999999999998 578999999
Q ss_pred ccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCC
Q 008547 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 246 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 323 (562)
||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.+..+....+.... ....
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC---CCCC
Confidence 999864321111112234567999998754 45889999999999999997 999998877766666654432 1112
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...++.++.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2357889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=309.61 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=202.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEE-EcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~-~~~~~~~l 174 (562)
.+|.+.+.||+|+||.||++.. .|..||+|.+.... ....+.+|+.+++.+ +||||+++++++ ..++..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEE
Confidence 3689999999999999999964 47889999885432 346788999999999 599999999975 45677999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ +++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccceeccc
Confidence 99999999999988665555689999999999999999999999999999999999998 578999999999875433
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.. ....++..|+|||++.+ ..+.++|||||||++|+|++ |+.||...........+..... ....+.+++.+.
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVVY 229 (256)
T ss_pred cC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHH
Confidence 22 23345678999998865 45889999999999999997 9999987777666666554322 222346789999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..+|++|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 230 DVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=318.36 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=204.7
Q ss_pred cceeecceeeccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
.+|.+.+.||+|+||.||+|.+.. .+..||+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 579999999999999999997532 34579999876432 233456788999999999669999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
.+.+|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~- 168 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT- 168 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc-
Confidence 999999999999999999885432 23588999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||+++....... .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+....+..
T Consensus 169 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 169 --EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred --CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478899999999976543221 112234567999998765 45889999999999999999 89999887776666
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+..... ......++.++.+++.+||..+|++||++.++++
T Consensus 247 ~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 247 KLLREGHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 66554321 1122467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=314.43 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=205.0
Q ss_pred cceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||+|+||.||+|.. ..++..+|+|.+.... ......+.+|+++++.+ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVL-QHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCC
Confidence 4688899999999999999964 2356789999876432 34567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKKD-------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+.||+||||||+|||++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---Q 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---C
Confidence 99999999999999998854321 3588999999999999999999999999999999999998 5
Q ss_pred CCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHH
Q 008547 238 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~ 312 (562)
++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||......+....+
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 78999999999875533221 122345678999998765 45889999999999999998 99999877776666666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....... ....+++.+.+||.+||+.||.+||++.+++.
T Consensus 238 ~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 5543221 12357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=310.20 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=202.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||.|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.+ +||||+++++++. .+..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEE
Confidence 5799999999999999999987655 4699998765432 346688999999999 5999999999875 4568899
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++ +++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCccceEccCC
Confidence 9999999999988655555689999999999999999999999999999999999998 5788999999999765432
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....++..|+|||.+.+ ..+.++||||||+++|+|++ |..||.+....+....+..... ......++..+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR---MPCPQGCPESL 232 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcccCHHH
Confidence 21 122345678999998764 45889999999999999999 9999988777666666654321 22234678999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..||.+||++.++++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=321.80 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=200.2
Q ss_pred eecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
.+++.+|. +|.||++++..+|+.||+|++..... .......+.+|+.+++.+. ||||+++++++...+..+++|||
T Consensus 5 ~i~~~~~~--~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 5 LIGKCFED--LMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhhHhhcC--CceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEec
Confidence 34444444 45556666677999999999876532 2345678999999999995 99999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC--
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-- 256 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-- 256 (562)
+++|+|.+++.......+++..+..++.||+.||.|||+++|+||||||+||+++ .++.+||+|||.+.......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~ 157 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKR 157 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeecccccc
Confidence 9999999988665556789999999999999999999999999999999999998 47889999999886543211
Q ss_pred ------CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC-------C
Q 008547 257 ------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------R 320 (562)
Q Consensus 257 ------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------~ 320 (562)
......++..|+|||++.. .++.++|||||||++|+|++|..||..............+.... +
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchh
Confidence 1223457788999999864 36789999999999999999999997765443332222211000 0
Q ss_pred C-----------------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 R-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ~-----------------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
. .....++.++.+|+.+||..||++|||+.++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0 00012345788999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=315.39 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=204.9
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||+|+||.||+|.+. .++..+++|.+.... ......+.+|+.+++.+ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNL-QHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCC
Confidence 46899999999999999999753 345678999875433 23446788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
..++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~--- 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG--- 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---
Confidence 9999999999999999885432 23488999999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHH
Q 008547 237 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~ 311 (562)
.++.++|+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||......+....
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 478999999999976543221 123456788999998765 45889999999999999998 9999988777766666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+..+.... .....|..+.+++.+||..+|++||++.++++
T Consensus 238 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 238 ITQGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HhCCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 54443221 12346889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=328.21 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=203.8
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+++.||+|+||.||+|.+. .+++.||+|++..... ....+.+.+|+.+|.++..||||+++++++...+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 46889999999999999999864 3456899999975432 2334578899999999955999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC---------------------------------------------------------
Q 008547 171 YVYIAMELCEGGELLDRILAKKD--------------------------------------------------------- 193 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 193 (562)
.+++||||+++|+|.+++.....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999998854321
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 194 ---------------------------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 194 ---------------------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
..+++..++.++.||+.||.|||+.+|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~- 273 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC- 273 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe-
Confidence 2367778899999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
+.+.+||+|||+++....... .....+++.|+|||.+.+ .++.++|||||||++|||++ |..||......+..
T Consensus 274 --~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 274 --EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred --CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 478899999999976432211 123456788999998765 45889999999999999998 89999776655554
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
........... ..+.++.++.+|+.+||..+|.+||++.++++
T Consensus 352 ~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 352 YNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred HHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 44444332221 22457899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=317.14 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=206.3
Q ss_pred cceeecceeeccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
.+|.+.+.||.|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 47999999999999999999753 234579999886432 233457789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
....|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~- 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT- 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc-
Confidence 999999999999999999886532 23578888999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+....+..
T Consensus 172 --~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 172 --ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred --CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 478999999999986543221 122345678999998755 46889999999999999998 88999888777777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+...... .....++.++.+|+.+||..+|.+||++.++++
T Consensus 250 ~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 250 KLLKEGHRM---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHcCCcC---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 666544322 112457899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=312.76 Aligned_cols=248 Identities=23% Similarity=0.304 Sum_probs=201.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||.|+||.||+|.+..+|. .||+|++.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-C
Confidence 478999999999999999999877776 48999886543 234567788999999999 599999999988754 4
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++++||+++|+|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ +++.+||+|||+++.
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~~~~ 158 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGLARL 158 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCceee
Confidence 78999999999999887543 35689999999999999999999999999999999999997 467899999999986
Q ss_pred cCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
....... ....+++.|+|||.+.+ .++.++|||||||++|||++ |..||...........+.... .. +..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~ 235 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RL--PQPPI 235 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cC--CCCcc
Confidence 6433221 12234678999998754 46889999999999999998 999997766555554443322 11 22346
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++.+++.+||..||++||++.+++.
T Consensus 236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 236 CTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=310.45 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=205.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.+ +||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 478999999999999999998765543 79999886543 233456889999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.|++||||||+|||++ .++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCccccc
Confidence 9999999999999887543 35689999999999999999999999999999999999998 4788999999999865
Q ss_pred CCCCCc----ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... ....++..|+|||.+.+ .++.++|+||||+++|++++ |..||......+....+.... ..+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~ 233 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY---RLPAPMD 233 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC---cCCCCCC
Confidence 432211 11223567999998865 56889999999999999886 999998877766666655442 1222345
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+.+++.+||+.+|.+||++.++++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 234 CPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 7899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=308.94 Aligned_cols=253 Identities=28% Similarity=0.449 Sum_probs=214.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+|++.+.||.|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.+. ||||+++++++......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 488999999999999999999999999999998754432 334567789999999995 999999999999999999999
Q ss_pred eccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 177 ELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 177 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||+++++|..++... ....+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhcc
Confidence 999999999887542 235689999999999999999999999999999999999998 477899999999977654
Q ss_pred CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
. ......+++.|+|||.+.+. .+.++|+||||+++|+|++|+.||...+.......+...... . ....++.++.+
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--P-IPPIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--C-CchhhCHHHHH
Confidence 4 33345688999999987654 477899999999999999999999887776665555443321 1 11357889999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccc
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
++.+||..+|.+||++.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=308.95 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=207.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||.|+||.||+|.+. .+..||||.+..... ....+.+|+.+++.+. ||||+++++++......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceEE
Confidence 357999999999999999999865 457899998875432 3467889999999994 9999999999999899999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++ .++.+||+|||++.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceeccc
Confidence 99999999999988665556789999999999999999999999999999999999998 478999999999876543
Q ss_pred CCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....++..|+|||.+.+ ..+.++||||||+++|+|++ |+.||.+.........+..... .......+.+
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR---MPRPPNCPEE 232 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHH
Confidence 211 112234568999998865 45889999999999999998 9999988777777777655432 1222456889
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++.+||..+|++||++.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHcccCcccCCCHHHHHH
Confidence 999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=312.04 Aligned_cols=254 Identities=27% Similarity=0.466 Sum_probs=207.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
+|.+.+.||.|+||.||++.+..++..+++|++..... ........+..|+.+++.+ +||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 58899999999999999999888877777776643221 1122344567899999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 175 AMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||+++++|.+.+.. .....+++..+..++.|++.||.|||+.|++|+||+|+||+++ ++.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 9999999999887753 2345789999999999999999999999999999999999997 356999999998765
Q ss_pred CCCCC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
..... .....|++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+....... ....++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS---LPETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC---CcchhcHH
Confidence 43322 234568899999998754 35778999999999999999999997776666655554432211 11357789
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
+.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=315.46 Aligned_cols=254 Identities=30% Similarity=0.508 Sum_probs=208.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+. ||||+++++++.+.+..++|+|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 5677889999999999999999999999999876531 2234467788999999995 9999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|++ ++|.+.+.... ..+++..+..++.|++.||.|||++||+||||+|+||+++ +++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 79 YCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred CcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcccccCCCcc
Confidence 997 58988875432 4689999999999999999999999999999999999998 47899999999987654432
Q ss_pred CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC-----------------
Q 008547 257 KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------------- 317 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~----------------- 317 (562)
......++..|+|||.+.+ ..+.++|||||||++|+|++|+.||......+.+..+.....
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 2334456788999998754 458899999999999999999999987766555444332110
Q ss_pred -CCC-------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 318 -DFR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 318 -~~~-------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
.++ ...++.++..+.++|.+||..||++||++.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=311.17 Aligned_cols=248 Identities=21% Similarity=0.301 Sum_probs=198.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||.|+||+||+|.+..+|. .|++|.+.... .......+..|+.+++.+ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-Cc
Confidence 368899999999999999999877776 46777764321 123446778888899999 59999999998764 55
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++++||+++|+|.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++ .++.+||+|||+++.
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFGVADL 158 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCcccee
Confidence 78899999999999988543 35689999999999999999999999999999999999998 578899999999976
Q ss_pred cCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... .....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+.........+..+. ... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~ 235 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGE-RLA--QPQI 235 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cCC--CCCC
Confidence 543321 223456778999998754 56889999999999999998 999998776655444443322 211 1123
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.++.+++.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 236 CTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 5778999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=307.08 Aligned_cols=244 Identities=24% Similarity=0.359 Sum_probs=204.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|++.+.||.|+||.||+|.. .|+.||+|.+..... ....+.+|+.+++.+ +||||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEE
Confidence 4688999999999999999975 488999999875532 457789999999999 499999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++ .++.+||+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccccc
Confidence 9999999999988655545799999999999999999999999999999999999998 5788999999999866322
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.. ....+..|+|||.+.. ..+.++||||||+++|+|++ |..||...........+..... ......+++.+.+
T Consensus 156 ~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 230 (256)
T cd05039 156 QD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR---MEAPEGCPPEVYK 230 (256)
T ss_pred cc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---CCCccCCCHHHHH
Confidence 22 2344667999998754 45789999999999999997 9999987776666555544321 1122457899999
Q ss_pred HHHHcCccCccCCCCHHHHhc
Q 008547 334 FVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+|.+||..+|++||++.+++.
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=309.31 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=205.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
.|++.+.||+|+||.||+|.+..+++ .||||.+.... .......+..|+.+++.+ +||||+++++++..+...+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE
Confidence 58999999999999999999877665 59999886542 344567899999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|.+++... .+.+++..+..++.|++.||.|||++|++|+||||+||+++ .++.+||+|||++....
T Consensus 82 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 82 IITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCccccccc
Confidence 999999999998877543 35689999999999999999999999999999999999998 47889999999987654
Q ss_pred CCCCcc---ccc---CCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 254 PGKKFQ---DIV---GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 254 ~~~~~~---~~~---gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
...... ... .+..|+|||.+.+ .++.++|||||||++|||++ |..||+..........+... ...+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~---~~~~~~~ 234 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD---YRLPPPM 234 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC---CcCCCcc
Confidence 322211 111 2357999998864 45889999999999999886 99999888777666666433 2222335
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.++..+.+++.+||..+|.+||++.+++.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 67899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=312.93 Aligned_cols=249 Identities=25% Similarity=0.331 Sum_probs=201.4
Q ss_pred ceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence 37888999999999999998653 23568888876443 223456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 008547 172 VYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 229 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N 229 (562)
.++|+||+.+++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 999999999999998874321 1357889999999999999999999999999999999
Q ss_pred eEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCC
Q 008547 230 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT 304 (562)
Q Consensus 230 Ill~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~ 304 (562)
||++ +++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+..
T Consensus 158 ill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9998 478899999999876533221 122345678999998754 45889999999999999998 999998777
Q ss_pred hhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+...+.... .......++.++.+++.+||..+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTGY---RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCCC---CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 666555444322 11222457899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=314.30 Aligned_cols=253 Identities=20% Similarity=0.264 Sum_probs=201.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC--------------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcce
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG--------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~--------------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+++++++ +||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence 47999999999999999999765432 358999886542 234566789999999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCChHHHHHhhc----------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceE
Q 008547 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKK----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 231 (562)
Q Consensus 162 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIl 231 (562)
+++++...+..++||||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999998874332 123688899999999999999999999999999999999
Q ss_pred eccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh--CCCCCCCCCh
Q 008547 232 FKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--GRRPFWDKTE 305 (562)
Q Consensus 232 l~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~--g~~pf~~~~~ 305 (562)
++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...+.
T Consensus 162 l~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 162 VG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred Ec---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 98 467899999999876543221 122345678999998754 56889999999999999988 6788877666
Q ss_pred hhHHHHHHhCC----CCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 306 DGIFKEVLRNK----PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 306 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......+.... ........+.+++.+.+|+.+||..||++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 55554432211 11111123457899999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=305.96 Aligned_cols=247 Identities=27% Similarity=0.415 Sum_probs=207.4
Q ss_pred eecceeeccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 99 TIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+.+.||.|+||.||+|.+..++ ..||+|++..... ......+..|+.+++.+ +||||+++++++.+.+..++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEE
Confidence 56788999999999999988766 8999999865432 22567889999999999 69999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
+|||+++++|.+.+.......+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceeccc
Confidence 99999999999988654433389999999999999999999999999999999999998 467899999999977654
Q ss_pred CCCcc--cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
..... ...+++.|+|||.+.+ ..+.++||||||+++|+|++ |.+||...........+........ ...++.+
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPPE 232 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHH
Confidence 32222 1236789999998854 45889999999999999998 8899988777777777665543222 2347899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++.+||..+|++|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999999999985
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=319.38 Aligned_cols=252 Identities=24% Similarity=0.360 Sum_probs=205.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-------CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
.+|.+++.||+|+||.||+|.+... +..||+|.+.... .......+.+|+.+++++.+||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 4799999999999999999976432 2368999876432 233567889999999999669999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
.+.+++|+||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~- 168 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT- 168 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc-
Confidence 999999999999999999886432 23478888999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||+++........ ....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+....+..
T Consensus 169 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 169 --EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred --CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 4788999999999765432211 12234567999998765 46889999999999999998 89999888777766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..+...... .....++.++.+|+.+||..+|.+||++.+++.+
T Consensus 247 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 247 KLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 666543221 1224578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=306.25 Aligned_cols=241 Identities=22% Similarity=0.312 Sum_probs=197.3
Q ss_pred ceeeccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 102 KLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+ +||||+++++++. ....++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876655 78999998765432 3456788999999999 5999999999876 4568999999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~ 258 (562)
+++|+|.+++... ..+++..+..++.|++.||.|||..+++|+||||+|||++ .++.+||+|||++.........
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 77 APLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcc
Confidence 9999999988543 4789999999999999999999999999999999999998 4788999999999866443321
Q ss_pred c----cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 259 Q----DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 259 ~----~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. ...++..|+|||.+.+ .++.++|||||||++|+|++ |..||......+....+...... .....++..+.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 228 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIY 228 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHH
Confidence 1 1123467999998765 45889999999999999998 99999877766665555444321 22245789999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..+|.+||++.++++
T Consensus 229 ~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 229 SIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=305.66 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=195.9
Q ss_pred eeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 103 LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999999765 445679999886542 234556789999999999 59999999998864 56899999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc--
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-- 258 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~-- 258 (562)
+++|.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++ .++.+||+|||++.........
T Consensus 78 ~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 78 GGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCcccee
Confidence 99999877532 35789999999999999999999999999999999999998 4788999999999765433221
Q ss_pred --ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 259 --QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 259 --~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+++.|+|||++.. ..+.++|||||||++|+|++ |..||.+....+....+..+... ...+..++++.++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l 230 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL---DCPAECPPEMYAL 230 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCCHHHHHH
Confidence 11223578999998764 45889999999999999996 99999887777666666554321 1224578999999
Q ss_pred HHHcCccCccCCCCHHHHhc
Q 008547 335 VKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~ 354 (562)
|.+||..+|++||++.++++
T Consensus 231 i~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 231 MKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=305.56 Aligned_cols=244 Identities=24% Similarity=0.365 Sum_probs=202.4
Q ss_pred ceeeccCCeEEEEEEEcC-CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 102 KLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+.||.|++|.||+|.+.. .+. .||||.+...... ...+.+.+|+.+++++. ||||+++++.+.. ..+++|+||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999998765 333 6999998765432 46678899999999994 9999999999988 889999999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC-
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 257 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~- 257 (562)
+++++|.+.+.......+++..+..++.|++.||.|||++|++|+||||+||+++ .++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc
Confidence 9999999988654435689999999999999999999999999999999999998 468999999999987644221
Q ss_pred ---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 258 ---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 258 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.....++..|+|||++.. .++.++|||||||++|+|++ |..||...+..+....+......... ...+|..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER--PEACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC--CccCCHHHH
Confidence 113456788999998865 56889999999999999998 99999887777776666543322221 235788999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||..+|++||++.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=308.48 Aligned_cols=248 Identities=23% Similarity=0.293 Sum_probs=204.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||+|+||.||+|.++.+|. .||+|.+..... ......+.+|+.+++.+ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence 478999999999999999999877665 589998765532 34567788999999999 59999999999887 78
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~~~ 158 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 158 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCccccc
Confidence 99999999999999987543 34589999999999999999999999999999999999998 477899999999987
Q ss_pred cCCCCCcc---cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
........ ...++..|+|||.+.. .++.++||||||+++|++++ |+.||.+....++...+..+.. +.. .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~ 235 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-LPQ--PPI 235 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-CCC--CCC
Confidence 65332221 1223567999998754 56889999999999999998 9999988777766666654432 111 234
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+..+.+++.+||..+|.+||++.++++
T Consensus 236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 236 CTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 6788999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=305.73 Aligned_cols=242 Identities=25% Similarity=0.399 Sum_probs=201.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|. .+++.||+|.+.... ....+.+|+.+++.+ +||||+++++++.... .++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~-~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKL-HHKNLVRLLGVILHNG-LYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCC-cEEE
Confidence 368999999999999999995 578899999886432 346788999999999 5999999999987654 7999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceecccc
Confidence 9999999999988665555689999999999999999999999999999999999998 4788999999998754322
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
......+..|+|||.+.+ .++.++|+|||||++|+|++ |+.||......+....+..+. .......+++.+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY---RMEPPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---CCCCCCcCCHHHHH
Confidence 122344568999998764 45889999999999999997 999998877766665554432 22233567899999
Q ss_pred HHHHcCccCccCCCCHHHHhc
Q 008547 334 FVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+||..+|.+||++.+++.
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=311.29 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=205.2
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++..+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence 468999999999999999998743 67889999886542 234456788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 230 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NI 230 (562)
..++|+||+++|+|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999885332 12478888999999999999999999999999999999
Q ss_pred EeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCCh
Q 008547 231 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTE 305 (562)
Q Consensus 231 ll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~ 305 (562)
+++ .++.++|+|||++........ ......++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+...
T Consensus 162 l~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred Eec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 998 578899999999875432211 122344667999998754 56889999999999999997 8899988777
Q ss_pred hhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+....+..+... . ..+.++.++.+|+.+||..+|.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 EEVIYYVRDGNVL-S--CPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHhcCCCC-C--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7776666544321 1 12357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=310.68 Aligned_cols=248 Identities=25% Similarity=0.342 Sum_probs=194.3
Q ss_pred cce-eecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--
Q 008547 96 RRY-TIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (562)
Q Consensus 96 ~~y-~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-- 168 (562)
++| ++.+.||+|+||+||++. ...++..||+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 345 899999999999998864 34568899999886542 223456788999999999 59999999998765
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+++||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~ 153 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGL 153 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeeccc
Confidence 3468999999999999988743 3589999999999999999999999999999999999998 468899999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh--h------------HH
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--G------------IF 309 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~------------~~ 309 (562)
+........ .....++..|+|||++.+ ..+.++||||||+++|+|++|..||...... + ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence 986543322 112345667999998764 4588999999999999999999998543211 0 00
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......... .+....++.++.+++.+||..+|++|||+.+++.
T Consensus 234 ~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 234 IELLERGMR--LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhhhcCCC--CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 111111111 1112357889999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=306.53 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=205.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
..|...+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCc
Confidence 368889999999999999999876665 69999886442 233456788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|..++... ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 82 MIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceec
Confidence 9999999999998887543 36789999999999999999999999999999999999998 4788999999998765
Q ss_pred CCCCCc--c--cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKKF--Q--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~~--~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... . ....++.|+|||++.. .++.++|||||||++|+|++ |..||...+..+....+.... ..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~ 234 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF---RLPAPMD 234 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC---CCCCCCC
Confidence 432211 1 1123457999998764 45889999999999999997 999998887777766665432 2122235
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.++.+++.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 235 CPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7889999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=304.49 Aligned_cols=247 Identities=23% Similarity=0.343 Sum_probs=203.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|+.+++.+ +|+||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEE
Confidence 457999999999999999999754 45679999876432 2456788999999999 59999999999887 77899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
+|||+++++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++ ..+.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeeccC
Confidence 99999999999988665556788999999999999999999999999999999999998 478999999999876543
Q ss_pred CCCc--ccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKKF--QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~~--~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.... ....++..|+|||++... .+.++|+|||||++|++++ |+.||.+.+.......+..... .+.....+.+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPENCPEE 231 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---CCCcccCCHH
Confidence 2221 123456779999988654 5789999999999999998 9999988776666665544322 2223467899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++.+||..+|++||++.+++.
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=310.54 Aligned_cols=253 Identities=19% Similarity=0.272 Sum_probs=200.2
Q ss_pred cceeecceeeccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i 159 (562)
++|++.+.||.|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCc
Confidence 479999999999999999985432 34469999886442 234567889999999999 59999
Q ss_pred ceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 008547 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 230 (562)
Q Consensus 160 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NI 230 (562)
+++++++...+..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+.||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999988854321 2477889999999999999999999999999999999
Q ss_pred EeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh--CCCCCCCCC
Q 008547 231 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPFWDKT 304 (562)
Q Consensus 231 ll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~--g~~pf~~~~ 304 (562)
|++ .++.++|+|||++........ .....+++.|+|||+.. +.++.++|||||||++|||++ |..||...+
T Consensus 162 li~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 162 LVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred EEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 998 478899999999876543221 12234467899999754 456889999999999999998 789997766
Q ss_pred hhhHHHHHHh---C-CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 305 EDGIFKEVLR---N-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 305 ~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+....... . ......+..+.+++.+.+|+.+||..||.+||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 239 DEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 6555443321 0 011111112357789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=307.36 Aligned_cols=250 Identities=20% Similarity=0.255 Sum_probs=204.1
Q ss_pred cceeecceeeccCCeEEEEEEEcC----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~ 170 (562)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.. +.
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGE 82 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence 479999999999999999999876 35789999876432 344567789999999999 59999999998765 57
Q ss_pred eEEEEEeccCCCChHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 171 YVYIAMELCEGGELLDRILAKKD------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
..+++++|+++++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++ .++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEEC
Confidence 78999999999999998854322 4589999999999999999999999999999999999998 47899999
Q ss_pred eccCccccCCCCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 245 DFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 245 DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|||+++........ ....++..|+|||++.+ .++.++|||||||++|++++ |+.||......+....+.... .+
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~ 238 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RL 238 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CC
Confidence 99999865433211 22345678999998765 45889999999999999998 999998776665554444332 11
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.....+++++.+++.+||..||++|||+.++++
T Consensus 239 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 --AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 223457899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=305.28 Aligned_cols=246 Identities=19% Similarity=0.290 Sum_probs=192.5
Q ss_pred ceeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++.+ +||||+++++++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 36899999999999754 3556799998865432 23445788999999999 5999999999999999999999999
Q ss_pred CCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 180 EGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 180 ~~g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
++|+|.+++.... ....++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcc
Confidence 9999998885432 22456778889999999999999999999999999999998 47889999999987543221
Q ss_pred C---cccccCCCcccCchhccc--------CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhC-CCCCCCCC
Q 008547 257 K---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN-KPDFRRKP 323 (562)
Q Consensus 257 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~~~~~ 323 (562)
. .....+++.|+|||++.+ .++.++||||||+++|+|++ |+.||......+........ ...+..+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 1 123457888999998753 23678999999999999996 99999776655544333222 12222221
Q ss_pred C-CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 324 W-PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 324 ~-~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. ...++.+.+++.+|| .+|++|||+.+++.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1 236788999999999 58999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=305.44 Aligned_cols=246 Identities=20% Similarity=0.302 Sum_probs=192.4
Q ss_pred ceeeccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 102 KLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+.....+|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence 358999999999996432 34578888775432 233456788999999999 5999999999999999999999999
Q ss_pred CCCChHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 180 EGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 180 ~~g~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
++|+|.+++..... ...++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEeccccccccccch
Confidence 99999998865432 2346778899999999999999999999999999999998 47889999999986543221
Q ss_pred C---cccccCCCcccCchhccc--------CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCC-CCCCCCC
Q 008547 257 K---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK-PDFRRKP 323 (562)
Q Consensus 257 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~~~~~ 323 (562)
. .....+++.|+|||++.. ..+.++|||||||++|+|++ |..||......+....+.... ..++.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 1 123345678999998642 34778999999999999999 788987776666555554432 2222222
Q ss_pred -CCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 324 -WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 324 -~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+++.+.+++..|| .||++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 2357788999999999 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=300.30 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=199.0
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
++||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence 36899999999999854 67899999876543 233455788999999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc--c
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF--Q 259 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~--~ 259 (562)
++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......... .
T Consensus 77 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 77 GDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceeccccccccCC
Confidence 9999887543 34688999999999999999999999999999999999998 4788999999998754332211 1
Q ss_pred cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHH
Q 008547 260 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337 (562)
Q Consensus 260 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 337 (562)
...+++.|+|||++.. .++.++||||||+++|++++ |..||.+.........+.... .......++..+.+++.+
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~ 229 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY---RMSCPQKCPDDVYKVMQR 229 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHH
Confidence 2234567999998864 45889999999999999998 999998877766665554432 222234578999999999
Q ss_pred cCccCccCCCCHHHHhc
Q 008547 338 LLVKDPRARLTAAQALS 354 (562)
Q Consensus 338 ~l~~dP~~Rps~~~~l~ 354 (562)
||..+|++||++.++++
T Consensus 230 ~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 230 CWDYKPENRPKFSELQK 246 (250)
T ss_pred HcccCcccCCCHHHHHH
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=336.74 Aligned_cols=255 Identities=31% Similarity=0.481 Sum_probs=197.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------- 168 (562)
.+|..++.||+||||.||+++++-+|+.||||+|.... .......+.+|+.+|.+| +|||||+++..|.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcccc
Confidence 45778899999999999999999999999999997664 345667899999999999 69999998765410
Q ss_pred -----------------------------------------------------------------------C--------
Q 008547 169 -----------------------------------------------------------------------D-------- 169 (562)
Q Consensus 169 -----------------------------------------------------------------------~-------- 169 (562)
+
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 008547 170 ---------------------------------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216 (562)
Q Consensus 170 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH 216 (562)
..+||=||||+...|.+.+..+.... ....+++++++|++||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 13688899998865555554433221 46778999999999999999
Q ss_pred HcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-------------------CCCCcccccCCCcccCchhccc--
Q 008547 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------------------PGKKFQDIVGSAYYVAPEVLKR-- 275 (562)
Q Consensus 217 ~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-- 275 (562)
++|||||||||.||+|+ .+..|||+|||+|.... +....+..+||.-|+|||++.+
T Consensus 715 ~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99999999999999999 57899999999997621 0113456789999999999854
Q ss_pred --CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHH
Q 008547 276 --KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 352 (562)
Q Consensus 276 --~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~ 352 (562)
.++.|+|+|||||||+||+. ||....+. .++..+..+..+.+...+-.--+.-..+|+.||+.||.+||||.++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eL 868 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATEL 868 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHH
Confidence 46889999999999999986 57554443 3444444333322211122223456789999999999999999999
Q ss_pred hcCccccc
Q 008547 353 LSHPWVRE 360 (562)
Q Consensus 353 l~hp~f~~ 360 (562)
|++.||-.
T Consensus 869 L~s~llpp 876 (1351)
T KOG1035|consen 869 LNSELLPP 876 (1351)
T ss_pred hhccCCCc
Confidence 99999864
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=301.97 Aligned_cols=245 Identities=22% Similarity=0.399 Sum_probs=203.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+.||.|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.+ +||||+++++++......++|+
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEE
Confidence 6889999999999999999875 467899998865432 345688999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
||+++++|.+++... ...+++..+..++.|++.||.|||+.+++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 79 EFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCc
Confidence 999999998877533 34688999999999999999999999999999999999998 47789999999987553321
Q ss_pred C--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 257 K--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 257 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+..+...+.. ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVY 231 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHH
Confidence 1 112335678999998764 55888999999999999998 99999877776666666544322221 23678999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+|+.+||..+|++||++.++++
T Consensus 232 ~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 232 ELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHHHHHcccChhhCCCHHHHHH
Confidence 9999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=307.66 Aligned_cols=241 Identities=17% Similarity=0.251 Sum_probs=190.6
Q ss_pred ceeeccCCeEEEEEEEcCCCC-------EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 102 KLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~-------~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
+.||.|+||.||+|.+..++. .||+|.+.... ....+.+..|+.+++.+ +||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 368999999999998765544 38888775432 23456788899999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-----CCCCeEEeeccCc
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-----EDSSLKATDFGLS 249 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-----~~~~vkl~DfG~a 249 (562)
||||+++|+|..++... ...+++..+..++.||+.||.|||++||+||||||+||+++..+ ..+.++++|||++
T Consensus 77 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 77 VQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred EEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 99999999999887543 34689999999999999999999999999999999999998522 1124799999998
Q ss_pred cccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCC-CCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
....+. ....+++.|+|||++.+ .++.++||||||+++|+|++|. .||........ ..+......++ +.
T Consensus 156 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~----~~ 227 (258)
T cd05078 156 ITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYEDRHQLP----AP 227 (258)
T ss_pred cccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHccccCC----CC
Confidence 655432 23468889999999865 3588999999999999999985 55544443332 23333332222 23
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+.++.+||.+||+.||++|||+.++++.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 228 KWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred CcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 55789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=332.06 Aligned_cols=343 Identities=21% Similarity=0.276 Sum_probs=220.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEE-----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA----- 165 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~----- 165 (562)
.++|.+.+.||+|+||.||+|.+..+ +..||+|++.... ..+.+..| .++.. .+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~-~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRA-CPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhh-chhhHHHHHHhhhccc
Confidence 35799999999999999999999888 8999999875432 11111111 11111 12222222211
Q ss_pred -EEcCCeEEEEEeccCCCChHHHHHhhcCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 008547 166 -FEDDNYVYIAMELCEGGELLDRILAKKDS------------------RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226 (562)
Q Consensus 166 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlk 226 (562)
...+..+++|+||+.+++|.+++...... ......+..++.||+.||.|||++||+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 24567899999999999998887533211 11234467899999999999999999999999
Q ss_pred CCceEeccCCCCCCeEEeeccCccccCCCC--CcccccCCCcccCchhcccC-----------------------CCCCc
Q 008547 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----------------------SGPES 281 (562)
Q Consensus 227 p~NIll~~~~~~~~vkl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----------------------~~~~~ 281 (562)
|+|||++. .++.+||+|||+|+...... .....++|+.|+|||.+... ++.++
T Consensus 283 P~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 283 PQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 99999984 35789999999998654332 23456899999999965321 23456
Q ss_pred chHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh-CCCCC-------CCCC----------CCCCCHHHHHHHHHcCccCc
Q 008547 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-NKPDF-------RRKP----------WPSISNSAKDFVKKLLVKDP 343 (562)
Q Consensus 282 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~-------~~~~----------~~~~~~~~~~ll~~~l~~dP 343 (562)
|||||||+||||+++..|+.. ....+...+. ..... .... +...+...++||.+||+.||
T Consensus 361 DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 999999999999997766432 1111111111 10000 0000 01123346689999999999
Q ss_pred cCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCH
Q 008547 344 RARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 423 (562)
Q Consensus 344 ~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~ 423 (562)
++|||+.++|+||||+....... ..+.++. ... +... .....+-...+...+..-+++.+|.++.
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~~~~-----~~~~~~~---~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~e 503 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGLLGL-----SVMQNLR---LQL-FRAT------QQDYGEAAAWVVFLMAKSGTEKEGGFTE 503 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCcccc-----ccccccc---ccc-chhh------HHHHHHHHHHHHHHHHhcCCCCCCCccH
Confidence 99999999999999987543211 1111110 000 0000 0000111223344444556778899999
Q ss_pred HHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHH
Q 008547 424 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465 (562)
Q Consensus 424 ~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~ 465 (562)
.++..+.... ..+.....-..+....+.+..|..++.+++.
T Consensus 504 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (566)
T PLN03225 504 AQLQELREKE-PKKKGSAQRNALASALRLQRKGVKTVARTVD 544 (566)
T ss_pred HHHHHhhhhc-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhh
Confidence 9999887442 2222222222488888889999999999974
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=308.33 Aligned_cols=249 Identities=27% Similarity=0.349 Sum_probs=197.5
Q ss_pred ceeecceeeccCCeEEEEEEE----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--C
Q 008547 97 RYTIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--N 170 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~ 170 (562)
.|++.+.||+|+||.||++.. ..++..||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 4578899999986442 234556789999999999 599999999998865 6
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..++||||++|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|+|||++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~ 157 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTK 157 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccc
Confidence 789999999999999887433 24689999999999999999999999999999999999998 47889999999998
Q ss_pred ccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh--------------hhHHHH
Q 008547 251 FIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--------------DGIFKE 311 (562)
Q Consensus 251 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~~ 311 (562)
....... .....++..|+|||++.+ .++.++|||||||++|+|++++.|+..... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 6543322 123456778999998764 458899999999999999998776532111 011111
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...... ..+.+..++..+.+|+.+||+.+|.+||++.++++
T Consensus 238 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 238 VLEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111111 12223568899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=297.26 Aligned_cols=259 Identities=24% Similarity=0.314 Sum_probs=213.5
Q ss_pred eecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+-+..||.|+||+|++-.++.+|+..|||.|..... .....+++.|.+...+-.+.||||++||.+-.++..||.||+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 446679999999999999999999999999987653 456778899999888888899999999999999999999999
Q ss_pred cCCCChH---HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 179 CEGGELL---DRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 179 ~~~g~L~---~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|.- +|. .++...+...+++..+..|....+.||.||-. ..|||||+||+||||+ ..|.|||||||.+..+..
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDVKLCDFGICGQLVD 220 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCEeeecccchHhHHH
Confidence 953 443 23334456789999999999999999999985 5899999999999999 589999999999987655
Q ss_pred CCCcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCC-hhhHHHHHHhCCCCCCCCC--CCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKP--WPSIS 328 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~ 328 (562)
+-..+.-.|...|||||.+.. ++..+|||||||++|||+.||..||..-+ ..+.+..+..+.+...... .-.++
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s 300 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYS 300 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccC
Confidence 444445578899999998853 46889999999999999999999996643 3445555555554332222 12478
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..+..+|..||..|-..||...+++.+||++.+..
T Consensus 301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV 335 (361)
T ss_pred HHHHHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence 89999999999999999999999999999997654
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=300.37 Aligned_cols=242 Identities=25% Similarity=0.333 Sum_probs=199.1
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCC
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
++||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+.+++.+ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 468999999999999877 99999998865533 23557789999999999 599999999999999999999999999
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc---
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF--- 258 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~--- 258 (562)
++|.+++... ...++...+..++.+++.||.|||+++++||||||+||+++ .++.+||+|||++.........
T Consensus 77 ~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 77 GSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCcceecc
Confidence 9999887543 34688999999999999999999999999999999999998 4788999999998765422111
Q ss_pred ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008547 259 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336 (562)
Q Consensus 259 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 336 (562)
....++..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+.... .......++.++.+++.
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~ 229 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY---RMPAPQLCPEEIYRLML 229 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC---CCCCCccCCHHHHHHHH
Confidence 11233567999998764 46889999999999999998 899997776655555554322 11122457889999999
Q ss_pred HcCccCccCCCCHHHHhc
Q 008547 337 KLLVKDPRARLTAAQALS 354 (562)
Q Consensus 337 ~~l~~dP~~Rps~~~~l~ 354 (562)
+||..+|.+||++.++++
T Consensus 230 ~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 230 QCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHhccChhhCcCHHHHHH
Confidence 999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=305.48 Aligned_cols=252 Identities=21% Similarity=0.368 Sum_probs=206.4
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|++.+.||.|+||.||+|..+. +.+.||+|.+..... ......+.+|+.+++++ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 468999999999999999998654 346799998765431 22457789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 171 YVYIAMELCEGGELLDRILAKKD-------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
..|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEE
Confidence 99999999999999998854431 2689999999999999999999999999999999999998 4788999
Q ss_pred eeccCccccCCCC--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 244 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 244 ~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
+|||++....... ......+++.|+|||.+.+ ..+.++||||||+++|+|++ |..||...........+..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999986543221 2233456778999998754 45788999999999999998 889997776666666655443332
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.. ...++..+.+++.+||..+|.+||++.+++..
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 22 23578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=303.21 Aligned_cols=248 Identities=24% Similarity=0.354 Sum_probs=202.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+|.+.+.||.|+||.||+|.+... ...||||...... .....+.+.+|+.+++.+ +||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence 3688999999999999999987544 3468999875442 134567889999999999 59999999998876 457
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||+++|+|.+++... ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeec
Confidence 8999999999999988543 34689999999999999999999999999999999999998 4788999999998765
Q ss_pred CCCCCcc--cccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
....... ...+++.|+|||.+.. .++.++||||||+++|+|++ |..||.+....+....+...... ...+.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~ 234 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNCP 234 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCC
Confidence 4432221 2234567999998764 45889999999999999986 99999888776666665544322 2235678
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+.+++.+||..+|.+|||+.+++.
T Consensus 235 ~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 235 PTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=302.98 Aligned_cols=252 Identities=29% Similarity=0.506 Sum_probs=207.0
Q ss_pred eeecceeeccCCeEEEEEEEcC-CCCEEEEEEeccccc-------CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 98 YTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM-------ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
|.+.+.||.|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7889999999999999999887 678999998753221 12234566778999887644799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 170 NYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+..++||||+++++|.+.+.. .....+++..++.++.|++.||.|||+ .|++|+||+|+||+++ .++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEecc
Confidence 999999999999999887743 234568999999999999999999996 7899999999999998 4788999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
|++.............|+..|+|||++.+. .+.++||||||+++|+|++|+.||...........+...... .....
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~ 236 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE--PLPEG 236 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC--cCCcc
Confidence 999876544444556789999999988653 588999999999999999999999777666555555443321 11122
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++++.++|.+||..||++||++.++..
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 47889999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=325.83 Aligned_cols=248 Identities=28% Similarity=0.474 Sum_probs=199.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC------
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN------ 170 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~------ 170 (562)
.+...+.||+|+||.||+|+++.+|+.||||.+..... ....+.+.+|+++|++|. |||||++++.-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccc
Confidence 46677889999999999999999999999999876542 345678899999999995 999999998766433
Q ss_pred eEEEEEeccCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~ 248 (562)
...+|||||.||+|...+... +...|++...+.++..++.||.|||++|||||||||.||++-... ....-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 568999999999999988543 335699999999999999999999999999999999999997532 345689999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhCCCCCCCCChh----hHHHHHHhCCCCCCC-
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRR- 321 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~- 321 (562)
|+.+..+......+||+.|.+||++. ..++..+|.|||||++|+++||..||...... ++...+....+.-..
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 99999888889999999999999987 45678899999999999999999999554332 233333332221100
Q ss_pred ---------CCC-------CCCCH----HHHHHHHHcCccCccCCC
Q 008547 322 ---------KPW-------PSISN----SAKDFVKKLLVKDPRARL 347 (562)
Q Consensus 322 ---------~~~-------~~~~~----~~~~ll~~~l~~dP~~Rp 347 (562)
-.| ..+++ .+...+..+|.++|++|.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 001 11222 245678889999999998
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=302.19 Aligned_cols=241 Identities=18% Similarity=0.199 Sum_probs=188.2
Q ss_pred ceeeccCCeEEEEEEEcC------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 102 KLLGHGQFGYTYVATDKA------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
+.||+|+||.||+|.... ....||+|.+.... ......+..|+.+++.+ +||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 368999999999997432 23358889875542 23445778899999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC----CCCCeEEee
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----EDSSLKATD 245 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~----~~~~vkl~D 245 (562)
...++||||+++|+|..++.. ....+++..++.++.||+.||.|||++||+||||||+|||++..+ ....++++|
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 999999999999998776643 345689999999999999999999999999999999999997421 112389999
Q ss_pred ccCccccCCCCCcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHH-hCCCCCCCCChhhHHHHHHhCCCCCCCC
Q 008547 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 246 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 322 (562)
||++..... .....++..|+|||++. ..++.++|||||||++|+|+ +|..||......+.. .........
T Consensus 156 ~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~--- 228 (262)
T cd05077 156 PGIPITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCML--- 228 (262)
T ss_pred CCCCccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccC---
Confidence 999865432 22346788999999875 34688999999999999998 588888665543332 222222111
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....++++.+||.+||+.||.+||++.+++++
T Consensus 229 -~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 229 -VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 12346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=304.45 Aligned_cols=247 Identities=26% Similarity=0.367 Sum_probs=198.1
Q ss_pred ceeeccCCeEEEEEEEcCCC------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 102 KLLGHGQFGYTYVATDKANG------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.||+|+||.||+|.+.... +.+|||.+.... .......+.+|+.+++.+ +||||+++++++......++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEE
Confidence 36899999999999876433 679999876432 123456788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC--CCCCeEEeeccC
Q 008547 176 MELCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGL 248 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~--~~~~vkl~DfG~ 248 (562)
|||+++++|.+++.... ...+++..+..++.||+.||.|||+.+++|+||||+||+++... ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999999886432 23478899999999999999999999999999999999998522 223799999999
Q ss_pred ccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCC
Q 008547 249 SDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 249 a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 323 (562)
+........ .....++..|+|||.+.+ ..+.++|||||||++|+|++ |..||......+....+.... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG---RLQK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC---ccCC
Confidence 876533221 112345678999998764 45889999999999999998 999998776666555554332 1122
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+|..+.++|.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 3467899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=299.88 Aligned_cols=228 Identities=22% Similarity=0.326 Sum_probs=186.0
Q ss_pred cCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCChHH
Q 008547 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186 (562)
Q Consensus 107 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~L~~ 186 (562)
|.||.||++.++.+|+.||+|.+.... ...+|...+... .||||+++++++......++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999986543 123344444455 49999999999999999999999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCc
Q 008547 187 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266 (562)
Q Consensus 187 ~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~ 266 (562)
.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++...... .....++..
T Consensus 75 ~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~--~~~~~~~~~ 147 (237)
T cd05576 75 HISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDS--CDGEAVENM 147 (237)
T ss_pred HHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhccccc--cccCCcCcc
Confidence 88543 4689999999999999999999999999999999999998 4778999999987655432 233456788
Q ss_pred ccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccC
Q 008547 267 YVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 345 (562)
Q Consensus 267 y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 345 (562)
|+|||.+.+ ..+.++||||+|+++|+|++|+.|+...... + ........ .+.+++.+.++|.+||+.||++
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~ 219 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLNI--PEWVSEEARSLLQQLLQFNPTE 219 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccCC--cccCCHHHHHHHHHHccCCHHH
Confidence 999998864 4588999999999999999999887543221 0 00111111 1347889999999999999999
Q ss_pred CCCH-----HHHhcCccc
Q 008547 346 RLTA-----AQALSHPWV 358 (562)
Q Consensus 346 Rps~-----~~~l~hp~f 358 (562)
||++ .++++||||
T Consensus 220 R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 220 RLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred hcCCCccchHHHHcCCCC
Confidence 9986 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=303.89 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=195.4
Q ss_pred cceeecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--C
Q 008547 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~ 169 (562)
.+|++.+.||+|+||.||+|. +..++..||+|.+.... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 368999999999999999997 34578899999986542 33456789999999999 59999999998753 4
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
..+++|+||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~ 155 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDFGLT 155 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCCccc
Confidence 5689999999999999987533 34689999999999999999999999999999999999998 4788999999999
Q ss_pred cccCCCCCc----ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh---------------HH
Q 008547 250 DFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---------------IF 309 (562)
Q Consensus 250 ~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------~~ 309 (562)
......... ....++..|+|||++.+ .++.++||||||+++|||++|..|+......- .+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 876433221 11223456999998765 45889999999999999999877764332110 01
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+......+ +....++.++.+|+.+||..+|++|||+.++++
T Consensus 236 ~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 236 IELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1122222111 222467889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=306.71 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=199.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 368899999999999999999887776 46888776443 233445688999999999 599999999988754 4
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++++||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARL 158 (303)
T ss_pred ceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEcccccccc
Confidence 67899999999999887543 34688999999999999999999999999999999999997 467899999999986
Q ss_pred cCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... .....++..|+|||++.+ ..+.++|||||||++|+|++ |..||.+.........+ .....+. ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~--~~~~ 235 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLP--QPPI 235 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCC--CCCC
Confidence 543222 123345778999998765 45889999999999999997 99999776654444333 3332222 2245
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+..+.+++.+||..+|++||++.++++
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 236 CTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=299.13 Aligned_cols=243 Identities=23% Similarity=0.285 Sum_probs=191.9
Q ss_pred ceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE-cCCeEEEEEe
Q 008547 102 KLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DDNYVYIAME 177 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~-~~~~~~lv~e 177 (562)
+.||+|+||.||+|.+.. .+..||+|.+.... .......+.+|+.+++.+ +||||+++++++. .++..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998653 34579999875432 234567788999999999 5999999999775 4666899999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
|+.+|+|.+++... ...+++..+..++.||+.||.|||+.+++||||||+|||++ .++.+||+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 78 YMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCcc
Confidence 99999999987543 34567888899999999999999999999999999999998 47789999999987543221
Q ss_pred ----CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 257 ----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 257 ----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
......+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||...........+..+... . ....+++.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 230 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL-L--QPEYCPDP 230 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-C--CCCcCCHH
Confidence 1123345778999998754 56889999999999999999 56677666665555555443221 1 11346889
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++.+||..+|++||++.+++.
T Consensus 231 ~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 231 LYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=303.25 Aligned_cols=240 Identities=17% Similarity=0.191 Sum_probs=188.9
Q ss_pred eeeccCCeEEEEEEEcCC------------------------CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC
Q 008547 103 LLGHGQFGYTYVATDKAN------------------------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~------------------------~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~ 158 (562)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcC-CCCC
Confidence 599999999999974322 2358888875432 22445688899999999 5999
Q ss_pred cceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC--
Q 008547 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-- 236 (562)
Q Consensus 159 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-- 236 (562)
|+++++++......++||||+++|+|...+.. ..+.+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence 99999999999999999999999999877643 345789999999999999999999999999999999999997421
Q ss_pred --CCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHH-hCCCCCCCCChhhHHHH
Q 008547 237 --EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 --~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~ 311 (562)
....+||+|||++...... ....++..|+|||.+.+ .++.++|||||||++|||+ +|..||......+...
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~- 232 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER- 232 (274)
T ss_pred cCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-
Confidence 2335899999987643221 22357888999998864 3588999999999999985 6999997765544433
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
........+ ...++.+.++|.+||..+|++||++.++|++
T Consensus 233 ~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 233 FYEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 222222222 2245789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=299.93 Aligned_cols=238 Identities=17% Similarity=0.205 Sum_probs=188.9
Q ss_pred ceeeccCCeEEEEEEEcCCC----------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 102 KLLGHGQFGYTYVATDKANG----------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+.||+|+||.||+|.+..++ ..|++|.+..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 36899999999999988776 3477887654421 257788999999999 59999999999888 77
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC----CCCCeEEeecc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----EDSSLKATDFG 247 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~----~~~~vkl~DfG 247 (562)
.++||||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++... ....+||+|||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 899999999999998885443 2689999999999999999999999999999999999998422 11279999999
Q ss_pred CccccCCCCCcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 323 (562)
++..... .....++..|+|||++.+. ++.++||||||+++|+|++ |..||............. .....+.
T Consensus 154 ~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-- 227 (259)
T cd05037 154 IPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPM-- 227 (259)
T ss_pred ccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCC--
Confidence 9876543 2234567889999998654 5889999999999999999 578886665433333222 1111111
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+ ....+.++|.+||..+|.+||++.++++
T Consensus 228 -~-~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 228 -P-DCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -C-CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 1 2378999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=325.75 Aligned_cols=248 Identities=25% Similarity=0.402 Sum_probs=216.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...|.+.||.|.||+||.|+.+..|+ .||||.++... ...+..+|+.|+.||-++ +||||++|.|+......++
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeE
Confidence 45788899999999999999887774 69999997543 345788999999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||+|||++|+|..+|..+. +.++..++.-+++.|+.|+.||-++++|||||...|||+++ +..+|++|||+++.+.
T Consensus 707 IiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs---nLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLE 782 (996)
T ss_pred EEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc---ceEEEeccccceeecc
Confidence 9999999999998886554 66999999999999999999999999999999999999994 8899999999999875
Q ss_pred CCCC--cccccC--CCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 254 PGKK--FQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~~~--~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.+.. +++..| ..+|.|||.+. .+++.+|||||+||++||.++ |..|||+.++.+++..+..+. +.++..++
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy---RLPpPmDC 859 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY---RLPPPMDC 859 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc---CCCCCCCC
Confidence 5432 222222 46899999875 567999999999999999775 999999999999999998764 44444678
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
|..+..|+..||++|-.+||...+|+.
T Consensus 860 P~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 860 PAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred cHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 999999999999999999999999874
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=312.61 Aligned_cols=244 Identities=25% Similarity=0.418 Sum_probs=206.0
Q ss_pred eecceeeccCCeEEEEEEEcC--CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 99 TIGKLLGHGQFGYTYVATDKA--NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~--~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+.+.||.|.||.||+|.... .|+ -||||+.+... .+...+.|+.|..+|+.+ +||||++++|+|.+. ..||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-ceeE
Confidence 346689999999999997543 233 58889876543 355689999999999999 699999999998765 4899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||+++-|.|..++..++ ..++......++.||+.||.|||+..+|||||-..|||+.+ ..+|||+|||+++.+..
T Consensus 468 vmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cceeeecccchhhhccc
Confidence 999999999999986554 56899999999999999999999999999999999999985 77999999999998876
Q ss_pred CCCcccccC--CCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
...+....| ..-|||||.++ ..++.++|||-||+++||++. |..||.+....+++-.+.++.. .+..+++|+.
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR---lP~P~nCPp~ 620 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER---LPCPPNCPPA 620 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC---CCCCCCCChH
Confidence 655443333 44699999886 467999999999999999887 9999999888888777766653 3334689999
Q ss_pred HHHHHHHcCccCccCCCCHHHHh
Q 008547 331 AKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
+..|+.+||.++|.+||...++.
T Consensus 621 LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 621 LYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred HHHHHHHHhccCcccCCcHHHHH
Confidence 99999999999999999887764
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=300.35 Aligned_cols=249 Identities=20% Similarity=0.334 Sum_probs=199.5
Q ss_pred eeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC----
Q 008547 98 YTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~---- 170 (562)
|.+.+.||+|+||.||+|.+. .+++.||||.+..... .....+.+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 567889999999999999854 3578999998865432 334567788999999999 5999999999886432
Q ss_pred --eEEEEEeccCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 171 --YVYIAMELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
..+++++|+.+|+|..++.... ...++...+..++.||+.||.|||++||+||||||+||+++ .++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEEC
Confidence 3478999999999987764322 23578999999999999999999999999999999999998 47889999
Q ss_pred eccCccccCCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 245 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 245 DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|||+++....... .....+++.|++||.+... .+.++|||||||++|+|++ |++||.+....+....+......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 234 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL- 234 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 9999886543321 1223456789999987654 5788999999999999999 89999877766666655543321
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. ..+..+..+.+++.+||..+|++|||+.+++.
T Consensus 235 ~--~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 235 K--QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 12457789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=298.70 Aligned_cols=245 Identities=18% Similarity=0.279 Sum_probs=191.9
Q ss_pred eeeccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 103 LLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.||+|+||.||+|..... ...+++|.+.... .......+.+|+.+++.+ +||||+++++.+......|+||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 589999999999974333 3356677665432 223567889999999999 59999999999999999999999999
Q ss_pred CCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC--
Q 008547 181 GGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-- 256 (562)
Q Consensus 181 ~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-- 256 (562)
+|+|.+++.... ...++...+..++.||+.||.|||+.+++||||||+|||++ .++.+||+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccccccccCcchhh
Confidence 999999886432 23466778889999999999999999999999999999998 47889999999986432211
Q ss_pred -CcccccCCCcccCchhccc--------CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC-CCCCC-CC
Q 008547 257 -KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP-DFRRK-PW 324 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~-~~~~~-~~ 324 (562)
.....++++.|+|||++.. ..+.++|||||||++|+|++ |..||......+.+..+..... ....+ ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 1234578899999998742 23678999999999999997 5778877777666666654432 21222 22
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+++.+.+++..|| .+|++||++.++++
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 346788999999999 68999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=303.67 Aligned_cols=250 Identities=17% Similarity=0.221 Sum_probs=184.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhh--------HHHHHHHHHHHHHccCCCCcce
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIA--------VEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
...++|++.+.||+|+||.||+|.+..+ +..+|+|+........... ......+...+..+ +|++|+.
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence 3456899999999999999999998877 6677887643322110000 01112233344455 5999999
Q ss_pred EEEEEEcCC----eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 162 FYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 162 l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
+++.+.... ..+++++++. .++.+.+.. ....++..++.++.||+.||.|||+.+|+||||||+|||++ .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~ 161 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---G 161 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---C
Confidence 998765433 4578888874 356555422 23467888999999999999999999999999999999998 4
Q ss_pred CCCeEEeeccCccccCCCC--------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhh-
Q 008547 238 DSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG- 307 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~- 307 (562)
++.++|+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.....
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 6789999999997653221 11234799999999988654 5889999999999999999999997763322
Q ss_pred HH--------HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 308 IF--------KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 308 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.. ..+..+. ...+..++.+.+++..||..+|++||++.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHhHHHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11 2222211 123457899999999999999999999999874
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=300.92 Aligned_cols=143 Identities=28% Similarity=0.406 Sum_probs=126.2
Q ss_pred ccccccccc-cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCC-------CC
Q 008547 87 DFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-------EN 158 (562)
Q Consensus 87 ~~~~~~~~~-~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-------p~ 158 (562)
.....+.|. .+|.+.++||-|.|++||+|.|..+.+.||+|+++... ...+..+.||.+|++++.+ .+
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 344566777 89999999999999999999999999999999987653 4567788999999998743 37
Q ss_pred cceEEEEEE----cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEec
Q 008547 159 VVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFK 233 (562)
Q Consensus 159 iv~l~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~ 233 (562)
||+|++.|. .+.++|||+|++ |.+|+..+.....+.++...++.|++||+.||.|||+ .||||.||||+||||.
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999997 466899999999 8899999988888999999999999999999999996 5999999999999994
Q ss_pred c
Q 008547 234 S 234 (562)
Q Consensus 234 ~ 234 (562)
.
T Consensus 223 ~ 223 (590)
T KOG1290|consen 223 S 223 (590)
T ss_pred c
Confidence 3
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=301.19 Aligned_cols=250 Identities=26% Similarity=0.403 Sum_probs=199.5
Q ss_pred cceeecceeeccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--C
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~ 169 (562)
+.|.+.+.||+|+||.||+|.+. .++..||+|.+...... .....+.+|+.+++.+ .||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 36788899999999999999854 34789999998765432 3567899999999999 59999999999887 6
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
...++||||+++++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~ 156 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLA 156 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccccc
Confidence 68999999999999998885432 3589999999999999999999999999999999999998 4689999999999
Q ss_pred cccCCCCCc----ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh--------------HHH
Q 008547 250 DFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--------------IFK 310 (562)
Q Consensus 250 ~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------------~~~ 310 (562)
......... ....++..|+|||.+.+ ..+.++||||||+++|+|++|..|+....... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 876533221 12244567999998754 45889999999999999999999985532211 112
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+...... .....++.++.+|+.+||..+|.+||++.+++.
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 237 ELLKEGERL--PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHcCCcC--CCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 222222222 122456789999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=309.37 Aligned_cols=263 Identities=26% Similarity=0.436 Sum_probs=217.7
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-----CCCCcceEEE
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYN 164 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~l~~ 164 (562)
+.+.+..+|.|....|+|=|++|..|.+...|..||||+|..+.. ....=+.|++||++|. +--|++.|+.
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 345577899999999999999999999999999999999987643 4455578999999996 2458999999
Q ss_pred EEEcCCeEEEEEeccCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 165 AFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 165 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
.|...+++|||+|.+ ..+|.+.|..- .+-.|....++.++.||..||..|-..||+|.||||+|||++. ....+||
T Consensus 502 ~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE--~k~iLKL 578 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE--SKNILKL 578 (752)
T ss_pred HhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc--Ccceeee
Confidence 999999999999998 45888887432 3345888999999999999999999999999999999999984 5678999
Q ss_pred eeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC
Q 008547 244 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 322 (562)
||||.|.++..+.. +.+..+..|.|||++.| .|....|+||+||+||||+||+..|++.+...++...+.-...|+..
T Consensus 579 CDfGSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 579 CDFGSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred ccCccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 99999988765443 45566788999998876 57999999999999999999999999998887777655433333321
Q ss_pred C-------------------------------------------------CCCCC-------HHHHHHHHHcCccCccCC
Q 008547 323 P-------------------------------------------------WPSIS-------NSAKDFVKKLLVKDPRAR 346 (562)
Q Consensus 323 ~-------------------------------------------------~~~~~-------~~~~~ll~~~l~~dP~~R 346 (562)
. .+.++ ..+.+||..||..||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 0 00112 247899999999999999
Q ss_pred CCHHHHhcCccccc
Q 008547 347 LTAAQALSHPWVRE 360 (562)
Q Consensus 347 ps~~~~l~hp~f~~ 360 (562)
.|..++|.||||++
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999974
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=305.61 Aligned_cols=258 Identities=23% Similarity=0.318 Sum_probs=211.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
......+.++||+|-||+|.+|. ...+..||+|+++.... ......|.+|+.+|.+|+ ||||+.++++|..++.++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchH
Confidence 34467889999999999999997 34468999999976543 345689999999999995 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|+||+++|+|.+++.++.-..+.......|+.||++|++||.+.++|||||.+.|+|++ +++++||+|||+++.+-
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~---~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD---GEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec---CcccEEecCcccccccc
Confidence 999999999999999776444455667788999999999999999999999999999999 68999999999999765
Q ss_pred CCCCcc---cccCCCcccCchh-cccCCCCCcchHHHHHHHHHHHh--CCCCCCCCChhhHHHHHHhCCCC----CCCCC
Q 008547 254 PGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEVLRNKPD----FRRKP 323 (562)
Q Consensus 254 ~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~ 323 (562)
.+..+. ..+-..+|||||. +.++.++++|+|+||+++||+++ ...||...+.+.+.++.-.-... .....
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence 554432 3355689999996 56788999999999999999765 78999888887777665332111 11112
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.+-+|..+.++|.+||..|.++||+.+++ |-+|++
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq~ 803 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQE 803 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHHH
Confidence 24578899999999999999999999998 444443
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=313.61 Aligned_cols=255 Identities=24% Similarity=0.331 Sum_probs=217.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCC-C--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANG-D--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~-~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...+.++||+|+||.|++|.|+..+ + .||||.+...... .....|++|+.+|.+|. |||+++|||+..+ ..+.
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhh
Confidence 4677889999999999999887543 2 5999998766542 27789999999999995 9999999999988 6688
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||+|+++.|+|++.|.......|.......++.||+.|+.||.++++|||||-..|+||-+ ...|||+||||.+-+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cceeeeecccceeccC
Confidence 9999999999999997766678889999999999999999999999999999999999984 6789999999999887
Q ss_pred CCCCccccc----CCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 254 PGKKFQDIV----GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~~~~~~~~----gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.+..+..+. -...|+|||.++. .++.++|||+|||++|||++ |..||.+.....+++.+-.+... .. .+.+
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erL-pR--Pk~c 340 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERL-PR--PKYC 340 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccC-CC--CCCC
Confidence 666554332 2456999999975 57999999999999999998 89999999999999988754432 22 2468
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++.+.+++..||..+|.+||++..|...-+..+.
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 8999999999999999999999999766565553
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=286.68 Aligned_cols=253 Identities=30% Similarity=0.515 Sum_probs=206.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~----- 170 (562)
.+|.-++.+|.|+- .|..+.+.-+++.||+|++.... ..........+|..++..+ +|+||++++.+|....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHH
Confidence 47888999999998 78888899999999999987653 3344566778999999999 5999999999997543
Q ss_pred -eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 171 -YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 171 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
.+|+|||+|.. +|.+.+. -.+.-..+..++.|++.|++|||+.||+||||||+||++. .+..+||.|||+|
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~---~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN---SDCTLKILDFGLA 165 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec---chhheeeccchhh
Confidence 58999999954 8887774 2367788999999999999999999999999999999998 4789999999999
Q ss_pred cccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh--------------
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------------- 314 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-------------- 314 (562)
+.....-..+.++.|..|+|||++.+ ++...+||||+||++.||++|+..|.+.+.-+.+.++..
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred cccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 88766656778899999999998765 467889999999999999999999987765444333321
Q ss_pred --------CCCC---------CCCCCCCC-------CCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 315 --------NKPD---------FRRKPWPS-------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 315 --------~~~~---------~~~~~~~~-------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
..+. ++...|+. -+..+++++.+||..||++|.|++++|+||||+
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 1111 11111211 123578999999999999999999999999998
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=307.72 Aligned_cols=260 Identities=22% Similarity=0.286 Sum_probs=187.7
Q ss_pred ccceeecceeeccCCeEEEEEEEc----------------CCCCEEEEEEecccccCc-----------hhhHHHHHHHH
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK----------------ANGDRVAVKKIEKNKMIL-----------PIAVEDVKREV 147 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~----------------~~~~~vaiK~~~~~~~~~-----------~~~~~~~~~E~ 147 (562)
.++|.+.++||+|+||.||+|.+. ..++.||||.+....... ....+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 457999999999999999999642 245679999985432110 00112234577
Q ss_pred HHHHHccCCCC-----cceEEEEEEc--------CCeEEEEEeccCCCChHHHHHhhcC---------------------
Q 008547 148 KILQALAGHEN-----VVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKKD--------------------- 193 (562)
Q Consensus 148 ~~l~~l~~hp~-----iv~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------- 193 (562)
.++.++. |.+ ++.++++|.. .+..|+||||+++++|.+++.....
T Consensus 224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 7777775 443 3667776643 3568999999999999988753211
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCccc--ccCCCcccCc
Q 008547 194 -SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAP 270 (562)
Q Consensus 194 -~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~--~~gt~~y~aP 270 (562)
..+++..++.++.|++.||.|||+.+|+||||||+|||++ .++.+||+|||++........... ..+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1245677889999999999999999999999999999998 467899999999976544333222 2348899999
Q ss_pred hhcccCC-----------------------CCCcchHHHHHHHHHHHhCCC-CCCCCChh-----------hHHHHHHhC
Q 008547 271 EVLKRKS-----------------------GPESDVWSIGVITYILLCGRR-PFWDKTED-----------GIFKEVLRN 315 (562)
Q Consensus 271 E~~~~~~-----------------------~~~~DiwslG~il~el~~g~~-pf~~~~~~-----------~~~~~~~~~ 315 (562)
|.+.... ..+.||||+||++|+|++|.. ||.+.... ...+.+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9874311 134799999999999999875 66432111 111111112
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHcCccCc---cCCCCHHHHhcCccccc
Q 008547 316 KPDFRRKPWPSISNSAKDFVKKLLVKDP---RARLTAAQALSHPWVRE 360 (562)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP---~~Rps~~~~l~hp~f~~ 360 (562)
.+....+...++.+++|+.+||..+| .+|+|+.++|+||||..
T Consensus 460 --~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 460 --KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred --CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 22333566789999999999999766 78999999999999965
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=281.80 Aligned_cols=242 Identities=44% Similarity=0.747 Sum_probs=202.9
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCChHHH
Q 008547 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187 (562)
Q Consensus 108 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 187 (562)
+||.||+|.+..+|+.+|+|++....... ....+.+|+..++++ +|+||+++++.+......++++||+++++|.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999998889999999987654322 167889999999999 699999999999999999999999999999988
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcc
Q 008547 188 ILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267 (562)
Q Consensus 188 l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y 267 (562)
+... ..++...+..++.+++.++.+||+.+++|+||+|+||+++ .++.++|+|||.+.............++..|
T Consensus 78 ~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T smart00220 78 LKKR--GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGLLTTFVGTPEY 152 (244)
T ss_pred HHhc--cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccccccccCCcCC
Confidence 7543 3389999999999999999999999999999999999998 4689999999999877655455566789999
Q ss_pred cCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCC-CChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccC
Q 008547 268 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 345 (562)
Q Consensus 268 ~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 345 (562)
+|||.+.+ ..+.++||||||+++++|++|..||.. .........+...... ....+..++.++.+++.+||..+|++
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~ 231 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP-FPPPEWKISPEAKDLIRKLLVKDPEK 231 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC-CccccccCCHHHHHHHHHHccCCchh
Confidence 99998864 457899999999999999999999977 3444444444333322 22222227889999999999999999
Q ss_pred CCCHHHHhcCccc
Q 008547 346 RLTAAQALSHPWV 358 (562)
Q Consensus 346 Rps~~~~l~hp~f 358 (562)
||++.++++||||
T Consensus 232 Rp~~~~~~~~~~~ 244 (244)
T smart00220 232 RLTAEEALQHPFF 244 (244)
T ss_pred ccCHHHHhhCCCC
Confidence 9999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=286.36 Aligned_cols=255 Identities=30% Similarity=0.514 Sum_probs=202.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
...|.++++||.|+|+.||++.+.. .+.+||+|.+.... ....+.+|+++|..+.++.||+++.+++..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3468999999999999999998877 78899999987654 446688999999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+.+|+||++..+..+++ ..++...++.+++.++.||.++|.+|||||||||+|+|.+. ..+.-.|+|||+|..
T Consensus 110 v~ivlp~~~H~~f~~l~-----~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLY-----RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQR 182 (418)
T ss_pred eEEEecccCccCHHHHH-----hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHHH
Confidence 99999999998877766 35778999999999999999999999999999999999986 566788999999861
Q ss_pred c-----------------CC--CC--------------------------CcccccCCCcccCchhccc--CCCCCcchH
Q 008547 252 I-----------------KP--GK--------------------------KFQDIVGSAYYVAPEVLKR--KSGPESDVW 284 (562)
Q Consensus 252 ~-----------------~~--~~--------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~Diw 284 (562)
. .+ +. ......||++|+|||++.. ..++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 1 00 00 0012479999999999865 348899999
Q ss_pred HHHHHHHHHHhCCCCCCCCChh-hH------------HHHHH--hCC-------------------CCC-----------
Q 008547 285 SIGVITYILLCGRRPFWDKTED-GI------------FKEVL--RNK-------------------PDF----------- 319 (562)
Q Consensus 285 slG~il~el~~g~~pf~~~~~~-~~------------~~~~~--~~~-------------------~~~----------- 319 (562)
|.|+|++.+++++.||.....+ .. +++.. .+. ...
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 9999999999999999543221 00 00000 000 000
Q ss_pred --CCCCCCC-CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 320 --RRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 320 --~~~~~~~-~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
....|.+ .+..+.+|+.+||..||.+|+||+++|+||||.+.
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 0011112 34578999999999999999999999999999953
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=275.25 Aligned_cols=255 Identities=30% Similarity=0.444 Sum_probs=201.8
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----eEEE
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYI 174 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-----~~~l 174 (562)
-.+.||.|+||.||.+.+..+|+.||+|++..-. ..-...+.+.+|+.+|..++ |.|++..++..+... .+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHH
Confidence 3467999999999999999999999999885432 22345678889999999995 999999988776543 4678
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+|++.. +|...+ ..-+.++...++.+++||+.||.|||+.+|.||||||.|.|+++ +..+||||||+++....
T Consensus 135 ~TELmQS-DLHKII--VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---NCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKII--VSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---NCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhhee--ccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---CceEEecccccccccch
Confidence 8888854 665555 33467999999999999999999999999999999999999984 78999999999987654
Q ss_pred CC--CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH-----------------
Q 008547 255 GK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL----------------- 313 (562)
Q Consensus 255 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~----------------- 313 (562)
.. .++..+.|..|+|||++.| .|+.++||||+|||+.||+..+..|...+.-+.+..+.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 33 3445577899999999876 57999999999999999999999998777655444332
Q ss_pred ------hCCCCCCCC-CC------CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 314 ------RNKPDFRRK-PW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 314 ------~~~~~~~~~-~~------~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+.....+.. .. ..-..+...++..+|.+||.+|.+..+++.|++..+..
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 111111100 00 01234677899999999999999999999999988754
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=305.64 Aligned_cols=252 Identities=30% Similarity=0.502 Sum_probs=197.7
Q ss_pred eeecceeeccCCeE-EEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 98 YTIGKLLGHGQFGY-TYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 98 y~i~~~lG~G~~g~-Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
|.-.+++|.|+.|+ ||+|. ..|+.||||.+-.. ...-+.+|+..|+.-..|||||++|+.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 34456789998885 69996 56889999987543 34567899999999889999999999999999999999
Q ss_pred eccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--CCCCCeEEeeccCcccc
Q 008547 177 ELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDSSLKATDFGLSDFI 252 (562)
Q Consensus 177 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~--~~~~~vkl~DfG~a~~~ 252 (562)
|+|. .+|.+++... ..........+.++.|+++||++||+.+||||||||.||||... .....++|+|||+++..
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9995 5998888542 11111224567889999999999999999999999999999864 23457999999999987
Q ss_pred CCCCC----cccccCCCcccCchhcccCC-CCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKK----FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~----~~~~~gt~~y~aPE~~~~~~-~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..+.. ..+..||.+|+|||++.... ..++||||||||+|+.++ |..||.+... -..+|+.+......-. +.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~-~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLE-PL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeec-cC
Confidence 66543 34568999999999997654 678999999999999888 5999955433 2334555544332211 11
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
-..++.+||.+|++++|..||+|.++|.||+|=..
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 12289999999999999999999999999999653
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=299.17 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=203.9
Q ss_pred eeecceeeccCCeEEEEEEEc----C---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 98 YTIGKLLGHGQFGYTYVATDK----A---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~----~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..+.+.||.|+||.|++|.-. . ....||||.+..... ....+.+..|+.+|+.+..||||+.++++|...+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 356779999999999999632 1 145799998865543 2567889999999999988999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK------------D--SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
.+++|+||+..|+|.+++...+ . ..++......++.||+.|++||++..+|||||-.+|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~--- 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT--- 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---
Confidence 9999999999999999997655 0 1388999999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCCCcc--cccC--CCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCC-hhhHH
Q 008547 237 EDSSLKATDFGLSDFIKPGKKFQ--DIVG--SAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT-EDGIF 309 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~-~~~~~ 309 (562)
.+..+||+|||+|+.......+. ...+ ...|||||.+.. .++.++|||||||+|||+++ |..||.+.. ..+++
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~ 532 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL 532 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH
Confidence 57899999999998765443332 1222 235999999876 56999999999999999998 999998865 45555
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+..+. .... ...+++++.++++.||+.+|++||+..++..
T Consensus 533 ~~l~~G~-r~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 533 EFLKEGN-RMEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHhcCC-CCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 5343333 2222 2457899999999999999999999999863
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=271.05 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=191.1
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHH--ccCCCCcceEEEEEEc
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA--LAGHENVVKFYNAFED 168 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~hp~iv~l~~~~~~ 168 (562)
...+.++..+.+.||+|.||+||+|. ..|+.||||++... ....+.+|.+|.+. | +|+||+.+++.-..
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~sr------dE~SWfrEtEIYqTvmL-RHENILgFIaaD~~ 276 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSR------DERSWFRETEIYQTVML-RHENILGFIAADNK 276 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecc--ccCCceEEEEeccc------chhhhhhHHHHHHHHHh-ccchhhhhhhcccc
Confidence 34566789999999999999999996 56899999998654 34667888888764 4 59999999987653
Q ss_pred C----CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeccCC
Q 008547 169 D----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 169 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~iiHrDlkp~NIll~~~~ 236 (562)
+ ..+|||++|-+.|+|+++|.. ..++.+.++.++..+++||++||.. .|.|||||..|||+.
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK--- 350 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--- 350 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc---
Confidence 3 369999999999999999954 5689999999999999999999963 599999999999998
Q ss_pred CCCCeEEeeccCccccCCCC-----CcccccCCCcccCchhcccCC-------CCCcchHHHHHHHHHHHhC--------
Q 008547 237 EDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCG-------- 296 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DiwslG~il~el~~g-------- 296 (562)
.++.+-|+|+|||....... .....+||.+|||||++.... ...+||||||.|+||++..
T Consensus 351 kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~e 430 (513)
T KOG2052|consen 351 KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVE 430 (513)
T ss_pred cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEeh
Confidence 58999999999997554332 234679999999999997543 3458999999999999762
Q ss_pred --CCCCCCCCh----hhHHHHHHhCCC--CCCCCCCCCCC--HHHHHHHHHcCccCccCCCCHHHHh
Q 008547 297 --RRPFWDKTE----DGIFKEVLRNKP--DFRRKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 297 --~~pf~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
.+||.+... .+..+++..-.. ...+..|...+ ..+..+|+.||..+|.-|.||-.+.
T Consensus 431 ey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 431 EYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred hhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 578865322 223333322111 11222343322 2366889999999999999987664
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=274.62 Aligned_cols=239 Identities=26% Similarity=0.380 Sum_probs=187.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-CCCCcceEEEEEEcCC----e
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFYNAFEDDN----Y 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~hp~iv~l~~~~~~~~----~ 171 (562)
..++.++||+|.||.||+|. -+++.||||++.. +..+.|.+|-+|.+... .|+||++++++-.... .
T Consensus 211 pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhh--ccCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 45778899999999999995 5679999999854 36678899988887542 5999999999876555 8
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc---------CceeccCCCCceEeccCCCCCCeE
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---------~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
++||++|.+.|+|.++|..+ .+++....+++.-|++||+|||+. .|+|||||..|||+. .+.++.
T Consensus 283 ywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK---~DlTcc 356 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK---NDLTCC 356 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc---cCCcEE
Confidence 99999999999999999544 589999999999999999999963 599999999999998 589999
Q ss_pred EeeccCccccCCCCC---cccccCCCcccCchhcccCCC-------CCcchHHHHHHHHHHHhCCCCCC-----------
Q 008547 243 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-------PESDVWSIGVITYILLCGRRPFW----------- 301 (562)
Q Consensus 243 l~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~il~el~~g~~pf~----------- 301 (562)
|+|||+|..+.++.. ....+||.+|||||++.+... .+.||||+|.|||||++....+.
T Consensus 357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 999999988765543 234689999999999976432 24799999999999998543331
Q ss_pred ------CCChhhHHHHHHhCCC--CCCCCCCCC--CCHHHHHHHHHcCccCccCCCCHH
Q 008547 302 ------DKTEDGIFKEVLRNKP--DFRRKPWPS--ISNSAKDFVKKLLVKDPRARLTAA 350 (562)
Q Consensus 302 ------~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~ll~~~l~~dP~~Rps~~ 350 (562)
..+.+++...+...+. .++ ..|.. -...+++.+..||+.||+.|.|+.
T Consensus 437 e~evG~hPt~e~mq~~VV~kK~RP~~p-~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 437 EAEVGNHPTLEEMQELVVRKKQRPKIP-DAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hHHhcCCCCHHHHHHHHHhhccCCCCh-hhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 1122333444433321 111 11211 224578999999999999999984
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=245.73 Aligned_cols=213 Identities=25% Similarity=0.332 Sum_probs=177.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
...+..||+|++|.|-+.++..+|...|+|.+...-. .+....+++|+++..+-...|++|.+||.+...+.+||.||
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 3446679999999999999999999999999875532 45677889999998888789999999999999999999999
Q ss_pred ccCCCChHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 178 LCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 178 ~~~~g~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
.|.. +|..+.. -.+++.+++..+-+|+..++.||.|||++ .+||||+||+||||+ ..|+||+||||.+..+..
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---YDGQVKICDFGISGYLVD 201 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---cCCcEEEcccccceeehh
Confidence 9954 5544332 24678899999999999999999999975 899999999999999 589999999999987665
Q ss_pred CCCcccccCCCcccCchhccc-----CCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNK 316 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~ 316 (562)
+...+.-.|...|||||.+.. +|+-++||||||++++||.+++.||..- ++.+.+.++....
T Consensus 202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP 269 (282)
T ss_pred hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence 544444568889999998753 5678999999999999999999999653 5566666666543
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=321.33 Aligned_cols=239 Identities=20% Similarity=0.268 Sum_probs=182.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|...+.||+|+||.||+|.+..+|..||||++..... ....|+.+++++ +|||||+++++|.+....|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEE
Confidence 346667789999999999999989999999998864321 113468889999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||+++|+|.+++. .+++..+..++.||+.||.||| +.+|+||||||+||+++. ++..++. ||.+...
T Consensus 762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~---~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG---KDEPHLR-LSLPGLL 832 (968)
T ss_pred EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---CCceEEE-ecccccc
Confidence 99999999999883 4889999999999999999999 679999999999999983 4556654 6655433
Q ss_pred CCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHHHH---HhCC-------CCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEV---LRNK-------PDF 319 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~---~~~~-------~~~ 319 (562)
... ....+|+.|+|||++.+ .++.++|||||||++|||++|+.||..... .....-. .... +..
T Consensus 833 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (968)
T PLN00113 833 CTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI 909 (968)
T ss_pred ccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc
Confidence 211 23368899999998765 468899999999999999999999853211 1111110 0000 000
Q ss_pred CCCC--CCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~--~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.... .+....++.+++.+||..||++||++.++++
T Consensus 910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 0000 0011124678999999999999999999975
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=290.14 Aligned_cols=259 Identities=28% Similarity=0.461 Sum_probs=216.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...+|.++..+|.|+||.||+++++.+++..|+|+++.... ....-+..|+-+++..+ |||||.+++.+.....+|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~---dd~~~iqqei~~~~dc~-h~nivay~gsylr~dklw 88 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG---DDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLW 88 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCC---ccccccccceeeeecCC-CcChHHHHhhhhhhcCcE
Confidence 44579999999999999999999999999999999976543 24456778999999885 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+.||||.||+|.+.. .-.+++++.++.+.++..+.||.|||+.|=+|||||-.|||+. +.+.|||+|||.+..+.
T Consensus 89 icMEycgggslQdiy--~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQIT 163 (829)
T ss_pred EEEEecCCCccccee--eecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhh
Confidence 999999999998855 4568899999999999999999999999999999999999998 58899999999987654
Q ss_pred CC-CCcccccCCCcccCchhc----ccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCC
Q 008547 254 PG-KKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSI 327 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 327 (562)
.. .....+.|||.|||||+. .+++...+|||++|+...|+.--.+|-.+.-....+....+.....+. ..-...
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kw 243 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKW 243 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccc
Confidence 32 223467999999999974 567899999999999999998888887665554444444333322211 111235
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++.+.+|++.+|..+|++||+++.+|.|||....
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 7889999999999999999999999999998764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=278.99 Aligned_cols=200 Identities=35% Similarity=0.634 Sum_probs=174.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhH-----HHHHHHHHHHHHcc--CCCCcceEEEEEEcC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV-----EDVKREVKILQALA--GHENVVKFYNAFEDD 169 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----~~~~~E~~~l~~l~--~hp~iv~l~~~~~~~ 169 (562)
.|..++.+|.|+||.|++|.++.....|+||.|.++........ -.+-.||.||..|. .|+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 49999999999999999999999999999999987654322221 22456999999984 399999999999999
Q ss_pred CeEEEEEecc-CCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 NYVYIAMELC-EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~-~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
+++||+||-- +|-+|++++- ....+++..+..|++|++.|+++||+.||||||||-+||.++ .+|.+||+|||.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd---~~g~~klidfgs 716 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD---SNGFVKLIDFGS 716 (772)
T ss_pred CeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccCceecccccccEEEe---cCCeEEEeeccc
Confidence 9999999985 4668999884 346799999999999999999999999999999999999999 489999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD 302 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~ 302 (562)
|...+++ .+..++||..|.|||++.|.. +..-|||+||++||-++....||..
T Consensus 717 aa~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9877654 456789999999999998853 8889999999999999999999853
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=284.46 Aligned_cols=246 Identities=24% Similarity=0.326 Sum_probs=205.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
.+..++||+|+||+||+|.+--.|+ +||||++.... .+....+++.|+-+|.+| +|||+++|++++.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence 4557789999999999998865554 68999876543 344668899999999999 5999999999998776 88
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||++|+++|.|.+++..++ ..+-....+.|..||++|+.|||.++++||||-.+|||+. ...+|||.|||+|+...
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk---sP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK---SPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec---CCCeEEEEecchhhccC
Confidence 9999999999999997654 5788999999999999999999999999999999999998 47799999999999876
Q ss_pred CCCCc-cccc--CCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 254 PGKKF-QDIV--GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 254 ~~~~~-~~~~--gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
+.... .... -.+.|||=|.+. ..++.++|||||||++||++| |..|+.+....++-..+..+.. ... .|..+
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-Lsq--PpiCt 926 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQ--PPICT 926 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCC--CCCcc
Confidence 54432 2222 245688888765 567999999999999999998 9999999988877766665543 333 35688
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
-++.-+|.+||..|+..||+++++..
T Consensus 927 iDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 927 IDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHHHHhccCcccCccHHHHHH
Confidence 99999999999999999999988753
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=254.69 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=200.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEE-EEEcCCeE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNYV 172 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~-~~~~~~~~ 172 (562)
+.+.|.|.+.||+|.||.+-++.++.++..+|+|.+.+... ...+|.+|...--.|..|.||+..|+ .|+..+.+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 55689999999999999999999999999999999987653 67889999988878888999999887 57888899
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++++||++.|+|.+-+- ...+-+...+.++.|+++||.|+|++++||||||.+||||-.. +...|||||||++...
T Consensus 98 vF~qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKV 173 (378)
T ss_pred EEeeccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeeccccccc
Confidence 99999999999988762 3568899999999999999999999999999999999999754 4569999999998764
Q ss_pred CCCCCcccccCCCcccCchhcc----cC--CCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHH---HHHHhCCCCCCCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLK----RK--SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIF---KEVLRNKPDFRRK 322 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~----~~--~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~---~~~~~~~~~~~~~ 322 (562)
.. .......+..|.+||... +. ..+.+|||.||+++|.++||++||..... +.-+ .+.......-.+.
T Consensus 174 g~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~ 251 (378)
T KOG1345|consen 174 GT--TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK 251 (378)
T ss_pred Cc--eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence 32 222233466799999753 22 26778999999999999999999964322 2222 2233322222222
Q ss_pred CCCCCCHHHHHHHHHcCccCccCC---CCHHHHhcCccc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWV 358 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~R---ps~~~~l~hp~f 358 (562)
....+++.+..+.++-|..+|++| .++.......|.
T Consensus 252 ~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 252 KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 334578899999999999999999 455554444554
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=236.45 Aligned_cols=212 Identities=42% Similarity=0.739 Sum_probs=183.1
Q ss_pred eeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccCCCC
Q 008547 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (562)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~ 183 (562)
||.|++|.||++.+..+|+.+++|++....... ....+.+|+.+++.+. |++|+++++++......++++|++.+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999988889999999987654211 3567899999999995 9999999999999999999999999899
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-Cccccc
Q 008547 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIV 262 (562)
Q Consensus 184 L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-~~~~~~ 262 (562)
|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ..+.++|+|||.+....... ......
T Consensus 78 l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 78 LKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCceEEccCCcchhhccc
Confidence 998874332 46899999999999999999999999999999999999983 16789999999987654432 133456
Q ss_pred CCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCc
Q 008547 263 GSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340 (562)
Q Consensus 263 gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~ 340 (562)
++..|++||.+.. ..+.++|+|++|+++++| ..+.+++..|+.
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~ 199 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQ 199 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhh
Confidence 7889999999876 557889999999999999 568899999999
Q ss_pred cCccCCCCHHHHhcCc
Q 008547 341 KDPRARLTAAQALSHP 356 (562)
Q Consensus 341 ~dP~~Rps~~~~l~hp 356 (562)
.+|.+||++.++++|+
T Consensus 200 ~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 200 KDPEKRPSAKEILEHL 215 (215)
T ss_pred CCcccCcCHHHHhhCC
Confidence 9999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=235.39 Aligned_cols=212 Identities=41% Similarity=0.688 Sum_probs=177.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.+ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 56788999999999999999888999999998765432 2467888999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~- 256 (562)
++++++|.+.+..... .+++..+..++.+++.+|.+||+.+++|+||+|.||+++. ++.++|+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 78 YCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred ccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeeCceeeEecCccc
Confidence 9999999988754321 1889999999999999999999999999999999999984 5899999999988765442
Q ss_pred -CcccccCCCcccCchhcc-c-CCCCCcchHHHHHHHHHHHhCCCCCCC-CChh-hHHHHHHhCC
Q 008547 257 -KFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWD-KTED-GIFKEVLRNK 316 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~pf~~-~~~~-~~~~~~~~~~ 316 (562)
......++..|++||.+. . ..+.++||||||+++++|++|+.||.. .... .+.+.+..+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 334567888999999873 3 346789999999999999999999977 3433 5555555543
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=238.15 Aligned_cols=249 Identities=20% Similarity=0.250 Sum_probs=202.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE-cC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DD 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~-~~ 169 (562)
.|+++...+-+|.||.||.|.++.. .+.|.+|.+.... ++.....++.|...+..+. |||+..+.+++. +.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEeecc
Confidence 3678888899999999999977643 2346677775432 4556788899999999995 999999999876 45
Q ss_pred CeEEEEEeccCCCChHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 170 NYVYIAMELCEGGELLDRILAK------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
...++++.++.-|+|..++..- .-+.++..+...++.|++.|++|||++||||.||-..|.+|+ +...|||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId---d~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID---DQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh---hheeEEe
Confidence 6688889999999999988521 224577888899999999999999999999999999999999 5789999
Q ss_pred eeccCccccCCCCCcc---cccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCC
Q 008547 244 TDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
+|=.+++..-+..... .......||+||.+. ..++.++||||||++||||+| |+.|+..-+..++..-+..+..
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR- 516 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR- 516 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce-
Confidence 9999998876554322 112345799999875 567999999999999999998 9999988888877766665543
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
. ...-++|+++..++.-||...|++||+.+++.
T Consensus 517 l--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 517 L--AQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred e--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 2 22357899999999999999999999999875
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=287.13 Aligned_cols=198 Identities=21% Similarity=0.272 Sum_probs=145.7
Q ss_pred CCcceEEEEE-------EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 008547 157 ENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 229 (562)
Q Consensus 157 p~iv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N 229 (562)
+||+.++++| .....+++++|++ +++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~N 110 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSC 110 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchh
Confidence 5777777776 2334677888987 5699988843 23569999999999999999999999999999999999
Q ss_pred eEeccC----------------CCCCCeEEeeccCccccCCC-----------------CCcccccCCCcccCchhccc-
Q 008547 230 FLFKSA----------------KEDSSLKATDFGLSDFIKPG-----------------KKFQDIVGSAYYVAPEVLKR- 275 (562)
Q Consensus 230 Ill~~~----------------~~~~~vkl~DfG~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~- 275 (562)
|||+.. +.++.+||+|||+++..... ......+||++|+|||++.+
T Consensus 111 iLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~ 190 (793)
T PLN00181 111 FVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGS 190 (793)
T ss_pred EEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccC
Confidence 999631 23456788888887642110 00112468999999998765
Q ss_pred CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 276 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.++.++|||||||+||||++|.+|+.... .....+.... .+.. +....+....++.+||.++|.+||++.++|+|
T Consensus 191 ~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 191 SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV--LPPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh--cChh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 56899999999999999999998875322 1222222111 1111 11123557789999999999999999999999
Q ss_pred cccccc
Q 008547 356 PWVREG 361 (562)
Q Consensus 356 p~f~~~ 361 (562)
|||.+.
T Consensus 266 ~~~~~~ 271 (793)
T PLN00181 266 EFINEP 271 (793)
T ss_pred hhhhhh
Confidence 999874
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=230.25 Aligned_cols=254 Identities=23% Similarity=0.294 Sum_probs=195.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHcc---CCCCcceEEEEE-EcCCe
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALA---GHENVVKFYNAF-EDDNY 171 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---~hp~iv~l~~~~-~~~~~ 171 (562)
+|.+.+.||+|+||.||.|.+..++ ..+|+|......... ...+..|+.++..+. +-++++.+++.+ ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999987775 578888765542211 125778999999886 236999999999 58888
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC--CCCCeEEeeccCc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLS 249 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~--~~~~vkl~DfG~a 249 (562)
.||||+.+ |.+|.+.......+.++...+..++.|++.+|++||+.|++||||||+|++++... +...+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 78998877555567899999999999999999999999999999999999998532 1257999999999
Q ss_pred cccC---CCC-------C-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC
Q 008547 250 DFIK---PGK-------K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 250 ~~~~---~~~-------~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
+... ... . .....||..|+++.+..+. .+.+.|+||++.++.+++.|..||.+........++.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8322 111 1 1235599999999988765 48999999999999999999999976654333333333222
Q ss_pred CCCCC-CCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 318 DFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 318 ~~~~~-~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..... .....+.++..++..+-..+...+|....+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 22221 22335577888887777788888888776654
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=216.75 Aligned_cols=202 Identities=24% Similarity=0.448 Sum_probs=172.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|+|+++||.|+||+++.|.+..++++||||.-.... ..-++..|....+.|.+.+.|+..|.+...+.+-.||+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 6999999999999999999999999999999654332 23457789999999988999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--CCCCCeEEeeccCccccCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~--~~~~~vkl~DfG~a~~~~~ 254 (562)
|++ |-+|.+. ....+..++...++.++.||+.-++|+|++.+|+|||||+|+||+.. .+...|.|+|||+|+....
T Consensus 104 dLL-GPSLEDL-FD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 104 DLL-GPSLEDL-FDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhh-CcCHHHH-HHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 998 7787765 45677889999999999999999999999999999999999999853 2345689999999987644
Q ss_pred CC--------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 255 GK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 255 ~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
.. ......||.+||+=....+. .+.+-|+-|||.++++.+-|..||.+...
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 32 23457899999998766554 48889999999999999999999977543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-27 Score=209.21 Aligned_cols=248 Identities=20% Similarity=0.300 Sum_probs=197.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|+++++||+|+||.+|+|....+|..||||+-.... ..-++..|..+.+.|++-..|+.+..+..+..+-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 357999999999999999999999999999999654432 223467899999999888899999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||+++ |-+|.+.+ .-....++...++.++-|++.-++|+|.+++|||||||+|+|.+-......+.|+|||+|+....
T Consensus 89 VMdLL-GPsLEdLf-nfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLF-NFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeecc-CccHHHHH-HHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 99998 67877655 34557799999999999999999999999999999999999998655566799999999987543
Q ss_pred CC--------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh---hhHHHHHHhCCCCCC-C
Q 008547 255 GK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFR-R 321 (562)
Q Consensus 255 ~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~~~~~~~~~~-~ 321 (562)
.. .-....||.+|.+-....+. .+.+.|+-|+|.+|..+..|..||.+... ...+++|.......+ .
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence 32 22356899999998776553 47889999999999999999999987644 344555555443322 2
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCH
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTA 349 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~ 349 (562)
..+..+|.++.-.+.-|-..-=++-|..
T Consensus 247 ~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 247 VLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 2346678888888877765555555543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-28 Score=259.21 Aligned_cols=260 Identities=26% Similarity=0.413 Sum_probs=197.8
Q ss_pred cce-eecceeeccCCeEEEEEEEcCCCCEEEEEEecc---cccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y-~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+.| .-...+|.|++|.|+.+......+.++.|.... ...........+..|+-+-..|. |||++..+..+.+...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhccc
Confidence 445 456789999999998888777777677775542 11111222233667888888885 9999888777766666
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.+-+||||++ +|+..+... ..++...+-.++.|++.||.|+|..||.||||||+|+++. .++.+||+|||.+..
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASV 469 (601)
T ss_pred chhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCccee
Confidence 6666999999 999988433 5788999999999999999999999999999999999999 578999999999876
Q ss_pred cCCC-----CCcccccCCCcccCchhcccC-C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHH--HHHHhCC---CCC
Q 008547 252 IKPG-----KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF--KEVLRNK---PDF 319 (562)
Q Consensus 252 ~~~~-----~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~---~~~ 319 (562)
.... ......+|+..|+|||++.+. + ....||||.|++++.|++|+.||......+.. ....... ..-
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG 549 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence 5432 223567899999999998764 4 56789999999999999999999654433221 1110000 011
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+...|..++...+.+|.+||++||.+|.|+.+|++.+||+...
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 1123445788899999999999999999999999999999754
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=212.08 Aligned_cols=163 Identities=26% Similarity=0.337 Sum_probs=127.4
Q ss_pred CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccc
Q 008547 182 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261 (562)
Q Consensus 182 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~ 261 (562)
|+|.+.+.. ....+++..++.++.||+.||.|||+.+ ||+|||++ .++.+|+ ||++....... .
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~ 64 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----S 64 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----C
Confidence 688887753 2456999999999999999999999999 99999998 5788898 99987654322 2
Q ss_pred cCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHHHhCCCCCCCC---CCCCCCH--HHHHH
Q 008547 262 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRK---PWPSISN--SAKDF 334 (562)
Q Consensus 262 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~l 334 (562)
.||+.|+|||++.+ .++.++|||||||++|||++|+.||..... ...+..+.......... ....++. ++.++
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF 144 (176)
T ss_pred CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence 68999999999865 468899999999999999999999976543 23333443332221111 1112333 69999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
|.+||..+|.+||++.+++.|+|+..
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=218.62 Aligned_cols=258 Identities=36% Similarity=0.577 Sum_probs=206.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCC-CcceEEEEEEcCCeEEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp-~iv~l~~~~~~~~~~~lv~ 176 (562)
|.+.+.||.|+||.||.+.+. ..+++|.+.............+.+|+.++..+. |+ +|+.+++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 678889999999999999876 789999987765544345788999999999996 66 8999999998888899999
Q ss_pred eccCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC-CeEEeeccCccccCC
Q 008547 177 ELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFIKP 254 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~-~vkl~DfG~a~~~~~ 254 (562)
+++.++++...+..... ..++...+..++.|++.++.|+|+.+++|||+||+||+++. .. .++++|||.+.....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~---~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR---DGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC---CCCeEEEeccCcceecCC
Confidence 99999999855532211 26899999999999999999999999999999999999984 44 799999999875543
Q ss_pred CC-------CcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCCh----hhHHHHHHhCCCC-
Q 008547 255 GK-------KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPD- 318 (562)
Q Consensus 255 ~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~- 318 (562)
.. .....+||..|+|||.+.+ ......|+||+|++++++++|..||..... ......+......
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 32 2456789999999998875 457889999999999999999999876653 3444444433322
Q ss_pred CCCCCCCCC----CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 319 FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 319 ~~~~~~~~~----~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
......+.. ...+.+++.+++..+|..|.+..+...++|.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 121111111 25789999999999999999999999887766543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=226.69 Aligned_cols=174 Identities=20% Similarity=0.284 Sum_probs=133.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-CCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHccCCCCcce-EEEEEEcC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVK-FYNAFEDD 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~-l~~~~~~~ 169 (562)
+...|.+.+.||+|+||+||+|.+.. +++.||||++..... ......+.+.+|+.+|+.|. |+||+. ++++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~---- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT---- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc----
Confidence 45679999999999999999998876 678889998753311 12334667999999999995 999885 5432
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC-CCCceEeccCCCCCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDl-kp~NIll~~~~~~~~vkl~DfG~ 248 (562)
+..|+||||++|++|.. + .. .. ...++.|++.||.|||++||+|||| ||+|||++ .++.+||+|||+
T Consensus 91 ~~~~LVmE~~~G~~L~~-~--~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGl 158 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-A--RP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQL 158 (365)
T ss_pred CCcEEEEEccCCCCHHH-h--Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECcc
Confidence 45899999999999852 2 11 11 1467899999999999999999999 99999997 467899999999
Q ss_pred ccccCCCC---------CcccccCCCcccCchhcccCC-------CCCcchH
Q 008547 249 SDFIKPGK---------KFQDIVGSAYYVAPEVLKRKS-------GPESDVW 284 (562)
Q Consensus 249 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~-------~~~~Diw 284 (562)
|+...... ...+..+++.|+|||.+.... +..+|-|
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 98654322 123567888999999985422 3446766
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-27 Score=239.19 Aligned_cols=241 Identities=28% Similarity=0.478 Sum_probs=203.5
Q ss_pred eeccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 104 LGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 104 lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
+|.|+||.|+++.. ...|..+|+|+..+......... ....|..++...++||.+|.+...++.++..++++++..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 79999999998742 23467799998876554333222 556788888888789999999999999999999999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCccc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~ 260 (562)
||+|+..+ .....+.+.....+...++.+++.+|..+|+|||+|++||+++ .+|++++.|||+++..-..+..
T Consensus 81 gg~lft~l--~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 81 GGDLFTRL--SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred cchhhhcc--ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccCCchhhhHhHhhhhc--
Confidence 99998877 4456688888999999999999999999999999999999999 5899999999999875433332
Q ss_pred ccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCc
Q 008547 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340 (562)
Q Consensus 261 ~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~ 340 (562)
|||..|||||+++ +....+|+||||+++++|++|..||.. ++...|++..+..+. .++..+++++..++.
T Consensus 154 -cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~ 223 (612)
T KOG0603|consen 154 -CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFK 223 (612)
T ss_pred -ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHh
Confidence 9999999999998 557899999999999999999999977 677777776665554 466889999999999
Q ss_pred cCccCCCC-----HHHHhcCccccccC
Q 008547 341 KDPRARLT-----AAQALSHPWVREGG 362 (562)
Q Consensus 341 ~dP~~Rps-----~~~~l~hp~f~~~~ 362 (562)
.+|..|.. +.++++|+||+...
T Consensus 224 r~p~nrLg~~~~~~~eik~h~f~~~i~ 250 (612)
T KOG0603|consen 224 RNPENRLGAGPDGVDEIKQHEFFQSID 250 (612)
T ss_pred hCHHHHhccCcchhHHHhccchheeee
Confidence 99999985 47899999998753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=231.14 Aligned_cols=221 Identities=30% Similarity=0.515 Sum_probs=174.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|..+++|..|+||.||.++|+.+.+.+|+| +.+.... .+- ++... +.|++|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li--------lRn--ilt~a-~npfvv-------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI--------LRN--ILTFA-GNPFVV-------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh--------hhc--ccccc-CCccee--------------
Confidence 357899999999999999999999999999994 5544321 111 23222 455555
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|+=...+ +..+.++... +.+++|||+-||+|||+||+|.+|.. -|++|++|||+++..-.
T Consensus 136 -------gDc~tll--k~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~---mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 -------GDCATLL--KNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITS---MGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred -------chhhhhc--ccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeee---cccccccchhhhhhhhh
Confidence 2222222 2224454433 78999999999999999999999994 78999999999865321
Q ss_pred CCC----------------cccccCCCcccCchhc-ccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC
Q 008547 255 GKK----------------FQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 255 ~~~----------------~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
... ....||||.|+|||++ ..+|+..+|||++|+|+|+.+.|+.||.+.+.++++..++....
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i 275 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI 275 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc
Confidence 110 1236999999999986 55789999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCC---CHHHHhcCccccccC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREGG 362 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rp---s~~~~l~hp~f~~~~ 362 (562)
.++...+ .++++++++|.++|..+|..|. .+-++.+|+||+...
T Consensus 276 ~wpE~de-a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 276 EWPEEDE-ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred cccccCc-CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 8887744 5889999999999999999997 677888999999764
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=188.18 Aligned_cols=189 Identities=18% Similarity=0.269 Sum_probs=143.9
Q ss_pred eecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-hhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
.+...|++|+||+||.+. ..+..++.+.+........ .....+.+|+++|++|.+|++|++++++ +..+++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~--~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVR--GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEee--cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 456789999999999885 3677888887765544322 2233578999999999767999999986 34699999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC-CCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDl-kp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
|+.|.+|...+. . ....++.|++.+|.++|++||+|||| ||+|||++ .++.++|+|||+|.......
T Consensus 79 yI~G~~L~~~~~--------~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 79 YLAGAAMYQRPP--------R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eecCccHHhhhh--------h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcc
Confidence 999988864331 1 12357889999999999999999999 79999998 46789999999998654333
Q ss_pred Cc--------------ccccCCCcccCchhcc--cCCC-CCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 257 KF--------------QDIVGSAYYVAPEVLK--RKSG-PESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 257 ~~--------------~~~~gt~~y~aPE~~~--~~~~-~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
.. .-...++.|++|+... ...+ ...++++.|+-+|.++|++.|+++..+
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 10 0123678888888532 2333 567888999999999999999987654
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-23 Score=177.85 Aligned_cols=141 Identities=30% Similarity=0.518 Sum_probs=128.5
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
....++++++++|+++|..+|+|++|.|+..||..+|. .+|..+++.++..|++.+|. +.+.|+|.+|+.++......
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr-~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILR-SLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHH-HcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence 45678999999999999999999999999999999994 79999999999999999999 89999999999988766543
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCC------HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
... .++++.+|+.||+|++|+|+..||+.+++..|+ ++++++.+|.|+||.|+|+||++++..
T Consensus 88 ~~~-----~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 88 GDK-----EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred CCc-----HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 221 368999999999999999999999999999883 999999999999999999999998875
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=190.13 Aligned_cols=142 Identities=20% Similarity=0.215 Sum_probs=109.3
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------------------hHHHHHHHHHHHHHccCCC
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------------------AVEDVKREVKILQALAGHE 157 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~~hp 157 (562)
...||+|+||.||+|.+. +|+.||||++......... ......+|+.++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 467999999999999986 8999999998654221100 0123346999999995 77
Q ss_pred CcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHcCceeccCCCCceEeccCC
Q 008547 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 158 ~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~iiHrDlkp~NIll~~~~ 236 (562)
++.....+.... .+|||||++|+++..... ....++...+..++.||+.+|.++ |+.||+||||||+|||++
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~--- 152 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH--- 152 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE---
Confidence 764433322222 389999999877655432 235789999999999999999999 799999999999999997
Q ss_pred CCCCeEEeeccCcccc
Q 008547 237 EDSSLKATDFGLSDFI 252 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~ 252 (562)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 367999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=197.96 Aligned_cols=200 Identities=25% Similarity=0.401 Sum_probs=147.0
Q ss_pred cCCCCcceEEEEEEc---------------------------CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHH
Q 008547 154 AGHENVVKFYNAFED---------------------------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206 (562)
Q Consensus 154 ~~hp~iv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~ 206 (562)
..|||||.+..+|.+ +..+|+||..++. +|..++.. ...+....+.++.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~la 348 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILA 348 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc---CCCchHHHHHHHH
Confidence 369999999887753 2368999999864 88888843 3467888899999
Q ss_pred HHHHHHHHHHHcCceeccCCCCceEeccC-CCCCCeEEeeccCccccCC-------CCCcccccCCCcccCchhcccCC-
Q 008547 207 QMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRKS- 277 (562)
Q Consensus 207 qi~~~l~~lH~~~iiHrDlkp~NIll~~~-~~~~~vkl~DfG~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~- 277 (562)
|+++|+.|||.+||.|||||.+||||.-+ ++-..++|+|||++---+. ....-+..|....||||+.....
T Consensus 349 QlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 349 QLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 99999999999999999999999999753 2334688999998742211 11223456788899999986433
Q ss_pred ------CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHH-HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCH-
Q 008547 278 ------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA- 349 (562)
Q Consensus 278 ------~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~- 349 (562)
..++|.|+.|.+.||+++...||.+..+..+-.. ..... . +.....+|+.+++++..+|+.||++|+++
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q--L-Palp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ--L-PALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh--C-CCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 4578999999999999999999988544321111 11111 1 11123578899999999999999999985
Q ss_pred --HHHhcCccccc
Q 008547 350 --AQALSHPWVRE 360 (562)
Q Consensus 350 --~~~l~hp~f~~ 360 (562)
..+|+--.+..
T Consensus 506 iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 506 IAANVLNLSLWRM 518 (598)
T ss_pred HHHhHHHHHHhcC
Confidence 45555444443
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-23 Score=191.88 Aligned_cols=175 Identities=15% Similarity=0.128 Sum_probs=132.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHH------HHHHHHHHHHccCCCCcceEEEEE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED------VKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~------~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
-+..+|++.++||.|+||.||++.. ++..+|||++.......+..... +.+|+..+.++ .||+|+.+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEee
Confidence 3567999999999999999999754 46789999987654433333333 67999999999 599999998886
Q ss_pred EcC--------CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC
Q 008547 167 EDD--------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238 (562)
Q Consensus 167 ~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~ 238 (562)
... +..+|||||++|.+|.+.. .+++ ....+++.+|..||+.|++|||+||+||++++ +
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~---~ 171 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSK---N 171 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeC---C
Confidence 633 3589999999999987653 2333 34669999999999999999999999999983 4
Q ss_pred CCeEEeeccCccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHH
Q 008547 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL 294 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~ 294 (562)
+ ++|+|||.+........... | ++...+..++|+||||+++..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~d~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAKDR------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhHHH------H----HHHhHhcccccccceeEeehHHH
Confidence 5 99999998764421111100 0 12234567899999999887654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=197.51 Aligned_cols=236 Identities=23% Similarity=0.363 Sum_probs=151.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccC---------CCCcceEEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG---------HENVVKFYNAFE 167 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~---------hp~iv~l~~~~~ 167 (562)
....+..||.|+++.||.+++..||+.+|+|+............+.+.+|.-....+.+ |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 56778899999999999999999999999998765554444466777777655444321 222333333222
Q ss_pred ------------cCCe-----EEEEEeccCCCChHHHHH---hhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 008547 168 ------------DDNY-----VYIAMELCEGGELLDRIL---AKKDS--RYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 225 (562)
Q Consensus 168 ------------~~~~-----~~lv~e~~~~g~L~~~l~---~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDl 225 (562)
..+. .+++|+-+ .++|...+. ..... .+.......+..|++..+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1122 36778877 458766542 22211 1222233445589999999999999999999
Q ss_pred CCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc---------CCCCCcchHHHHHHHHHHHhC
Q 008547 226 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCG 296 (562)
Q Consensus 226 kp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwslG~il~el~~g 296 (562)
+|+|++++ .+|.++|+||+....... .......+..|.|||.... .++.+.|.|+||+++|.|.+|
T Consensus 172 ~~~nfll~---~~G~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLD---QDGGVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEc---CCCCEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999 589999999987654332 2222345678999997633 236778999999999999999
Q ss_pred CCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCC
Q 008547 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 346 (562)
Q Consensus 297 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R 346 (562)
+.||........... ....+.++|+.++.||..+|++||.+|
T Consensus 247 ~lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999965543221111 112234789999999999999999988
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=181.38 Aligned_cols=144 Identities=19% Similarity=0.222 Sum_probs=111.8
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-----------------------hhhHHHHHHHHHHHHHccCC
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----------------------PIAVEDVKREVKILQALAGH 156 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~l~~h 156 (562)
+.+.||+|+||.||+|.+. +|+.||||++....... ......+..|...+.++. |
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~ 78 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-E 78 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-h
Confidence 3568999999999999976 89999999987542110 001233468999999995 8
Q ss_pred CCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccC
Q 008547 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSA 235 (562)
Q Consensus 157 p~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~ 235 (562)
++|.....+.... .||||||++|+++...... ...++...+..++.|++.+|.++|. .||+||||||+|||++
T Consensus 79 ~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-- 152 (190)
T cd05145 79 AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-- 152 (190)
T ss_pred CCCCCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE--
Confidence 8875544433332 4899999998865443322 2467889999999999999999999 9999999999999997
Q ss_pred CCCCCeEEeeccCccccC
Q 008547 236 KEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 236 ~~~~~vkl~DfG~a~~~~ 253 (562)
++.++|+|||+|....
T Consensus 153 --~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 --DGKPYIIDVSQAVELD 168 (190)
T ss_pred --CCCEEEEEcccceecC
Confidence 4789999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-22 Score=175.24 Aligned_cols=143 Identities=29% Similarity=0.541 Sum_probs=126.3
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++.++..++.++|..||++++|+|+..||..++ +.+|..+++.++..++..+|.+++|.|+|+||+.++..........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~l-r~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVL-RSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 456788999999999999999999999999999 5599999999999999999999999999999998877654433322
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
. ....+++++|+.||+||+|+|+++||+.+|...+ +++.+++.+|.|+||.|+|+||+++|...
T Consensus 81 ~-~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 81 E-ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred c-ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 1 1135899999999999999999999999999888 38999999999999999999999999753
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-22 Score=183.32 Aligned_cols=241 Identities=17% Similarity=0.206 Sum_probs=187.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
..+.-+|.....|+.|+|++. |..+++|++..... .+...+.|..|.-.|+-+. ||||+.+++.|....++.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~-t~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREV-TARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhc-chhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 345567888999999999754 56678888765443 2334567888999998885 9999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC-ce-eccCCCCceEeccCCCCCCeEE--eeccCccccC
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LV-HRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIK 253 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ii-HrDlkp~NIll~~~~~~~~vkl--~DfG~a~~~~ 253 (562)
||+.|+|++.+....+--....++.+++.+|+.|+.|||+.. +| ---|....|+|+ ++.+.+| +|--++-. .
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edltarismad~kfsfq-e 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLTARISMADTKFSFQ-E 343 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhhhheecccceeeee-c
Confidence 999999999997666666778899999999999999999864 33 336888899998 4555554 33222211 1
Q ss_pred CCCCcccccCCCcccCchhcccCC----CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
....-.|.||+||.+.... -.++|+|||++++|||.|...||.+-+..+.-.++..... +....|.++.
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl--rv~ippgis~ 416 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL--RVHIPPGISR 416 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc--cccCCCCccH
Confidence 1224468999999986543 4568999999999999999999988887776656544433 3333478999
Q ss_pred HHHHHHHHcCccCccCCCCHHHHh
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
.+..|+.-|+..||.+||....++
T Consensus 417 hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceeh
Confidence 999999999999999999887654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=176.37 Aligned_cols=138 Identities=21% Similarity=0.314 Sum_probs=108.1
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc----CCCCcceEEEEEEcCC---eEE
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----GHENVVKFYNAFEDDN---YVY 173 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~l~~~~~~~~---~~~ 173 (562)
.+.||+|+||.||. ++.++.. +||++..... ...+.+.+|+.+++.|. +||||+++++++.++. .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 45799999999995 6777766 6998865432 24467899999999994 3799999999998763 434
Q ss_pred -EEEec--cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccC
Q 008547 174 -IAMEL--CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL 248 (562)
Q Consensus 174 -lv~e~--~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l-~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~ 248 (562)
+|+|| +.+|+|.+++.. ..+++. ..++.+++.++ +|||+++|+||||||+|||++..+ .+..++|+||+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 78999 557999999843 245555 46688888887 999999999999999999998532 345899999443
Q ss_pred c
Q 008547 249 S 249 (562)
Q Consensus 249 a 249 (562)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.5e-21 Score=206.27 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=159.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|.|.+.||.|+||+||+|.+.. |+.||+|+-.....+.--...+++.-+. ++. -+-|..+...+.-.+.-++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~---~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQM---LPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hhh---hcchHHHHHHHccCCccee
Confidence 3579999999999999999999766 9999999876655444333333333333 221 2556666666666777889
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC----CCCCCeEEeeccCcc
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----KEDSSLKATDFGLSD 250 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~----~~~~~vkl~DfG~a~ 250 (562)
|+||.+.|+|++++ +..+.+++..+..+..|||..|+.||..+|||+||||+|+||... .+..-++|+|||.|-
T Consensus 772 v~ey~~~Gtlld~~--N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLI--NTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeccccccHHHhh--ccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 99999999999988 466789999999999999999999999999999999999999642 235579999999986
Q ss_pred cc---CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCC
Q 008547 251 FI---KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR 298 (562)
Q Consensus 251 ~~---~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~ 298 (562)
.+ ..+..+...++|-.+-.+|+..|. ++..+|.|.|+.+++.|+.|+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 53 445567778899999999999875 5999999999999999999864
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-21 Score=206.88 Aligned_cols=239 Identities=24% Similarity=0.319 Sum_probs=169.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccc-cCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK-MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.|...+.||++.|=+|.+|++. .| .|+||++-+.. ...-....+...|++ .... .+||++++.-+.......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 5778899999999999999754 34 49999886543 222122233344555 2333 699999998887788888999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC--
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-- 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-- 253 (562)
=+|+.. +|++.+ ....-+..-+.+.|+.||+.||.-+|..||+|+|||.+||||.+ -.=+.|+||..-+..-
T Consensus 100 Rqyvkh-nLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRL--STRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHHHhh-hhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---echhhhhcccccCCccCC
Confidence 999854 899888 33345777788889999999999999999999999999999996 2237789997654321
Q ss_pred --CCCCcc----cccCCCcccCchhcccC------------CCCCcchHHHHHHHHHHHh-CCCCCCC-------CChhh
Q 008547 254 --PGKKFQ----DIVGSAYYVAPEVLKRK------------SGPESDVWSIGVITYILLC-GRRPFWD-------KTEDG 307 (562)
Q Consensus 254 --~~~~~~----~~~gt~~y~aPE~~~~~------------~~~~~DiwslG~il~el~~-g~~pf~~-------~~~~~ 307 (562)
+...+. +...-.+|.|||.+... -+++.||||+||+++||++ |++||.- .....
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~ 253 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNAD 253 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCcc
Confidence 111111 11223469999987321 2567899999999999998 7888821 00011
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..+.++.... +..++.+|..|++.||.+|.+|++.|+.
T Consensus 254 ~~e~~Le~Ie----------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 254 DPEQLLEKIE----------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CHHHHHHhCc----------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1222222211 2358899999999999999999999864
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-19 Score=171.89 Aligned_cols=146 Identities=24% Similarity=0.233 Sum_probs=112.9
Q ss_pred ceeecceeeccCCeEEEEEE-EcCCCCEEEEEEecccccCc-------------------h--hhHHHHHHHHHHHHHcc
Q 008547 97 RYTIGKLLGHGQFGYTYVAT-DKANGDRVAVKKIEKNKMIL-------------------P--IAVEDVKREVKILQALA 154 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~-------------------~--~~~~~~~~E~~~l~~l~ 154 (562)
-|.+.+.||+|+||.||+|. +..+|+.||||++....... + .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 67899999999986542110 0 01234678999999995
Q ss_pred CC--CCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCceE
Q 008547 155 GH--ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFL 231 (562)
Q Consensus 155 ~h--p~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~NIl 231 (562)
+ ..++.++++ ...++||||++|++|..... ....+....+..++.||+.+|.+||+.| |+||||||+||+
T Consensus 109 -~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 109 -EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred -hcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 4 334455543 23589999999988765442 2245666778899999999999999999 999999999999
Q ss_pred eccCCCCCCeEEeeccCccccC
Q 008547 232 FKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 232 l~~~~~~~~vkl~DfG~a~~~~ 253 (562)
++ ++.++|+|||.|....
T Consensus 182 i~----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH----DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE----CCCEEEEEChhhhccC
Confidence 97 4679999999987543
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-19 Score=147.46 Aligned_cols=140 Identities=27% Similarity=0.476 Sum_probs=127.0
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..+.+++.++++..|..||.+++|+|+..||..++ +++|+.+...++.+++..+|.++.|.|+|++|...+.......+
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAm-ralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d 103 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAM-RALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD 103 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHH-HHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence 45678889999999999999999999999999998 56999999999999999999999999999999988775544333
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCC------HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+++..+|+.||.|++|.|+..+|+.+...+++ +++|++++|.|+||-|+-+||..+|+.
T Consensus 104 -----t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 104 -----TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred -----cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 1468999999999999999999999999998884 899999999999999999999999985
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-20 Score=199.97 Aligned_cols=261 Identities=27% Similarity=0.465 Sum_probs=208.7
Q ss_pred cceeecceeeccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..|.+.+.||+|+|+.|-...... +...+|.|.+.... ........+..|..+-..+.+|+|++.+++........++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 368888999999999998886533 33456667664432 2223445566788888888669999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCceEeccCCCCC-CeEEeeccCcccc
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFI 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~iiHrDlkp~NIll~~~~~~~-~vkl~DfG~a~~~ 252 (562)
+++|..|++++..+........+...+..++.|+..++.|+| ..++.|||+||+|.+++. .+ .++++|||+|...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCcccCCCchhhccc
Confidence 999999999988663222226778889999999999999999 999999999999999984 55 8999999999766
Q ss_pred CC-CC---CcccccC-CCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh-HHHHHHhCCCCCCCCCC
Q 008547 253 KP-GK---KFQDIVG-SAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 253 ~~-~~---~~~~~~g-t~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 324 (562)
.. .. .....+| ++.|+|||...+ ...+..|+||+|+++.-+++|..|+....... .+.........+...+|
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcc
Confidence 44 22 2345688 999999999876 34788999999999999999999986554332 23333333334456778
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
..++....+++.+++..+|..|.+..++..+||+..
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccCChhhhhcccccccCCchhccccccccccccccc
Confidence 899999999999999999999999999999999988
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=178.33 Aligned_cols=199 Identities=26% Similarity=0.346 Sum_probs=156.1
Q ss_pred HHccCCCCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCCCCc
Q 008547 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL-VHRDMKPEN 229 (562)
Q Consensus 151 ~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-iHrDlkp~N 229 (562)
+.+ .|.|+.+++|.+.++...++|.+||.-|+|.+.+.. ....+++.-...++++|+.||.|||...| .|+.|++.|
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 456 499999999999999999999999999999998854 45678888899999999999999998877 999999999
Q ss_pred eEeccCCCCCCeEEeeccCccccCCC---CCcccccCCCcccCchhcccC--------CCCCcchHHHHHHHHHHHhCCC
Q 008547 230 FLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK--------SGPESDVWSIGVITYILLCGRR 298 (562)
Q Consensus 230 Ill~~~~~~~~vkl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~DiwslG~il~el~~g~~ 298 (562)
.+++ ....+||+|||+....... .......-..-|.|||.+.+. .+.+.||||+|++++|+++...
T Consensus 80 Clvd---~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 80 CLVD---SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ceee---eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999 5899999999998765321 111112234569999998653 3667999999999999999999
Q ss_pred CCCCCC----hhhHHHHHHh-CCCCCCCCCC--CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 299 PFWDKT----EDGIFKEVLR-NKPDFRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 299 pf~~~~----~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
||.... ..++...+.. +...+.+..+ ..+++++..++..||..+|..||++.++-.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 996532 2345555555 2222332222 145667999999999999999999988754
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-18 Score=160.43 Aligned_cols=137 Identities=26% Similarity=0.365 Sum_probs=112.2
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
+.||+|++|.||+|.+ .|..|++|+........+ .....+.+|+.++..+. |++|+....++.+.+..++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999975 678899997654332211 12346788999999995 888887777777777889999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
||++|++|.+.+... .. ....++.+++.+|.++|+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 999999998877322 12 7889999999999999999999999999999997 46799999998865
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-18 Score=157.50 Aligned_cols=139 Identities=24% Similarity=0.313 Sum_probs=107.0
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-------------------hhhHHHHHHHHHHHHHccCCC-
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-------------------PIAVEDVKREVKILQALAGHE- 157 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------------------~~~~~~~~~E~~~l~~l~~hp- 157 (562)
|.+.+.||.|+||.||+|.+. +|+.||||++....... .........|+.++..+. |+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 778899999999999999864 79999999876432100 011223678999999985 66
Q ss_pred -CcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 158 -NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 158 -~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
.++..++ ....++||||++|++|..... ......++.+|+.++.++|+.||+||||||+||+++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~--- 159 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD--- 159 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---
Confidence 4444444 234589999999998865431 134567899999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccC
Q 008547 237 EDSSLKATDFGLSDFIK 253 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~ 253 (562)
+++.++|+|||++....
T Consensus 160 ~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 160 DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcEEEEECCccccCC
Confidence 47899999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=179.36 Aligned_cols=144 Identities=23% Similarity=0.296 Sum_probs=113.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
......|...+.||+|+||.||+|.+.. ..+++|+....... .....+.+.+|+.+++.+. |++|+....++
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~ 405 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYD 405 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEE
Confidence 3344456778899999999999997543 34555543221111 1123456889999999995 99998887777
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
......++||||++|++|.+.+. ....++.+++.+|.+||+.||+||||||+|||++ ++.++|+||
T Consensus 406 ~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDF 471 (535)
T PRK09605 406 VDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDF 471 (535)
T ss_pred EeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeC
Confidence 77777899999999999988773 3567899999999999999999999999999994 568999999
Q ss_pred cCcccc
Q 008547 247 GLSDFI 252 (562)
Q Consensus 247 G~a~~~ 252 (562)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 999753
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=155.46 Aligned_cols=133 Identities=25% Similarity=0.342 Sum_probs=104.9
Q ss_pred eeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-----hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
.||+|+||.||+|. .+|..|++|......... ......+.+|+.++..+. |+++.....++...+..++|||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 48999999999997 567889999865432211 112366788999999995 7766554445556666789999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
|++|++|.+.+.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus 78 ~~~g~~l~~~~~~~~------~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN------D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH------H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcC
Confidence 999999988763211 0 7899999999999999999999999999997 57899999999865
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.4e-19 Score=176.07 Aligned_cols=177 Identities=24% Similarity=0.417 Sum_probs=133.6
Q ss_pred CeEEEEEeccCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.++||.|++|...+|.+.+... .....+...++.++.|++.|++| +|.+|||+||.||+.. .+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 3689999999999999998633 33456788899999999999999 9999999999999997 466899999999
Q ss_pred ccccCCCC-------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCC
Q 008547 249 SDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 249 a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
........ ..+..+||.+||+||.+.+ .++.++||||||+||+|++. =..+|.. ...+..+..+. +
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~r~g~--i 477 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---IATLTDIRDGI--I 477 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhhhcCC--C
Confidence 87654433 4556789999999999885 67999999999999999997 2222211 11222222221 1
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
++..+.+. +.-..|+..||...|.+||++.+.--|+|.
T Consensus 478 p~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 478 PPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred ChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 21122222 335689999999999999987777667764
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=149.89 Aligned_cols=141 Identities=27% Similarity=0.472 Sum_probs=122.8
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
..+++++++.++.++|..+|.+++|.|+..||..++.. +|..++...+..++..+|.+++|.|+|+||+..+.......
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 86 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRS-LGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGER 86 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCC
Confidence 34678899999999999999999999999999999954 78888889999999999999999999999998765432111
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ....++.+|+.+|.|++|+|+.+||..++...+ ++..+|..+|.|++|.|+|+||..+|++
T Consensus 87 --~---~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 87 --D---PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred --C---cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 1 124688899999999999999999999997655 4888999999999999999999999986
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=148.44 Aligned_cols=140 Identities=29% Similarity=0.549 Sum_probs=121.1
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
+..++++++.++++.|..+|.+++|.|+.+||..++.. ++..+..+.+..+++.+|.+++|.|+|+||+..+.......
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 45578889999999999999999999999999999954 78888889999999999999999999999998766432211
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
. ....+..+|+.||.|++|+|+.+||..++...+ ++..+|..+|.+++|.|+|+||+.+|.
T Consensus 81 ~-----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 81 D-----SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred c-----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 1 124678899999999999999999999987654 488899999999999999999999886
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=150.82 Aligned_cols=141 Identities=25% Similarity=0.276 Sum_probs=100.0
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHH---------------------HHHHHHHHHHHccCC-CC
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------------------DVKREVKILQALAGH-EN 158 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-p~ 158 (562)
.+.||+|+||.||+|.+. +|+.||||++............ ....|...+..+..+ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999876 7999999988654321111111 114577777776422 23
Q ss_pred cceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCC
Q 008547 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 159 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~ 237 (562)
+++.++. ...++||||++++.+........ .. ...+..++.+++.++.++|. .||+||||||+||+++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~--~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~---- 149 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV--RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD---- 149 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhh--hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----
Confidence 4555543 23589999999865432211111 01 16688999999999999999 9999999999999997
Q ss_pred CCCeEEeeccCccccC
Q 008547 238 DSSLKATDFGLSDFIK 253 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~ 253 (562)
++.++|+|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 5789999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=132.64 Aligned_cols=138 Identities=22% Similarity=0.385 Sum_probs=123.0
Q ss_pred hhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 393 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 393 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
.....|++.++++++++|..+|.|+||.|+++||+..|.. +|...++++++.|++. ..|.|+|.-|+.++-....
T Consensus 21 nvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aS-lGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~ 95 (171)
T KOG0031|consen 21 NVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLAS-LGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLN 95 (171)
T ss_pred hHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHH-cCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhc
Confidence 3445688999999999999999999999999999999954 9999999999999997 6789999999988775544
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
..++ ++.+..+|+.||.+++|.|..+.|+++|...+ +|+.+++.+-.|..|.++|.+|+.++.
T Consensus 96 gtdp-----e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 96 GTDP-----EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred CCCH-----HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 3332 35788899999999999999999999999888 499999999999999999999999998
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=143.58 Aligned_cols=137 Identities=28% Similarity=0.450 Sum_probs=116.6
Q ss_pred cccchHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcc-cchhhHHHHHhhhhhh
Q 008547 396 STLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAATLHVHQL 473 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~ef~~~~~~~~~~ 473 (562)
+.++..++..|..+|.++|.+ ++|+++.+||..+.. ...+.....++..++.+++|. |+|++|+..+......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~-----~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~ 99 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE-----LALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK 99 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH-----HhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC
Confidence 448899999999999999999 999999999998772 233456778999999988888 9999999988776543
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
... ..+++.+|+.||.+++|+|+.+||..++..+. .++.+|.++|.|+||+|+|+||++.+.
T Consensus 100 ~~~-----~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 100 ASK-----REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred ccH-----HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 321 25899999999999999999999999886442 178899999999999999999999998
Q ss_pred hc
Q 008547 541 TA 542 (562)
Q Consensus 541 ~~ 542 (562)
+.
T Consensus 175 ~~ 176 (187)
T KOG0034|consen 175 KQ 176 (187)
T ss_pred cC
Confidence 75
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=145.71 Aligned_cols=139 Identities=17% Similarity=0.251 Sum_probs=102.6
Q ss_pred cceee-ccCCeEEEEEEEcCCCCEEEEEEeccccc----------CchhhHHHHHHHHHHHHHccCCCCc--ceEEEEEE
Q 008547 101 GKLLG-HGQFGYTYVATDKANGDRVAVKKIEKNKM----------ILPIAVEDVKREVKILQALAGHENV--VKFYNAFE 167 (562)
Q Consensus 101 ~~~lG-~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~~hp~i--v~l~~~~~ 167 (562)
...|| .||.|+||.+.. .+..+|||.+..... ........+.+|+.++..|. |++| +..+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeee
Confidence 34677 888999999864 377899998754221 11123456789999999995 7775 66776644
Q ss_pred cC-C---eEEEEEeccCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 168 DD-N---YVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 168 ~~-~---~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
.. . ..++|||+++| .+|.+.+.. ..+++. .+.+|+.+|.+||++||+||||||.|||++. ++.++
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~---~~~v~ 182 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP---DGKFW 182 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC---CCCEE
Confidence 32 2 23599999997 577776632 345554 3678999999999999999999999999984 56899
Q ss_pred EeeccCcccc
Q 008547 243 ATDFGLSDFI 252 (562)
Q Consensus 243 l~DfG~a~~~ 252 (562)
|+|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999988753
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=133.77 Aligned_cols=133 Identities=29% Similarity=0.355 Sum_probs=110.4
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCC-CCcceEEEEEEcCCeEEEEEec
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~l~~~~~~~~~~~lv~e~ 178 (562)
+.+.||.|.++.||++... +..+++|....... ...+.+|+.+++.+..+ +++++++.++...+..++++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4567999999999999854 36899998755431 45688999999999744 6899999988888899999999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
++|+.+... +......++.+++.+|.++|.. +++|+|++|+||+++. .+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccC
Confidence 988766432 4566778899999999999985 7999999999999983 67899999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9e-16 Score=125.73 Aligned_cols=139 Identities=21% Similarity=0.325 Sum_probs=119.9
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC--CCcccchhhHHHHHhhhhhhc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.+++++..+++++|..||..+||+|+..++..+| +++|.+|++.++.+....++.+ +--+|+|++|+.++..+....
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvl-RalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVL-RALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHH-HHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc
Confidence 3567888999999999999999999999999999 6799999999999999998877 457899999999988776654
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCC------HHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
.... .+...+.++.||++|+|.|...||+.+|..+|+ ++.++.-. .|.+|.|+|++|++.+.
T Consensus 83 ~q~t---~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGT---YEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccCc---HHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 4332 345667899999999999999999999999884 78888764 58899999999998775
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=137.36 Aligned_cols=138 Identities=26% Similarity=0.387 Sum_probs=116.8
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+.+++.++..+++-|.. ....|.++.++|+.++....+..-+....+.+|+.+|.|++|.|+|.||+..+........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 56788889999888887 5679999999999999887777777788899999999999999999999988776655433
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------------CHHHHHHHhcCCCCCcccHHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------------SIDPLLEEADIDKDGRISLSEFRRL 538 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------------~~~~~~~~~D~d~dG~i~~~eF~~~ 538 (562)
. ++++-+|+.||.||+|+|+.+|+..++.... -++.+|+.+|.|+||.||++||+..
T Consensus 99 e------ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 99 E------EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred H------HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 2 4555689999999999999999987664221 1788999999999999999999988
Q ss_pred HHh
Q 008547 539 LRT 541 (562)
Q Consensus 539 l~~ 541 (562)
...
T Consensus 173 ~~~ 175 (193)
T KOG0044|consen 173 CKA 175 (193)
T ss_pred hhh
Confidence 765
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.2e-17 Score=172.45 Aligned_cols=259 Identities=24% Similarity=0.384 Sum_probs=201.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.+.+.+.+-+|+++.++.+.-..+|...++|+............+....+-.++-.. .+|.++.....+......++|+
T Consensus 805 ~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 805 GFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred cceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchhh
Confidence 567788999999999999987777877777765444333333334444454444323 2577766655566778899999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC---
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--- 253 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~--- 253 (562)
+|+.+++|...+ ...+..+.+.++.....+..+++|||...++|||++|.|+|+. .+++.+++|||......
T Consensus 884 ~~~~~~~~~Skl--~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 884 HYLNGGDLPSKL--HNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred HHhccCCchhhh--hcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCcccCcccccccccccc
Confidence 999999998887 3445678888889999999999999999999999999999998 68999999998432210
Q ss_pred ----C---C----------------------CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCC
Q 008547 254 ----P---G----------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK 303 (562)
Q Consensus 254 ----~---~----------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~ 303 (562)
. . .......||+.|.+||.+.+ .....+|+|++|+++++.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 0 00123578999999998766 4588999999999999999999999999
Q ss_pred ChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHH---HHhcCccccccC
Q 008547 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGG 362 (562)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~---~~l~hp~f~~~~ 362 (562)
....+++.+......++..+ ...+.++++++.++|..+|.+|..+. ++-.||||+...
T Consensus 1039 tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred chhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 99999988887665444332 24678899999999999999999887 888999999754
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-16 Score=159.52 Aligned_cols=257 Identities=25% Similarity=0.305 Sum_probs=199.6
Q ss_pred ccccceeecceeec--cCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 93 DFDRRYTIGKLLGH--GQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 93 ~~~~~y~i~~~lG~--G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
.+...+.+.+.+|. |.+|.||.+.. ..++..+|+|.-... ...+.....=.+|+.....+..|++.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 34567888999999 99999999987 788999999973221 11122333345777777788789999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHHHcCceeccCCCCceEeccCCCC-CCeEE
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR----VAAECHLHGLVHRDMKPENFLFKSAKED-SSLKA 243 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~----~l~~lH~~~iiHrDlkp~NIll~~~~~~-~~vkl 243 (562)
.+..|+-+|++. .+|..+.. .....++...++..+.+... ||..+|..+++|-|+||.||++.. + ..+++
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~-~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~---~~~s~~~ 264 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCH-TPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS---DWTSCKL 264 (524)
T ss_pred CCcceeeecccc-chhHHhhh-cccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccc---ccceeec
Confidence 999999999994 67766653 33455888999999999999 999999999999999999999984 4 78999
Q ss_pred eeccCccccCCCCCc------ccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCC--ChhhHHHHHHhC
Q 008547 244 TDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK--TEDGIFKEVLRN 315 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~~~~~ 315 (562)
+|||+...+.++... ....|...|++||...+-++...||||+|.++.+-.+|..+.... ......+...
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-- 342 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-- 342 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc--
Confidence 999998877655422 123577889999999999999999999999999998887665443 2221111111
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.+...+...+.++...+..|+..+|..|+++..++.|+++..
T Consensus 343 ---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 343 ---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 111222345667778999999999999999999999999884
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.7e-14 Score=124.71 Aligned_cols=127 Identities=26% Similarity=0.368 Sum_probs=110.9
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
-..+...|...|+|+.|.|+..||..+|...-....+.+.++.|+..+|.+.+|+|+|+||...+..+..++
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr-------- 127 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWR-------- 127 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH--------
Confidence 456788899999999999999999999965456677789999999999999999999999998887665443
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.+|+.||+|++|.|+..||+.+|..+| -++.+++.+|.-+.|.|.|++|+.+...
T Consensus 128 ----~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 128 ----NVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred ----HHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 389999999999999999999999998 2677899999777999999999987654
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.9e-13 Score=140.92 Aligned_cols=144 Identities=20% Similarity=0.230 Sum_probs=95.8
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc---------------------------hhh----------HHHH
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---------------------------PIA----------VEDV 143 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------~~~----------~~~~ 143 (562)
.+.||.|++|.||+|+. .+|+.||||+........ ... .-++
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999985 579999999875431000 000 0124
Q ss_pred HHHHHHHHHcc----CCCCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHHHc
Q 008547 144 KREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR-VAAECHLH 218 (562)
Q Consensus 144 ~~E~~~l~~l~----~hp~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~-~l~~lH~~ 218 (562)
.+|...+.++. ++++|.-..-+....+..+|||||++|++|.+....... ... ...++..++. .+..+|..
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC
Confidence 45555555553 344432211122223457899999999998876532221 122 3445666665 46789999
Q ss_pred CceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 219 ~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|++|+|++|.||++. .++.++|+|||++..+
T Consensus 277 g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 277 GFFHADLHPGNIFVL---KDGKIIALDFGIVGRL 307 (437)
T ss_pred CceeCCCCcccEEEC---CCCcEEEEeCCCeeEC
Confidence 999999999999997 4688999999998654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=119.97 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=101.6
Q ss_pred cceeeccCCeEEEEEEEcC------CCCEEEEEEeccccc-------------------CchhhHH----HHHHHHHHHH
Q 008547 101 GKLLGHGQFGYTYVATDKA------NGDRVAVKKIEKNKM-------------------ILPIAVE----DVKREVKILQ 151 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~------~~~~vaiK~~~~~~~-------------------~~~~~~~----~~~~E~~~l~ 151 (562)
...||.|.-+.||.|.... .+..+|||+...... ....... ...+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999997543 357899997632110 0011122 3348999999
Q ss_pred HccCC-CCcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHcCceeccCCCCc
Q 008547 152 ALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPEN 229 (562)
Q Consensus 152 ~l~~h-p~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~iiHrDlkp~N 229 (562)
++... -+++.++++ ..-+|||||+.++.+..... +...++...+..++.+++.+|..| |..||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L--kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL--KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh--hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 98633 466777764 45689999997654432221 123456667788899999999988 89999999999999
Q ss_pred eEeccCCCCCCeEEeeccCcccc
Q 008547 230 FLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 230 Ill~~~~~~~~vkl~DfG~a~~~ 252 (562)
||+. ++.+.|+|||.|...
T Consensus 156 IL~~----~~~v~iIDF~qav~~ 174 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEP 174 (197)
T ss_pred EEEE----CCcEEEEECCCceeC
Confidence 9996 467999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-14 Score=134.43 Aligned_cols=239 Identities=18% Similarity=0.190 Sum_probs=155.8
Q ss_pred EEEEEEEcCCCCEEEEEEecccccCchhh-HHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----eEEEEEeccCCCCh
Q 008547 111 YTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGEL 184 (562)
Q Consensus 111 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-----~~~lv~e~~~~g~L 184 (562)
.||++.++..|.+|+.-.+.......+.. .+....-..-|-.+ -|.|||+++.|+.+.. ...++.||+..|+|
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 46777777777777655443221111111 12222223344455 3999999999887543 47889999999999
Q ss_pred HHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---
Q 008547 185 LDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--- 257 (562)
Q Consensus 185 ~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~--~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~--- 257 (562)
..+|.+. ....+....+.+|+.||+.||.|||+. -|+|+++..+-|++. .++-+|+.- +.-....+.-.
T Consensus 160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~-~ap~s~h~s~~~~~ 235 (458)
T KOG1266|consen 160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGS-VAPDSTHPSVNSTR 235 (458)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecc-cCccccchhhhhhh
Confidence 9988543 345688999999999999999999987 599999999999998 467676542 21111111100
Q ss_pred ---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCC-CCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 258 ---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 258 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
...-.+-++|.+||.=.. ..+.++|||+||+...+|..+..-- .+.+.-.....+........ ..--+
T Consensus 236 ~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr 308 (458)
T KOG1266|consen 236 EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQR 308 (458)
T ss_pred HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------Ccccc
Confidence 112245678999996432 3466899999999999999876542 22222112222211111000 11124
Q ss_pred HHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.++.+|+...|..||++.+++-||.+=+.
T Consensus 309 ~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 309 GSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred CcCcccccCCCCCCcchhhhhcCceeeec
Confidence 68899999999999999999999987553
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-13 Score=145.03 Aligned_cols=149 Identities=21% Similarity=0.260 Sum_probs=93.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--------------------------ch-----hhHHH---
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--------------------------LP-----IAVED--- 142 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------~~-----~~~~~--- 142 (562)
.|.. +.||+|++|.||+|+.+.+|+.||||++.+.... .+ ...+.
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 7899999999999998888999999998653100 00 11222
Q ss_pred ---HHHHHHHHHHcc---CCCCcceEEEEEE-cCCeEEEEEeccCCCChHHHHHhhcCC----CCCHHHHHHHHHHHHHH
Q 008547 143 ---VKREVKILQALA---GHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDS----RYTEKDAAVVVRQMLRV 211 (562)
Q Consensus 143 ---~~~E~~~l~~l~---~hp~iv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~----~l~~~~~~~i~~qi~~~ 211 (562)
+.+|+..+.++. .+...+.+-.++. ..+..+|||||+.|+.+.+.-.....+ .+.+..+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 334444444442 1222233323332 245578999999999997642212212 23333344444444
Q ss_pred HHHHHHcCceeccCCCCceEeccC-CCCCCeEEeeccCccccC
Q 008547 212 AAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 212 l~~lH~~~iiHrDlkp~NIll~~~-~~~~~vkl~DfG~a~~~~ 253 (562)
...|++|+|+||.||+++.. ..++.++++|||++..+.
T Consensus 277 ----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 46999999999999999842 122489999999987653
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=112.69 Aligned_cols=149 Identities=20% Similarity=0.265 Sum_probs=111.9
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...+|-+|+-+.|+++. ..|+.++||.=.......| -......+|+++|.++. --.|.-..-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 46678899999999995 6688888885433333333 34556778999999885 4455444445566666788
Q ss_pred EEeccCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 175 AMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 175 v~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|||++| .++.+++..........+....++..|-+.+.-||.++|||+||..+||+|.+.+.+..+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999987 3566666555444444555578999999999999999999999999999999877777789999999864
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.3e-12 Score=118.71 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=95.2
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEeccC
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 180 (562)
.+.|+.|.++.||++.. .+..|++|....... ....+.+|+.+++.+.....+++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 35689999999999974 377899998754421 12345789999999863333455655443 23479999999
Q ss_pred CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCc-----eeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL-----VHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 181 ~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-----iHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
|.++... . .....++.+++.+|..||..++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~-------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE-------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc-------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence 9877542 0 1123457899999999999985 9999999999997 35699999998764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-12 Score=123.21 Aligned_cols=133 Identities=28% Similarity=0.419 Sum_probs=115.0
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCc-ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..+++...+++.+|+.||.+++|.++..++...+.. ++.. +..+-...++..+|.|.||.+||.||...+..
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~-l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~------ 79 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK-LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN------ 79 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh-cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH------
Confidence 345666778999999999999999999999999865 5444 67778889999999999999999999865432
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. +.++.++|..+|.+.||.|+.+|+.+.|...+ ++.++|+.+|.|+++.|+++||...+.-
T Consensus 80 ~-----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 80 K-----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred h-----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 1 24677899999999999999999999999888 3788999999999999999999988764
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.6e-13 Score=136.23 Aligned_cols=251 Identities=18% Similarity=0.172 Sum_probs=181.9
Q ss_pred ccceeecceeeccCCeEEEEEEEc-CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..+|..+..||.|.|+.|+.+..+ .++..|++|.+....... .....-..|+-+...+.-|.+++.++..|......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch-HhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 456888999999999999988655 677889999876543322 222333467777777767999999888888777888
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+-.|||+++++.... .-...+.+...+.+..|++.++.++|+..++|+|+||+||++... .+..++.|||.+..+.
T Consensus 343 ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFSKLGDFGCWTRLA 418 (524)
T ss_pred CchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhhhccccccccccc
Confidence 999999999876544 223457788899999999999999999999999999999999842 2788999999875321
Q ss_pred CCCCcccccCCCcccC-chhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 254 PGKKFQDIVGSAYYVA-PEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~a-PE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
-......++-++.| +|++... ...+.|++|||..+.+.++|...-+...... .+..+. .+..+....+
T Consensus 419 --~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~~~----~p~~~~~~~~ 489 (524)
T KOG0601|consen 419 --FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRSGD----TPNLPGLKLQ 489 (524)
T ss_pred --eecccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeeccc----ccCCCchHHh
Confidence 11112233445553 6665443 3788999999999999999875543332211 111111 1122345577
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
+..+.+.++..++..||.+.++..|+=|-
T Consensus 490 ~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 490 LQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhhhcCCccccchhhhhhcccchhh
Confidence 88999999999999999999988876553
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-12 Score=121.66 Aligned_cols=136 Identities=30% Similarity=0.412 Sum_probs=107.4
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
.+..-.+.|+..|.|+||.++.+||..+|+..--..+..--+..-+...|.|+||.|+++||+.-+..... ..+.++|
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~--~~~epeW 238 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG--NEEEPEW 238 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC--CCCCccc
Confidence 45566788999999999999999999998543334445566677788899999999999999987765443 2333444
Q ss_pred HHH-HHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 482 HLR-SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 482 ~~~-~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
... -.+.|..+|+|+||+++.+|++.++...+ ++..++-++|.|+||++|++|-+.-.
T Consensus 239 v~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~ 303 (325)
T KOG4223|consen 239 VLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHY 303 (325)
T ss_pred ccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCc
Confidence 433 23456899999999999999999998776 47889999999999999999987544
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.6e-12 Score=104.50 Aligned_cols=139 Identities=21% Similarity=0.380 Sum_probs=106.1
Q ss_pred hccccchHHhhhhccccccccCCC-----CC------CCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDK-----NG------SISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~-----~G------~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~e 462 (562)
-.+-++..++-++...|..+.++. .| .+..+.+.. +++...+.--+++.+.+..||.|.++|++
T Consensus 18 DCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~k-----MPELkenpfk~ri~e~FSeDG~Gnlsfdd 92 (189)
T KOG0038|consen 18 DCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEK-----MPELKENPFKRRICEVFSEDGRGNLSFDD 92 (189)
T ss_pred ccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhh-----ChhhhcChHHHHHHHHhccCCCCcccHHH
Confidence 345677788888888887764331 11 344444332 44444455566788889999999999999
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCccc
Q 008547 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRIS 531 (562)
Q Consensus 463 f~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~ 531 (562)
|+.++..+....+ +..++..+|+.||-|+|++|...+|...+..+. .++++++++|.||||+++
T Consensus 93 FlDmfSV~sE~AP-----rdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~ 167 (189)
T KOG0038|consen 93 FLDMFSVFSEMAP-----RDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLS 167 (189)
T ss_pred HHHHHHHHHhhCh-----HHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCccc
Confidence 9998887755433 235788899999999999999999999887654 278999999999999999
Q ss_pred HHHHHHHHHhc
Q 008547 532 LSEFRRLLRTA 542 (562)
Q Consensus 532 ~~eF~~~l~~~ 542 (562)
+.||..++.++
T Consensus 168 ~~eFe~~i~ra 178 (189)
T KOG0038|consen 168 FAEFEHVILRA 178 (189)
T ss_pred HHHHHHHHHhC
Confidence 99999998764
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.6e-11 Score=125.65 Aligned_cols=182 Identities=19% Similarity=0.258 Sum_probs=133.5
Q ss_pred eeecceeeccCCeEEE-EEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 98 YTIGKLLGHGQFGYTY-VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy-~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
|.+ ...+-++.+ || .|..+.++.+|.|...+.... .....+.+-+.-|+.|+ ||||+++++.+...+.+|||+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEe
Confidence 555 334444444 44 466678899999998865542 34556778888999996 999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|-+. .|..++.. ++...+...+.||+.||.||| +.+++|++|.-+.|+++ ..|..||++|-++......
T Consensus 89 ErV~--Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn---~~GeWkLggle~v~~~~~~ 158 (690)
T KOG1243|consen 89 ERVR--PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN---ESGEWKLGGLELVSKASGF 158 (690)
T ss_pred eccc--cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc---CCCcEEEeeeEEEeccccC
Confidence 9984 45555522 346777888999999999997 67899999999999998 6899999999887543221
Q ss_pred CC-cccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhC
Q 008547 256 KK-FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 296 (562)
Q Consensus 256 ~~-~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g 296 (562)
.. ......--.|..|+.+... ....|.|-|||++++++.|
T Consensus 159 ~~~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 159 NAPAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred CcccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence 11 1111122246666654322 1456999999999999998
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-12 Score=119.42 Aligned_cols=141 Identities=26% Similarity=0.348 Sum_probs=111.1
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh----cc
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL----EE 475 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~----~~ 475 (562)
.+...++..+|..+|.++||.|+..|+..++.. ........++.+-+..+|.|.||.|+|+|++......... ..
T Consensus 73 ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~-s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d 151 (325)
T KOG4223|consen 73 EESQERLGKLVPKIDSDSDGFVTESELKAWIMQ-SQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPD 151 (325)
T ss_pred chhHHHHHHHHhhhcCCCCCceeHHHHHHHHHH-HHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcccccc
Confidence 446778999999999999999999999999865 3344455677778888999999999999999877753211 00
Q ss_pred ----cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 ----HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ----~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.........-++-|+.-|.|+||.++.+||..+|.... .|.+.+...|+|+||+|+++||+.-|..
T Consensus 152 ~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~ 228 (325)
T KOG4223|consen 152 EEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS 228 (325)
T ss_pred chhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence 11111122345679999999999999999999998765 2788999999999999999999977654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5e-11 Score=105.21 Aligned_cols=135 Identities=25% Similarity=0.317 Sum_probs=98.7
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----hHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
..+++|+-+.+|.+.+ -|..+++|.=.+.....+. ....-.+|+.++.++. --.|...+=+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 3578999999999954 4556777753333333332 3445678999999885 345544444555667778999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||++|..|.+.+... ...++..+-.-+.-||..||||+||.++||++. .+.+.++|||++.+.
T Consensus 79 e~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s 141 (204)
T COG3642 79 EYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFS 141 (204)
T ss_pred EEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccccc
Confidence 999988777777332 245677777778889999999999999999997 345999999999753
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=104.00 Aligned_cols=120 Identities=24% Similarity=0.258 Sum_probs=96.5
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc-----
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE----- 475 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~----- 475 (562)
+...-...+|..||.|+||.|+..||..+|.. +-....++.+.+.|+.+|.|++|.|+++|++.++..+.....
T Consensus 61 d~~~y~~~vF~~fD~~~dg~i~F~Efi~als~-~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~ 139 (193)
T KOG0044|consen 61 DASKYAELVFRTFDKNKDGTIDFLEFICALSL-TSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP 139 (193)
T ss_pred CHHHHHHHHHHHhcccCCCCcCHHHHHHHHHH-HcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC
Confidence 33455566799999999999999999999954 555556788999999999999999999999998877665433
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 521 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 521 (562)
.........+.++|+.+|.|+||.||.+||.........+..++..
T Consensus 140 ~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~ 185 (193)
T KOG0044|consen 140 EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALEQ 185 (193)
T ss_pred cccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhhh
Confidence 1223345678899999999999999999999988877666665543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=107.12 Aligned_cols=241 Identities=20% Similarity=0.211 Sum_probs=157.5
Q ss_pred eecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEE------EEc-CCe
Q 008547 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA------FED-DNY 171 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~------~~~-~~~ 171 (562)
..++.||+|+-+.+|-.- .-+.. +.|++..... ....+ -+..|.....||-+..-+.| .-+ +..
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d~-VAKIYh~Ppp---a~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRDQ-VAKIYHAPPP---AAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecc--hhhch-hheeecCCCc---hHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 356789999999999763 22333 4587765532 12222 22333344456544331111 112 223
Q ss_pred EEEEEeccCCCChHHHHH-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 172 VYIAMELCEGGELLDRIL-----AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~-----~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+-++|..++|..=-..+. ++......+.-+.+.++.|+.+...||..|.+-+|+.++|+|++ +++.|.|+|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcc
Confidence 678888887753222221 23334577899999999999999999999999999999999998 5888999986
Q ss_pred cCccccCCCCCcccccCCCcccCchhcc-----c-CCCCCcchHHHHHHHHHHHhC-CCCCCCCCh----hhHHH-HHHh
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-----R-KSGPESDVWSIGVITYILLCG-RRPFWDKTE----DGIFK-EVLR 314 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~~DiwslG~il~el~~g-~~pf~~~~~----~~~~~-~~~~ 314 (562)
..-.....+..+...+|.+.|.+||.-. + ..+...|-|.||+++++++.| +.||.+... ..-++ .|..
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 5433334455556678999999999743 2 226778999999999999885 999965321 11111 1111
Q ss_pred C------------CCCCCCCCCCCCCHHHHHHHHHcCcc--CccCCCCHHH
Q 008547 315 N------------KPDFRRKPWPSISNSAKDFVKKLLVK--DPRARLTAAQ 351 (562)
Q Consensus 315 ~------------~~~~~~~~~~~~~~~~~~ll~~~l~~--dP~~Rps~~~ 351 (562)
+ .+.....+|.-+++.+..+..+|+.. ++.-|||++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 1 11112234556889999999999984 3568998754
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=123.35 Aligned_cols=105 Identities=21% Similarity=0.296 Sum_probs=88.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CcccHHH---HHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~---~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
+.+...|+.++.++|+.+|+|++|.+ +..++ +.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+.++..+.
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~il-rslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg 209 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIF-VSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG 209 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHH-HHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc
Confidence 45677788999999999999999997 77777 4588 5788776 79999999999999999999998887542
Q ss_pred hhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 472 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
. ... .+++.++|+.||+|++|+|+.+||+.++..
T Consensus 210 ~---~~s---eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 N---LVA---ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred c---CCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 2 111 357899999999999999999999999877
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.7e-10 Score=107.34 Aligned_cols=143 Identities=29% Similarity=0.450 Sum_probs=103.1
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccC-CCCcceEEEEEEcC---CeEEEEEe
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDD---NYVYIAME 177 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-hp~iv~l~~~~~~~---~~~~lv~e 177 (562)
+.||.|..+.||++... .|+.+++|........ .....+.+|+.+++.+.. +..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999753 3678999987554321 134567899999999963 23467777776654 36789999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---------------------------------------- 217 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---------------------------------------- 217 (562)
|++|.++...+.. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999877654311 345666666777777777777763
Q ss_pred ----------------cCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 218 ----------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 218 ----------------~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
..++|+|+.|.||+++.. ..+.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 236999999999999841 145688999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-10 Score=87.59 Aligned_cols=56 Identities=48% Similarity=0.748 Sum_probs=50.6
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC----------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
+++++|+.||+|++|+|+.+||..++...+ .++.+|+.+|.|+||.|+|+||.++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 367899999999999999999999998877 26667999999999999999999886
|
... |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-10 Score=91.18 Aligned_cols=61 Identities=16% Similarity=0.285 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcC-CCCCccCHHHHHHHhcc-cC-------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDI-DRDGFITPEELRMHTGL-KG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D~-d~~G~I~~~El~~~l~~-~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..++.+|+.||+ +++|+|+..||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 468889999999 99999999999999977 54 389999999999999999999999998754
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.5e-09 Score=106.71 Aligned_cols=213 Identities=18% Similarity=0.241 Sum_probs=152.5
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE----cCCeEEEEEeccCC-C
Q 008547 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDNYVYIAMELCEG-G 182 (562)
Q Consensus 108 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~----~~~~~~lv~e~~~~-g 182 (562)
--.+.|++....+|..|++|.+....... ......-+++++++. |+|||++.++|. .+..+++|++|+++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~---~nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS---TNKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC---cccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 34578999999999999999984332211 122335678899995 999999999887 35579999999985 5
Q ss_pred ChHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 183 ELLDRILAKK-------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 183 ~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
+|.+...... +...+++.++.++.||..||.++|+.|+.-+-|.|.+||++. +..++|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G---~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG---KMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC---cceEEEecccce
Confidence 7776654321 234678999999999999999999999999999999999983 457888877766
Q ss_pred cccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhH--HHHHHhCCCCCCCCCCCCC
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--FKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 327 (562)
..+..... |.+. .-.+-|.=.||.+++.|.||..--+..+.... ...+. +..
T Consensus 441 Dvl~~d~~-------------~~le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y 494 (655)
T KOG3741|consen 441 DVLQEDPT-------------EPLE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY 494 (655)
T ss_pred eeecCCCC-------------cchh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence 55443320 1111 12356888999999999999655332222111 11111 356
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+++++|.-+...++++ -++.+++.
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 788999999998888886 67777764
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-10 Score=119.55 Aligned_cols=152 Identities=22% Similarity=0.297 Sum_probs=110.9
Q ss_pred HHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcc----------cccCCCcccCchhccc
Q 008547 207 QMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----------DIVGSAYYVAPEVLKR 275 (562)
Q Consensus 207 qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~----------~~~gt~~y~aPE~~~~ 275 (562)
+.+.|+.|+|. .++||+.|.|++|.++ ..+.+||+.|+++....++..+. -..-...|.|||++.+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34489999996 5899999999999998 58899999999987655432211 1123457999998876
Q ss_pred C-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCC-CCCCCCCHHHHHHHHHcCccCccCCCCHHHH
Q 008547 276 K-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 352 (562)
Q Consensus 276 ~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~ 352 (562)
. .+.++|+||+|+++|.+.. |+..+........+ ........... ..-.++|.++++=|.+++..++.-||++..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 4 4889999999999999994 55555443332222 22111111111 1115789999999999999999999999999
Q ss_pred hcCccccccC
Q 008547 353 LSHPWVREGG 362 (562)
Q Consensus 353 l~hp~f~~~~ 362 (562)
+..|||...+
T Consensus 263 ~~~~ff~D~~ 272 (700)
T KOG2137|consen 263 LSIPFFSDPG 272 (700)
T ss_pred hcccccCCch
Confidence 9999999854
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-08 Score=99.23 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=94.7
Q ss_pred eEEEEEEEcCCCCEEEEEEecccccCc---h-----hhHHHHHHHHHHHHHccCCCCc--ceEEEEEEc-----CCeEEE
Q 008547 110 GYTYVATDKANGDRVAVKKIEKNKMIL---P-----IAVEDVKREVKILQALAGHENV--VKFYNAFED-----DNYVYI 174 (562)
Q Consensus 110 g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-----~~~~~~~~E~~~l~~l~~hp~i--v~l~~~~~~-----~~~~~l 174 (562)
..|.++. ..|+.|.||......... . .-...+.+|...+..|. .-+| +.+++++.. ....++
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEE
Confidence 3455553 356788888663322110 0 01114678998888884 2233 233444432 235789
Q ss_pred EEeccCCC-ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC----CCCCCeEEeeccCc
Q 008547 175 AMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----KEDSSLKATDFGLS 249 (562)
Q Consensus 175 v~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~----~~~~~vkl~DfG~a 249 (562)
|+|++++. +|.+++........+......++.+++..+.-||..||+|+||++.|||++.. .+...+.|+||+.+
T Consensus 113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99999875 67777643323455677788999999999999999999999999999999841 24578999999987
Q ss_pred cc
Q 008547 250 DF 251 (562)
Q Consensus 250 ~~ 251 (562)
..
T Consensus 193 ~~ 194 (268)
T PRK15123 193 QI 194 (268)
T ss_pred cc
Confidence 53
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-09 Score=96.78 Aligned_cols=129 Identities=26% Similarity=0.288 Sum_probs=81.8
Q ss_pred EEEEEEEcCCCCEEEEEEeccc-----------------------ccCchhhHHHHHHHHHHHHHccCC-CCcceEEEEE
Q 008547 111 YTYVATDKANGDRVAVKKIEKN-----------------------KMILPIAVEDVKREVKILQALAGH-ENVVKFYNAF 166 (562)
Q Consensus 111 ~Vy~~~~~~~~~~vaiK~~~~~-----------------------~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~l~~~~ 166 (562)
.||.|.. ..|..+|+|+.... ............+|.+.|.++... -++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899974 46779999976321 011222345678899999999633 2567776543
Q ss_pred EcCCeEEEEEeccC--CCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH-HHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 167 EDDNYVYIAMELCE--GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 167 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~-lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
.-+|||||++ |..+. .+... .++......++.+++..+.. +|..||+|+||.+.|||++ .+.+.|
T Consensus 80 ----~~~ivME~I~~~G~~~~-~l~~~---~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~i 147 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLP-RLKDV---DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYI 147 (188)
T ss_dssp ----TTEEEEE--EETTEEGG-CHHHC---GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE
T ss_pred ----CCEEEEEecCCCccchh-hHHhc---cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEE
Confidence 2369999998 54443 33221 12244567788888885555 6899999999999999998 348999
Q ss_pred eeccCcccc
Q 008547 244 TDFGLSDFI 252 (562)
Q Consensus 244 ~DfG~a~~~ 252 (562)
+|||.+...
T Consensus 148 IDf~qav~~ 156 (188)
T PF01163_consen 148 IDFGQAVDS 156 (188)
T ss_dssp --GTTEEET
T ss_pred EecCcceec
Confidence 999988654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.9e-10 Score=86.99 Aligned_cols=61 Identities=20% Similarity=0.325 Sum_probs=54.7
Q ss_pred HHHHHHHHHhc-CCCCC-ccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..++++|+.|| +||+| +|+.+||+.+|.. .+ +++++|+.+|.|+||+|+|+||+.++.+..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 46788999998 89999 5999999999987 55 389999999999999999999999998754
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.6e-09 Score=93.24 Aligned_cols=100 Identities=25% Similarity=0.266 Sum_probs=85.9
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 513 (562)
..++..+|..+|.+++|.|+-+|+-.++..+..... ..++..++..+|.|++|.|+.+||..++....
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t------~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT------EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 356788999999999999999999988876655433 35788899999999999999999999886443
Q ss_pred -----CHHHHHHHhcCCCCCcccHHHHHHHHHhcccc
Q 008547 514 -----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 545 (562)
Q Consensus 514 -----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~~ 545 (562)
++.++|+.+|.|+||.|+.+|+..+|...+-.
T Consensus 81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~ 117 (151)
T KOG0027|consen 81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK 117 (151)
T ss_pred cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc
Confidence 47889999999999999999999999876543
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-09 Score=86.65 Aligned_cols=71 Identities=24% Similarity=0.418 Sum_probs=63.2
Q ss_pred hHHhhhhccccccccC-CCCCCCCHHHHHHHHHhhCCCcccH-HHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~-~~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..|.++|..||. +++|+|+..||+.+|...+|..++. ++++.+++.+|.|+||.|+|+||+..+..+
T Consensus 4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3457789999999999 9999999999999996658877777 899999999999999999999999877654
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.2e-09 Score=97.61 Aligned_cols=138 Identities=28% Similarity=0.301 Sum_probs=103.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecc-------------------cccCchhhHHHHHHHHHHHHHccCC-C
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK-------------------NKMILPIAVEDVKREVKILQALAGH-E 157 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~-------------------~~~~~~~~~~~~~~E~~~l~~l~~h-p 157 (562)
+.++.+||-|.-|.||.|.+. .|.++|||.-.. ...+.-.......+|.++|.+|.++ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999865 688999995321 0111123455678999999999533 3
Q ss_pred CcceEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 158 ~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
.+++.++ .+.-.+||||++|-.|...- +..+....++..|++-+.-+-..||||+|+.+-||+++ +
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~ 237 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---E 237 (304)
T ss_pred CCCCccc----cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---c
Confidence 5666665 34568999999987664422 23555667778888888777799999999999999999 5
Q ss_pred CCCeEEeeccCcc
Q 008547 238 DSSLKATDFGLSD 250 (562)
Q Consensus 238 ~~~vkl~DfG~a~ 250 (562)
++.+.++||--+.
T Consensus 238 dg~~~vIDwPQ~v 250 (304)
T COG0478 238 DGDIVVIDWPQAV 250 (304)
T ss_pred CCCEEEEeCcccc
Confidence 7899999997554
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.4e-09 Score=89.44 Aligned_cols=107 Identities=20% Similarity=0.297 Sum_probs=81.2
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
+....++. .+.++|..+|. +.|.|+..+|..+|...+....+++++.+.|+.||.|++|.|+..|+..++..+...
T Consensus 49 lg~~~s~~---ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~ 124 (160)
T COG5126 49 LGFNPSEA---EINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGER 124 (160)
T ss_pred cCCCCcHH---HHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhccc
Confidence 34444554 44455666667 888999999999987777777788899999999999999999999988776633222
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
.. .+++.++++.+|.|++|+|+.+||.+++.
T Consensus 125 ~~------deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 125 LS------DEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred CC------HHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 11 35788889999999999999999988654
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.4e-09 Score=85.20 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=53.0
Q ss_pred HHHHHHHHHhc-CCCCC-ccCHHHHHHHhccc------C-----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFD-IDRDG-FITPEELRMHTGLK------G-----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~~------~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..++++|..|| +||+| +|+.+||+.++... . +++++++++|.|+||.|+|+||+.+|.+..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 46778899999 88999 59999999999541 1 399999999999999999999999998754
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=90.89 Aligned_cols=101 Identities=18% Similarity=0.273 Sum_probs=83.2
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
.+..+|..+|.+++|.|+..||..++..........+.+..+|+.+|.+++|.|+.+||..++...... .. ...
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~---l~---~~~ 127 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGET---IT---DEE 127 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CC---HHH
Confidence 467888889999999999999999886544555667889999999999999999999999877643211 11 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
+..+|..+|.|++|.|+.+||..++..
T Consensus 128 ~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 128 LQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 788999999999999999999988764
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.1e-08 Score=90.53 Aligned_cols=113 Identities=21% Similarity=0.240 Sum_probs=92.1
Q ss_pred ccccccccCCCCCC-CCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc-ccHHHHHH
Q 008547 407 RDQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-DSEKWHLR 484 (562)
Q Consensus 407 ~~~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~-~~~~~~~~ 484 (562)
.++++.||++++|. |+.++|..++.-..+....++.+.-.|+.||.+++|.|+.+|+..++..+...... ..+.....
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 35677788888888 99999999997766777777799999999999999999999999888766553222 12345677
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHH
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLL 519 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~ 519 (562)
+...|..+|.|+||+|+.+|+..++.....+.+.|
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~m 183 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEKM 183 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHHc
Confidence 89999999999999999999999998776555443
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.3e-09 Score=79.74 Aligned_cols=62 Identities=32% Similarity=0.575 Sum_probs=52.3
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcc----cHHHHHHHHHhcCCCCCcccchhhHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
+|+++|..+|.|++|+|+.+||..++.. ++... ..+.++.+|+.+|.|++|.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999999965 66544 34556666999999999999999998653
|
... |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-08 Score=91.69 Aligned_cols=87 Identities=29% Similarity=0.472 Sum_probs=78.0
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
-++.++.+|..+|.|+.|.|+..||+.+|.. +|..++..-++.+++.+|..+.|.|+|++|+..+..+
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~-~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L----------- 189 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALTQ-LGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL----------- 189 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHHH-cCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH-----------
Confidence 4788999999999999999999999999965 9999999999999999998889999999999877654
Q ss_pred HHHHHHHHHHhcCCCCCccC
Q 008547 482 HLRSQAAFEKFDIDRDGFIT 501 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~ 501 (562)
..+.++|+.+|.+.+|.|+
T Consensus 190 -~~lt~~Fr~~D~~q~G~i~ 208 (221)
T KOG0037|consen 190 -QRLTEAFRRRDTAQQGSIT 208 (221)
T ss_pred -HHHHHHHHHhccccceeEE
Confidence 3556689999999999865
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.8e-09 Score=81.85 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=61.7
Q ss_pred HHhhhhcccccccc-CCCCC-CCCHHHHHHHHHh----hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAID-VDKNG-SISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~----~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.-+..+.++|..|| .|++| +|+..||+.+|.. .+|..+++++++.+++.+|.|++|.|+|+||+..+...
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678999999998 89999 5999999999954 37888899999999999999999999999999776543
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=98.59 Aligned_cols=145 Identities=24% Similarity=0.299 Sum_probs=105.7
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc-ccc---
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-HDS--- 478 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~-~~~--- 478 (562)
..+|.+.|..+|.++.|+|+...+..++..++|.+++=..+.. +....+.||.+.|.+-+..+....-... ..+
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 4578888999999999999999999999998888877433322 2234456788988887654432111110 000
Q ss_pred --HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----------CHHHHHHHhcCCCCCcccHHHHHHHHHhccccC
Q 008547 479 --EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 546 (562)
Q Consensus 479 --~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~~~ 546 (562)
-.....+..+|+.+|.|++|.|+.+||+.+..... ++-++-+.+|.|+||.|++.||.+.++-+....
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~~ 620 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRRR 620 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcchh
Confidence 00123567799999999999999999999876554 377788889999999999999999998665544
Q ss_pred CCC
Q 008547 547 RNV 549 (562)
Q Consensus 547 ~~~ 549 (562)
+..
T Consensus 621 ~~~ 623 (631)
T KOG0377|consen 621 STG 623 (631)
T ss_pred hcC
Confidence 433
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.3e-09 Score=81.55 Aligned_cols=61 Identities=23% Similarity=0.410 Sum_probs=53.5
Q ss_pred HHHHHHHHH-hcCCCCC-ccCHHHHHHHhccc-----------CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEK-FDIDRDG-FITPEELRMHTGLK-----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~-~D~d~~G-~I~~~El~~~l~~~-----------~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|+. +|+||+| +|+.+||+.++... .+++++|+.+|.|+||.|+|+||+.+|....
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 467889999 8898986 99999999999765 1489999999999999999999999998754
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-08 Score=82.13 Aligned_cols=62 Identities=21% Similarity=0.389 Sum_probs=53.9
Q ss_pred HHHHHHHHHhcC-CC-CCccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 483 LRSQAAFEKFDI-DR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 483 ~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
..++.+|..||. || +|+|+.+||+.++.. .+ +++.+|..+|.|+||.|+|+||+.+|.+.++
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 468889999997 97 699999999998864 11 4899999999999999999999999987654
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-08 Score=79.68 Aligned_cols=61 Identities=23% Similarity=0.334 Sum_probs=53.6
Q ss_pred HHHHHHHHHhcC-CC-CCccCHHHHHHHhcc---cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDI-DR-DGFITPEELRMHTGL---KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~---~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..||. || +|+|+.+||+.++.. .+ +++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 467789999998 78 899999999999962 34 499999999999999999999999998754
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.1e-08 Score=81.43 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.||+|++|.|+.+||+.++...+ ++..+|..+|.+++|.|+|+||+.+|....
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 45788899999999999999999999997665 488999999999999999999999887654
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-08 Score=81.84 Aligned_cols=61 Identities=20% Similarity=0.353 Sum_probs=53.5
Q ss_pred HHHHHHHHHhc-CCCCCc-cCHHHHHHHhcc-cC----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFD-IDRDGF-ITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D-~d~~G~-I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..++++|+.|| +|++|+ |+.+||+.+|.. .+ +++.+|..+|.|++|.|+|+||+.++....
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 57889999997 999995 999999999964 21 489999999999999999999999998653
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.73 E-value=2e-07 Score=87.44 Aligned_cols=109 Identities=22% Similarity=0.271 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHccCCCC--cceEEEEEEcC----CeEEEEEeccCCC-ChHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 008547 140 VEDVKREVKILQALAGHEN--VVKFYNAFEDD----NYVYIAMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212 (562)
Q Consensus 140 ~~~~~~E~~~l~~l~~hp~--iv~l~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l 212 (562)
.....+|...+..|. .-. .+..+++.... ...++|+|++++. +|.+.+.... .++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHH
Confidence 445778888877775 222 34445554432 2458999999874 6777664322 266777889999999999
Q ss_pred HHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 213 ~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.-||.+||+|+|++|.|||++..+....+.|+||+.++.
T Consensus 132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999999999999999644455899999998765
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.8e-08 Score=85.50 Aligned_cols=101 Identities=22% Similarity=0.328 Sum_probs=81.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..+..+|..+|.+++|.|+.+||..++...+......+.+..+|..+|.+++|.|+.+||..++...... .. ..
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~---~~---~~ 120 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEK---LT---DE 120 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCC---CC---HH
Confidence 4667888889999999999999999986544444556788999999999999999999998877643211 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
.+..+|..+|.+++|.|+.+||..++.
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 677899999999999999999988764
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.8e-08 Score=80.67 Aligned_cols=72 Identities=22% Similarity=0.365 Sum_probs=64.3
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
++++++..+.++|..+|.+++|.|+.+||..++.. .+ .+++++..++..+|.+++|.|+|+||+.++.....
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999955 55 57889999999999999999999999988776544
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.7e-08 Score=78.77 Aligned_cols=71 Identities=21% Similarity=0.388 Sum_probs=62.7
Q ss_pred hHHhhhhccccccccC-CC-CCCCCHHHHHHHHHh--hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAIDV-DK-NGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~-~~-~G~i~~~el~~~l~~--~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
++.+..|-.+|..+|. ++ +|+|+.+||+.++.+ .+|...++++++.+++.+|.|++|.|+|+||+..+..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4567788999999998 77 899999999999964 37999999999999999999999999999998776644
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.7e-08 Score=74.17 Aligned_cols=57 Identities=32% Similarity=0.529 Sum_probs=51.0
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 486 QAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 486 ~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
+++|+.+|.|++|.|+.+|++.++...+ ++..+|..+|.+++|.|+|+||+.++.-.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4589999999999999999999987665 38889999999999999999999988643
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.5e-08 Score=80.42 Aligned_cols=60 Identities=30% Similarity=0.360 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 481 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+...+.-+|..+|.|+||+|+.+||..+..... .+..+|..+|.|+||.||++||...+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 346788899999999999999999998862221 278899999999999999999999883
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.5e-07 Score=82.31 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=99.7
Q ss_pred eccCCeEEEEEEEcCCCCEEEEEEecc---cccCchhhHHHHHHHHHHHHHccC--CCCcceEEEEEE---c--CCeEEE
Q 008547 105 GHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQALAG--HENVVKFYNAFE---D--DNYVYI 174 (562)
Q Consensus 105 G~G~~g~Vy~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~l~~~~~---~--~~~~~l 174 (562)
|+||.+-|+... ..|+.+-+|.-.. .....|.....|.+|+..|..|.. -| ++++. ++. . .-..+|
T Consensus 27 ~rgG~SgV~r~~--~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 27 RRNGMSGVQCVE--RNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred CCCCcceEEEEE--eCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccc-eeeeeccCCceEEEE
Confidence 678999999875 3345678887542 111224566789999999998862 22 44444 222 1 224679
Q ss_pred EEeccCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 175 AMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 175 v~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
|+|-+.| -+|.+.+....-.+.+......++.+++.++.-||+.|+.|+|+.+.||+++.. +...|+++||--++
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r 178 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSR 178 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccc
Confidence 9997764 466666644334456778888999999999999999999999999999999842 23459999997654
|
|
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.8e-08 Score=78.01 Aligned_cols=62 Identities=19% Similarity=0.365 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcC--CCCCccCHHHHHHHhcc-c----------CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDI--DRDGFITPEELRMHTGL-K----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~--d~~G~I~~~El~~~l~~-~----------~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|..||+ |++|+|+.+||..++.. . .+++.++..+|.+++|.|+|+||+.+|...+
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 3568889999999 89999999999999864 1 2488899999999999999999999998754
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=80.35 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=85.6
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
..++.++...+|+++.|+|+.++|...+...++..-+.+++...|+.+|.|++|.|++.+|..+...+..... .
T Consensus 68 k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenlt------D 141 (172)
T KOG0028|consen 68 KEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLT------D 141 (172)
T ss_pred hHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcccc------H
Confidence 3455566677889999999999999998777888889999999999999999999999999876655433222 2
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
+++++.-.-+|.|++|-|+.+||..+++.
T Consensus 142 ~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 142 EELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 46777888999999999999999888764
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.7e-08 Score=78.08 Aligned_cols=70 Identities=24% Similarity=0.369 Sum_probs=58.9
Q ss_pred HHhhhhcccccccc-CCCCC-CCCHHHHHHHHHhhC----CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.-+..+.++|..|| .|++| +|+..||+.++...+ ....+..+++.+++.+|.|++|.|+|+||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45678889999999 78999 599999999996533 334467899999999999999999999999877654
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.2e-08 Score=77.79 Aligned_cols=70 Identities=27% Similarity=0.463 Sum_probs=60.9
Q ss_pred hHHhhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCcc----cHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 400 DEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
++++..+.++|..+|. +++|.|+..||..++...+|..+ +++++..++..+|.+++|.|+|+||+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 5678889999999999 89999999999999965355443 5899999999999999999999999987654
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-07 Score=76.57 Aligned_cols=69 Identities=28% Similarity=0.412 Sum_probs=58.7
Q ss_pred Hhhhhcccccccc-CCCCCC-CCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 402 ELADLRDQFDAID-VDKNGS-ISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 402 ~~~~l~~~F~~~D-~~~~G~-i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
-+..+.++|..|| .+++|+ |+..||+.+|...+| ..++.++++.+++.+|.+++|.|+|+||+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3467999999997 999995 999999999954343 45688999999999999999999999999876644
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.7e-07 Score=81.46 Aligned_cols=141 Identities=21% Similarity=0.285 Sum_probs=90.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhH------HHHHHHHHHHHHcc--CCCCcceEEEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV------EDVKREVKILQALA--GHENVVKFYNA 165 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~~~E~~~l~~l~--~hp~iv~l~~~ 165 (562)
+...|.+.+.+-......|.+. ...|+.+++|............. ....+++..+.++. +--.+..++-+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 4567888888888777777666 45678899997654322111111 11234444444443 12222232222
Q ss_pred E-----EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 166 F-----EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 166 ~-----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
. .-....++||||++|..|.+.. .+++ .++..|.+++.-||..|+.|+|..|.|+++. ++.
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~------~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~ 172 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIE------DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNG 172 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccch------hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCc
Confidence 2 2234567899999998876532 1222 3456677889999999999999999999997 455
Q ss_pred eEEeeccCcc
Q 008547 241 LKATDFGLSD 250 (562)
Q Consensus 241 vkl~DfG~a~ 250 (562)
++++||+..+
T Consensus 173 i~iID~~~k~ 182 (229)
T PF06176_consen 173 IRIIDTQGKR 182 (229)
T ss_pred EEEEECcccc
Confidence 9999998654
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-07 Score=92.24 Aligned_cols=128 Identities=20% Similarity=0.284 Sum_probs=91.1
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhh-----CCC----------cccHHHHH-H-HHHhcCCCCCcccchhhHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKD-----LPW----------KLKESRVL-E-ILQAIDCNTDGLVDFSEFVAA 466 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-----~~~----------~~~~~~~~-~-l~~~~d~~~~g~I~~~ef~~~ 466 (562)
..+.-+|..||.|+||-|+.+||..+..-+ +|. .. ..++. . ..--|..+++++++++||+..
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~-~~~~nsaL~~yFFG~rg~~kLs~deF~~F 311 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSF-KVEVNSALLTYFFGKRGNGKLSIDEFLKF 311 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCcccccee-hhhhhhhHHHHhhccCCCccccHHHHHHH
Confidence 567788999999999999999999876211 111 11 11111 1 233467899999999999977
Q ss_pred HhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---------------------------------
Q 008547 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------------------------------- 513 (562)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------------------------------- 513 (562)
+..+.. +.++--|..+|+..+|.|+..+|..++-...
T Consensus 312 ~e~Lq~----------Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~gISl~Ef~~F 381 (489)
T KOG2643|consen 312 QENLQE----------EILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGKGISLQEFKAF 381 (489)
T ss_pred HHHHHH----------HHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCCCcCHHHHHHH
Confidence 654321 2344458888888888888888877652111
Q ss_pred --------------------------------------------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 514 --------------------------------------------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 514 --------------------------------------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.++.+|..+|.|+||.|+++||+.+|++.
T Consensus 382 f~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 382 FRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred HHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHH
Confidence 14667888999999999999999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 562 | ||||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 7e-71 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 8e-70 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 3e-69 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-69 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 3e-69 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 8e-68 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-66 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 5e-64 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 2e-55 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 2e-55 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-54 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-54 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 4e-54 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-53 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-53 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-52 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-52 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 6e-52 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 6e-52 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-51 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 5e-49 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-45 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 7e-44 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 8e-44 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 8e-44 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 8e-44 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 8e-44 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-43 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-43 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 4e-43 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 5e-43 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 6e-43 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 8e-43 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 8e-43 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-42 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-42 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 2e-42 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 3e-42 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 3e-42 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 4e-42 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 4e-42 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 5e-42 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 5e-42 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 6e-42 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 6e-42 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 6e-42 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 6e-42 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 6e-42 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 7e-42 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 8e-42 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 8e-42 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 8e-42 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 9e-42 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 1e-41 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-41 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-41 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 1e-41 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-41 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-41 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 3e-41 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 3e-41 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 3e-41 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-41 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 4e-41 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 5e-41 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 6e-41 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 5e-40 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 7e-40 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 8e-40 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 2e-39 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 9e-39 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 1e-38 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-38 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 5e-38 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 9e-38 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-37 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-37 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 3e-37 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 3e-37 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-37 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 6e-37 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 7e-37 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-36 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-36 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-36 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-36 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-36 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 3e-36 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 4e-36 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-36 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 7e-36 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-36 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 8e-36 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 9e-36 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 3e-35 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 5e-35 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 6e-35 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-34 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-34 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-34 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-34 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 5e-34 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-33 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-33 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 2e-33 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 2e-33 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 2e-33 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-33 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-33 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 4e-33 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 5e-33 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 5e-33 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 5e-33 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 5e-33 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 5e-33 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 6e-33 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 7e-33 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 8e-33 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 8e-33 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 9e-33 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 9e-33 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 9e-33 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 1e-32 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-32 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-32 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-32 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-32 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-32 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-32 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 5e-32 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 6e-32 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 6e-32 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 6e-32 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 6e-32 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-32 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-32 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 9e-32 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 9e-32 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-32 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-31 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 1e-31 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-31 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-31 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-31 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-31 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-31 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-31 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-31 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-31 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-31 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-31 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-31 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-31 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-31 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-31 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 1e-31 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-31 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-31 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-31 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-31 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-31 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-31 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-31 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-31 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-31 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-31 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-31 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-31 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-31 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-31 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-31 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-31 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-31 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-31 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-31 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-31 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-31 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 3e-31 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-31 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-31 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-31 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-31 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-31 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-31 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 4e-31 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-31 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-31 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 4e-31 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-31 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 4e-31 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-31 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 5e-31 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 5e-31 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 5e-31 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 5e-31 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-31 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 6e-31 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 7e-31 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 7e-31 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 7e-31 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 8e-31 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 9e-31 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 9e-31 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 9e-31 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 2e-30 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-30 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-30 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 5e-30 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-29 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 1e-29 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 2e-29 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-29 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-29 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 2e-29 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-29 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-29 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 4e-29 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 4e-29 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 4e-29 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-27 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 2e-27 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 4e-27 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 4e-27 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 8e-27 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 2e-26 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-26 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 6e-26 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 1e-25 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 1e-25 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-25 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-25 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 2e-25 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-25 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 2e-25 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-25 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 7e-25 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 8e-25 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-24 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-24 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-24 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-24 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 1e-24 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 1e-24 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-24 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 1e-24 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 2e-24 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 2e-24 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-24 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-24 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 3e-24 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 3e-24 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 6e-24 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 6e-24 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 6e-24 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 9e-24 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-23 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-23 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-23 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-23 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-23 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-23 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 5e-23 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-23 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 7e-23 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 7e-23 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 7e-23 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 8e-23 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 9e-23 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 9e-23 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 9e-23 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 9e-23 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-22 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 1e-22 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 1e-22 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 1e-22 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-22 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 1e-22 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-22 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-22 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 1e-22 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 1e-22 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 1e-22 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 2e-22 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-22 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-22 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 2e-22 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 2e-22 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-22 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 2e-22 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-22 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-22 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 3e-22 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-22 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 3e-22 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 3e-22 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 3e-22 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-22 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 4e-22 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 4e-22 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 4e-22 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 4e-22 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 4e-22 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 5e-22 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 5e-22 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 5e-22 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 5e-22 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 5e-22 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 5e-22 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 5e-22 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 5e-22 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 6e-22 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 6e-22 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 6e-22 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 7e-22 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 8e-22 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 8e-22 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 8e-22 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 8e-22 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 9e-22 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 9e-22 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 9e-22 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 9e-22 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 9e-22 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 9e-22 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 9e-22 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 9e-22 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 1e-21 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 1e-21 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 1e-21 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 1e-21 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 1e-21 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 1e-21 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 1e-21 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 1e-21 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 1e-21 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 1e-21 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-21 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 2e-21 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 2e-21 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 2e-21 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 2e-21 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 2e-21 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 2e-21 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-21 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 2e-21 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-21 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-21 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 3e-21 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-21 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 3e-21 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 3e-21 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 4e-21 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-21 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 5e-21 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 5e-21 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-21 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-21 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 6e-21 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 8e-21 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 8e-21 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 9e-21 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-20 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 2e-20 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-20 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-20 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 3e-20 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 3e-20 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 3e-20 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 3e-20 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 3e-20 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-20 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 4e-20 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 4e-20 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 5e-20 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 5e-20 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 5e-20 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-20 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-20 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 5e-20 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 5e-20 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 5e-20 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-20 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 6e-20 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 6e-20 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 6e-20 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 7e-20 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 7e-20 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 7e-20 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 7e-20 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 8e-20 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 8e-20 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 8e-20 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 8e-20 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 8e-20 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 8e-20 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 8e-20 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 8e-20 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 8e-20 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 8e-20 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 9e-20 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 9e-20 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 9e-20 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 9e-20 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 9e-20 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 9e-20 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 9e-20 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 9e-20 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 9e-20 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-19 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-19 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-19 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-19 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 1e-19 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 1e-19 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 1e-19 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-19 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 1e-19 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 1e-19 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 1e-19 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-19 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 1e-19 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 1e-19 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-19 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 1e-19 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 1e-19 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 1e-19 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-19 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-19 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 1e-19 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 1e-19 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 1e-19 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 1e-19 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 1e-19 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 1e-19 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-19 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 1e-19 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 1e-19 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 1e-19 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-19 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 1e-19 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-19 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 1e-19 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 1e-19 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 2e-19 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-19 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-19 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-19 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-19 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-19 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 2e-19 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 2e-19 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-19 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 2e-19 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-19 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-19 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-19 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-19 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 2e-19 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 2e-19 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 2e-19 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 2e-19 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 2e-19 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-19 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-19 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 3e-19 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-19 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 4e-19 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 4e-19 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 5e-19 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 5e-19 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 5e-19 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 5e-19 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 5e-19 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 5e-19 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 5e-19 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 5e-19 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 5e-19 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 6e-19 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 6e-19 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 6e-19 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-19 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 6e-19 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-19 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 6e-19 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 6e-19 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-19 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 6e-19 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 6e-19 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-19 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 7e-19 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-19 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 7e-19 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-19 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 7e-19 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-19 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 7e-19 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 7e-19 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 8e-19 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 8e-19 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 8e-19 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 8e-19 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 8e-19 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 8e-19 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 8e-19 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 9e-19 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 9e-19 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 9e-19 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 9e-19 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 9e-19 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 9e-19 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 9e-19 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 9e-19 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 1e-18 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 1e-18 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 1e-18 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 1e-18 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 1e-18 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 1e-18 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-18 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 1e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-18 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-18 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 1e-18 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-18 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-18 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 1e-18 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-18 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 1e-18 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-18 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-18 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 2e-18 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-18 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 2e-18 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 2e-18 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-18 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-18 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 2e-18 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-18 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 2e-18 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 3e-18 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 3e-18 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 3e-18 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-18 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 3e-18 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 4e-18 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 4e-18 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 4e-18 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 4e-18 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 4e-18 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 5e-18 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 5e-18 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 6e-18 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 7e-18 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 7e-18 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 7e-18 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 7e-18 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 7e-18 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 7e-18 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 8e-18 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 8e-18 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 9e-18 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 9e-18 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 1e-17 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-17 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-17 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-17 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-17 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 1e-17 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-17 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 1e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 1e-17 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 1e-17 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 1e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-17 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-17 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-17 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 3e-17 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 3e-17 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-17 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-17 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-17 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 5e-17 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 5e-17 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 5e-17 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-17 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 6e-17 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-17 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-17 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 8e-17 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-17 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 9e-17 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 9e-17 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-16 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-16 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-16 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 2e-16 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-16 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 3e-16 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 3e-16 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 4e-16 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 4e-16 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-16 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-16 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 8e-16 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 9e-16 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 9e-16 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 1e-15 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 1e-15 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 1e-15 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 1e-15 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 1e-15 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 1e-15 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 1e-15 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 2e-15 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-15 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 2e-15 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-15 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 3e-15 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 3e-15 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-15 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 3e-15 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 4e-15 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 5e-15 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 6e-15 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 8e-15 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 8e-15 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 1e-14 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-14 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-14 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-14 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 1e-14 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-14 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-14 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 1e-14 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-14 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-14 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-14 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-14 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-14 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-14 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-14 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-14 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-14 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-14 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 2e-14 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-14 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 2e-14 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-14 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-14 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-14 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-14 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-14 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-14 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 4e-14 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 5e-14 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 5e-14 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-14 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 6e-14 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-14 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 7e-14 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 8e-14 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 8e-14 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 8e-14 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-14 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-14 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 9e-14 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 9e-14 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-13 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 2e-13 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-13 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-13 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 3e-13 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 4e-13 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 4e-13 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 4e-13 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 4e-13 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 6e-13 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 7e-13 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 7e-13 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 7e-13 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 8e-13 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 8e-13 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-13 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 1e-12 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 1e-12 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-12 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 1e-12 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 1e-12 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 1e-12 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 1e-12 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-12 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-12 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-12 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 1e-12 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 1e-12 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 1e-12 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-12 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-12 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 2e-12 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 2e-12 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 2e-12 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 2e-12 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 2e-12 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 2e-12 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-12 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 2e-12 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-12 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 2e-12 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 2e-12 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 2e-12 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 2e-12 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 3e-12 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 3e-12 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 3e-12 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 3e-12 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 3e-12 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 3e-12 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 3e-12 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 3e-12 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 4e-12 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 4e-12 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 4e-12 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 4e-12 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 4e-12 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 4e-12 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 4e-12 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 4e-12 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 4e-12 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-12 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-12 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 5e-12 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 5e-12 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 6e-12 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 6e-12 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-12 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 6e-12 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-12 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 6e-12 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 7e-12 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 7e-12 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 7e-12 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 7e-12 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 7e-12 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 8e-12 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 8e-12 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 9e-12 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 9e-12 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 1e-11 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-11 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-11 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-11 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-11 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 1e-11 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-11 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 2e-11 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 2e-11 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-11 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-11 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-11 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-11 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 2e-11 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 3e-11 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-11 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-11 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-11 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-11 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-11 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 3e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-11 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 3e-11 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 3e-11 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-11 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 3e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-11 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-11 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 4e-11 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 4e-11 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 4e-11 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 4e-11 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-11 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 4e-11 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 4e-11 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-11 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-11 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-11 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 5e-11 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 5e-11 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 5e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 5e-11 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 5e-11 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 5e-11 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 5e-11 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 5e-11 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-11 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 6e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 6e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 6e-11 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-11 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 6e-11 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 6e-11 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 7e-11 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 7e-11 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 7e-11 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-11 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 8e-11 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 8e-11 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 8e-11 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-11 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 9e-11 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-11 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-11 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 9e-11 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 9e-11 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-10 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-10 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-10 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-10 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-10 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-10 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-10 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-10 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-10 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-10 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 1e-10 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-10 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-10 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 2e-10 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 2e-10 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 2e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-10 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 2e-10 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-10 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-10 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 2e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-10 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-10 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 2e-10 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 2e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-10 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-10 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-10 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-10 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 2e-10 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-10 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-10 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-10 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-10 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 3e-10 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-10 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 3e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-10 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-10 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-10 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 3e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-10 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 3e-10 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 3e-10 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 4e-10 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 4e-10 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 4e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-10 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-10 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-10 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 4e-10 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-10 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 4e-10 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-10 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 4e-10 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-10 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 5e-10 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 5e-10 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 5e-10 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 6e-10 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 6e-10 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-10 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 6e-10 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 7e-10 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 8e-10 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 8e-10 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 8e-10 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-10 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 9e-10 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 9e-10 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 9e-10 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-09 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-09 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 1e-09 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-09 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-09 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 1e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-09 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 1e-09 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-09 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-09 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-09 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-09 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 3e-09 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-09 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 3e-09 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-09 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 3e-09 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-09 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-09 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-09 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 3e-09 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 4e-09 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-09 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 4e-09 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 4e-09 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-09 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-09 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-09 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 5e-09 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 5e-09 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 5e-09 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 5e-09 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 5e-09 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 5e-09 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-09 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 6e-09 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 6e-09 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 7e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 8e-09 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 8e-09 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 8e-09 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 8e-09 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 8e-09 | ||
| 2c47_A | 313 | Structure Of Casein Kinase 1 Gamma 2 Length = 313 | 9e-09 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 1e-08 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 1e-08 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 1e-08 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 1e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-08 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-08 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 1e-08 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 2e-08 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-08 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-08 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-08 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 2e-08 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-08 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 3e-08 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 3e-08 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-08 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-08 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-08 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 3e-08 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 4e-08 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 4e-08 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-08 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 4e-08 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-08 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-08 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-08 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-08 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-08 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 4e-08 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 4e-08 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-08 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-08 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 5e-08 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 6e-08 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 6e-08 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 6e-08 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-08 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-08 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 7e-08 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-08 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 8e-08 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 8e-08 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 1e-07 |
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 614 bits (1585), Expect = 0.0
Identities = 160/487 (32%), Positives = 246/487 (50%), Gaps = 34/487 (6%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +K R++E D
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHD 122
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
AA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS + K +D
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V K F
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EGGDASEIPIDISVLNN 376
W +IS+ AKD ++K+L P R+TA Q L HPW++ E S++P S + N
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTN 302
Query: 377 MRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 435
+RQF +L Q AL +AS L +E L + F +D + +G + +E+ + + +
Sbjct: 303 IRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMR 362
Query: 436 WK-------------LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482
K E ++ ++ +D + G +++SEF+A+ + L +
Sbjct: 363 LKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRE----- 417
Query: 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFR 536
R + AF+ FD D G I+ +EL S ++ ++E+ D +KDG + +EF
Sbjct: 418 -RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Query: 537 RLLRTAS 543
+L+
Sbjct: 477 EMLQNFV 483
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 608 bits (1569), Expect = 0.0
Identities = 159/521 (30%), Positives = 251/521 (48%), Gaps = 48/521 (9%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H H H +N + R++ G Y + LG G
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEG--------------KIGESYFKVRKLGSG 47
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIA----------VEDVKREVKILQALAGHE 157
+G + +K A+K I+K++ E++ E+ +L++L H
Sbjct: 48 AYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHP 106
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N++K ++ FED Y Y+ E EGGEL ++I+ + ++ E DAA +++Q+L H
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHK 164
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
H +VHRD+KPEN L ++ ++K DFGLS F K +D +G+AYY+APEVLK+K
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKY 224
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
+ DVWS GVI YILLCG PF + + I K+V + K F W +IS+ AK+ +K
Sbjct: 225 NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKL 284
Query: 338 LLVKDPRARLTAAQALSHPWVREG---GDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 394
+L D R TA +AL+ W+++ + S+ L+NMR+F +L Q A+ +
Sbjct: 285 MLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFI 344
Query: 395 ASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEI 446
S L EE +L D F +D + +G + +E+ + K E V I
Sbjct: 345 GSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNI 404
Query: 447 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 506
L+ +D + +G +++SEF++ + L R + AF FD D+ G IT EEL
Sbjct: 405 LKEVDFDKNGYIEYSEFISVCMDKQILF------SEERLRRAFNLFDTDKSGKITKEELA 458
Query: 507 MHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543
GL + + +L EAD +KD I EF ++
Sbjct: 459 NLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 604 bits (1559), Expect = 0.0
Identities = 168/516 (32%), Positives = 259/516 (50%), Gaps = 40/516 (7%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGH 106
H H H R Y Q + + G Y K LG
Sbjct: 2 HHHHHHSSGRENLYFQGDLQATPGMFITSKKG--------------HLSEMYQRVKKLGS 47
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G +G + DK A+K I K + + + EV +L+ L H N++K Y+ F
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLYDFF 105
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
ED Y+ ME +GGEL D I+ + ++ E DAAV+++Q+L H H +VHRD+K
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSI 286
PEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+APEVL++K + DVWSI
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSI 223
Query: 287 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 346
GVI +ILL G PF +T+ I ++V + K F W ++S AKD +K++L D + R
Sbjct: 224 GVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR 283
Query: 347 LTAAQALSHPWVREGGDASE----IPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDE 401
++A QAL HPW++E E +P + + NMR+F +L Q AL +AS L E
Sbjct: 284 ISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQE 343
Query: 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEILQAIDCNT 454
E +L D F ID + +G + +E+ +K ES V IL A D +
Sbjct: 344 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 403
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 513
+G +D+SEFV + L D + ++AF+KFD D +G I+ +EL GL
Sbjct: 404 NGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGKISVDELASVFGLDHL 457
Query: 514 ---SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 546
+ ++ D + DG + EF ++++ ++
Sbjct: 458 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNN 493
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 603 bits (1557), Expect = 0.0
Identities = 158/467 (33%), Positives = 243/467 (52%), Gaps = 27/467 (5%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 82 QL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSG 138
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APE
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 272 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
VL + DVWS GVI YILL G PF E I K+V + K F W +S SA
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVR---EGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
KD ++K+L P R++A AL H W++ + + ++P + + N+RQF +L Q
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQ 318
Query: 389 FALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----------K 437
AL + S L +E +L F +D + +G + E+ + + +
Sbjct: 319 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
E V ++L A+D + +G +++SEFV + L + R + AF FD D
Sbjct: 379 AVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------RLERAFRMFDSDNS 432
Query: 498 GFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540
G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 433 GKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 546 bits (1410), Expect = 0.0
Identities = 108/453 (23%), Positives = 196/453 (43%), Gaps = 27/453 (5%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F Y + + LG G F G A I K+ + ++RE +I +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICR 65
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 66 LL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEA 122
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAP 270
CH G+VHR++KPEN L S + +++K DFGL+ ++ + + G+ Y++P
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 182
Query: 271 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
EVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF 389
AKD + K+L +P R+TAA+AL HPW+ + ++ +++F +LK
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 302
Query: 390 ALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 447
L + +T + ++ I+ NG K+ + +
Sbjct: 303 ILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDFESYT-----------KMCDPGMTAFE 351
Query: 448 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 507
N +DF F L + + D I +
Sbjct: 352 PEALGNLVEGLDFHRFYFENLWSRNSKPVHTTIL-----NPHIHLMGDESACIAYIRITQ 406
Query: 508 H---TGLKGSIDPLLEEADIDKDGRISLSEFRR 537
+ G+ + +DG+ + F R
Sbjct: 407 YLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHR 439
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 471 bits (1213), Expect = e-164
Identities = 98/332 (29%), Positives = 171/332 (51%), Gaps = 8/332 (2%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS--RYTEKDAAVVVR 206
I L H ++V+ + D +Y+ E +G +L I+ + D+ Y+E A+ +R
Sbjct: 79 ICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 265
Q+L CH + ++HRD+KP L S + + +K FG++ + G VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+ +++ K + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 384
IS SAKD V+++L+ DP R+T +AL+HPW++E + + +R+F
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 385 RLKQFALRALASTLDDEELADLRDQFDAIDVD 416
+LK L A++S + D ++ D
Sbjct: 317 KLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 467 bits (1205), Expect = e-163
Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 10/356 (2%)
Query: 72 NSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
+ TG G+ ++F + F Y + + LG G F K G A K I
Sbjct: 3 HMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII 62
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
K+ + ++RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+
Sbjct: 63 NTKKLS-ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 120
Query: 190 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
A++ Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+
Sbjct: 121 ARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Query: 250 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
+ + + G+ Y++PEVLK+ D+W+ GVI YILL G PFWD+ + +
Sbjct: 179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 238
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
+ ++ D+ W +++ AK + +L +P+ R+TA QAL PW+ +
Sbjct: 239 YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAI 298
Query: 369 IDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLE 424
++ +++F +LK L + +T L++L S E
Sbjct: 299 HRQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQGPPSTIKE 351
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 447 bits (1151), Expect = e-156
Identities = 111/280 (39%), Positives = 154/280 (55%), Gaps = 4/280 (1%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +K R++E D
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHD 122
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
AA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS + K +D
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V K F
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 446 bits (1149), Expect = e-155
Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 12/319 (3%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ +Y I + LG G+FG + + ++ K ++ VK+E+ IL
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILN 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H N++ + +FE + + E G ++ +RI E++ V Q+
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEA 114
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H H + H D++PEN ++++ + S++K +FG + +KPG F+ + + Y APE
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V + +D+WS+G + Y+LL G PF +T I + ++ + F + + IS
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE 233
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA 390
A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+ ++ Y L +
Sbjct: 234 AMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKD 289
Query: 391 LRALASTLDDEELADLRDQ 409
L + S +R Q
Sbjct: 290 LNMVVSAARISCGGAIRSQ 308
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-154
Identities = 107/277 (38%), Positives = 163/277 (58%), Gaps = 6/277 (2%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++ YT+ +G G +G +A K R A KKI K + V+ K+E++I+++
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKS 62
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ + E DAA +++ +L
Sbjct: 63 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAV 119
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
A CH + HRD+KPENFLF + DS LK DFGL+ KPGK + VG+ YYV+P+V
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
Query: 273 LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
L+ GPE D WS GV+ Y+LLCG PF T+ + ++ F K W ++S A+
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+++LL K P+ R+T+ QAL H W + +S +
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-154
Identities = 92/283 (32%), Positives = 159/283 (56%), Gaps = 6/283 (2%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + D + + LG G FG ++ ++++G +K I K++ + +
Sbjct: 7 HSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPM 64
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTE 198
E ++ E+++L++L H N++K + FED + +YI ME CEGGELL+RI++ + +E
Sbjct: 65 EQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
A +++QM+ A H +VH+D+KPEN LF+ S +K DFGL++ K +
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 259 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
+ G+A Y+APEV KR + D+WS GV+ Y LL G PF + + + ++ +P+
Sbjct: 184 TNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ + P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 244 YAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-153
Identities = 116/355 (32%), Positives = 175/355 (49%), Gaps = 14/355 (3%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLL 104
H H H + L + + G + + L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESEL 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN 164
G G Y K A+K ++K + V+ E+ +L L+ H N++K
Sbjct: 62 GRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKE 115
Query: 165 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
FE + + +EL GGEL DRI+ K Y+E+DAA V+Q+L A H +G+VHRD
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDV 283
+KPEN L+ + D+ LK DFGLS ++ + + G+ Y APE+L+ + GPE D+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233
Query: 284 WSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 342
WS+G+ITYILLCG PF+D+ D +F+ +L + F W +S +AKD V+KL+V D
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 343 PRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 397
P+ RLT QAL HPWV G A+ + +++F +LK +AS+
Sbjct: 294 PKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 439 bits (1132), Expect = e-151
Identities = 89/384 (23%), Positives = 160/384 (41%), Gaps = 18/384 (4%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N ++ + +Q + D
Sbjct: 4 NSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDY 63
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
++LG G G +K ++ A+K ++ +REV++ +
Sbjct: 64 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCP 115
Query: 158 NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
++V+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSIS 328
+ D+WS+GVI YILLCG PF+ G+ + + +F W +S
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
K ++ LL +P R+T + ++HPW+ + + P+ S + + ++ +K+
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE-RWEDVKE 354
Query: 389 FALRALASTLDDEELADLRDQFDA 412
ALA+ D E ++ DA
Sbjct: 355 EMTSALATMRVDYEQIKIKKIEDA 378
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-150
Identities = 99/365 (27%), Positives = 170/365 (46%), Gaps = 17/365 (4%)
Query: 6 STTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKT 65
SG ++ N R R A + Q ++L
Sbjct: 4 HHHHSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLND 63
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
Q + T + + P + D+ K+F ++Y ++G G +A G A
Sbjct: 64 AQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFA 123
Query: 126 VKKIEKNKMILPI-----AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
VK +E L E +RE IL+ +AGH +++ +++E +++++ +L
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
GEL D + K +EK+ ++R +L + H + +VHRD+KPEN L ++
Sbjct: 184 KGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQ 238
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYIL 293
++ +DFG S ++PG+K +++ G+ Y+APE+LK G E D+W+ GVI + L
Sbjct: 239 IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 294 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
L G PFW + + + + ++ + F W S++ KD + +LL DP ARLTA QAL
Sbjct: 299 LAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358
Query: 354 SHPWV 358
HP+
Sbjct: 359 QHPFF 363
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 430 bits (1107), Expect = e-149
Identities = 107/333 (32%), Positives = 171/333 (51%), Gaps = 18/333 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
IL+ + H NV+ + +E+ V + +EL GGEL D + K+ TE++A ++Q
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQ 122
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKKFQDIVGSAY 266
+L H + H D+KPEN + +K DFGL+ I G +F++I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
+VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSR 385
+ S AKDF+++LLVKDP+ R+T +L HPW++ L+ V +
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ-------QALSRKASAVNMEK 295
Query: 386 LKQFALRALASTLDDEELADLRDQFDAIDVDKN 418
K+FA R ++ L D F+A ++ +
Sbjct: 296 FKKFAARKKSNNG---SGGGLNDIFEAQKIEWH 325
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 427 bits (1099), Expect = e-148
Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 4/302 (1%)
Query: 92 KDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
++F+ Y + K LG G+F K+ G A K ++K + ++ E+ +L
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVL 82
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ V+ + +E+ + + + +E GGE+ L + +E D +++Q+L
Sbjct: 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H + +VH D+KP+N L S +K DFG+S I + ++I+G+ Y+AP
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 271 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
E+L +D+W+IG+I Y+LL PF + + + + D+ + + S+S
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI-PIDISVLNNMRQFVKYSRLKQ 388
A DF++ LLVK+P R TA LSH W+++ + P + S + + S +
Sbjct: 263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDK 322
Query: 389 FA 390
+
Sbjct: 323 TS 324
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 421 bits (1086), Expect = e-146
Identities = 90/284 (31%), Positives = 154/284 (54%), Gaps = 6/284 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F Y + + LG G F K G A K I K+ + ++RE +I +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICR 60
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILES 117
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
A CH +G+VHR++KPEN L S + +++K DFGL+ + + + G+ Y++PE
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 177
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
VLK+ D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISV 373
AK + +L +P+ R+TA QAL PW+ AS I +V
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV 281
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-144
Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)
Query: 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
Y + K +LG G G + G + A+K + + ++EV
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHW 76
Query: 152 ALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+G ++V + +E+ + I ME EGGEL RI + D +TE++AA ++R
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+ H H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YY
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYY 195
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRK 322
VAPEVL + D+WS+GVI YILLCG PF+ T G+ + + + F
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFV 381
W +S AK ++ LL DP RLT Q ++HPW+ + + P+ + VL +
Sbjct: 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHW 315
Query: 382 KYSRLKQFALRALAS-TLDDEEL 403
+K+ ALA+ +D +++
Sbjct: 316 D--EVKEEMTSALATMRVDYDQV 336
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-142
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 23/304 (7%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
+P T F Y ++LG G K AVK I+
Sbjct: 4 AALPGSHST-----HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58
Query: 138 IAV------EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK 191
A E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 192 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+EK+ ++R +L V H +VHRD+KPEN L +D ++K TDFG S
Sbjct: 119 V--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQ 173
Query: 252 IKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKT 304
+ PG+K +++ G+ Y+APE+++ G E D+WS GVI Y LL G PFW +
Sbjct: 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 364
+ + + ++ F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE 293
Query: 365 SEIP 368
Sbjct: 294 EVRH 297
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 416 bits (1071), Expect = e-140
Identities = 104/418 (24%), Positives = 178/418 (42%), Gaps = 15/418 (3%)
Query: 42 RNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG 101
D + + + + K ++ + Y I
Sbjct: 103 PGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIH 162
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG G FG + T++A G+ A K + E V++E++ + L H +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLR-HPTLVN 218
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++AFEDDN + + E GGEL +++ + + +E +A +RQ+ + H + V
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
H D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV + K G
Sbjct: 278 HLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
+D+WS+GV++YILL G PF + +D + V + + IS KDF++KLL+
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLL 396
Query: 341 KDPRARLTAAQALSHPWVREG-GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLD 399
DP R+T QAL HPW+ G + I S +R +K L
Sbjct: 397 ADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIK--TKYDAWPEPLPPL-- 452
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDG 456
+++ + + + + +A + + K + V E A C
Sbjct: 453 -GRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIV-KPYGTEVGEGQSANFYCRVIA 508
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 405 bits (1044), Expect = e-139
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 30/324 (9%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D F + Y + K LG G F K + AVK I K + ++E+
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEI 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ GH N+VK + F D + ++ MEL GGEL +RI KK ++E +A+ ++R+
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK--HFSETEASYIMRK 114
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAY 266
++ + H G+VHRD+KPEN LF ++ +K DFG + P + + + +
Sbjct: 115 LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-------GIFKEVLRNKPD 318
Y APE+L + D+WS+GVI Y +L G+ PF I K++ +
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS 234
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI--------- 369
F + W ++S AKD ++ LL DP RL + + W+++G S P+
Sbjct: 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSS 294
Query: 370 DISVLNNMR-QFVKYSRLKQFALR 392
+V ++ F +++ K+
Sbjct: 295 GAAVHTCVKATFHAFNKYKREGFC 318
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 404 bits (1040), Expect = e-138
Identities = 106/354 (29%), Positives = 175/354 (49%), Gaps = 12/354 (3%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
+ + Y IG+ LG GQF +K+ G A K I+K + + E+++REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
IL+ + H N++ ++ +E+ V + +EL GGEL D + K+ +E++A ++Q
Sbjct: 67 SILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKKFQDIVGSAY 266
+L H + H D+KPEN + +K DFGL+ I+ G +F++I G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--PIDISVLNNMRQFVKY 383
S AKDF++KLLVK+ R RLT +AL HPW+ + + L N ++
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVR 303
Query: 384 SRLKQ-FALRALASTLDDEELA-DLRDQFDAIDVDKNGSISLEEMRQALAKDLP 435
R K F++ +L + L + + + ++ + R+AL
Sbjct: 304 RRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHPRRR 357
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 400 bits (1029), Expect = e-138
Identities = 96/283 (33%), Positives = 155/283 (54%), Gaps = 8/283 (2%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREVKI 149
+ Y +G+ LG GQF K G A K I+K ++ ++ E+++REV I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
L+ + H N++ ++ FE+ V + +EL GGEL D + K+ TE +A ++Q+L
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQIL 118
Query: 210 RVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
H + H D+KPEN + + +K DFG++ I+ G +F++I G+ +V
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
APE++ + G E+D+WSIGVITYILL G PF +T+ + DF + + +
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 370
S AKDF+++LLVKDP+ R+T AQ+L H W++ + D
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGED 281
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 398 bits (1026), Expect = e-137
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D ++LG G G +K ++ A+K ++ +REV++
Sbjct: 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELH 64
Query: 151 QALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ ++V+ + +E+ + I ME +GGEL RI + D +TE++A+ +++
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ H + HRD+KPEN L+ S + ++ LK TDFG
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------------ 166
Query: 267 YVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRK 322
A E K D+WS+GVI YILLCG PF+ G+ + + +F
Sbjct: 167 --AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382
W +S K ++ LL +P R+T + ++HPW+ + + P+ S + + +
Sbjct: 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE-R 283
Query: 383 YSRLKQFALRALAS 396
+ +K+ ALA+
Sbjct: 284 WEDVKEEMTSALAT 297
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 401 bits (1031), Expect = e-136
Identities = 106/376 (28%), Positives = 167/376 (44%), Gaps = 12/376 (3%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP-CGKRTDFGYDKDFDRRYTIGKLLGH 106
+ H H + + + + Y I + LG
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G FG + +KA G K I P+ VK E+ I+ L H ++ ++AF
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAF 117
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
ED + + +E GGEL DRI A+ D + +E + +RQ H H +VH D+K
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWS 285
PEN + ++ K+ SS+K DFGL+ + P + + +A + APE++ R+ G +D+W+
Sbjct: 177 PENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 286 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 345
IGV+ Y+LL G PF + + + V R +F + S+S AKDF+K LL K+PR
Sbjct: 236 IGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK 295
Query: 346 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF----ALRALASTLDDE 401
RLT AL HPW++ I S N +RQ +K A+ +A+
Sbjct: 296 RLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLR 355
Query: 402 ELADLRDQFDAIDVDK 417
+ Q D+
Sbjct: 356 KHRPQEYQIYDSYFDR 371
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-136
Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 11/314 (3%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
+ + Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
IL+ + H NV+ ++ +E+ V + +EL GGEL D + K+ +E++A ++Q
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKKFQDIVGSAY 266
+L H + H D+KPEN + +K DFGL+ I+ G +F++I G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
+VAPE++ + G E+D+WSIGVITYILL G PF T+ + DF + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--PIDISVLNNMRQFVKY 383
S AKDF++KLLVK+ R RLT +AL HPW+ + + + L N R+
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVR 303
Query: 384 SRLKQFALRALAST 397
R K + ++
Sbjct: 304 RRWKL-SFSIVSLC 316
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 393 bits (1013), Expect = e-135
Identities = 101/311 (32%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 90 YDKDFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
+ F+ Y + + +LG G + AVK IEK V REV+
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVE 62
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
+L GH NV++ FE+++ Y+ E GG +L I ++ + E +A+VVV+ +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDV 120
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI------- 261
H G+ HRD+KPEN L + + S +K DF L IK I
Sbjct: 121 ASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 262 -VGSAYYVAPEVLKRKS------GPESDVWSIGVITYILLCGRRPFWDK----------- 303
GSA Y+APEV++ S D+WS+GVI YILL G PF +
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240
Query: 304 ----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
++ +F+ + K +F K W IS +AKD + KLLV+D + RL+AAQ L HPWV+
Sbjct: 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
Query: 360 EGGDASEIPID 370
G A E +
Sbjct: 301 --GCAPENTLP 309
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-135
Identities = 102/376 (27%), Positives = 179/376 (47%), Gaps = 19/376 (5%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGV 79
++ +HH + + + +N + H E + + + S+R + +
Sbjct: 3 HHHHHHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSAL 62
Query: 80 I--------PCGKRTDFGYDKDFDRRYTIGKL--LGHGQFGYTYVATDKANGDRVAVKKI 129
P R + YT+ K LG G+FG + + A G ++A K I
Sbjct: 63 AVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII 122
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
+ M E+VK E+ ++ L H N+++ Y+AFE N + + ME +GGEL DRI+
Sbjct: 123 KTRGMKD---KEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII 178
Query: 190 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
+ TE D + ++Q+ H ++H D+KPEN L + ++ +K DFGL+
Sbjct: 179 DE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLA 236
Query: 250 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
KP +K + G+ ++APEV+ +D+WS+GVI Y+LL G PF +
Sbjct: 237 RRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET 296
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
+L + D + + IS AK+F+ KLL+K+ R++A++AL HPW+ + S +
Sbjct: 297 LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLS 356
Query: 369 IDI--SVLNNMRQFVK 382
+ ++ + FV
Sbjct: 357 AQKKKNRGSDAQDFVT 372
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 388 bits (998), Expect = e-132
Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 21/320 (6%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEIL 69
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N++ + ++D YVY+ EL +GGELLD+IL +K ++E++A+ V+ + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITK 127
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKED-SSLKATDFGLSDFIKP-GKKFQDIVGSAYYV 268
H G+VHRD+KP N L+ + S++ DFG + ++ +A +V
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRNKPDFRRKPW 324
APEVL+R+ D+WS+GV+ Y +L G PF D T + I + K W
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ----- 379
S+S++AKD V K+L DP RLTAA L HPW+ + ++ ++ +
Sbjct: 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAA 307
Query: 380 -FVKYSRLKQFALRALASTL 398
+ +R + L + +
Sbjct: 308 TYSALNRNQSPVLEPVGRST 327
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 385 bits (991), Expect = e-131
Identities = 106/323 (32%), Positives = 162/323 (50%), Gaps = 20/323 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 119
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 265 AYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 379
+ W +S A D VKKLLV DP+AR T +AL HPW+++ + + + +
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE------DMKRKFQDLLSE 293
Query: 380 FVKYSRLKQFALRALASTLDDEE 402
+ + L Q + S E
Sbjct: 294 ENESTALPQVLAQPSTSRKRPRE 316
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 374 bits (961), Expect = e-126
Identities = 97/347 (27%), Positives = 148/347 (42%), Gaps = 56/347 (16%)
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK 127
H +S R+ G + ++Y + +G G +G VA + A+K
Sbjct: 4 HHHHSSGRENLYFQGGSL------LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIK 57
Query: 128 KIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 185
+ KNK+ P VE +K EV++++ L H N+ + Y +ED+ Y+ + MELC GG LL
Sbjct: 58 IMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLL 116
Query: 186 DRILAKK--------------------------------------DSRYTEKDAAVVVRQ 207
D++ D EK + ++RQ
Sbjct: 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIV 262
+ H G+ HRD+KPENFLF + + +K DFGLS
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235
Query: 263 GSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319
G+ Y+VAPEVL GP+ D WS GV+ ++LL G PF + +VL K F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366
+ +S A+D + LL ++ R A +AL HPW+ + D
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 364 bits (935), Expect = e-121
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 14/288 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + +V+
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 189 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 244
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 265 AYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
+ W +S A D VKKLLV DP+AR T +AL HPW+++ +
Sbjct: 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 412
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 349 bits (898), Expect = e-116
Identities = 87/427 (20%), Positives = 160/427 (37%), Gaps = 37/427 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +LGHG G T V + VAVK+I REV++L+ H
Sbjct: 25 SFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEH 77
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
NV++++ +D + YIA+ELC L + + +KD + + +++Q A H
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE-QKDFAHLGLEPITLLQQTTSGLAHLH 135
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KFQDIVGSAYYVAP 270
+VHRD+KP N L +KA +DFGL + G+ + + G+ ++AP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 271 EVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
E+L D++S G + Y ++ + K+ +L P
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH 255
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRL 386
A++ ++K++ DP+ R +A L HP+ + D+S ++ L
Sbjct: 256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVS------DRIEKESL 309
Query: 387 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR---- 442
++ L D R+ + +DL ++ +
Sbjct: 310 DGPIVKQLERGGRAVVKMDWRENITVPLQTDLR--KFRTYKGGSVRDLLRAMRNKKHHYR 367
Query: 443 --VLEILQAIDCNTDGLVDF--SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDG 498
E+ + + D V + S F H ++ E Q + +
Sbjct: 368 ELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL--CSHERLFQPYYFHEPPEPQP 425
Query: 499 FITPEEL 505
+TP+ L
Sbjct: 426 PVTPDAL 432
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 320 bits (822), Expect = e-104
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 40/314 (12%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+++ K+LG+G G T V G VAVK++ + + E+K+
Sbjct: 9 FEQSLKNLVVSEKILGYGSSG-TVVFQGSFQGRPVAVKRMLIDFC------DIALMEIKL 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS-----RYTEKDAAVV 204
L H NV+++Y + D ++YIA+ELC L D + +K S E + +
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------EDSSLKATDFGLSDFIKP 254
+RQ+ A H ++HRD+KP+N L ++ E+ + +DFGL +
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 255 GK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIGVITYILLC-GRRPF 300
G+ + G++ + APE+L KR+ D++S+G + Y +L G+ PF
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 301 WDK--TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
DK E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 241 GDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
Query: 359 REGGDASEIPIDIS 372
E + +S
Sbjct: 300 WPKSKKLEFLLKVS 313
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 264 bits (678), Expect = 6e-85
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 14/283 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D RRY G+ LG G F + +D + A K + K+ ++ P E + E+ I
Sbjct: 9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
++LA H++VV F+ FED+++V++ +ELC LL+ +K TE +A +RQ++
Sbjct: 69 HRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIV 125
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYV 268
H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+ Y+
Sbjct: 126 LGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS- 326
APEVL +K E DVWSIG I Y LL G+ PF + + +N ++ P
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYS---IPKH 237
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 238 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 266 bits (681), Expect = 8e-85
Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 14/309 (4%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K P + + D RRY G+ LG G F + +D +
Sbjct: 9 KAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEV 68
Query: 124 VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183
A K + K+ ++ P E + E+ I ++LA H++VV F+ FED+++V++ +ELC
Sbjct: 69 FAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 184 LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243
LL+ +K TE +A +RQ++ H + ++HRD+K N ED +K
Sbjct: 128 LLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKI 182
Query: 244 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 301
DFGL+ ++ G++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF
Sbjct: 183 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
Query: 302 DKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ + +N ++ P I+ A ++K+L DP AR T + L+ +
Sbjct: 243 TSCLKETYLRIKKN--EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
Query: 361 GGDASEIPI 369
G + +PI
Sbjct: 298 GYIPARLPI 306
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 263 bits (673), Expect = 8e-84
Identities = 64/304 (21%), Positives = 111/304 (36%), Gaps = 41/304 (13%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ + + +LG G + K GD A+K + P V+ RE ++L+
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLK 62
Query: 152 ALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQM 208
L H+N+VK + E+ + + ME C G L + E + +V+R +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+ +G+VHR++KP N + + S K TDFG + ++ ++F + G+ Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181
Query: 268 VAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--- 315
+ P++ +R G D+WSIGV Y G PF KEV+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241
Query: 316 ------------------KPDFRRKPWPSISNSAKD----FVKKLLVKDPRARLTAAQAL 353
S+S + + +L D Q
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301
Query: 354 SHPW 357
+
Sbjct: 302 AETS 305
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 262 bits (671), Expect = 1e-83
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 30/306 (9%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK 131
+ +GV + F R Y+I K +G G + ++ A+K +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNL 62
Query: 132 NKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA 190
+ ++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L +
Sbjct: 63 EEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-- 118
Query: 191 KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250
KK + + ML H HG+VH D+KP NFL D LK DFG+++
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN 174
Query: 251 FIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYILLC 295
++P VG+ Y+ PE +K S P+SDVWS+G I Y +
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 296 GRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
G+ PF + + P+ + +D +K L +DP+ R++ + L
Sbjct: 235 GKTPFQQIINQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Query: 354 SHPWVR 359
+HP+V+
Sbjct: 292 AHPYVQ 297
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 1e-82
Identities = 91/267 (34%), Positives = 140/267 (52%), Gaps = 11/267 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +G LLG G F Y A G VA+K I+K M V+ V+ EVKI L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-H 70
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
++++ YN FED NYVY+ +E+C GE+ L + ++E +A + Q++ H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRY-LKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR 275
HG++HRD+ N L +K DFGL+ +K P +K + G+ Y++PE+ R
Sbjct: 130 SHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+ G ESDVWS+G + Y LL GR PF T +V+ D+ + +S AKD
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAKDL 242
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREG 361
+ +LL ++P RL+ + L HP++
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFMSRN 269
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 9e-82
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 37/339 (10%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R Y+I K +G G + ++ A+K + + ++ + E+ L L
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQ 65
Query: 155 GH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H + +++ Y+ D Y+Y+ ME C +L + KK + + ML
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVH 122
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAP 270
H HG+VH D+KP NFL D LK DFG+++ ++P VG+ Y+ P
Sbjct: 123 TIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 271 EVLKRKS------------GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 316
E +K S P+SDVWS+G I Y + G+ PF + +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII---D 235
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS---- 372
P+ + +D +K L +DP+ R++ + L+HP+V+ +
Sbjct: 236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM 295
Query: 373 --VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 409
VL + + + + A + L E +
Sbjct: 296 KYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 333
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 255 bits (654), Expect = 4e-81
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 43/299 (14%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ + +LG G FG A + + A+KKI + + + EV +L +L
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASL 59
Query: 154 AGHENVVKFYNAFEDDN-------------YVYIAMELCEGGELLDRILAKKDSRYTEKD 200
H+ VV++Y A+ + ++I ME CE G L D I ++ ++D
Sbjct: 60 N-HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRD 116
Query: 201 -AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---------- 249
+ RQ+L + H G++HRD+KP N E ++K DFGL+
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDIL 173
Query: 250 -----DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD 302
+ +G+A YVA EVL + D++S+G+I + ++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTG 231
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
I K++ +F + K ++ L+ DP R A L+ W+
Sbjct: 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 257 bits (657), Expect = 1e-80
Identities = 85/407 (20%), Positives = 146/407 (35%), Gaps = 49/407 (12%)
Query: 25 HRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK 84
H + + + K + QH + K N
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVK------ 54
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R Y+I K +G G + ++ A+K + + ++ +
Sbjct: 55 ----------GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYR 102
Query: 145 REVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 203
E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK +
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPWERKS 159
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--- 260
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 261 IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
VG+ Y+ PE +K S P+SDVWS+G I Y + G+ PF I
Sbjct: 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-I 274
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
K P+ + +D +K L +DP+ R++ + L+HP+V+
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334
Query: 369 IDIS------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 409
+ VL + + + + A + L E +
Sbjct: 335 AKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 380
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 5e-79
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I L H
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-H 68
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 126
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
++HRD+KPEN L LK DFG S P + D+ G+ Y+ PE+++ +
Sbjct: 127 SKRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGR 182
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
+ D+WS+GV+ Y L G+ PF T +K + R + F P ++ A+D +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLI 238
Query: 336 KKLLVKDPRARLTAAQALSHPWVREG 361
+LL +P R + L HPW+
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN 264
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 1e-77
Identities = 64/304 (21%), Positives = 111/304 (36%), Gaps = 41/304 (13%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ + + +LG G + K GD A+K + P V+ RE ++L+
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLK 62
Query: 152 ALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQM 208
L H+N+VK + E+ + + ME C G L + E + +V+R +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+ +G+VHR++KP N + + S K TDFG + ++ ++F + G+ Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181
Query: 268 VAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 317
+ P++ +R G D+WSIGV Y G PF KEV+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241
Query: 318 --------------------DFRRKPWPSISNSAKD----FVKKLLVKDPRARLTAAQAL 353
S+S + + +L D Q
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301
Query: 354 SHPW 357
+
Sbjct: 302 AETS 305
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 243 bits (623), Expect = 5e-77
Identities = 88/267 (32%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-H 70
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+++K Y ++ ME GGEL D I R E +A + +Q+L CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCH 128
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
H +VHRD+KPEN L + K DFGLS+ + G+ + GS Y APEV+ +
Sbjct: 129 RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 277 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+GPE D+WS GVI Y LLCG PF D+ +FK++ F + ++ S
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEY--LNRSVATL 241
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREG 361
+ +L DP R T H W ++
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQD 268
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 8e-77
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G +G +A ++ + VAVK ++ + E++K+E+ I + L H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-H 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
ENVVKFY + N Y+ +E C GGEL DRI E DA Q++ H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLH 122
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYYVAPEVL 273
G+ HRD+KPEN L E +LK +DFGL+ + + + + G+ YVAPE+L
Sbjct: 123 GIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNS 330
KR+ DVWS G++ +L G P+ ++ + + PW I ++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSA 237
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ K+LV++P AR+T W +
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 246 bits (629), Expect = 1e-76
Identities = 53/363 (14%), Positives = 95/363 (26%), Gaps = 46/363 (12%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLK-TKQHQKTNSRRQTGVIPCGKRTDFGYD-KDFD 95
+H D+ + + +E Y + + K+ V P T +
Sbjct: 2 SHMEAGDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGE 61
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-- 153
R+ + + L G ++ D + A+K +E + L
Sbjct: 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121
Query: 154 ---------------------AGHENVVKFYNAFEDDNY--VYIAMELCEG-----GELL 185
+ +D + M L
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181
Query: 186 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
D + + ++ Q++R+AA GLVH P+N D L D
Sbjct: 182 DFVYVFR-GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGD 237
Query: 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWD 302
K G + Y E L + + W +G+ Y + C PF
Sbjct: 238 VSAL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295
Query: 303 KTEDGIFKEVL-----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
T + + K + + L D R RL +A+ P
Sbjct: 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355
Query: 358 VRE 360
+
Sbjct: 356 FLQ 358
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 242 bits (621), Expect = 1e-76
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 12/278 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I L H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+++ YN F D +Y+ +E GEL + +K R+ E+ +A + ++ CH
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCH 131
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
++HRD+KPEN L LK DFG S P + + + G+ Y+ PE+++ K
Sbjct: 132 ERKVIHRDIKPENLLM---GYKGELKIADFGWS-VHAPSLRRRTMCGTLDYLPPEMIEGK 187
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
+ + D+W GV+ Y L G PF + + ++ D + P+ +S+ +KD +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPF--LSDGSKDLI 243
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 373
KLL P RL + HPWV+ P+ S
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 281
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 244 bits (625), Expect = 3e-76
Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K +G G FG + DK + VAVK IE+ I E+V+RE+ ++L H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q+L + CH
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCH 133
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L LK DFG S + + VG+ Y+APEVL R+
Sbjct: 134 SMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 277 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAK 332
G +DVWS GV Y++L G PF D E +++ ++ + IS
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC 252
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS----------------VLNN 376
+ ++ V DP R++ + +H W + A + + ++
Sbjct: 253 HLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQI 312
Query: 377 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 421
+ + + + + LD ++ D D ID+D +G I
Sbjct: 313 ISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDIDSSGEI 357
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 1e-75
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 24/288 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKR 145
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K++ +ED V
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMEL-CEGGELLDRILAKKDSRYTEKDAAVV 204
E+ IL + H N++K + FE+ + + ME G +L I R E A+ +
Sbjct: 79 EIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYI 135
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
RQ++ L ++HRD+K EN + ED ++K DFG + +++ GK F G+
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGT 192
Query: 265 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
Y APEVL GPE ++WS+GV Y L+ PF + +E +
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAA--IHPP 244
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 370
+S V LL P R T + ++ PWV + + ++ +
Sbjct: 245 YL--VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWE 290
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 1e-75
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 22/295 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + K +G G F +A G VA+K I+K + + P +++ + REV+I++ L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCH 131
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+VHRD+K EN L D ++K DFG S+ G K G+ Y APE+ + K
Sbjct: 132 QKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
GPE DVWS+GVI Y L+ G PF + + + VLR +R + +S ++
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKYRIPFY--MSTDCENL 244
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIP---------IDISVLNNMRQF 380
+K+ LV +P R T Q + W+ G + E+ D ++ M
Sbjct: 245 LKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGM 299
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 240 bits (615), Expect = 3e-75
Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 16/319 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G +G +A ++ + VAVK ++ + E++K+E+ I + L H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-H 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
ENVVKFY + N Y+ +E C GGEL DRI E DA Q++ H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLH 122
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYYVAPEVL 273
G+ HRD+KPEN L E +LK +DFGL+ + + + + G+ YVAPE+L
Sbjct: 123 GIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNS 330
KR+ DVWS G++ +L G P+ ++ + + PW I ++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSA 237
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA 390
+ K+LV++P AR+T W + ++ +S+ Q
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSN 297
Query: 391 LRALASTLDDEELADLRDQ 409
L +
Sbjct: 298 LDFSPVNSASRTPGSGWSK 316
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 4e-75
Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 28/313 (8%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
TK Q + T P G + + F+ Y +G LLG G FG + + +V
Sbjct: 4 TKPLQGPPAPPGTPTPPPGGKDR----EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQV 59
Query: 125 AVKKIEKNKMILPIAVED---VKREVKILQAL---AGHENVVKFYNAFEDDNYVYIAMEL 178
A+K I +N+++ + D EV +L + GH V++ + FE + +E
Sbjct: 60 AIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLER 119
Query: 179 -CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237
+L D I K E + Q++ CH G+VHRD+K EN L
Sbjct: 120 PLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--R 175
Query: 238 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLC 295
K DFG + + D G+ Y PE + R + VWS+G++ Y ++C
Sbjct: 176 RGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC 234
Query: 296 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
G PF +E+L + +S +++ L P +R + + L
Sbjct: 235 GDIPFERD------QEILEA--ELHFPAH--VSPDCCALIRRCLAPKPSSRPSLEEILLD 284
Query: 356 PWVREGGDASEIP 368
PW++ + +
Sbjct: 285 PWMQTPAEDVPLN 297
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 242 bits (620), Expect = 4e-74
Identities = 94/300 (31%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G LG G FG V + G +VAVK + + K+ V ++RE++ L+ H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+++K Y + +++ ME GGEL D I R EK++ + +Q+L CH
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCH 133
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
H +VHRD+KPEN L + K DFGLS+ + G+ + GS Y APEV+ +
Sbjct: 134 RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 190
Query: 277 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+GPE D+WS GVI Y LLCG PF D +FK++ F + ++ S
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVISL 246
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREGG---------DASEIPIDISVLNNMRQFVKYSR 385
+K +L DP R T H W ++ S ID L + + + S
Sbjct: 247 LKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSE 306
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 4e-74
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 21/299 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG +AT +VA+K I + + V+RE+ L+ L H
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+++K Y+ + + +E GGEL D I+ KK R TE + +Q++ CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCH 125
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
H +VHRD+KPEN L ++ ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 126 RHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 277 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+GPE DVWS G++ Y++L GR PF D+ +FK+V + + +S A+
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YVMPDF--LSPGAQSL 238
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--------IDISVLNNMRQFVKYSR 385
+++++V DP R+T + PW P D +++ + + + +S
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSE 297
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 4e-73
Identities = 72/330 (21%), Positives = 119/330 (36%), Gaps = 27/330 (8%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH+ Q + + + + + + + + G P + F
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRP------ESFFQ 56
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + LGHG +G + K +G AVK+ P EV + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-PKDRARKLAEVGSHEKVGQ 115
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H V+ A+E+ +Y+ ELC G L + E +R L A
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHC-EAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H GLVH D+KP N K DFGL + + G Y+APE+L+
Sbjct: 174 HSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 276 KSGPESDVWSIGVITYILLCGRRPF-----WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
G +DV+S+G+ + C W + G +S+
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF----------TAGLSSE 280
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ + +L DP+ R TA L+ P +R+
Sbjct: 281 LRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 242 bits (618), Expect = 5e-72
Identities = 65/316 (20%), Positives = 125/316 (39%), Gaps = 32/316 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G FGY + G++VA+K+ + P E E++I++ L H
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLN-H 71
Query: 157 ENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQML 209
NVV + + +AME CEGG+L + E ++ +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H + ++HRD+KPEN + + + K D G + + G+ + VG+ Y+A
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
PE+L++K D WS G + + + G RPF + + +R K + + ++
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251
Query: 329 NS--------------------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA-SEI 367
+ + +++ +L+ R R T Q + + S
Sbjct: 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311
Query: 368 PIDISVLNNMRQFVKY 383
+ + + + R
Sbjct: 312 LLSVMNMVSGRVHTYP 327
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 2e-71
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 23/278 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
Y + +G G +G K++G + K+++ M + + EV +L+ L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELK- 63
Query: 156 HENVVKFYNAFED--DNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRV 211
H N+V++Y+ D + +YI ME CEGG+L I K+ E+ V+ Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 212 AAECH-----LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGS 264
ECH H ++HRD+KP N FL ++K DFGL+ + F + VG+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
YY++PE + R S +SD+WS+G + Y L PF ++ + ++ K
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR----R 235
Query: 324 WPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P S+ + + ++L R + + L +P + E
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 5e-71
Identities = 65/324 (20%), Positives = 122/324 (37%), Gaps = 47/324 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK--------------NKMILPIAVED 142
Y I + L G+F + A+KK EK +K+ + +D
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 143 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------DSRY 196
K E++I+ + +E + + + VYI E E +L
Sbjct: 90 FKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 197 TEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255
+ +++ +L + H + HRD+KP N L ++ +K +DFG S+
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDFGESE-YMVD 204
Query: 256 KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKE 311
KK + G+ ++ PE + +G + D+WS+G+ Y++ PF K + +F
Sbjct: 205 KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
Query: 312 VLRNKPDF---------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ ++ +SN DF+K L K+P R+T+ AL H
Sbjct: 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324
Query: 357 WVREGGDASEIPIDISVLNNMRQF 380
W+ + + ++
Sbjct: 325 WLADTNIEDLREFSKELYKKRKKL 348
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 228 bits (584), Expect = 1e-70
Identities = 76/327 (23%), Positives = 136/327 (41%), Gaps = 31/327 (9%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + ++ + + + +Y +G LLG G
Sbjct: 5 HHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKE---------KEPLESQYQVGPLLGSGG 55
Query: 109 FGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA-GHENVVKFYN 164
FG Y ++ VA+K +EK+++ + + V EV +L+ ++ G V++ +
Sbjct: 56 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115
Query: 165 AFEDDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
FE + + +E E +L D I + E+ A Q+L CH G++HR
Sbjct: 116 WFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHR 173
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPES 281
D+K EN L LK DFG +K + D G+ Y PE ++ G +
Sbjct: 174 DIKDENILIDL--NRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSA 230
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
VWS+G++ Y ++CG PF +E++R + + +S+ + ++ L
Sbjct: 231 AVWSLGILLYDMVCGDIPFEHD------EEIIRGQ--VFFRQR--VSSECQHLIRWCLAL 280
Query: 342 DPRARLTAAQALSHPWVREGGDASEIP 368
P R T + +HPW+++ E
Sbjct: 281 RPSDRPTFEEIQNHPWMQDVLLPQETA 307
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 1e-70
Identities = 73/300 (24%), Positives = 141/300 (47%), Gaps = 14/300 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G FG + +G + +K+I ++M E+ +REV +L + H
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMK-H 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V++ +FE++ +YI M+ CEGG+L RI A+K + E Q+ H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 217 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK 274
++HRD+K +N FL K D +++ DFG++ + + + +G+ YY++PE+ +
Sbjct: 143 DRKILHRDIKSQNIFLTK----DGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAK 332
K +SD+W++G + Y L + F + + +++ P S +
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF----PPVSLHYSYDLR 254
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 392
V +L ++PR R + L ++ + + P I+ ++ F K+ A R
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKR 314
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 6e-70
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 38/288 (13%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
DK F + +L+G G FG + A + +G +K+++ N E +REVK L
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKAL 58
Query: 151 QALAGHENVVKFYNAFED----------------DNYVYIAMELCEGGELLDRILAKKDS 194
L H N+V + ++ ++I ME C+ G L I ++
Sbjct: 59 AKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 195 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIK 253
+ + A + Q+ + H L++RD+KP N FL +K DFGL +K
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD----TKQVKIGDFGLVTSLK 173
Query: 254 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
K G+ Y++PE + + G E D++++G+I LL ++ F ++
Sbjct: 174 NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDL 231
Query: 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K ++KLL K P R ++ L V +
Sbjct: 232 RDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 228 bits (582), Expect = 1e-69
Identities = 54/388 (13%), Positives = 115/388 (29%), Gaps = 69/388 (17%)
Query: 37 HNHHARNDTTHKHQH----------QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRT 86
H+HH + + + ++ N + +S T + G+
Sbjct: 3 HHHHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPF 62
Query: 87 DFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
+ R G +LG ATD+ G+ V + A++ +K
Sbjct: 63 RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 122
Query: 146 EVKILQALA------------------------GHENVVKFYNAFEDDN--YVYIAMELC 179
EV L+ L + +++ D +
Sbjct: 123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 182
Query: 180 EG--GELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
+ + + + + Q++R+ A H +GLVH ++P + +
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-- 240
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS------------GPESDV 283
+ + T F S + PE+ R++ D
Sbjct: 241 -QRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDA 296
Query: 284 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 343
W++G++ Y + C P G + + R+ + I + ++ L
Sbjct: 297 WALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPK 348
Query: 344 RARLTAAQALSHPWVREGGD--ASEIPI 369
RL QA+ P + ++ +P+
Sbjct: 349 EDRLLPLQAMETPEYEQLRTELSAALPL 376
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 224 bits (574), Expect = 2e-69
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 22/297 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAG 155
+Y +G LLG G +G D R AVK ++K K+ +P +VK+E+++L+ L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 156 HENVVKFYN--AFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H+NV++ + E+ +Y+ ME C G E+LD + K R+ A Q++
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---RFPVCQAHGYFCQLIDG 121
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYV 268
H G+VH+D+KP N L +LK + G++ + GS +
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 269 APEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE+ SG + D+WS GV Y + G PF +F+ + + +
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD- 235
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382
D +K +L +P R + Q H W R+ +E P+ I + + +
Sbjct: 236 -CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWR 291
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 8e-68
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--------------------- 135
+YT+ +G G +G +A ++ + A+K + K K+I
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 136 --LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAK 191
+E V +E+ IL+ L H NVVK +D ++++Y+ EL G +++
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--- 129
Query: 192 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+E A + +++ H ++HRD+KP N L ED +K DFG+S+
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE 186
Query: 252 IKPGKKF-QDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTED 306
K + VG+ ++APE L K SG DVW++GV Y + G+ PF D+
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 307 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ ++ +F P I+ KD + ++L K+P +R+ + HPWV
Sbjct: 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 2e-65
Identities = 59/315 (18%), Positives = 111/315 (35%), Gaps = 33/315 (10%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGD 122
+ + H +S + + G ++ Y + LG G F Y + +G
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGHMVIID-----NKHYLFIQKLGEGGFSYVDLVEGLHDGH 55
Query: 123 RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----NYVYIAMEL 178
A+K+I ++ E+ +RE + + H N+++ + + ++ +
Sbjct: 56 FYALKRILCHEQ---QDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 179 CEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236
+ G L + I L K + TE ++ + R H G HRD+KP N L
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD-- 169
Query: 237 EDSSLKATDFGLSDFIKPGKKFQD----------IVGSAYYVAPEVLKRKS----GPESD 282
+ D G + + + Y APE+ +S +D
Sbjct: 170 -EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 342
VWS+G + Y ++ G P+ + G L + P S++ + ++ D
Sbjct: 229 VWSLGCVLYAMMFGEGPYDMVFQKGDSV-ALAVQNQLSIPQSPRHSSALWQLLNSMMTVD 287
Query: 343 PRARLTAAQALSHPW 357
P R LS
Sbjct: 288 PHQRPHIPLLLSQLE 302
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 3e-64
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 351 QALSHPWVRE-GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 409
H RE + + ++L N++ F K + LK+ AL +A L D E+ +LR+
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 410 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469
F A+DVD +G++S +E+ L K + ++ + ++L+ ID N G + +++F+AAT+
Sbjct: 63 FIALDVDNSGTLSSQEILDGL-KKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121
Query: 470 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEE 521
+ + F+ FDID +G I+ EEL+ G +ID LL+E
Sbjct: 122 KQTYLKKE----VCL--IPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQE 175
Query: 522 ADIDKDGRISLSEFRRLLR 540
D++ DG I EF ++
Sbjct: 176 VDLNGDGEIDFHEFMLMMS 194
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 3e-63
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 14/279 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ I K +G GQF Y A +G VA+KK++ ++ A D +E+ +L+ L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-H 91
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAE 214
NV+K+Y +F +DN + I +EL + G+L I K+ E+ Q+
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEV 272
H ++HRD+KP N F+ +K D GL F +VG+ YY++PE
Sbjct: 152 MHSRRVMHRDIKPANVFITA----TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISN 329
+ +SD+WS+G + Y + + PF+ + + K++ + D+ P S
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSE 265
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
+ V + DP R AS +
Sbjct: 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 4e-62
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 353 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 412
+ H G + I VL N + + + ++ A+ +A +D ++ L+ F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 413 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472
+D D G I+ E++++ L K KL + +L ID + G +D++EF+AA L Q
Sbjct: 61 LDEDGKGYITKEQLKKGLEK-DGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALDRKQ 118
Query: 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--------IDPLLEE 521
L + + AF FD+D DG IT EL + KG+ + ++ +
Sbjct: 119 LSKK-----LIY--CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRD 171
Query: 522 ADIDKDGRISLSEFRRLLR 540
D + DG+I EF +++
Sbjct: 172 VDKNNDGKIDFHEFSEMMK 190
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 3e-60
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 32/288 (11%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + + +G G+FG + + +G A+K+ +K + ++ REV
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAV 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLR 210
L H +VV++++A+ +D+++ I E C GG L D I + S + E + ++ Q+ R
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 211 VAAECHLHGLVHRDMKPEN-FLFKS---------------AKEDSSLKATDFGLSDFIKP 254
H LVH D+KP N F+ ++ A K D G I
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 255 GKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+ G + ++A EVL+ P++D++++ +T + G P + + E+
Sbjct: 187 PQVE---EGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQ--WHEI 240
Query: 313 LRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + P +S + +K ++ DP R +A + H +
Sbjct: 241 RQGRLP----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 1e-59
Identities = 72/301 (23%), Positives = 119/301 (39%), Gaps = 40/301 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + LG G FG + A +K + A+K+I +A E V REVK L L H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLE-H 62
Query: 157 ENVVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAV- 203
+V+++NA+ + N Y+YI M+LC L D + + E+ +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------D 250
+ Q+ H GL+HRD+KP N F D +K DFGL
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 251 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGI 308
+ + VG+ Y++PE + S + D++S+G+I + LL PF + E
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT 236
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
+V K + V+ +L P R A + + + +
Sbjct: 237 LTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTV 293
Query: 369 I 369
+
Sbjct: 294 L 294
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 201 bits (512), Expect = 4e-59
Identities = 58/380 (15%), Positives = 117/380 (30%), Gaps = 55/380 (14%)
Query: 23 NHHRNANKEEAKRRHNHHARN-DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP 81
+HH +++ E + + ++ N + +S T +
Sbjct: 3 HHHHHSSGRENLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWN 62
Query: 82 CGKRTDFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
G+ + R G +LG ATD+ G+ V + A+
Sbjct: 63 TGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAI 122
Query: 141 EDVKREVKILQALAG---------------------HENVVKFYNAFEDDNYVYIAMEL- 178
+ +K EV L+ L G K D+ +++
Sbjct: 123 KQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF 182
Query: 179 ------CEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENF 230
+ +L+ + + A + Q++R+ A H +GLVH ++P +
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI 242
Query: 231 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPEVL------KRKSGPE 280
+ + + T F ++ G +G + A +L
Sbjct: 243 VLD---QRGGVFLTGFEHL--VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W++G+ Y + C P D G + + R+ + I + ++ L
Sbjct: 298 FDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLR 349
Query: 341 KDPRARLTAAQALSHPWVRE 360
RL QA+ P +
Sbjct: 350 YPKEDRLLPLQAMETPEYEQ 369
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 1e-58
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 39/290 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ R + ++L G F + Y A D +G A+K++ N+ + +EV ++ L+
Sbjct: 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---EKNRAIIQEVCFMKKLS 83
Query: 155 GHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
GH N+V+F +A + ELC+G + + + +
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 207 QMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 261
Q R H ++HRD+K EN L + ++K DFG + I +
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 262 ----------VGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDG 307
+ Y PE++ S G + D+W++G I Y+L + PF EDG
Sbjct: 201 RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDG 256
Query: 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
++ K + P + ++ +L +P RL+ A+ +
Sbjct: 257 AKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 3e-55
Identities = 76/322 (23%), Positives = 122/322 (37%), Gaps = 31/322 (9%)
Query: 51 HQHQERAKNYQQLKTKQHQ---KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H AK + K + +T + K D+ Y ++ T +G G
Sbjct: 11 HSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEV-HWMTHQPRVGRG 69
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK-REVKILQALAGHENVVKFYNAF 166
FG + DK G + AVKK+ +E + E+ L+ +V Y A
Sbjct: 70 SFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLS-SPRIVPLYGAV 119
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
+ +V I MEL EGG L L K+ E A + Q L H ++H D+K
Sbjct: 120 REGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKRKS-GP 279
+N L + + S DFG + ++P I G+ ++APEV+ K
Sbjct: 178 ADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 280 ESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
+ D+WS + +L G P+ K + P R P PS + +++
Sbjct: 236 KVDIWSSC-CMMLHMLNGCHPWTQYFRGPLCLK-IASEPPPIREIP-PSCAPLTAQAIQE 292
Query: 338 LLVKDPRARLTAAQALSHPWVR 359
L K+P R +A +
Sbjct: 293 GLRKEPVHRASAMELRRKVGKA 314
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 1e-54
Identities = 56/285 (19%), Positives = 96/285 (33%), Gaps = 32/285 (11%)
Query: 95 DRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ + LLG G F Y AT D N + +K + P + ++
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMER 120
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS---RYTEKDAAVVVR 206
L+ +KFY+A N + EL G LL+ I K++ +
Sbjct: 121 LKPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKS--------AKEDSSLKATDFGLSDFIK---PG 255
+ML + + H ++H D+KP+NF+ + + L D G S +K G
Sbjct: 180 RMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG 239
Query: 256 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 314
F ++ + E+L K + D + + Y +L G E G K
Sbjct: 240 TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN-EGGECKPEGL 298
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ W +F +L L + L +
Sbjct: 299 FRRLPHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKK 336
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 3e-54
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 378 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 437
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGAN 59
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
LKES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 498 GFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 545
G+ITP+EL+ G I+ L+ + D D DGRI +EF +++ SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 9e-54
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 22/280 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+LG G +G Y D +N R+A+K+I + + + E+ + + L H
Sbjct: 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-H 78
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAE 214
+N+V++ +F ++ ++ I ME GG L +L K E+ +Q+L
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+K +N L + LK +DFG S + + G+ Y+APE++
Sbjct: 138 LHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 195
Query: 274 KRKS---GPESDVWSIGVITYI-LLCGRRPFWDKTEDG--IFK-EVLRNKPDFRRKPWPS 326
+ G +D+WS+G T I + G+ PF++ E +FK + + P+ P S
Sbjct: 196 DKGPRGYGKAADIWSLG-CTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI---P-ES 250
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366
+S AK F+ K DP R A L +++ +
Sbjct: 251 MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK 290
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 1e-53
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 369 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 426
I +VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 427 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 486
LA +K+ + ILQA+D N G + ++EF+A +E L+
Sbjct: 62 YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIEST-----FLK-- 111
Query: 487 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDG--------RISLSE 534
AAF K D D DG+I+ ++ K ID K G +IS E
Sbjct: 112 AAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQE 171
Query: 535 FRRLLRT 541
F+ + +
Sbjct: 172 FKDYMLS 178
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 2e-53
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 368 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEM 426
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+
Sbjct: 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKEL 62
Query: 427 RQALAKDLPW----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476
+ K + W E+ V ILQ++D + +G +++SEFV + L
Sbjct: 63 IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSR 122
Query: 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISL 532
+ L AAF++FD D G IT EEL G+ + +L+E D + DG +
Sbjct: 123 E----RLL--AAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDF 176
Query: 533 SEFRRLLRT 541
EF +++
Sbjct: 177 EEFVEMMQK 185
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 3e-53
Identities = 90/280 (32%), Positives = 135/280 (48%), Gaps = 32/280 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+DF GK+LG G F +A + A A+K +EK +I V V RE ++
Sbjct: 30 EDFK----FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L H VK Y F+DD +Y + + GELL I +K + E ++ V
Sbjct: 86 RL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEI--V 140
Query: 212 AAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS---DFIKPGKKFQDIVGS 264
+A +LH G++HRD+KPEN L + ++ TDFG + + VG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFGTAKVLSPESKQARANSFVGT 195
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
A YV+PE+L KS SD+W++G I Y L+ G PF E IF+++++ + DF P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF---P 252
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQA------LSHPW 357
A+D V+KLLV D RL + +HP+
Sbjct: 253 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 5e-50
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 32/306 (10%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
D +D + + +L+G+G +G Y G A+K ++ + E++
Sbjct: 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEI 67
Query: 144 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
K+E+ +L+ + H N+ +Y AF D+ +++ ME C G + D I K +
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 256
E+ A + R++LR + H H ++HRD+K +N L E++ +K DFG+S +
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVG 184
Query: 257 KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITYI-LLCGRRPFWD----KTE 305
+ +G+ Y++APEV+ P++ D+WS+G IT I + G P D +
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-ITAIEMAEGAPPLCDMHPMRA- 242
Query: 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
+F P + K W S + F++ LVK+ R Q + HP++R+ +
Sbjct: 243 --LFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNER 297
Query: 366 EIPIDI 371
++ I +
Sbjct: 298 QVRIQL 303
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-49
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 21/280 (7%)
Query: 91 DKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D R+ +G G F Y D VA +++ K + + K E ++
Sbjct: 20 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEM 78
Query: 150 LQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
L+ L H N+V+FY+++E + + EL G L K+ K
Sbjct: 79 LKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT--YLKRFKVMKIKVLRSWC 135
Query: 206 RQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
RQ+L+ LH ++HRD+K +N S+K D GL+ +K + +
Sbjct: 136 RQILK--GLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLAT-LKRASFAKAV 190
Query: 262 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFR 320
+G+ ++APE+ + K DV++ G+ + P+ + I++ V
Sbjct: 191 IGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--P 248
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K+ ++ + ++ R + L+H + +E
Sbjct: 249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 7e-49
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 18/320 (5%)
Query: 52 QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGY 111
H + L T+ + R D +G G G
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVD-QGDPRLLLDSYVKIGEGSTGI 60
Query: 112 TYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171
+A +K +G +VAVK ++ K E + EV I++ H NVV+ Y ++
Sbjct: 61 VCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEE 116
Query: 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 231
+++ ME +GG L D + R E+ A V +L+ A H G++HRD+K ++ L
Sbjct: 117 LWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSIL 173
Query: 232 FKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVI 289
D +K +DFG I K + +VG+ Y++APEV+ R E D+WS+G I
Sbjct: 174 L---TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLG-I 229
Query: 290 TYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 347
I ++ G P++ + + + P + +S +DF++++LV+DP+ R
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS--HKVSPVLRDFLERMLVRDPQERA 287
Query: 348 TAAQALSHPWVREGGDASEI 367
TA + L HP++ + G +
Sbjct: 288 TAQELLDHPFLLQTGLPECL 307
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 1e-47
Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 17/281 (6%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D ++YT + +G G G Y A D A G VA++++ + E + E+ ++
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVM 71
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ + N+V + +++ + +++ ME GG L D + ++ E A V R+ L+
Sbjct: 72 RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ 127
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVA 269
H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y++A
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 270 PEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPS 326
PEV+ RK+ GP+ D+WS+G I I ++ G P+ ++ ++ P+ +
Sbjct: 185 PEVVTRKAYGPKVDIWSLG-IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EK 241
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
+S +DF+ + L D R +A + L H +++ S +
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-47
Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 28/290 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 70
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H +VK A+ D ++I +E C GG + I+ + D TE VV RQML
Sbjct: 71 ATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLE 128
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVA 269
H ++HRD+K N L + ++ DFG+S K +G+ Y++A
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 270 PEVLKRKSGPES------DVWSIGVITYI-LLCGRRPFWD----KTEDGIFKEVLRNKPD 318
PEV+ ++ ++ D+WS+G IT I + P + + + K + P
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLG-ITLIEMAQIEPPHHELNPMRV---LLKIAKSDPPT 241
Query: 319 FRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
W S +DF+K L K+P R +AAQ L HP+V +
Sbjct: 242 LLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKAL 288
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 1e-47
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 20/330 (6%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTN-SRRQTGVIPCGKRTDFGYDKDFDRRYTIGKL 103
+ + H H H + L + + + G + + + D ++ ++ +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLRE 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+GHG FG Y A D N + VA+KK+ + +D+ +EV+ LQ L H N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYR 120
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ ++ ++ ME C G D +L E + A V L+ A H H ++HR
Sbjct: 121 GCYLREHTAWLVMEYCLGS-ASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GP 279
D+K N L E +K DFG + + P F VG+ Y++APEV+
Sbjct: 179 DVKAGNILL---SEPGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 280 ESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
+ DVWS+G IT I L + P ++ ++ P + W S ++FV
Sbjct: 233 KVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDS 288
Query: 338 LLVKDPRARLTAAQALSHPWVREGGDASEI 367
L K P+ R T+ L H +V + I
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFVLRERPPTVI 318
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 3e-47
Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPR------ARLTAAQALSHPWVREGGDASEIPIDISV 373
R + I+ ++ KL D + AR A + A + + +
Sbjct: 39 RDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAAR--GDAAAEKQRLASLL 96
Query: 374 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433
+ Y+RL+ L +E+ LR F + V +G S ++++Q LAK
Sbjct: 97 KDLEDDASGYNRLRPSK-----PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK- 150
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 493
+ E + ++ ++ +T G + + VA + L A F K D
Sbjct: 151 YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAAL------------VADFRKID 198
Query: 494 IDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 538
+ +G ++ +E R + K D L AD D+ + SE+ L
Sbjct: 199 TNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHL 248
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462
L LR + D DK+G +S EE+++ L + + +D + + + E
Sbjct: 252 LLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311
Query: 463 FVAATLHVHQLE 474
FV L + +
Sbjct: 312 FVMLVLLMFHDD 323
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-46
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 19/282 (6%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
K + + + + LG G +G Y A K G VA+K++ ++++ +E+ I+
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIM 78
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
Q +VVK+Y ++ + ++I ME C G + D I+ ++ TE + A +++ L+
Sbjct: 79 QQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLK 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVA 269
H +HRD+K N L + K DFG++ + K ++G+ +++A
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA 193
Query: 270 PEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFR-RKPWP 325
PEV++ +D+WS+G IT I + G+ P+ D IF P FR + W
Sbjct: 194 PEVIQEIGYNCVADIWSLG-ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW- 251
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
S++ DFVK+ LVK P R TA Q L HP+VR S +
Sbjct: 252 --SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 5e-46
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 33/317 (10%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
+L ++ + ++ K D DF+ K++G G F V K
Sbjct: 29 GASELAQDKYVADFLQWAEPIVVRLKEVRLQRD-DFEIL----KVIGRGAFSEVAVVKMK 83
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
G A+K + K M+ V + E +L + + + AF+D+NY+Y+ ME
Sbjct: 84 QTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-VNGDRRWITQLHFAFQDENYLYLVMEY 142
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 236
GG+LL +L+K R + A + ++ V A +H G VHRD+KP+N L
Sbjct: 143 YVGGDLL-TLLSKFGERIPAEMARFYLAEI--VMAIDSVHRLGYVHRDIKPDNILL---- 195
Query: 237 EDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS--------GPESDVW 284
D ++ DFG ++ + VG+ Y++PE+L+ GPE D W
Sbjct: 196 -DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDP 343
++GV Y + G+ PF+ + + +++ K + A+DF+++LL P
Sbjct: 255 ALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPP 313
Query: 344 RARLTAAQAL---SHPW 357
RL A +HP+
Sbjct: 314 ETRLGRGGAGDFRTHPF 330
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 5e-46
Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 57/304 (18%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
Y + + LG G++ + A + N ++V VK ++ P+ + +KRE+KIL+ L
Sbjct: 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------PVKKKKIKREIKILENLR 88
Query: 155 GHENVVKFYNAFEDD---NYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQML 209
G N++ + +D + + + L + L D R+ + ++L
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHV-NNTDFKQLYQTLTDYDIRF-------YMYEIL 140
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+ CH G++HRD+KP N + L+ D+GL++F PG+++ V S Y+
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 270 PEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------------------------WD 302
PE+L + D+WS+G + ++ + PF D
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 303 KTEDGIFKEVLRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
K + RK W +S A DF+ KLL D ++RLTA +A+
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
Query: 354 SHPW 357
HP+
Sbjct: 319 EHPY 322
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 6e-46
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 31/313 (9%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
++ L+ ++ R I + + D++ + K++G G FG + K
Sbjct: 37 DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAE-DYE----VVKVIGRGAFGEVQLVRHK 91
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
+ A+K + K +MI E I+ A A VV+ + AF+DD Y+Y+ ME
Sbjct: 92 STRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFYAFQDDRYLYMVMEY 150
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 236
GG+L+ +++ EK A ++ V A +H G +HRD+KP+N L
Sbjct: 151 MPGGDLV-NLMSNY--DVPEKWARFYTAEV--VLALDAIHSMGFIHRDVKPDNMLL---- 201
Query: 237 EDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS-----GPESDVWSIG 287
D S LK DFG + + VG+ Y++PEVLK + G E D WS+G
Sbjct: 202 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 288 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 347
V Y +L G PF+ + G + +++ +K IS AK+ + L D RL
Sbjct: 261 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRL 319
Query: 348 TAAQAL---SHPW 357
H +
Sbjct: 320 GRNGVEEIKRHLF 332
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 1e-45
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 16/280 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D + +T + +G G FG + D VA+K I+ + I ED+++E+ +L
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVL 74
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 75 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILK 130
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVA 269
H +HRD+K N L E +K DFG++ + K VG+ +++A
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 187
Query: 270 PEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
PEV+K+ + ++D+WS+G IT I L G P + + + +N P +
Sbjct: 188 PEVIKQSAYDSKADIWSLG-ITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY--- 243
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
S K+FV+ L K+P R TA + L H ++ +
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 8e-45
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCH-H 72
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKKDSRYTEKDAAVVVRQMLR 210
N+V +Y +F + +++ M+L GG +LD K E A ++R++L
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------KPGKKFQDIVGS 264
H +G +HRD+K N L ED S++ DFG+S F+ K + VG+
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 265 AYYVAPEVLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKP---- 317
++APEV+++ G ++D+WS G IT I L G P+ + L+N P
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFG-ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 318 --DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
++ S + + L KDP R TAA+ L H + ++ +
Sbjct: 249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 2e-44
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 30/280 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
F+ IGK G FG + A+K + K K + V +V +E++I+Q
Sbjct: 16 HFEILRAIGK----GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L H +V + +F+D+ +++ ++L GG+L R +++ + E+ + + ++ V
Sbjct: 72 LE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYHLQQNVHFKEETVKLFICEL--VM 126
Query: 213 AECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYV 268
A +L ++HRDMKP+N L D + TDF ++ + + + G+ Y+
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILL-----DEHGHVHITDFNIAAMLPRETQITTMAGTKPYM 181
Query: 269 APEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRR 321
APE+ + G D WS+GV Y LL GRRP+ ++ I +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP- 240
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 360
+ S +KKLL +P R + + + P++ +
Sbjct: 241 ---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 4e-44
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 37/318 (11%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N L+ +++ K+ + DF+ I K++G G FG V K
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHRE-DFE----ILKVIGRGAFGEVAVVKLK 96
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
A+K + K +M+ + E +L + + + AF+DDN +Y+ M+
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDY 155
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 236
GG+LL L+K + R E+ A + +M V A +H VHRD+KP+N L
Sbjct: 156 YVGGDLLTL-LSKFEDRLPEEMARFYLAEM--VIAIDSVHQLHYVHRDIKPDNILM---- 208
Query: 237 EDSS--LKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKS------GPESDV 283
D + ++ DFG + + VG+ Y++PE+L+ GPE D
Sbjct: 209 -DMNGHIRLADFGSC---LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 284 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKD 342
WS+GV Y +L G PF+ ++ + +++ +K F+ + +S +AKD +++L+
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR 324
Query: 343 PRARLTAAQAL---SHPW 357
RL HP+
Sbjct: 325 EH-RLGQNGIEDFKKHPF 341
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 4e-44
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 45/306 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQAL 153
+Y +G G +G + ++ G VA+KK E + +I IA+ RE+++L+ L
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQL 59
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V F +++ E C+ + L + E + Q L+
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYCDHT--VLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH H +HRD+KPEN L S +K DFG + P + D V + +Y +PE+
Sbjct: 117 FCHKHNCIHRDVKPENILITK---HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-------------EVLRN 315
L + GP DVW+IG + + L P W D ++ +V
Sbjct: 174 LVGDTQYGPPVDVWAIGCV-FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 316 KPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362
F +P+IS A +K L DP RLT Q L HP+
Sbjct: 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292
Query: 363 DASEIP 368
+ ++
Sbjct: 293 EIEDLA 298
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 6e-44
Identities = 81/327 (24%), Positives = 140/327 (42%), Gaps = 44/327 (13%)
Query: 43 NDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGK 102
N K + + + + K +K + Q FD K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----------DQFD----RIK 47
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKL 106
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GL 220
+F+D++ +Y+ ME GGE+ + ++ R++E A Q+ V +LH L
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQI--VLTFEYLHSLDL 162
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVLKRK 276
++RD+KPEN L ++ TDFG + K+ + G+ +APE++ K
Sbjct: 163 IYRDLKPENLLIDQ---QGYIQVTDFGFA------KRVKGRTWTLCGTPEALAPEIILSK 213
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
D W++GV+ Y + G PF+ I+++++ K F P S+ KD +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---P-SHFSSDLKDLL 269
Query: 336 KKLLVKDPRARLTAAQA-----LSHPW 357
+ LL D R + +H W
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKW 296
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 1e-43
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 26/283 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G K +G +AVK+I + + + ++ ++ + +V+FY
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRST--VDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 164 NAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--- 218
A + +I MEL + + + D E+ + ++ A HL
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK--ALNHLKENL 145
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
++HRD+KP N L + +K DFG+S + K +D G Y+APE + +
Sbjct: 146 KIIHRDIKPSNILLDRSGN---IKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSA 201
Query: 278 GPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
+ SDVWS+G IT L GR P+ W+ D + + V + P S
Sbjct: 202 SRQGYDVRSDVWSLG-ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S +FV L KD R + L HP++ E ++++
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLKHPFILM---YEERAVEVA 300
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 2e-43
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 45/327 (13%)
Query: 72 NSRRQTGVI-PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI- 129
+S +QTG + G+R + D + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQRYQAEIN-DLEN---LGEM-GSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 130 -EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 188
NK + + ++ ++ +V+ + F + V+IAMEL +++
Sbjct: 60 RSGNKEEN----KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC--AEKL 113
Query: 189 LAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATD 245
+ E+ + +++ A +L G++HRD+KP N L + +K D
Sbjct: 114 KKRMQGPIPERILGKMTVAIVK--ALYYLKEKHGVIHRDVKPSNILLDERGQ---IKLCD 168
Query: 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYI-LLCGRR 298
FG+S + K G A Y+APE + + +DVWS+G I+ + L G+
Sbjct: 169 FGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG-ISLVELATGQF 227
Query: 299 PFWDKTEDGIFK---EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
P+ K F+ +VL+ +P S + FVK L KD R R + L H
Sbjct: 228 PY--KNCKTDFEVLTKVLQEEPP-LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284
Query: 356 PWVREGGDASEIPIDISVLNNMRQFVK 382
+++ + +D + + K
Sbjct: 285 SFIKR---YETLEVD------VASWFK 302
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 3e-43
Identities = 89/360 (24%), Positives = 147/360 (40%), Gaps = 57/360 (15%)
Query: 39 HHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
T+ + ++ + +K + K S+ T V G+ D + Y
Sbjct: 2 SGRPRTTSFAESCKPVQQPSAFGSMKVSR-DKDGSKVTTVVATPGQGPDR----PQEVSY 56
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K++G+G FG Y A +G+ VA+KK+ ++K RE++I++ L H N
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKL-DHCN 108
Query: 159 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR----QM 208
+V+ F +D+ Y+ + ++ E + R+ + SR + + V+ Q+
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVA-RHYSRAKQTLPVIYVKLYMYQL 165
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
R A H G+ HRD+KP+N L LK DFG + + G+ + S YY
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYR 223
Query: 269 APEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL--------- 313
APE++ DVWS G + LL +P + D D + + +VL
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 314 --------RNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P + PW P A +LL P ARLT +A +H + E
Sbjct: 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 4e-43
Identities = 82/335 (24%), Positives = 133/335 (39%), Gaps = 49/335 (14%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-- 129
+ +GV + F + +Y L+G G +G +K G VA+KK
Sbjct: 5 HHHHSSGVDLGTENLYFQSME----KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLE 60
Query: 130 -EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 188
+ +KM+ IA+ RE+K+L+ L HEN+V + Y+ E + +
Sbjct: 61 SDDDKMVKKIAM----REIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDHT--ILDD 113
Query: 189 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248
L + + + Q++ CH H ++HRD+KPEN L +K DFG
Sbjct: 114 LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ---SGVVKLCDFGF 170
Query: 249 S-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DK 303
+ PG+ + D V + +Y APE+L K G DVW+IG + + P + D
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL-VTEMFMGEPLFPGDS 229
Query: 304 TEDGIFK-------------EVLRNKPDFR-------------RKPWPSISNSAKDFVKK 337
D ++ E+ P F + +P +S D KK
Sbjct: 230 DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKK 289
Query: 338 LLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
L DP R A+ L H + + G A ++
Sbjct: 290 CLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQ 324
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 9e-43
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 38/282 (13%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF I + LG G FG ++ + NG A+K ++K ++ VE E +L
Sbjct: 7 DFQ----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ H +++ + F+D +++ M+ EGGEL + +K R+ A ++
Sbjct: 63 VT-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEV--CL 117
Query: 213 AECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIV----GS 264
A +LH +++RD+KPEN L D + +K TDFG + K D+ G+
Sbjct: 118 ALEYLHSKDIIYRDLKPENILL-----DKNGHIKITDFGFA------KYVPDVTYTLCGT 166
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
Y+APEV+ K D WS G++ Y +L G PF+D ++++L + F P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF---P 223
Query: 324 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 360
P + KD + +L+ +D RL +HPW +E
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-42
Identities = 74/296 (25%), Positives = 115/296 (38%), Gaps = 42/296 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G +G +G +AVK+I N + + ++ I V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ----KRLLMDLDISMRTVDCPFTVT 70
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAECHLH 218
FY A + V+I MEL + LD+ K E + +++ A HLH
Sbjct: 71 FYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSIVK--ALEHLH 126
Query: 219 G---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 274
++HRD+KP N L + + +K DFG+S + K D G Y+APE +
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDID-AGCKPYMAPERIN 182
Query: 275 RKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPS 326
+ + SD+WS+G IT I L R P+ W + + V P +
Sbjct: 183 PELNQKGYSVKSDIWSLG-ITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF-- 239
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382
S DF + L K+ + R T + + HP+ D + FVK
Sbjct: 240 -SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT---LHESKGTD------VASFVK 285
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-42
Identities = 68/296 (22%), Positives = 134/296 (45%), Gaps = 42/296 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G + A ++ + VA+K++ + + +P A+ RE+ +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKEL 58
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H+N+V+ ++ D + + E C+ L + + + + Q+L+
Sbjct: 59 K-HKNIVRLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH ++HRD+KP+N L + LK +FGL+ F P + + V + +Y P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL-----------RN 315
L + D+WS G I L RP + + +D + + +L
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 316 KPDFRRKP-----------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
PD++ P P ++ + +D ++ LL +P R++A +AL HP+ +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 9e-41
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 10/264 (3%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ RY I LG G Y+A D +VA+K I ++ +REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
+ H+N+V + E+D+ Y+ ME EG L + I + + A Q+L
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIK 125
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPE 271
H +VHRD+KP+N L + +LK DFG++ + Q ++G+ Y +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 272 -VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSISN 329
+ +D++SIG++ Y +L G PF +T I K + + P+ I
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ 242
Query: 330 SAKDFVKKLLVKDPRARLTAAQAL 353
S + + + KD R Q +
Sbjct: 243 SLSNVILRATEKDKANRYKTIQEM 266
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 1e-40
Identities = 83/338 (24%), Positives = 136/338 (40%), Gaps = 54/338 (15%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKR-----TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
T + N + + K +D + + YT K++G+G FG + A
Sbjct: 3 FTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLV 62
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------EDDNYV 172
+ VA+KK+ ++K RE++I++ + H NVV F +D+ ++
Sbjct: 63 ESD-EVAIKKVLQDK-------RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPEN 229
+ +E E + R ++ + Q+LR A H G+ HRD+KP+N
Sbjct: 114 NLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN 171
Query: 230 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIG 287
L LK DFG + + G+ + S YY APE++ D+WS G
Sbjct: 172 LLLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTG 229
Query: 288 VITYILLCGRRPFWDKTE----DGIFK-------EVLRNK---------PDFRRKPW--- 324
+ L+ G+ F ++ I K E ++ P R P+
Sbjct: 230 CVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKV 289
Query: 325 --PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P A D + +LL P ARLTA +AL HP+ E
Sbjct: 290 FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-40
Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
RY LG G +G Y A D + VA+K+I E + +P A+ REV +L+ L
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI----REVSLLKEL 90
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H N+++ + ++ +++ E E + +D+ + + + Q++
Sbjct: 91 Q-HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKN-----PDVSMRVIKSFLYQLING 144
Query: 212 AAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 268
CH +HRD+KP+N L A E LK DFGL+ F P ++F + + +Y
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR 204
Query: 269 APEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK------------ 310
PE+L R D+WSI I +L F +E IF+
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264
Query: 311 -----EVLRNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ ++ P FR K + + D + +L DP R++A AL HP+
Sbjct: 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 4e-40
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 14/263 (5%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG ++A K A+K ++K+ +++ VE E ++L H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGL 220
+ F+ ++ ME GG+L+ I + ++ A +++ + + H G+
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEII-LGLQFLHSKGI 139
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
V+RD+K +N L D +K DFG+ + + K G+ Y+APE+L +
Sbjct: 140 VYRDLKLDNILLDK---DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN 196
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
D WS GV+ Y +L G+ PF + E+ +F + + P + R + AKD + KL
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR----WLEKEAKDLLVKL 252
Query: 339 LVKDPRARLTAAQAL-SHPWVRE 360
V++P RL + HP RE
Sbjct: 253 FVREPEKRLGVRGDIRQHPLFRE 275
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-39
Identities = 83/295 (28%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G Y A + G+ A+KKI EK +P + RE+ IL+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTI----REISILKEL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+VK Y+ + + E + L ++L + A + Q+L A
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH ++HRD+KP+N L E LK DFGL+ F P +K+ + + +Y AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK---------------- 310
L +K D+WS+G I ++ G F +E IF+
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 311 -EVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ N + PW + S D + K+L DP R+TA QAL H + +E
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-39
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 59/316 (18%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+ Y +G G +G A DK +G++VA+KK+ + +++ K RE+
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-------FAKRAYRELL 75
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+L+ + HENV+ + F + Y+ M + L +I+ +++E+
Sbjct: 76 LLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMG---LKFSEEKIQ 129
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
+V QML+ H G+VHRD+KP N ED LK DFGL+ V
Sbjct: 130 YLVYQMLKGLKYIHSAGVVHRDLKPGNLA---VNEDCELKILDFGLARHADAEMT--GYV 184
Query: 263 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------T 304
+ +Y APEV+ D+WS+G I +L G+ F +
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 244
Query: 305 EDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+ + K +++ P RK + P S A D ++K+L D RLTAAQAL
Sbjct: 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304
Query: 354 SHPWVREGGDASEIPI 369
+HP+ D E
Sbjct: 305 THPFFEPFRDPEEETE 320
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 3e-39
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 41/295 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALA 154
Y LG G + Y K + VA+K+I E + A+ REV +L+ L
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V ++ + + + E + L + L + + + + Q+LR A
Sbjct: 59 -HANIVTLHDIIHTEKSLTLVFEYLDKD--LKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
CH ++HRD+KP+N L E LK DFGL+ P K + + V + +Y P++L
Sbjct: 116 CHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 274 --KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----------LRNKP 317
+ D+W +G I Y + GR F T IF+ + + +
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 318 DFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+F+ P + + D + KLL + R R++A A+ HP+
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 5e-39
Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 30/329 (9%)
Query: 42 RNDTTHKHQ---HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
R + T Q +++A ++ + + V + + +F+
Sbjct: 96 REEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMN-EFE--- 151
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H
Sbjct: 152 -YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF 209
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+ +F+ + + ME GGEL + ++ ++E A ++ V+A +LH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEI--VSALDYLH 265
Query: 219 ---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 274
+V+RD+K EN + D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 266 SEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 275 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ AK
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 378
Query: 334 FVKKLLVKDPRARLTAAQA-----LSHPW 357
+ LL KDP+ RL + H +
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 5e-39
Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 45/299 (15%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPI-AVEDVKREVKI 149
+RY LG GQF Y A DK VA+KKI + K + A+ RE+K+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKL 65
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ L+ H N++ +AF + + + + E L+ I+ T + L
Sbjct: 66 LQELS-HPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 268
+ H H ++HRD+KP N L E+ LK DFGL+ F P + + V + +Y
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYR 179
Query: 269 APEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTE----DGIFKEV--------- 312
APE+L R G D+W++G I LL R PF ++ IF+ +
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238
Query: 313 -LRNKPDFRR-KPW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ + PD+ K + + + D ++ L + +P AR+TA QAL +
Sbjct: 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 7e-39
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 19/268 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A K GD AVK ++K+ ++ VE E +IL H + +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGL 220
+ F+ + ++ ME GG+L+ I +K R+ E A +++ A H G+
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEII-SALMFLHDKGI 145
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
++RD+K +N L + K DFG+ + I G G+ Y+APE+L+ G
Sbjct: 146 IYRDLKLDNVLLDH---EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 338
P D W++GV+ Y +LCG PF + ED +F+ +L ++ + + A +K
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGILKSF 258
Query: 339 LVKDPRARL-----TAAQAL-SHPWVRE 360
+ K+P RL A+ HP+ +E
Sbjct: 259 MTKNPTMRLGSLTQGGEHAILRHPFFKE 286
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 8e-39
Identities = 89/326 (27%), Positives = 132/326 (40%), Gaps = 66/326 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK---REVKILQ 151
RY K LG G G + A D RVA+KKI VK RE+KI++
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ------SVKHALREIKIIR 63
Query: 152 ALAGHENVVKFYNAF--------------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
L H+N+VK + + N VYI E E L +L +
Sbjct: 64 RL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGP--LL 118
Query: 198 EKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255
E+ A + + Q+LR ++H ++HRD+KP N + ED LK DFGL+ + P
Sbjct: 119 EEHARLFMYQLLR--GLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPH 174
Query: 256 KKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------W 301
+ + + +Y +P +L D+W+ G I +L G+ F
Sbjct: 175 YSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234
Query: 302 DK--------TEDGI------FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDP 343
E+ +RN KP P IS A DF++++L P
Sbjct: 235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP 294
Query: 344 RARLTAAQALSHPWVREGGDASEIPI 369
RLTA +ALSHP++ + PI
Sbjct: 295 MDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 150 bits (379), Expect = 8e-39
Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 25/335 (7%)
Query: 35 RRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDF 94
N + + ++ Q+ + TK ++ + + G R DF
Sbjct: 285 EYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLT-DF 343
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ +LG G FG ++ K + AVK ++K+ +I VE E ++L
Sbjct: 344 N----FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ + ++ F+ + +Y ME GG+L+ I ++ R+ E A ++
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEI--AIGL 455
Query: 215 CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
L G+++RD+K +N + S + +K DFG+ + I G + G+ Y+APE
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPE 512
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKE 568
Query: 331 AKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 360
A K L+ K P RL H + R
Sbjct: 569 AVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-38
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 43/296 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G Y A D G VA+K+I + +P A+ RE+ +L+ L
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAI----REISLLKEL 76
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V + + + + E E L ++L + + + + + Q+LR A
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
CH H ++HRD+KP+N L S D +LK DFGL+ F P + + V + +Y AP+V
Sbjct: 134 HCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----------LRNK 316
L +K D+WSIG I ++ G+ F T+ IF + ++
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 317 PDFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P ++ P D + +L DP R++A A++HP+ ++
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-38
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 20/268 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--G 219
++ F+ + +Y ME GG+L+ I ++ R+ E A ++ L G
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEI--AIGLFFLQSKG 141
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS- 277
+++RD+K +N + S + +K DFG+ + I G + G+ Y+APE++ +
Sbjct: 142 IIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY 198
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 254
Query: 338 LLVKDPRARLTAAQA-----LSHPWVRE 360
L+ K P RL H + R
Sbjct: 255 LMTKHPGKRLGCGPEGERDIKEHAFFRY 282
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 2e-38
Identities = 86/349 (24%), Positives = 140/349 (40%), Gaps = 69/349 (19%)
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
H + ++ + F D RYT +G G +G A D N RVA
Sbjct: 4 HHHMAAAAAAGPEMV---RGQVF----DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVA 56
Query: 126 VKKIE--KNKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIA 175
+KKI +++ + RE+KIL HEN++ + E VYI
Sbjct: 57 IKKISPFEHQT-------YCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIV 108
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFK 233
+L E L ++L K + + Q+LR ++H ++HRD+KP N L
Sbjct: 109 QDLMETD--LYKLL--KTQHLSNDHICYFLYQILR--GLKYIHSANVLHRDLKPSNLL-- 160
Query: 234 SAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIG 287
LK DFGL+ P V + +Y APE++ + D+WS+G
Sbjct: 161 -LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 288 VITYILLCGRRPF--------WDK--------TEDGIF-------KEVLRNKPDFRRKPW 324
I +L R F + +++ + + L + P + PW
Sbjct: 220 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 279
Query: 325 ----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P+ + A D + K+L +P R+ QAL+HP++ + D S+ PI
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 2e-38
Identities = 66/328 (20%), Positives = 120/328 (36%), Gaps = 74/328 (22%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREV 147
++ IGK G +A K G+ V V++I N+M+ ++ E+
Sbjct: 25 GCYELLTVIGK--GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMV-----TFLQGEL 77
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+ + H N+V + F DN +++ G D I E A +++
Sbjct: 78 HVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136
Query: 208 MLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK------- 257
+L+ A ++H G VHR +K + L D + + + I G++
Sbjct: 137 VLK--ALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMISHGQRQRVVHDF 191
Query: 258 FQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI-LLCGRRPFWD----------- 302
+ V +++PEVL++ +SD++S+G IT L G PF D
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG-ITACELANGHVPFKDMPATQMLLEKL 250
Query: 303 -------------------------KTEDGIFKEVLRNKPDFRRKPWPSI------SNSA 331
G+ + + P PS S
Sbjct: 251 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF 310
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVR 359
FV++ L ++P AR +A+ L+H + +
Sbjct: 311 HHFVEQCLQRNPDARPSASTLLNHSFFK 338
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-38
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 21/265 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--G 219
AF+ + + ME GGEL + ++ +TE+ A ++ V+A +LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEI--VSALEYLHSRD 125
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS- 277
+V+RD+K EN + D +K TDFGL + I G + G+ Y+APEVL+
Sbjct: 126 VVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 337
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 338 LLVKDPRARLTAAQA-----LSHPW 357
LL KDP+ RL + + H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRF 263
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 3e-38
Identities = 80/325 (24%), Positives = 136/325 (41%), Gaps = 67/325 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+RY K +G G G A D VA+KK+ + N+ K RE+
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-------HAKRAYRELV 113
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+++ + H+N++ N F E+ VY+ MEL + L +++ + + +
Sbjct: 114 LMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQME---LDHERMS 167
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++ QML H G++HRD+KP N + K D +LK DFGL+ V
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 263 GSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------TE 305
+ YY APEV L D+WS+G I ++ + F W+K
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 306 DGIFK------EVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKDP 343
+ + K + N+P + +P + ++ A+D + K+LV DP
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 344
Query: 344 RARLTAAQALSHPWVREGGDASEIP 368
R++ AL HP++ D +E+
Sbjct: 345 AKRISVDDALQHPYINVWYDPAEVE 369
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 4e-38
Identities = 59/323 (18%), Positives = 113/323 (34%), Gaps = 56/323 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVK--- 144
YT+ + + G +G D G VA+K++ K
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 145 REVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 199
RE+++L H N++ + F + +Y+ EL L +++ + + +
Sbjct: 78 REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQ 134
Query: 200 DAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
+ +L LH G+VHRD+ P N L +++ + DF L+
Sbjct: 135 HIQYFMYHILL--GLHVLHEAGVVHRDLHPGNIL---LADNNDITICDFNLAREDTADAN 189
Query: 258 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW-------------- 301
V +Y APE++ + D+WS G + + R+ +
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQLNKIVE 248
Query: 302 ------DKTEDGIFKEVLRN-----KPDFRRKPW----PSISNSAKDFVKKLLVKDPRAR 346
+ R+ + + W P+ A D + K+L +P+ R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 347 LTAAQALSHPWVREGGDASEIPI 369
++ QAL HP+ D ++
Sbjct: 309 ISTEQALRHPYFESLFDPLDLTE 331
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 143 bits (361), Expect = 4e-38
Identities = 85/376 (22%), Positives = 144/376 (38%), Gaps = 83/376 (22%)
Query: 57 AKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVAT 116
K ++L+ + Q+ +R + ++ D DF++ I +L G G G + +
Sbjct: 1 GKKLEELELDEQQR---KRLEAFLTQKQKVGELKDDDFEK---ISEL-GAGNGGVVFKVS 53
Query: 117 DKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174
K +G +A K I E I + RE+++L +V FY AF D + I
Sbjct: 54 HKPSGLVMARKLIHLEIKPAIR----NQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 108
Query: 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFL 231
ME +GG L + KK R E+ V +++ +L ++HRD+KP N L
Sbjct: 109 CMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIK--GLTYLREKHKIMHRDVKPSNIL 164
Query: 232 FKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVLKRKS-GPESDVWSI 286
S E +K DFG+S G+ + VG+ Y++PE L+ +SD+WS+
Sbjct: 165 VNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216
Query: 287 GVITYILLCGRRPF--------------------WDKTEDGIFKEVLRNKPDFRRKPWPS 326
G+ + GR P + NK +P +
Sbjct: 217 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA 276
Query: 327 I--------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366
I S +DFV K L+K+P R Q + H +++ +
Sbjct: 277 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDA 333
Query: 367 IPIDISVLNNMRQFVK 382
+D ++
Sbjct: 334 EEVD------FAGWLC 343
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 5e-38
Identities = 90/340 (26%), Positives = 137/340 (40%), Gaps = 74/340 (21%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAV 140
KR + + + + LLG G +G AT K G+ VA+KKIE +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL------ 51
Query: 141 EDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKK 192
RE+KIL+ HEN++ +N E+ N VYI EL + L R+++ +
Sbjct: 52 -FALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQ 107
Query: 193 DSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250
++ + Q LR A LH ++HRD+KP N L + LK DFGL+
Sbjct: 108 M--LSDDHIQYFIYQTLR--AVKVLHGSNVIHRDLKPSNLL---INSNCDLKVCDFGLAR 160
Query: 251 FIKPGKKFQDIVGSA-----------YYVAPEVL--KRKSGPESDVWSIGVITYILLCGR 297
I +Y APEV+ K DVWS G I L R
Sbjct: 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Query: 298 --------------------RPFWDKTEDGIF----KEVLRNKPDFRRKPW----PSISN 329
P D I +E +++ P + P P ++
Sbjct: 221 PIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP 280
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 281 KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 6e-38
Identities = 57/336 (16%), Positives = 106/336 (31%), Gaps = 79/336 (23%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAV------------KKIEKNKMIL----- 136
+ + + +G G FG + A +K + A+ +K+ + L
Sbjct: 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 63
Query: 137 --------------------------------------PIAVEDVKREVKILQALAGHEN 158
P ++ +++ + + +N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKN 122
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHL 217
V Y+YI M+LC L D + + E + + Q+ H
Sbjct: 123 TVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------DFIKPGKKFQDIVGS 264
GL+HRD+KP N F D +K DFGL + VG+
Sbjct: 183 KGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
Y++PE + + + D++S+G+I + LL ++ I +V K
Sbjct: 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--IITDVRNLKFP---LL 294
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ V+ +L P R A + +
Sbjct: 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 6e-38
Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 52/305 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPI-AVEDVKREVKILQ 151
++ + LG+G + Y +K G VA+K++ K+ P A+ RE+ +++
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAI----REISLMK 58
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCE---GGELLDRILAKKDSRYTEKDAAVVVRQM 208
L HEN+V+ Y+ +N + + E + + R + Q+
Sbjct: 59 ELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 267
L+ A CH + ++HRD+KP+N L + LK DFGL+ F P F V + +Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 268 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK----------- 310
AP+VL R D+WS G I ++ G+ F + IF
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234
Query: 311 --EVLRN-KPDFRRKP------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
L P+ +++P + + DF+ LL +P RL+A QAL H
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294
Query: 356 PWVRE 360
PW E
Sbjct: 295 PWFAE 299
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 6e-38
Identities = 85/346 (24%), Positives = 138/346 (39%), Gaps = 62/346 (17%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
H + R T +T + + RY +G G +G A D G RV
Sbjct: 2 AHHHHHHSQERPTFYRQELNKTIW----EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 57
Query: 125 AVKKIEK---NKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF------EDDNYV 172
AVKK+ + + + K RE+++L+ + HENV+ + F E+ N V
Sbjct: 58 AVKKLSRPFQSII-------HAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDV 109
Query: 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 232
Y+ L L+ I+ K + T+ ++ Q+LR H ++HRD+KP N
Sbjct: 110 YLVTHLMGAD--LNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA- 164
Query: 233 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVIT 290
ED LK DFGL+ + V + +Y APE++ D+WS+G I
Sbjct: 165 --VNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 291 YILLCGR-----------------------RPFWDKTEDGIFKEVLRNKPDFRRKPW--- 324
LL GR K + +++ + +
Sbjct: 221 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV 280
Query: 325 -PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 281 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 7e-38
Identities = 59/271 (21%), Positives = 104/271 (38%), Gaps = 40/271 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMIL-----PIAVEDVKREVK 148
+Y + + HG G+ Y+A D+ NG V +K L A E +
Sbjct: 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLK-------GLVHSGDAEAQAMAMAERQ 131
Query: 149 ILQALAGHENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAV 203
L + H ++V+ +N E + YI ME G L + +A
Sbjct: 132 FLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIA 186
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L + H GLV+ D+KPEN + + LK D G F + G
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAV---SRINSFGYLYG 239
Query: 264 SAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
+ + APE+++ +D++++G L +G + + L P
Sbjct: 240 TPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTR-----NGRYVDGLPEDD-----P 289
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+S +++ + DPR R T A+ +S
Sbjct: 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 9e-38
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 23/266 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA AVK ++K ++ + + E +L H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--G 219
+ +F+ + +Y ++ GGEL + +++ + E A ++ +A +LH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEI--ASALGYLHSLN 159
Query: 220 LVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+V+RD+KPEN L DS + TDFGL + I+ G+ Y+APEVL ++
Sbjct: 160 IVYRDLKPENILL-----DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
D W +G + Y +L G PF+ + ++ +L + P+I+NSA+ +
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLL 270
Query: 336 KKLLVKDPRARL----TAAQALSHPW 357
+ LL KD RL + SH +
Sbjct: 271 EGLLQKDRTKRLGAKDDFMEIKSHVF 296
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-37
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 10/262 (3%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVNSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+E + + + + L GG+L I + + E A ++ + H +V
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
+RD+KPEN L ++ +D GL+ + G+ + VG+ Y+APEV+K +
Sbjct: 309 YRDLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W++G + Y ++ G+ PF + + +EV R + + S A+ +LL
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 341 KDPRARL-----TAAQALSHPW 357
KDP RL +A + HP
Sbjct: 426 KDPAERLGCRGGSAREVKEHPL 447
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-37
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 61/320 (19%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+ R+ + ++ G G FG + +K+ G VA+KK+ ++ RE+
Sbjct: 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-------FRNREL 67
Query: 148 KILQALA--GHENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
+I+Q LA H N+V+ + F D Y+ + ME + L R R
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVA 125
Query: 199 KDAAVV---VRQMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253
++ + Q++R HL + HRD+KP N L + D +LK DFG + +
Sbjct: 126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFGSAKKLS 183
Query: 254 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---- 307
P + + S YY APE++ + D+WS+G I ++ G F + ++
Sbjct: 184 PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF--RGDNSAGQL 241
Query: 308 --IFKEVL-----------------RNKPDFRRKPW--------PSISNSAKDFVKKLLV 340
I + VL + + + PW + A D + LL
Sbjct: 242 HEIVR-VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 341 KDPRARLTAAQALSHPWVRE 360
P R+ +AL HP+ E
Sbjct: 301 YLPEERMKPYEALCHPYFDE 320
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-37
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 33/278 (11%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-------PIAVEDVKRE 146
RY +G++LG G ++A D + VAVK +L P +RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-------VLRADLARDPSFYLRFRRE 62
Query: 147 VKILQALAG--HENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKD 200
Q A H +V Y+ E + YI ME +G L D + + T K
Sbjct: 63 A---QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKR 117
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL----SDFIKPGK 256
A V+ + H +G++HRD+KP N + +++K DFG+ +D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVT 174
Query: 257 KFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 315
+ ++G+A Y++PE SDV+S+G + Y +L G PF + + + +R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P +S V K L K+P R A +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-37
Identities = 77/318 (24%), Positives = 134/318 (42%), Gaps = 62/318 (19%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
Y + +G G +G A D G +VA+KK+ + +++ K RE++
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-------FAKRAYRELR 76
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+L+ + HENV+ + F +D Y+ M L +++ K + E
Sbjct: 77 LLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLM--KHEKLGEDRIQ 131
Query: 203 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+V QML+ ++H G++HRD+KP N ED LK DFGL+
Sbjct: 132 FLVYQMLK--GLRYIHAAGIIHRDLKPGNLA---VNEDCELKILDFGLARQADSEMT--G 184
Query: 261 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR--------------------- 297
V + +Y APEV+ + D+WS+G I ++ G+
Sbjct: 185 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244
Query: 298 --RPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 351
F + + K ++ P+ +K + + S A + ++K+LV D R+TA +
Sbjct: 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304
Query: 352 ALSHPWVREGGDASEIPI 369
AL+HP+ D + P
Sbjct: 305 ALAHPYFESLHDTEDEPQ 322
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-37
Identities = 81/326 (24%), Positives = 133/326 (40%), Gaps = 67/326 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+RY K +G G G A D VA+KK+ + N+ K RE+
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-------HAKRAYRELV 76
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+++ + H+N++ N F E+ VYI MEL + L +++ + +
Sbjct: 77 LMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ---MELDHERMS 130
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++ QML H G++HRD+KP N + K D +LK DFGL+ V
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 263 GSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------TE 305
+ YY APEV L D+WS+G I ++ G F W+K
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 306 DGIFK------EVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKDP 343
+ + K + N+P + + + ++ A+D + K+LV D
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 344 RARLTAAQALSHPWVREGGDASEIPI 369
R++ +AL HP++ D SE
Sbjct: 308 SKRISVDEALQHPYINVWYDPSEAEA 333
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-37
Identities = 84/424 (19%), Positives = 140/424 (33%), Gaps = 113/424 (26%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLL 104
++H+ Q + + Q + ++ P D RY I L+
Sbjct: 2 SSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLI 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------REVKILQALAGHEN 158
G G +G+ A DK VA+KKI + ED+ RE+ IL L H++
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKILR-------VFEDLIDCKRILREIAILNRL-NHDH 113
Query: 159 VVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
VVK + E + +Y+ +E+ + ++ + TE ++ +L
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLF-RTPVYLTELHIKTLLYNLLVGVK 170
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA-------- 265
H G++HRD+KP N L +D S+K DFGL+ + + + +
Sbjct: 171 YVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 266 --------------------YYVAPEVL--KRKSGPESDVWSIGVI----------TYIL 293
+Y APE++ + DVWSIG I
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287
Query: 294 LCGRRPF--------------------------------------------WDKTEDGIF 309
R P + E
Sbjct: 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDA 347
Query: 310 KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
K +R P P+ S A +K++LV +P R+T + L+HP+ +E A
Sbjct: 348 KRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE 407
Query: 366 EIPI 369
Sbjct: 408 VETN 411
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 8e-37
Identities = 71/335 (21%), Positives = 147/335 (43%), Gaps = 38/335 (11%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-----KL 103
H H H + + T ++ +G+ + + + ++
Sbjct: 5 HHHHHHD-----YDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRV 59
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G + + K A++ ++K + ++ V+ E + + + H +V +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVH 222
+ F+ ++ ++ +E GG+L+ + ++ + E+ A ++ +A H G+++
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEIS-LALNYLHERGIIY 176
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+ + G
Sbjct: 177 RDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 281 SDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
D W++GV+ + ++ GR PF TED +F+ +L + R S+S A
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 289
Query: 332 KDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 360
+K L KDP+ RL T + HP+ R
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 8e-37
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 29/274 (10%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
++LG G +G + T G A+K ++K ++ K E IL+ H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHP 81
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V AF+ +Y+ +E GGEL ++ +++ + E A + ++ A HL
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAEI--SMALGHL 137
Query: 218 H--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
H G+++RD+KPEN + + +K TDFGL + I G G+ Y+APE+
Sbjct: 138 HQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
L R D WS+G + Y +L G PF + ++L+ K + P P ++ A
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEA 248
Query: 332 KDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 360
+D +KKLL ++ +RL A +HP+ R
Sbjct: 249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 9e-37
Identities = 76/303 (25%), Positives = 121/303 (39%), Gaps = 49/303 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPI-AVEDVKREVKIL 150
RY +G G +G Y A D +G VA+K + LPI V REV +L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV----REVALL 65
Query: 151 QAL--AGHENVVKFY-----NAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDA 201
+ L H NVV+ + + + V + E + LD+ +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA---PPPGLPAETI 122
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPV 179
Query: 262 VGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV---- 312
V + +Y APEVL + D+WS+G I + + F +E IF +
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 313 ------LRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ P P P + S + ++L +P R++A +AL H +
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 358 VRE 360
+ +
Sbjct: 300 LHK 302
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 9e-37
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K A+K ++K + ++ V+ E + + + H +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGL 220
++ F+ ++ ++ +E GG+L+ + ++ + E+ A ++ +A H G+
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEIS-LALNYLHERGI 131
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+ + G
Sbjct: 132 IYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG 188
Query: 279 PESDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLRNKPDFRRKPWPSISN 329
D W++GV+ + ++ GR PF TED +F+ +L + R S+S
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSV 244
Query: 330 SAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 360
A +K L KDP+ RL T + HP+ R
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-36
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 11/151 (7%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
A L +EE+ L++ F ID D +G+I+ +E++ L + + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDK 59
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
G +D+ EF+AAT+H+++LE + +L +AF FD D G+IT +E++ GL
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE----NLV--SAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 512 K-GSIDPLLEEADIDKDGRISLSEFRRLLRT 541
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 4e-13
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L+ EE +L F D D +G I+L+E++QA L + + ++++ ID + DG
Sbjct: 78 LEREE--NLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDMIKEIDQDNDGQ 132
Query: 458 VDFSEFVA----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 509
+D+ EF A + + +LR A D + I H
Sbjct: 133 IDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR--DALGLVDNGSNQVIEGYFKHHHH 186
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 143 bits (361), Expect = 2e-36
Identities = 71/333 (21%), Positives = 129/333 (38%), Gaps = 29/333 (8%)
Query: 44 DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-- 101
+ H + Q +Q + Q I K T F K+ + +
Sbjct: 130 EHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMN 189
Query: 102 -----KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+++G G FG Y G A+K ++K ++ + E +L ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 157 EN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V AF + + ++L GG+L + + ++E D +++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 307
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H +V+RD+KP N L E ++ +D GL+ KK VG+ Y+APEVL+
Sbjct: 308 MHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQ 363
Query: 275 RKSG--PESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLRNKPDFRRKPWPSISN 329
+ +D +S+G + + LL G PF K + I + L + S S
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSP 419
Query: 330 SAKDFVKKLLVKDPRARL-----TAAQALSHPW 357
+ ++ LL +D RL A + P+
Sbjct: 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 2e-36
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 29/270 (10%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K+LG G FG ++ + A+K ++K + K E IL H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK-ATLKVRDRVRTKMERDILVE-VNHPF 87
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D + ++ A HLH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAEL--ALALDHLH 143
Query: 219 --GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
G+++RD+KPEN L D +K TDFGLS + I KK G+ Y+APEV+
Sbjct: 144 SLGIIYRDLKPENILL-----DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
R+ +D WS GV+ + +L G PF K +L+ K +S A+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254
Query: 333 DFVKKLLVKDPRARL-----TAAQALSHPW 357
++ L ++P RL + H +
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-36
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 25/271 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLH- 218
AFE + + M + GG++ I + + + + E A Q+ V+ HLH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGLEHLHQ 307
Query: 219 -GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+++RD+KPEN L D +++ +D GL+ + K + G+ ++APE+L +
Sbjct: 308 RNIIYRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSISNSA 331
D +++GV Y ++ R PF + E + + VL + K S ++
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPAS 420
Query: 332 KDFVKKLLVKDPRARL-----TAAQALSHPW 357
KDF + LL KDP RL + +HP
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 4e-36
Identities = 82/338 (24%), Positives = 155/338 (45%), Gaps = 44/338 (13%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK-----DFDRRYTIG 101
H H H+ + + + + T G+ + +F+ +
Sbjct: 4 HHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFE----LL 59
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
K+LG G +G ++ + G A+K ++K ++ E + E ++L+ +
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V + AF+ + +++ ++ GGEL + + R+TE + + V ++ V A HL
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGEI--VLALEHL 175
Query: 218 H--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS--DFIKPGKKFQDIVGSAYYVAPE 271
H G+++RD+K EN L DS+ + TDFGLS ++ D G+ Y+AP+
Sbjct: 176 HKLGIIYRDIKLENILL-----DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 272 VLKRKS---GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRRKPW 324
+++ D WS+GV+ Y LL G PF ++ I + +L+++P + P
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---P- 286
Query: 325 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 357
+S AKD +++LL+KDP+ RL A + H +
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 131 bits (330), Expect = 1e-35
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 20/174 (11%)
Query: 387 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEE---------MRQALAKDLPWK 437
++A++ + + + FD +D++ NG I+L+E + A K
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKF 492
+ V + + F +F+ AT + + ++ A F+ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 493 DIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
D D G IT +E + +G+ S + D+D G + + E R
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-10
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 379 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 437
QF+ + +L L+ A FD D D +G+I+L+E + K
Sbjct: 87 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG-KISGIS 145
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479
+ + D + G +D E H+ D E
Sbjct: 146 PSQEDCEATFRHCDLDNAGDLDVDEMTR--QHLGFWYTLDPE 185
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-35
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 31/275 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQALA 154
K +G G FG + + VA+K + + + + ++ +REV I+ L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-A 213
H N+VK Y + + ME G+L L K V +R ML +A
Sbjct: 82 -HPNIVKLYGLMHNP--PRMVMEFVPCGDLYH-RLLDKAHPIKWS---VKLRLMLDIALG 134
Query: 214 ECHLHG----LVHRDMKPENFLFKSAKEDS--SLKATDFGLSDFIKPGKKFQDIVGSAYY 267
++ +VHRD++ N +S E++ K DFGLS ++G+ +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS--GLLGNFQW 192
Query: 268 VAPEVLKRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+APE + + ++D +S +I Y +L G PF + + I + + R
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR---- 248
Query: 325 PSISNSAKDFVKKLLVK----DPRARLTAAQALSH 355
P+I ++ ++ DP+ R + +
Sbjct: 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 76/346 (21%), Positives = 138/346 (39%), Gaps = 86/346 (24%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
++Y++GK LG G FG D +G R A+KK+ ++ RE+ I++ L
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLD 58
Query: 155 GHENVVKFYNAF--------------------------------------EDDNYVYIAM 176
H N++K + F + Y+ + M
Sbjct: 59 -HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 177 ELCEGGELLDRIL---AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233
E + L ++L + ++ + Q+ R H G+ HRD+KP+N L
Sbjct: 118 EYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 234 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITY 291
S +D++LK DFG + + P + + S +Y APE++ + P D+WSIG +
Sbjct: 176 S--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 292 ILLCGRRPFWDKTEDG------IFKEVL-----------------RNKPDFRRKPW---- 324
L+ G+ F E I + ++ P + K W
Sbjct: 234 ELILGKPLF--SGETSIDQLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKIL 290
Query: 325 PSISNS-AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + S A D ++++L +P R+ +A++HP+ ++ E +
Sbjct: 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-35
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 39/267 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+ H N
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR-HVN 81
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
++ F I + CEG L L ++++ ++++ +A +
Sbjct: 82 ILLFMGYSTAPQL-AIVTQWCEGSSLYH-HLHASETKFEM-------KKLIDIARQTARG 132
Query: 216 ----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYV 268
H ++HRD+K N ED+++K DFGL+ +F+ + GS ++
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 269 APEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKP 323
APEV++ + SDV++ G++ Y L+ G+ P+ + D I + V R
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG---SLSPD 246
Query: 324 WPSISNSAKDFVKKLLVK----DPRAR 346
+ ++ +K+L+ + R
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDER 273
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-35
Identities = 63/267 (23%), Positives = 106/267 (39%), Gaps = 24/267 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-------PIAVEDVKREVKI 149
Y + +L+G G G Y A D VA+K ++ P+ ++RE +
Sbjct: 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALK-------LMSETLSSDPVFRTRMQREART 87
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
L +VV ++ E D +Y+ M L G +L + ++ A +VRQ+
Sbjct: 88 AGRLQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRAVAIVRQIG 144
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYY 267
H G HRD+KPEN L D DFG++ K Q + VG+ YY
Sbjct: 145 SALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYY 201
Query: 268 VAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APE + +D++++ + Y L G P+ + + + P P
Sbjct: 202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVR-PG 260
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQAL 353
I + + + + K+P R L
Sbjct: 261 IPVAFDAVIARGMAKNPEDRYVTCGDL 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 6e-35
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 44/272 (16%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
IG+L+G G+FG Y + +G+ VA++ I+ + ++ KREV + HEN
Sbjct: 36 EIGELIGKGRFGQVYHG--RWHGE-VAIRLIDIERDN-EDQLKAFKREVMAYRQTR-HEN 90
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
VV F A ++ I LC+G L ++ + ++A E
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDV-------NKTRQIAQEIVKG 142
Query: 216 ----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGKKFQDIVGSA 265
H G++H+D+K +N + ++ + TDFGL + K + G
Sbjct: 143 MGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 266 YYVAPEVLKRKSGPE----------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 315
++APE++++ S SDV+++G I Y L PF + + I ++
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258
Query: 316 -KPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 346
KP+ + D + + R
Sbjct: 259 MKPNLSQIGMGK---EISDILLFCWAFEQEER 287
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 9e-35
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 47/301 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQA 152
+Y +G G +G + A D K G VA+K++ + + +P+ + REV +L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI----REVAVLRH 67
Query: 153 L--AGHENVVKFY-----NAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAV 203
L H NVV+ + + + + + + E + LD++ + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV---PEPGVPTETIKD 124
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVV 181
Query: 264 SAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK-------- 310
+ +Y APEVL + D+WS+G I + + F ++ I
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 311 -----------EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
K I KD + K L +P R++A ALSHP+ +
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 360 E 360
+
Sbjct: 302 D 302
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-34
Identities = 35/261 (13%), Positives = 68/261 (26%), Gaps = 36/261 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ RY + G + A D A +VA+ ++ ++ +++ L +
Sbjct: 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI- 88
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
V + + + E GG L + D+ + A ++ + A
Sbjct: 89 DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADA 144
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H G+ P D + +
Sbjct: 145 AHRAGVALSIDHPSRVRV---SIDGDVVLAYPA-------------------TMPDA--- 179
Query: 275 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW---PSISNSA 331
P+ D+ IG Y LL R P + R+ +P I
Sbjct: 180 ---NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236
Query: 332 KDFVKKLLVKDPRARLTAAQA 352
+ + D R +
Sbjct: 237 SAVAARSVQGDGGIRSASTLL 257
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-34
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL--------AKD 433
+Y R + L + L+ L +FD D+D +G + ++E+ A D
Sbjct: 14 RYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATD 73
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR-----SQAA 488
+ V + ++V A + E + S +
Sbjct: 74 EQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSY 133
Query: 489 FEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540
++ D D DG + +EL+ + E+AD DK G++ +E L R
Sbjct: 134 YDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFR 189
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 7e-07
Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 15/81 (18%)
Query: 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRM---------------HTGLKGSIDPLLEEA 522
K R F+ FD+D DG + +E+ ++ ++
Sbjct: 31 HPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHK 90
Query: 523 DIDKDGRISLSEFRRLLRTAS 543
++ + ++ R +
Sbjct: 91 GVEPVNGLLREDWVEANRVFA 111
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-34
Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 36/261 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ +++G G FG A + VA+K+IE + E++ L + H N
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESER-----KAFIVELRQLSRVN-HPN 62
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHL 217
+VK Y A + V + ME EGG L +L + AA + L+ + +L
Sbjct: 63 IVKLYGACLNP--VCLVMEYAEGGSL-YNVLHGAEPLP-YYTAAHAMSWCLQCSQGVAYL 118
Query: 218 H-----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
H L+HRD+KP N L + LK DFG + I+ + GSA ++APEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEV 174
Query: 273 LKRKSGPE-SDVWSIGVITYILLCGRRPFWD--KTEDGIFKEVLRNKPDFRRKPWPSISN 329
+ + E DV+S G+I + ++ R+PF + I V R P +
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT---R----PPLIK 227
Query: 330 SAKDFVKKLLV----KDPRAR 346
+ ++ L+ KDP R
Sbjct: 228 NLPKPIESLMTRCWSKDPSQR 248
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-34
Identities = 87/363 (23%), Positives = 130/363 (35%), Gaps = 82/363 (22%)
Query: 71 TNSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKA 119
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 63 LNAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHK 120
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYI 174
VA+K + K A E++IL+ L + NV+ F N++ +
Sbjct: 121 VHQHVALKMVRNEKRFHRQA----AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176
Query: 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234
EL L + I K ++ +L+ H + ++H D+KPEN L K
Sbjct: 177 TFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ 235
Query: 235 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYIL 293
S +K DFG S + ++ + S +Y APEV L + G D+WS+G I L
Sbjct: 236 QG-RSGIKVIDFGSSCYE--HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAEL 292
Query: 294 LCGR-----------------------------------------RPFWDKTEDGIFKEV 312
L G P + V
Sbjct: 293 LTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSV 352
Query: 313 LRNKPDFRRKPWPSISNSA--------------KDFVKKLLVKDPRARLTAAQALSHPWV 358
+ N RR S DF+K+ L DP R+T QAL HPW+
Sbjct: 353 VLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
Query: 359 REG 361
R
Sbjct: 413 RRR 415
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 4e-34
Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 26/187 (13%)
Query: 378 RQFVKYSRLKQFALRALASTLDD----EELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433
+ K ++ ++ A + + E + F D ++ G + +E+ +
Sbjct: 18 DKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEV 77
Query: 434 LPWKLKESRVLEILQ---------AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484
L SRV +I + G DF EF+ L + + + L
Sbjct: 78 LKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFF----ELT 133
Query: 485 SQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 537
F++ D + + EE + L +E D + G ++ EF
Sbjct: 134 --VMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Query: 538 LLRTASI 544
+
Sbjct: 192 WASAVKL 198
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-34
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
I + +G G FG + A + +G VAVK + + V + REV I++ L H N
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLR-HPN 95
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHL 217
+V F A + I E G L +L K +R + D + VA +L
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGARE-QLDERRRLSMAYDVAKGMNYL 153
Query: 218 HG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEV 272
H +VHR++K N L + ++K DFGLS + G+ ++APEV
Sbjct: 154 HNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV 210
Query: 273 LKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
L+ + S +SDV+S GVI + L ++P+ + + V +R I +
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC---KR---LEIPRNL 264
Query: 332 KDFVKKLLVK----DPRAR 346
V ++ +P R
Sbjct: 265 NPQVAAIIEGCWTNEPWKR 283
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 8e-34
Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 33/265 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHE 157
T+ +++G G FG Y A GD VAVK + + +E+V++E K+ L H
Sbjct: 10 TLEEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECH 216
N++ + + + ME GG L +L+ K ++V +++A +
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGK-----RIPPDILVNWAVQIARGMNY 120
Query: 217 LHG-----LVHRDMKPENFL-----FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
LH ++HRD+K N L + LK TDFGL+ K G+
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-MSAAGAYA 179
Query: 267 YVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
++APEV++ + SDVWS GV+ + LL G PF + V NK
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK---LA---L 233
Query: 326 SISNSAKDFVKKLLVK----DPRAR 346
I ++ + KL+ DP +R
Sbjct: 234 PIPSTCPEPFAKLMEDCWNPDPHSR 258
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 8e-34
Identities = 80/396 (20%), Positives = 138/396 (34%), Gaps = 114/396 (28%)
Query: 67 QHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAV 126
H +S + + G + Y I L+G G +GY Y+A DK VA+
Sbjct: 2 HHHHHHSSGRENLYFQGI-KNV----HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAI 56
Query: 127 KKIEK---NKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIA 175
KK+ + + + D K RE+ IL L + +++ Y+ + +YI
Sbjct: 57 KKVNRMFEDLI-------DCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIV 108
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFK 233
+E+ + L ++ K TE+ ++ +L E +H G++HRD+KP N L
Sbjct: 109 LEIADSD--LKKLF-KTPIFLTEEHIKTILYNLLL--GENFIHESGIIHRDLKPANCL-- 161
Query: 234 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA-----------------------YYVAP 270
+D S+K DFGL+ I K + +Y AP
Sbjct: 162 -LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220
Query: 271 EVL--KRKSGPESDVWSIGVI----------TYILLCGRRPF----------------WD 302
E++ + D+WS G I R P
Sbjct: 221 ELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKV 280
Query: 303 KTEDG------IF-------------------KEVLRNKPDFRRKPW----PSISNSAKD 333
+ IF + ++ P + PSIS+ +
Sbjct: 281 HEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN 340
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
++ +L +P R+T QAL HP++++
Sbjct: 341 LLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENF 376
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 1e-33
Identities = 85/363 (23%), Positives = 137/363 (37%), Gaps = 99/363 (27%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVE 141
R D R+Y + K LG G +G + + D+ G+ VAVKKI N
Sbjct: 2 RVDR----HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST------- 50
Query: 142 DVK---REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRY 196
D + RE+ IL L+GHEN+V N ++D VY+ + E L ++ + +
Sbjct: 51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVI--RANIL 106
Query: 197 TEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
VV Q+++ +LH GL+HRDMKP N L + +K DFGLS
Sbjct: 107 EPVHKQYVVYQLIK--VIKYLHSGGLLHRDMKPSNIL---LNAECHVKVADFGLSRSFVN 161
Query: 255 GKKFQDIVGSA----------------------YYVAPEVL--KRKSGPESDVWSIGVIT 290
++ + + + +Y APE+L K D+WS+G I
Sbjct: 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL 221
Query: 291 YILLCGRRPFW------------------------DKTEDGIFKEVLRNKPDFRRKPW-- 324
+L +P + + + K ++ + +
Sbjct: 222 GEIL-CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSN 280
Query: 325 ------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 366
+ A D + KLL +P R++A AL HP+V + +E
Sbjct: 281 KRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE 340
Query: 367 IPI 369
P
Sbjct: 341 EPN 343
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-33
Identities = 73/345 (21%), Positives = 129/345 (37%), Gaps = 74/345 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D RY + + LG G F ++A D N VA+K + +K+ A + E+K+L
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA----EDEIKLL 69
Query: 151 QAL----------AGHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRY 196
Q + G +++K + F + +V + E+ G LL I +
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGI 128
Query: 197 TEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAK---EDSSLKATDFGLSD 250
+ +Q+L ++H G++H D+KPEN L + +K D G +
Sbjct: 129 PLIYVKQISKQLLL--GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 251 FIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 309
+ + + + + + Y +PEV L G +D+WS + + L+ G F
Sbjct: 187 WY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
Query: 310 K---------EVL------------------------RNKPDFRRKPWPSISNSA----- 331
K E+L RN + P +
Sbjct: 245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK 304
Query: 332 ------KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 370
DF+ +L DPR R A ++HPW+++ EI +
Sbjct: 305 DEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 7e-33
Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 18/190 (9%)
Query: 355 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 414
P V + PI S + + ++ L +T+ ++ + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 415 VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474
D++G++ + E+ +L L +++ D + +G + F EF+A +
Sbjct: 62 RDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116
Query: 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS--IDPLLEEADIDKDGR 529
E F R G + P E+ G + LL
Sbjct: 117 ----ELA----YNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAF 168
Query: 530 ISLSEFRRLL 539
L+ + +
Sbjct: 169 CDLNCWIAIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 19/106 (17%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 460
+ + + F ++G++ E+ AL + L + + + R +L + D
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPAL-QQLGFYINQ-RTSLLLHRLFARGMAFCDL 171
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID-----RDGFIT 501
+ ++A Q A++ ++ F
Sbjct: 172 NCWIAICAFAAQTRS------------AYQMIFMNPYYGPMKPFNP 205
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 1e-07
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 14/80 (17%)
Query: 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------GSIDPLLE 520
++ + + F D DR G + EL G + ++
Sbjct: 41 LLNTIPLDQYTRI----YQWFMGVDRDRSGTLEINELM--MGQFPGGIRLSPQTALRMMR 94
Query: 521 EADIDKDGRISLSEFRRLLR 540
D D +G IS EF + +
Sbjct: 95 IFDTDFNGHISFYEFMAMYK 114
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 85/327 (25%), Positives = 124/327 (37%), Gaps = 66/327 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y +G G FG + A + G +VA+KK+ E K PI A+ RE+KILQ L
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL----REIKILQLL 73
Query: 154 AGHENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
HENVV +Y+ + CE L +L+ ++T + V+
Sbjct: 74 K-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD--LAGLLSNVLVKFTLSEIKRVM 130
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 265
+ +L H + ++HRDMK N L LK DFGL+ K Q +
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQP---NR 184
Query: 266 Y--------YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK- 310
Y Y PE+L +R GP D+W G I + TE I +
Sbjct: 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
Query: 311 ------------------EVLRNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARL 347
E L +RK A D + KLLV DP R+
Sbjct: 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 348 TAAQALSHPWVREGGDASEIPIDISVL 374
+ AL+H + +P D+ +
Sbjct: 305 DSDDALNHDFFWS----DPMPSDLKGM 327
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-32
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
F IDV+ +G++S EE++ ++K E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 466 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGSIDPLLEEAD 523
+ + D + L+ ++ D+D DG +T EE+ + + +AD
Sbjct: 61 FYGSIQGQDLSDDKI-GLK--VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKAD 117
Query: 524 IDKDGRISLSEFRRLL 539
+ DG I+L EF
Sbjct: 118 ANGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 7e-11
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
DD+ L+ + +DVD +G ++ EE+ K +V E + D N D
Sbjct: 69 DLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFK-----KHGIEKVAEQVMKADANGD 121
Query: 456 GLVDFSEFVA 465
G + EF+
Sbjct: 122 GYITLEEFLE 131
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 5e-32
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 384 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 443
L S L +E+ ++ + F D++ +G + E++ A+ L ++L + +
Sbjct: 3 KNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREI 61
Query: 444 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
L+++ D L+ + +F + ++ + D ++ AF+ FD D G I+ +
Sbjct: 62 LDLIDEYDSEGRHLMKYDDFY--IVMGEKILKRDPLD-EIK--RAFQLFDDDHTGKISIK 116
Query: 504 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
LR G + + ++EE D+D DG I+ +EF + +
Sbjct: 117 NLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 9e-32
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 29/198 (14%)
Query: 362 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 421
G P+ S ++ + ++ LRA + + L F +D D + S+
Sbjct: 3 GLVPRGPLG-SHMDAVDATME-------KLRAQCLSRGASGIQGLARFFRQLDRDGSRSL 54
Query: 422 SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481
+E RQ L L L ++ + + D N G +D EF+ A
Sbjct: 55 DADEFRQGL-AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREA---- 109
Query: 482 HLRSQAAFEKFDIDRDGFITPEELR----------MHTGLKGS---IDPLLEEADI-DKD 527
+ AAF K D DG +T ++LR + +G + L+ D +KD
Sbjct: 110 VIA--AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKD 167
Query: 528 GRISLSEFRRLLRTASIS 545
G+++L+EF+ S S
Sbjct: 168 GQVTLAEFQDYYSGVSAS 185
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 80/326 (24%), Positives = 122/326 (37%), Gaps = 66/326 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D G +G G +G+ Y A K + A+K+IE I A RE+ +L+
Sbjct: 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSAC----REIALLRE 74
Query: 153 LAGHENVVKFYNAFED--DNYVYIAMELCEG--GELLDRILAKKDSRYTEK-DAAVV--- 204
L H NV+ F D V++ + E ++ A K ++ + +V
Sbjct: 75 LK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS-DFIKPGKKFQDIV 262
+ Q+L H + ++HRD+KP N L + +K D G + F P K D+
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 263 GSA---YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---------- 307
+Y APE+L R D+W+IG I LL F + ED
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253
Query: 308 ---IFK-----------------EVLRNKPDFRRKPW-------------PSISNSAKDF 334
IF E DFRR + + A
Sbjct: 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHL 313
Query: 335 VKKLLVKDPRARLTAAQALSHPWVRE 360
++KLL DP R+T+ QA+ P+ E
Sbjct: 314 LQKLLTMDPIKRITSEQAMQDPYFLE 339
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 377 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 436
M K + + L +E+ ++R+ FD D D +G+I +E++ A+ L +
Sbjct: 1 MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA-LGF 59
Query: 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 496
+ K+ + +++ ID + G +DF EF+ T+ ++ E DS + + AF FD D
Sbjct: 60 EPKKEEIKKMISEIDKDGSGTIDFEEFL--TMMTAKMGERDSRE-EIL--KAFRLFDDDN 114
Query: 497 DGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTASI 544
G IT ++LR G + + ++ EAD + D I EF R+++ S+
Sbjct: 115 SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-31
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 514
+DF EF+ + + + + L F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 515 ---IDPLLEEADIDKDGRISLSEFRRLLR 540
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 8e-31
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNL 60
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKW---HLRSQAAFEKFDIDRDGFITPEELR--MHT 509
G VDF +FV +L ++ LR AF +FD + DG I+ ELR M
Sbjct: 61 GGHVDFDDFVELM--GPKLLAETADMIGVKELR--DAFREFDTNGDGEISTSELREAMRA 116
Query: 510 GLKGS-----IDPLLEEADIDKDGRISLSEFRRLLR 540
L I+ ++ + D++ DGR+ EF R++
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 8e-31
Identities = 78/385 (20%), Positives = 136/385 (35%), Gaps = 81/385 (21%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGY-----DKDFDRRYTIGKL 103
H H H + ++ +++ V G D + + RY I L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSL 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----N 158
+G G FG A D+ + VA+K I+ K L A + EV++L+ + H+
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHDTEMKYY 117
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V F N++ + E+ L D + + +QM
Sbjct: 118 IVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 219 --GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKR 275
++H D+KPEN L + K S++K DFG S + G++ + S +Y +PEV L
Sbjct: 177 ELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLGM 233
Query: 276 KSGPESDVWSIGVITYILLCG---------------------------------RRPFWD 302
D+WS+G I + G R F++
Sbjct: 234 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFE 293
Query: 303 KTEDGIF--KEVLRNKPDFRRKPWPSISNSAK-------------------------DFV 335
K DG + K+ K +++ + N D +
Sbjct: 294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 353
Query: 336 KKLLVKDPRARLTAAQALSHPWVRE 360
++L DP+ R+ AL H + ++
Sbjct: 354 LRMLDYDPKTRIQPYYALQHSFFKK 378
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-30
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE-EIR--EAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 512 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
K + +D ++ EADID DG+++ EF +++
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 5e-15
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
D EE ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 81 DSEE--EIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 459 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
++ EFV + + + + F
Sbjct: 138 NYEEFVQ--MMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G++LG G FG T + G+ + +K++ + +EVK+++ L H N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA--EC- 215
V+KF D + E +GG L I+ DS+Y V +A+
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWS---QRVSFAKDIASGMAYL 124
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---------------KPGKKFQD 260
H ++HRD+ N L +E+ ++ DFGL+ + KK
Sbjct: 125 HSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 261 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319
+VG+ Y++APE++ R + DV+S G++ ++ D + N F
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP--RTMDFGLNVRGF 239
Query: 320 RRKPWPS 326
+ P
Sbjct: 240 LDRYCPP 246
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 400 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVL-EILQAI----- 450
D + ++ F+ ID DK+G+I+ E M + AK+ K + ++VL + L +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 451 -DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 509
+D + F+ + + + F D + D I+ +E +
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 510 GLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 540
G+ G + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-11
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 459 DFSEFVAATLHVHQLEEHDSEKW 481
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 17/80 (21%)
Query: 478 SEKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGSIDPLLEE------------ 521
S+ W + + F + D D+DG IT + +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 522 -ADIDKDGRISLSEFRRLLR 540
+ I + F ++
Sbjct: 61 LTAVAGGKGIDETTFINSMK 80
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 2e-30
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 459
+E+ ++R+ FD D D G+I ++E++ A+ L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 460 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 514
F +F+ T+ ++ E D+++ + AF+ FD D G I+ + L+ G +
Sbjct: 61 FGDFL--TVMTQKMSEKDTKE-EIL--KAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 515 -IDPLLEEADIDKDGRISLSEFRRLLR 540
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 55.9 bits (136), Expect = 1e-09
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
D +E ++ F D D+ G IS + +++ K+L L + + E++ D + DG V
Sbjct: 76 DTKE--EILKAFKLFDDDETGKISFKNLKRVA-KELGENLTDEELQEMIDEADRDGDGEV 132
Query: 459 DFSEFVA 465
EF+
Sbjct: 133 SEQEFLR 139
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-30
Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 43/267 (16%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
L G + + G+ + VK ++ D E L+ + H N
Sbjct: 13 NFLTKLNENHSGELWKG--RWQGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFS-HPN 68
Query: 159 VVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC- 215
V+ A + + + G L + + + + Q ++ A +
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ-------SQAVKFALDMA 121
Query: 216 ----HLHGL----VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
LH L + + + ED + + + + + + + + +
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADVKFSFQSPGR----MYAPAW 174
Query: 268 VAPEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
VAPE L++K +D+WS V+ + L+ PF D + I +V R
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG---LR-- 229
Query: 324 WPSISNSAKDFVKKLL----VKDPRAR 346
P+I V KL+ +DP R
Sbjct: 230 -PTIPPGISPHVSKLMKICMNEDPAKR 255
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 459 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----MHTG---- 510
DF EF+ + D E+ LR AF +D+D+DG+I+ EL M G
Sbjct: 56 DFKEFIEGVSQFSV--KGDKEQ-KLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 511 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI 544
L+ +D + AD D DGRIS EF ++ I
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 147
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-30
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 392 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 450
+A L +E+ + + FD + ++GSIS +E+ + + L + E++ +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEV 64
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---M 507
D + G VDF EF+ + + + + L F FD + DG+I EEL+
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 122
Query: 508 HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
TG + I+ L+++ D + DGRI EF ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 393 ALASTLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
S L ++ L F + + +G +S +++ L + L + +S + +++ D
Sbjct: 2 GDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIIL-EVLGIQQTKSTIRQLIDEFD 60
Query: 452 CNTDGLVDFSEFVAATLH--VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 506
+G +DF F ++ ++ LR AF +D + +G+I+ + +R
Sbjct: 61 PFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ-ELR--EAFRLYDKEGNGYISTDVMREIL 117
Query: 507 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
S +D +++E D D G + EF ++
Sbjct: 118 AELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-29
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
+G +DF EF+ +L +++E DSE+ L AF+ FD D +G I+ ELR + G
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEE-ELI--EAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 512 KGS---IDPLLEEADIDKDGRISLSEFRRLL 539
K + +D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-29
Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 20/163 (12%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCN 453
+ + + F+ +DV+ NG ISL+EM + + L ++++ +
Sbjct: 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 69
Query: 454 TDGL-----VDFSEFVAATLHV-----HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
G+ D+ ++ + + +++ + A F+ D D++G IT +
Sbjct: 70 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 129
Query: 504 ELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
E + G+ S + DID+ G++ + E R
Sbjct: 130 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-11
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)
Query: 379 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 437
+++ + +L L A FD +D D+NG+I+L+E + K
Sbjct: 83 AYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGII 141
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482
E + D + G +D E L + EK +
Sbjct: 142 QSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLY 186
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 16/78 (20%)
Query: 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----------HTGLKGSIDPLLEEA 522
+ D+ +W R + F D++ +G I+ +E+ T + EA
Sbjct: 7 SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEA 66
Query: 523 DIDKDG-----RISLSEF 535
G +
Sbjct: 67 FFGGAGMKYGVETDWPAY 84
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 9e-29
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 15/165 (9%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--------DLPWKLKESR 442
+ + + L ++ + +DV +G IS E+ + +
Sbjct: 1 MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQE 60
Query: 443 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH-LRSQAAFEKFDIDRDGFIT 501
L + + + E + + + ++S ++ D D+DG+++
Sbjct: 61 FLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVS 120
Query: 502 PEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 540
E + G D +K+G+IS EF +
Sbjct: 121 LPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-28
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
+ L+ L + ++ L +F ++D +NG++S E+ ++ + L +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN-PLGD- 64
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK----------WHLRSQAAFEK 491
I+ A + V+F F+ H +E+++ K + AF
Sbjct: 65 ---RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRL 121
Query: 492 FDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 540
+D+D+D I+ +EL M G+ S D ++EAD D D IS +EF ++L
Sbjct: 122 YDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE 181
Query: 541 TASISSR 547
+ +
Sbjct: 182 KVDVEQK 188
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
+ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVDG 60
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
+ ++FSEF+ L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHAIEFSEFL--ALMSRQLKCNDSEQ-ELL--EAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 512 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
K + +D +L E D G I++ +F LL
Sbjct: 116 KLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 4e-28
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 20/161 (12%)
Query: 400 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVLEI---------- 446
L+ +FD D D NG++ E+ Q +A+ + V +
Sbjct: 3 AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62
Query: 447 -LQAIDCNTDGLVDFSEFVAATLHVHQL--EEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+ +DG + +F+ T ++ E + + D + DG I +
Sbjct: 63 LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122
Query: 504 ELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 540
E G + D + +G +SL E +R
Sbjct: 123 EFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+ ++ D + +G I+ +E L + ++ E +D N +G
Sbjct: 96 FNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA---LGMSKAEAAEAFNQVDTNGNGE 152
Query: 458 VDFSEFVAA 466
+ E + A
Sbjct: 153 LSLDELLTA 161
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 21/82 (25%)
Query: 478 SEKWHLRSQAAFEKFDIDRDGFITPEEL---------------------RMHTGLKGSID 516
+ R + F+++D D +G + + + G D
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 517 PLLEEADIDKDGRISLSEFRRL 538
L +EA + DG ++ +F R+
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRV 83
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 107 bits (271), Expect = 6e-28
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 459
D+++++ ++ F+ D ++ G I+ E ++ L + +++ + E+ D +G +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 460 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 514
F EF+ ++ ++++ SE LR AF FD + G+I L+ ++ G +
Sbjct: 61 FPEFL--SMMGRRMKQTTSED-ILR--QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH 115
Query: 515 -IDPLLEEADIDKDGRISLSEFRRLLRT 541
L + + G+I F + T
Sbjct: 116 EFAEFLGITETE-KGQIRYDNFINTMFT 142
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 3e-08
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
E+ LR F D + G I ++ AL +L +LK E L + G +
Sbjct: 76 TSED--ILRQAFRTFDPEGTGYIPKAALQDAL-LNLGDRLKPHEFAEFLGITETE-KGQI 131
Query: 459 DFSEFVA 465
+ F+
Sbjct: 132 RYDNFIN 138
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-27
Identities = 60/334 (17%), Positives = 104/334 (31%), Gaps = 76/334 (22%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ + + + +G G FG + N AVK + +N K E IL+ +
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV-RNI---KKYTRSAKIEADILKKI 88
Query: 154 AGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
+ N+VK++ F +++ + E G L + I + + +D + ++L
Sbjct: 89 QNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEIL 147
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAK----------------------EDSSLKATDFG 247
+ L H D+KPEN L + + +K DFG
Sbjct: 148 KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207
Query: 248 LSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG---------- 296
+ F I+ + Y APEV L SD+WS G + L G
Sbjct: 208 CATFK--SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 297 ------------------------RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----- 327
+ ++ K
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325
Query: 328 ---SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
DF+ +L DP R + A+ L H ++
Sbjct: 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 80/331 (24%), Positives = 117/331 (35%), Gaps = 74/331 (22%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D KA G VAVK + KN E + E+++L+
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV-KNV---DRYCEAARSEIQVLEH 67
Query: 153 LAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L + V+ FE ++ I EL G D I + + Q
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDSSLKATDFGLSDF 251
+ + H + L H D+KPEN LF + + +K DFG + +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 252 IKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTED---- 306
+ +V + +Y APEV L DVWSIG I G F T D
Sbjct: 187 D--DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF--PTHDSKEH 242
Query: 307 --------GIF-KEVLRNKP-----DFRRKPWPSISNSAK-------------------- 332
G K +++ R W S++ +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 333 ----DFVKKLLVKDPRARLTAAQALSHPWVR 359
D ++K+L DP R+T +AL HP+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 72/330 (21%), Positives = 114/330 (34%), Gaps = 70/330 (21%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D +VA+K I +N E + E+ +L+
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII-RNV---GKYREAARLEINVLKK 72
Query: 153 LAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+ + V + F ++ IA EL G + + Y + Q
Sbjct: 73 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQ 131
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDSSLKATDFGLSDF 251
+ H + L H D+KPEN LF +++ +++S++ DFG + F
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191
Query: 252 IKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR------------- 297
+ IV + +Y PEV L+ DVWSIG I + G
Sbjct: 192 D--HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 298 --------------------------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
WD+ KP S+ +
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309
Query: 332 -KDFVKKLLVKDPRARLTAAQALSHPWVRE 360
D ++++L DP R+T A+AL HP+
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAG 339
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-27
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 19/225 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQ----LHIESKIYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + MEL G L+ + +++ K ++ QM+ H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL K+ + + DFGL+ + P ++ +++ G+A Y
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 269 APEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIFKE 311
+ D+ S+G V+ Y G P W + ++
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMY-FNLGSLP-WQGLKAATKRQ 225
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 7e-27
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 390 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 449
++ + +E F + +G +L E + L + + ++
Sbjct: 8 SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65
Query: 450 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 506
D N DG VDF EF+AA + Q + KW F+ +D D +G I EL
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW------YFKLYDADGNGSIDKNELLDMF 119
Query: 507 ---------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ I+ + + DI+ DG ++L EF +
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-26
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
+ + + L L +F A+D +K G +S +++Q A + L +
Sbjct: 7 HAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGD- 64
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA-----------AFE 490
I+++ + VDF FV H +E+ D+E + AF+
Sbjct: 65 ---RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121
Query: 491 KFDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLL 539
+D+DRDG I+ E+ + G++ + D ++EAD D DG +S EF + L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
Query: 540 RTASISSR 547
+ +
Sbjct: 182 EKMDVEQK 189
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 377 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 436
+ F + L F D+D++G IS EM Q L +
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Query: 437 KLKE----SRVLEILQAIDCNTDGLVDFSEFVAA--------TLHVHQLEEHDS 478
++ E + +Q D + DG V F EF + + + L+ H
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHHHH 200
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-26
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
D ++ + ++ F+ ID +++G I E++ LA + + E L+ + G
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTD----EYLEGMMSEAPGP 55
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 514
++F+ F+ T+ +L D E +R AF FD + GFI + LR G + +
Sbjct: 56 INFTMFL--TMFGEKLNGTDPED-VIR--NAFACFDEEASGFIHEDHLRELLTTMGDRFT 110
Query: 515 ---IDPLLEEADIDKDGRISLSEFRRLLRTAS 543
+D + EA IDK G + EF R+L+ +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-26
Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 364 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 423
E ++ SV + + R + L S +EL L F +G ++
Sbjct: 27 LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84
Query: 424 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483
E ++ ++ P + + A D + +G V F +F+ + + + W
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW-- 142
Query: 484 RSQAAFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADID 525
AF +DI++DG+IT EE+ + ++ ++ D +
Sbjct: 143 ----AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198
Query: 526 KDGRISLSEFRRLLR 540
KDG +++ EF +
Sbjct: 199 KDGVVTIDEFIESCQ 213
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-25
Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
K R + S D+ E+ D ++ F ID + +G I +++R+ A +K
Sbjct: 3 KAKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN- 61
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
E L A+ G ++F+ F+ T+ +L+ D E + AF+ D D G I
Sbjct: 62 ---EELDAMIKEASGPINFTVFL--TMFGEKLKGADPED-VIM--GAFKVLDPDGKGSIK 113
Query: 502 PEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
L G + + I + D G + ++
Sbjct: 114 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-25
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
S + +L + F A+D D +G+IS+ E+ AL+ + ++L D N
Sbjct: 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSS-AGVPFSLATTEKLLHMYDKNH 76
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
G + F EF + + + F K D DG + E+R + +G
Sbjct: 77 SGEITFDEFKDLHHFILSM------------REGFRKRDSSGDGRLDSNEVRAALLSSGY 124
Query: 512 KGS---IDPLLEEADIDKDGRISLSEFRRLL 539
+ S L+ + D + G + ++ L
Sbjct: 125 QVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 6e-15
Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462
+ +R+ F D +G + E+R AL +++ E +++ D G + F +
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAAL-LSSGYQVSEQTFQALMRKFDRQRRGSLGFDD 150
Query: 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+V ++ V ++ F +D +R G +T
Sbjct: 151 YVELSIFVCRVRN------------VFAFYDRERTGQVT 177
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 62/306 (20%), Positives = 111/306 (36%), Gaps = 71/306 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
T+ + +G G++G + + G+ VAVK + RE ++ + HE
Sbjct: 11 TLLECVGKGRYGEVWRGS--WQGENVAVKIF------SSRDEKSWFRETELYNTVMLRHE 62
Query: 158 NVVKFYNA----FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++ F + +++ E G L D + + + LR+
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----------QLTTLDTVSCLRIVL 112
Query: 214 EC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
HLH + HRD+K +N L K++ D GL+
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQ 169
Query: 259 QDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILLCGRRPFWDKTED 306
D+ VG+ Y+APEVL + D+W+ G++ + + +
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229
Query: 307 GI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLVK----DPRARLT 348
F +V+ N P F +R P+ S+ + KL+ + +P ARLT
Sbjct: 230 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 349 AAQALS 354
A +
Sbjct: 290 ALRIKK 295
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +GK +G G FG + + + VA+K +E K P + E + + L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQ----LHLEYRFYKQLGSG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + + Y Y + +EL G L+ + D ++ K ++ Q++ H
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 217 LHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI-------KPGKKFQDIVGSAY 266
L++RD+KPENFL K + DF L+ ++I P ++ + + G+A
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTAR 182
Query: 267 YVAPEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIFKE 311
Y++ K D+ ++G + Y L G P W + KE
Sbjct: 183 YMSINTHLGKEQSRRDDLEALGHMFMY-FLRGSLP-WQGLKADTLKE 227
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 68/306 (22%), Positives = 117/306 (38%), Gaps = 71/306 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
+ K +G G++G ++ K G++VAVK RE +I Q L HE
Sbjct: 40 QMVKQIGKGRYGEVWMG--KWRGEKVAVKVF------FTTEEASWFRETEIYQTVLMRHE 91
Query: 158 NVVKFYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++ F A +Y+ + E G L D + K + + ML++A
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----------KSTTLDAKSMLKLAY 141
Query: 214 E-----CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
CHLH + HRD+K +N L K++ + D GL+
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNE 198
Query: 259 QDI-----VGSAYYVAPEVLKRKSGPES-------DVWSIGVITYILLCGRRPFWDKTED 306
DI VG+ Y+ PEVL D++S G+I + + E
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258
Query: 307 GI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLVK----DPRARLT 348
+ + +++ + P + R +P+ S+ + KL+ + +P +RLT
Sbjct: 259 QLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT 318
Query: 349 AAQALS 354
A +
Sbjct: 319 ALRVKK 324
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 6e-25
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 388 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 447
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++
Sbjct: 7 DDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLM 65
Query: 448 QAIDCNTDGLVDFSEFVAATLH 469
A D + G +D+ EF+AAT+H
Sbjct: 66 DAADIDKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 3e-12
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512
++ G +D + A +L E E L+ F+ D D G IT +EL+ GLK
Sbjct: 1 HSSGHIDDDDKHMA----ERLSE--EEIGGLK--ELFKMIDTDNSGTITFDELK--DGLK 50
Query: 513 --GS------IDPLLEEADIDKDGRISLSEF 535
GS I L++ ADIDK G I EF
Sbjct: 51 RVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 6e-25
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 368 PIDISVLN--NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID--VDKNGSISL 423
+ SVL ++ + + L L A + E+ L + F I V +G I+
Sbjct: 10 HLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINK 69
Query: 424 EEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKW 481
EE + AL K KES + + D +G++ F EF A ++ D +
Sbjct: 70 EEFQLALFKT---NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126
Query: 482 HLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS------------IDPLLEEADIDKD 527
+F+ +D+ + GFI +E++ + L S ID EEAD D
Sbjct: 127 ------SFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180
Query: 528 GRISLSEFRRLLR 540
G+I E+R L+
Sbjct: 181 GKIDKEEWRSLVL 193
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 8e-25
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G+ +G G FG + T+ N +VA+K E + P ++ E + + LAG
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-EPRRSDAPQ----LRDEYRTYKLLAGC 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y ++ + + ++L G L+ +L +++ K A+ +QML H
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123
Query: 217 LHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI-------KPGKKFQDIVGSAY 266
LV+RD+KP+NFL ++K + + DFG+ + P ++ +++ G+A
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 183
Query: 267 YVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 311
Y++ L R+ D+ ++G + L G P W + K+
Sbjct: 184 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP-WQGLKAATNKQ 228
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 44/227 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + P +E +IL+ H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP--PDLKAKFLQEARILKQY-SHPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
+V+ +YI MEL +GG+ L L + +R + V+ +L++ +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTF-LRTEGAR-------LRVKTLLQMVGDAAAG 225
Query: 216 ----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+HRD+ N L E + LK +DFG+S ++ Y
Sbjct: 226 MEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMS---------REEADGVYAASGG 273
Query: 269 ---------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE L + ESDVWS G++ + G P+ + +
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 2e-24
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 19/154 (12%)
Query: 406 LRDQFDAIDVDKNGSISLEE---MRQALAKDLPWKLKESRVLE-----------ILQAID 451
+ +F D D NG I + +A+ + + R + D
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 452 CNTDGLVDFSEFVAATLHVHQLEEHDSEKW-HLRSQAAFEKFDIDRDGFITPEELR---M 507
+ D + EFV + + + + AA D D DG +T +
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 508 HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 540
G+ D D DG++ +E
Sbjct: 126 AFGVPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
+ L D D +G++++ + +AL + + E + A+D + D
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA---FGVPEDLARQAAAALDTDGD 146
Query: 456 GLVDFSEFVAA 466
G V +E V A
Sbjct: 147 GKVGETEIVPA 157
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 71/303 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
+ + +G G+FG + K G+ VAVK RE +I Q + HE
Sbjct: 45 VLQESIGKGRFGEVWRG--KWRGEEVAVKIF------SSREERSWFREAEIYQTVMLRHE 96
Query: 158 NVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++ F A DN ++ + E G L D + V V M+++A
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----------NRYTVTVEGMIKLAL 146
Query: 214 EC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
HLH + HRD+K +N L K++ + D GL+
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDT 203
Query: 259 QDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILLCGRRPFWDKTED 306
DI VG+ Y+APEVL + +D++++G++ + + +
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263
Query: 307 GI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLV----KDPRARLT 348
+ + +++ + P R P+ S A + K++ + ARLT
Sbjct: 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 323
Query: 349 AAQ 351
A +
Sbjct: 324 ALR 326
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-24
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 390 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 449
A + + L +++ ++++ F IDVD++G +S E+++ + L + + +L+
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLKE 62
Query: 450 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 506
G ++F+ F+ ++ +L DSE+ +R AF FD + E ++
Sbjct: 63 A----PGPLNFTMFL--SIFSDKLSGTDSEE-TIR--NAFAMFDEQETKKLNIEYIKDLL 113
Query: 507 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
+ G + + +EA ++ G+ +F +++
Sbjct: 114 ENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ +G+ +G G FG Y+ T+ + VA+K +E K P + E KI + L G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQ----LLYESKIYRILQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + M+L G L+ + + + K ++ QM+ H
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL + + + DFGL+ + P ++ +++ G+A Y
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 301
+ D+ S+G + L G P W
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-W 213
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 3e-24
Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 22/168 (13%)
Query: 395 ASTLDDEELADLRDQFDAI-DVDKNGSIS---LEEMRQALAKDLPWKLKESRVLE----- 445
A L D + + F+ D + +G I E + + W + E
Sbjct: 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATL 62
Query: 446 ------ILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 496
+ + D N D V E++ + + E E F+ D
Sbjct: 63 KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSG 122
Query: 497 DGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 540
D I E G D + ++ F RL
Sbjct: 123 DNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 3e-24
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 30/167 (17%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNT 454
+ + + D D +G + +E++ + ++L K++ + +
Sbjct: 13 ITASQFFEIWLHFDADGSGYLEGKELQNLI-QELLQARKKAGLELSPEMKTFVDQYGQRD 71
Query: 455 DGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 506
DG + E L + + ++ S + + K+D D GFI EEL+
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCE-EFM--KTWRKYDTDHSGFIETEELKNF 128
Query: 507 -MHTGLKGS-----------IDPLLEEADIDKDGRISLSEFRRLLRT 541
K + D +L+ D + DG++ L+E RLL
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 3e-23
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 23/186 (12%)
Query: 376 NMRQFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA--- 431
+ + + F L L E + + D D +G I EE++ L
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCE--EFMKTWRKYDTDHSGFIETEELKNFLKDLL 133
Query: 432 ----KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA--ATLHVHQLEEHDSEKWHLRS 485
K + +L+ D N DG ++ +E L+ +
Sbjct: 134 EKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF 193
Query: 486 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEE--------ADIDKDGRISLSE 534
AFE +D D +G+I EL K + + + G++ ++
Sbjct: 194 NKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTD 253
Query: 535 FRRLLR 540
+L
Sbjct: 254 LALILS 259
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 3e-24
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L E +F +G ++L E +Q V ++ + D N DG
Sbjct: 11 LSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGY 68
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 507
+DF E+VAA V + + LR F+ +D+D +G I EL
Sbjct: 69 IDFMEYVAALSLVLKGKVDQ----KLRW--YFKLYDVDGNGCIDRGELLNIIKAIRAINR 122
Query: 508 ---HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ + + ++ DI+ DG +SL EF ++
Sbjct: 123 CNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 8/122 (6%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES------RVL 444
+ AL+ L + LR F DVD NG I E+ +
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTN 134
Query: 445 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 504
+ ID N DG + EF+ L + + L + D PEE
Sbjct: 135 MVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRS--LDLTHIVKLIQNDGKNPHAPEE 192
Query: 505 LR 506
Sbjct: 193 AE 194
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 4e-24
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
Query: 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGN 362
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 512
G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G K
Sbjct: 363 GTIDFPEFL--TMMARKMKDTDSEEE-IR--EAFRVFDKDGNGYISAAELRHVMTNLGEK 417
Query: 513 GS---IDPLLEEADIDKDGRISLSEFRRLL 539
+ +D ++ EADID DG+++ EF +++
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 5e-24
Identities = 66/369 (17%), Positives = 118/369 (31%), Gaps = 110/369 (29%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F+ RY + + LG G F +++ D VA+ K+ K+ E E+++L+++
Sbjct: 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAM-KVVKS---AEHYTETALDEIRLLKSV 90
Query: 154 A-------GHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
E VV+ + F+ + ++ + E+ G LL I+
Sbjct: 91 RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVK 149
Query: 203 VVVRQMLRVAAECHLH-GLVHRDMKPENFLFK---------------------------- 233
+++Q+L+ H ++H D+KPEN L
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSA 209
Query: 234 ------------------SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LK 274
E +K D G + + K F + + + Y + EV +
Sbjct: 210 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQTRQYRSLEVLIG 267
Query: 275 RKSGPESDVWSIGVITYILLCGRRPF-----------------------------WDK-- 303
+D+WS + + L G F
Sbjct: 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGK 327
Query: 304 ------TEDGIFKEVLRNKPDFRRKPWPSISN-------SAKDFVKKLLVKDPRARLTAA 350
T+ G K + + KP + DF+ +L P R TAA
Sbjct: 328 YSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAA 387
Query: 351 QALSHPWVR 359
+ L HPW+
Sbjct: 388 ECLRHPWLN 396
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 63/300 (21%), Positives = 107/300 (35%), Gaps = 45/300 (15%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD-- 93
H+HH + T ++ + Q + K + S T P
Sbjct: 6 HHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDL 65
Query: 94 --FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
R+ T+ + LGHG FG Y + N +VAVK + + D
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLM 123
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E I+ H+N+V+ +I +EL GG+L + + + +++ +
Sbjct: 124 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR--PSQPSSLAM 180
Query: 206 RQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
+L VA + +L + +HRD+ N L K DFG++
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--------- 231
Query: 259 QDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+DI + YY PE ++D WS GV+ + I G P+ K+
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 7e-24
Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 32/232 (13%)
Query: 330 SAKDFVKKLLVKDPRARLTAAQALS---HPWVREGGDASEIPIDISVLNNMRQFVKYSRL 386
K+ +K R R T + W+ S L + L
Sbjct: 20 GRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVRHQPEGL 79
Query: 387 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 446
Q + + +EL L F G + + + ++ P + +
Sbjct: 80 DQLQAQ---TKFTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFPQGDATTYAHFL 134
Query: 447 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 506
A D + +G + F +FV + + H+ + + AF +DI++DG IT EE+
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHE------KLKWAFNLYDINKDGCITKEEML 188
Query: 507 M------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
++ ++ D ++DG +++ EF +
Sbjct: 189 AIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 9e-24
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 53/251 (21%)
Query: 81 PCGKRTD-----FGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
P G + GY + D + T K LG GQFG + D VA+K I++
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGS 60
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 193
M + ++ E K++ L+ HE +V+ Y ++I E G LL+ L +
Sbjct: 61 M----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMR 114
Query: 194 SRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDF 246
R+ +Q+L + + +L +HRD+ N L + +K +DF
Sbjct: 115 HRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDF 164
Query: 247 GLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-IL 293
GLS + ++ Y PEVL K +SD+W+ GV+ + I
Sbjct: 165 GLS---------RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215
Query: 294 LCGRRPFWDKT 304
G+ P+ T
Sbjct: 216 SLGKMPYERFT 226
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 1e-23
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 27/184 (14%)
Query: 376 NMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVD--KNGSISLEEMRQALA 431
++ LAS EE+ L + F + +G I EE + AL
Sbjct: 7 KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66
Query: 432 KDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 490
++ + + + + I D +G+++F EFV + L V EK AF+
Sbjct: 67 RN---RNRRNLFADRIFDVFDVKRNGVIEFGEFVRS-LGVFHPSAPVHEKVKF----AFK 118
Query: 491 KFDIDRDGFITPEELR-------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFR 536
+D+ + GFI EEL+ + L S +D +AD DG+I + E++
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
Query: 537 RLLR 540
+
Sbjct: 179 DFVS 182
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 2e-23
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 35/205 (17%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
++S + A+ D +L + +F ++ +G++ + E ++ K +
Sbjct: 4 QFSWEEAEENGAV-GAADAAQLQEWYKKF--LEECPSGTLFMHEFKRFF-KVPDNEEATQ 59
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
V + +A D N D +DF E+VAA V + KW F+ +D DR+G I
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCID 113
Query: 502 PEELR-----------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 538
+EL + +D + D + DG++SL+EF
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
Query: 539 LRT--ASISSRNVPPSPSGHRNPRK 561
R + + +PS + ++
Sbjct: 174 ARRDKWVMKMLQMDLNPSSWISQQR 198
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 3e-23
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T + +G GQFG ++ N D+VA+K I + M + ED E +++ L+ H
Sbjct: 11 TFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-- 216
+V+ Y + + + E E G L D L + + + + V
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSD-YLRTQRGLFAAETLLGMCLD---VCEGMAYL 120
Query: 217 -LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 268
++HRD+ N L E+ +K +DFG++ + ++ Y
Sbjct: 121 EEACVIHRDLAARNCL---VGENQVIKVSDFGMT---------RFVLDDQYTSSTGTKFP 168
Query: 269 ----APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+PEV + +SDVWS GV+ + + G+ P+ +++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 3e-23
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ + L + F +D D++G IS E++QAL+ V I+ D V
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 459 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS- 514
+FSEF ++ W Q F +D D G I EL+ G + S
Sbjct: 62 NFSEFTGVWKYI--------TDW----QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109
Query: 515 --IDPLLEEADIDKDGRISLSEFRRLL 539
D L+ + D G+I+ +F +
Sbjct: 110 QFHDILIRKFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-15
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462
+ D ++ F D D +G I E++QAL ++L + +++ D G + F +
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQAL-SGFGYRLSDQFHDILIRKFDRQGRGQIAFDD 131
Query: 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
F+ + + +L + F ++D D+DG+I
Sbjct: 132 FIQGCIVLQRLTD------------IFRRYDTDQDGWIQ 158
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 7e-23
Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 45/230 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + LG G FG A + VAVK ++ + + P A++D REV + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE- 214
H N+++ Y + + EL G LLDR+ + ++ + R A +
Sbjct: 80 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGH--------FLLGTLSRYAVQV 130
Query: 215 ----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
+L +HRD+ N L + +K DFGL + +YV
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQNDD--------HYV 179
Query: 269 ------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE LK R SD W GV + + G+ P+
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 8e-23
Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+L+ ++ L + + E+ + F + +G +S+EE ++ P+
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 117
Query: 502 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
E+ + + + + + D ++DG++SL EF R +
Sbjct: 118 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 9e-23
Identities = 64/302 (21%), Positives = 112/302 (37%), Gaps = 69/302 (22%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ ++ G+FG + A + VAVK + EV L + HEN
Sbjct: 27 QLLEVKARGRFGCVWKAQ--LLNEYVAVKIFPIQDK----QSWQNEYEVYSLPGMK-HEN 79
Query: 159 VVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+++F A + V ++ E G L D + K V ++ +A
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----------KANVVSWNELCHIAET 129
Query: 215 -----CHLH------------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
+LH + HRD+K +N L K + + DFGL+ + GK
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKS 186
Query: 258 FQDI---VGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
D VG+ Y+APEVL +R + D++++G++ + L ++ +
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 309 --FKEVLRNKPDF--------RRKPWPSISNS-AKDFVKKLLVK--------DPRARLTA 349
F+E + P +K P + + K +L + D ARL+A
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
Query: 350 AQ 351
Sbjct: 307 GC 308
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 65/264 (24%), Positives = 101/264 (38%), Gaps = 51/264 (19%)
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTYV 114
K Q++ K + T + P T Y++ F R GK LG G FG
Sbjct: 9 KPKYQVRWKIIESYEGNSYTFIDP----TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 115 AT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169
AT K + +VAVK ++ E + E+KI+ L HEN+V A
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 170 NYVYIAMELCEGGELLD-----RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL-- 217
V + E C G+LL+ + + D + ++ R +L +++ L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 268
+HRD+ N L K DFGL+ +DI+ + Y+
Sbjct: 183 KNCIHRDVAARNVL---LTNGHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPV 230
Query: 269 ---APEVLK-RKSGPESDVWSIGV 288
APE + +SDVWS G+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGI 254
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 50/226 (22%), Positives = 85/226 (37%), Gaps = 39/226 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG Y G++ VA+K++ + P A +++ E ++ ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVD 75
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V + V + +L G LLD + + + Q +A
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQ---IAKG 129
Query: 215 CH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+ LVHRD+ N L K +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA--------EEKEYHAEG 178
Query: 269 --------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
A E + R +SDVWS GV + ++ G +P+
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 1e-22
Identities = 62/290 (21%), Positives = 104/290 (35%), Gaps = 56/290 (19%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHG 107
+ H H S V+ + + T K++G G
Sbjct: 4 YHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLK--------FTTEIHPSCVTRQKVIGAG 55
Query: 108 QFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+FG Y K + + VA+K ++ D E I+ + H N+++
Sbjct: 56 EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFS-HHNIIRLE 112
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL- 217
+ I E E G L L +KD ++ V Q++ + +L
Sbjct: 113 GVISKYKPMMIITEYMENGALDK-FLREKDGEFS-------VLQLVGMLRGIAAGMKYLA 164
Query: 218 -HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-------- 268
VHRD+ N L + K +DFGLS + +D + Y
Sbjct: 165 NMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRVL------EDDPEATYTTSGGKIPIR 215
Query: 269 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
APE + RK SDVWS G++ + ++ G RP+W+ + EV++
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMK 261
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-22
Identities = 73/317 (23%), Positives = 118/317 (37%), Gaps = 62/317 (19%)
Query: 32 EAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSR--RQTGVIPCGKRT--- 86
E + H + + K + R +L H T + T P KR
Sbjct: 148 EGRVYH-YRINTASDGKLYVSSESRFNTLAELV--HHHSTVADGLITTLHYPAPKRNKPT 204
Query: 87 ----DFGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
YDK + +R T+ LG GQ+G Y K VAVK ++++ M V
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 260
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TE 198
E+ +E +++ + H N+V+ + YI E G LLD Y
Sbjct: 261 EEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLD---------YLREC 310
Query: 199 KDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
V +L +A + +L +HR++ N L E+ +K DFGLS
Sbjct: 311 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLS-- 365
Query: 252 IKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRR 298
+ + G Y APE L K +SDVW+ GV+ + I G
Sbjct: 366 -------RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS 418
Query: 299 PFWDKTEDGIFKEVLRN 315
P+ +++ + ++
Sbjct: 419 PYPGIDLSQVYELLEKD 435
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 2e-22
Identities = 68/296 (22%), Positives = 103/296 (34%), Gaps = 60/296 (20%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK----RTDFGYDKDFDRRY-TIG 101
H H H R Y Q K Q P R + ++ + I
Sbjct: 2 HHHHHHSSGRENLYFQGKL-------PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIE 54
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K++G G G + G R VA+K ++ D E I+ H N
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQFD-HPN 111
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE---- 214
+++ I E E G L L D ++T + Q++ +
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQFT-------IMQLVGMLRGVGAG 163
Query: 215 -CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+L G VHRD+ N L + K +DFGLS ++ A Y
Sbjct: 164 MRYLSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDP-------DAAYTTTG 213
Query: 269 --------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
APE + R SDVWS GV+ + +L G RP+W+ T ++V+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVIS 265
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 2e-22
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 50/228 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ K LG GQFG + K VAVK I++ M + ++ +E + + L+ H
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLD--RILAKKDSRYTEKDAAVVVRQMLRVAAE-- 214
+VKFY + +YI E G LL+ R + Q+L + +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLR----------SHGKGLEPSQLLEMCYDVC 114
Query: 215 ---CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV- 268
L H +HRD+ N L D +K +DFG++ + ++ Y
Sbjct: 115 EGMAFLESHQFIHRDLAARNCL---VDRDLCVKVSDFGMT---------RYVLDDQYVSS 162
Query: 269 ----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APEV K +SDVW+ G++ + + G+ P+ T
Sbjct: 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 95.5 bits (237), Expect = 3e-22
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)
Query: 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------E 445
S + + A + D D NG I +E+ + + KL+ +
Sbjct: 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFF-RHMLKKLQPKDKITDERVQQIKKS 61
Query: 446 ILQAIDCNTDGLVDFSEFVAATL--------HVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
+ A D DG + E L + D+ ++ + K+D D
Sbjct: 62 FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMK---IWRKYDADSS 118
Query: 498 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543
G+I+ EL+ L D +++ D +KDGR+ L++ R+L
Sbjct: 119 GYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQE 178
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 91.3 bits (226), Expect = 9e-21
Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 27/176 (15%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA-------KDLPWKLKESRV 443
L + + + D D +G IS E++ L K +P +
Sbjct: 91 LLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYT 150
Query: 444 LEILQAIDCNTDGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
+++ D N DG +D ++ L +++ + + F +D+ R
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210
Query: 498 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
G + E+ L + LL D++KDG+I SE L
Sbjct: 211 GALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 5e-09
Identities = 25/188 (13%), Positives = 58/188 (30%), Gaps = 37/188 (19%)
Query: 390 ALRALASTLDDEELAD-------LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 442
R + L ++ + A D +G + +EE+ + L R
Sbjct: 36 FFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFR 95
Query: 443 ----------VLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFE 490
++I + D ++ G + +E L + ++ K + A +
Sbjct: 96 REAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155
Query: 491 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEA------------------DIDKDGRISL 532
FD ++DG + +L L+ + + D+ + G +
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215
Query: 533 SEFRRLLR 540
E ++
Sbjct: 216 PEVDGFVK 223
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 5e-06
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 13/140 (9%)
Query: 386 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK------ 439
LK L+ ++ D +K+G + L ++ + LA + L+
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDAS 189
Query: 440 -----ESRVLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFEKF 492
+ +I D + G ++ E + +
Sbjct: 190 SQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHC 249
Query: 493 DIDRDGFITPEELRMHTGLK 512
D+++DG I EL + GLK
Sbjct: 250 DMNKDGKIQKSELALCLGLK 269
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 4e-22
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 48/238 (20%)
Query: 87 DFGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
+F + + + + +G G+FG + G++VAVK I+ + +
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDAT-----AQAFL 62
Query: 145 REVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDA 201
E ++ L H N+V+ E+ +YI E G L+D Y + +
Sbjct: 63 AEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------YLRSRGRS 112
Query: 202 AVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-- 252
+ +L+ + + +L + VHRD+ N L ED+ K +DFGL+
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 169
Query: 253 -KPGKKFQDIVGSAYYV---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+ K V APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 170 TQDTGKLP--------VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 5e-22
Identities = 59/236 (25%), Positives = 88/236 (37%), Gaps = 43/236 (18%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ LG G FG Y G VAVK++ + P D +RE++
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQ 76
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
IL+AL + +VK+ + + ME G L D L + +R +
Sbjct: 77 ILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF-LQRHRARLDASRLLLYSS 134
Query: 207 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
Q + VHRD+ N L + ++ +K DFGL+ + K
Sbjct: 135 Q---ICKGMEYLGSRRCVHRDLAARNIL---VESEAHVKIADFGLAKLLPLDKD------ 182
Query: 264 SAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 305
YYV APE L +SDVWS GV+ Y + + E
Sbjct: 183 --YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-21
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 384 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 443
R Q + + + ++ + ++ F ID DK+G IS ++R L E +
Sbjct: 37 KRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQEL 95
Query: 444 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
++ G ++F+ F+ T+ ++ D E + AF FD + DG E
Sbjct: 96 DSMVA----EAPGPINFTMFL--TIFGDRIAGTDEEDV-IV--NAFNLFD-EGDGKCKEE 145
Query: 504 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
L+ G K S +D L EA ID +G I + +F ++L
Sbjct: 146 TLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-21
Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 46/247 (18%)
Query: 90 YDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 60
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+++ + H N+V+ + YI E G LLD + +
Sbjct: 61 AVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS-------AVV 112
Query: 208 MLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+L +A + +L +HRD+ N L E+ +K DFGLS +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT------- 162
Query: 261 IVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 307
G Y APE L K +SDVW+ GV+ + I G P+
Sbjct: 163 --GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
Query: 308 IFKEVLR 314
+++ + +
Sbjct: 221 VYELLEK 227
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-21
Identities = 59/267 (22%), Positives = 102/267 (38%), Gaps = 57/267 (21%)
Query: 67 QHQKTNSRR--QTGVIPCGKRTDFGYDKDFDR-----RYTIGKLLGHGQFGYTYVATDKA 119
H K + Q +PC + + K LG GQFG ++AT
Sbjct: 152 DHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 211
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179
+ VAVK ++ M +VE E +++ L H+ +VK + + +YI E
Sbjct: 212 HTK-VAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVKLHAVVTKEP-IYIITEFM 264
Query: 180 EGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 230
G LLD + +++ + + +++ +A+ + +HRD++ N
Sbjct: 265 AKGSLLD---------FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI 315
Query: 231 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSG 278
L K DFGL+ + I + Y APE +
Sbjct: 316 LV---SASLVCKIADFGLA---------RVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 279 PESDVWSIGVITY-ILLCGRRPFWDKT 304
+SDVWS G++ I+ GR P+ +
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMS 390
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 2e-21
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 28/177 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+L Q L+ L + D +EL F +G ++ E ++ + P+ +
Sbjct: 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDC--PSGHLNKSEFQKIYKQFFPFGDPSA 63
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ D + +G +DF EF+ A + E +D W AF+ +D+D +G I+
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIW------AFQLYDLDNNGLIS 117
Query: 502 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+E+ + ++ + D +KDG+++L EF +
Sbjct: 118 YDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-21
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 460
+++ F D D +G +S+EE+ AL + L + + I ++ D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSAL-RSLGKNPTNAELNTIKGQLNAKE---FDL 57
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 514
+ F T++ ++ + + AF D + +G I ELR ++ G +
Sbjct: 58 ATFK--TVYRKPIKTPTEQSKEML--DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113
Query: 515 IDPLLEEADIDKDGRISLSEFRRLLRT 541
++ L++E + DG I+ F +L T
Sbjct: 114 VEELMKEVSVSGDGAINYESFVDMLVT 140
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 8e-10
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ + ++ D F A+D + NG+I E+RQ L L L S V E+++ + + DG +
Sbjct: 73 EQSK--EMLDAFRALDKEGNGTIQEAELRQLLLN-LGDALTSSEVEELMKEVSVSGDGAI 129
Query: 459 DFSEFV 464
++ FV
Sbjct: 130 NYESFV 135
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 48/242 (19%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKIL 150
D ++G G FG A K +G R A+K++++ D E+++L
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVL 79
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTEKDAAV 203
L H N++ A E Y+Y+A+E G LLD + + +
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 204 VVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
+Q+L AA+ +L +HRD+ N L E+ K DFGLS
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLS------- 189
Query: 257 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 302
+ Q+ YV A E L SDVWS GV+ + I+ G P+
Sbjct: 190 RGQE-----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
Query: 303 KT 304
T
Sbjct: 245 MT 246
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-21
Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 41/230 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ LG G F + + GD V +K ++K E ++
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---ESFFEAASMMS 67
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
L+ H+++V Y + + E + G L L K + V +Q +
Sbjct: 68 KLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDT-YLKKNKNCINILWKLEVAKQ---L 122
Query: 212 AAECH---LHGLVHRDMKPENFL-----FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
AA H + L+H ++ +N L + +K +D G+S ++
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---------ITVLP 173
Query: 264 SAYY------VAPEVLK--RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
V PE ++ + +D WS G + I G +P
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 2e-21
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Query: 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDF 460
+D F D G+I+ + + L + + + V +I+ A +
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYL-RAIGYNPTNQLVQDIINADSSLRDASSLTL 60
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQ--AAFEKFDIDRDGFITPEELR---MHTGLKGS- 514
+ L +E D+ AF+ FD + G ++ +LR G K +
Sbjct: 61 DQIT--GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD 118
Query: 515 --IDPLLEEADIDKDGRISLSEFRRLL 539
+D LL+ ++D +G I +F +
Sbjct: 119 AEVDELLKGVEVDSNGEIDYKKFIEDV 145
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 3e-21
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 41/240 (17%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
K+ R+ T+ + LGHG FG Y + N +VAVK + + D
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLM 82
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E I+ H+N+V+ +I MEL GG+L + + + +++ +
Sbjct: 83 EALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR--PSQPSSLAM 139
Query: 206 RQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
+L VA + +L + +HRD+ N L K DFG++
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--------- 190
Query: 259 QDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+DI ++YY PE ++D WS GV+ + I G P+ K+
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 3e-21
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 54/252 (21%)
Query: 90 YDKD---FDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
+ +D R + + LG GQFG ++ + +VAVK +++ M + +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSM----SPDAFLA 57
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAV 203
E +++ L H+ +V+ Y + +YI E E G L+D + T +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVD---------FLKTPSGIKL 106
Query: 204 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
+ ++L +AA+ + +HRD++ N L + S K DFGL+
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLA------- 156
Query: 257 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 303
+ I + Y APE + +SDVWS G++ I+ GR P+
Sbjct: 157 --RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 304 TEDGIFKEVLRN 315
T + + + R
Sbjct: 215 TNPEVIQNLERG 226
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 90.4 bits (224), Expect = 3e-21
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 398 LDDEELADLRDQFDAI-DVDKNGSISLEE---MRQALAKDLPWKLKESRVLEILQAI--- 450
L+D + ++ FD D++ +GSI + M + L ++ + ++
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 451 --------DCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 500 ITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 540
+ EE + + L+ + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 4e-21
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ + +G G+FG + G++VAVK I+ + + E ++ L H N
Sbjct: 196 KLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDAT-----AQAFLAEASVMTQLR-HSN 247
Query: 159 VVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAE- 214
+V+ E+ +YI E G L+D Y + + + +L+ + +
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------YLRSRGRSVLGGDCLLKFSLDV 298
Query: 215 ----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
+L + VHRD+ N L ED+ K +DFGL+ ++ +
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---------KEASSTQDTG 346
Query: 269 -------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 95.7 bits (238), Expect = 5e-21
Identities = 68/317 (21%), Positives = 119/317 (37%), Gaps = 66/317 (20%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTK--------QHQKTNS----RRQTGVIPCG 83
+A+ ++ + + Y +T+ + ++ R T V P
Sbjct: 191 SDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS 250
Query: 84 KRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA 139
K G KD R + LG G FG ++ T VA+K ++ M +
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 305
Query: 140 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--T 197
E +E ++++ L HE +V+ Y ++ +YI E G LLD +
Sbjct: 306 PEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD---------FLKG 354
Query: 198 EKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250
E + + Q++ +AA+ ++ VHRD++ N L E+ K DFGL+
Sbjct: 355 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLA- 410
Query: 251 FIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGR 297
+ I + Y APE + +SDVWS G++ + GR
Sbjct: 411 --------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
Query: 298 RPFWDKTEDGIFKEVLR 314
P+ + +V R
Sbjct: 463 VPYPGMVNREVLDQVER 479
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 5e-21
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 11/149 (7%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTD 455
+ ++L + ++ F+ D +G I + + + L + VL++L D
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 512
VDF F+ V + + + F FD + +G + ELR G K
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYED-YL--EGFRVFDKEGNGKVMGAELRHVLTTLGEK 119
Query: 513 GSIDPLLE--EADIDKDGRISLSEFRRLL 539
+ + + D +G I+ F + +
Sbjct: 120 MTEEEVETVLAGHEDSNGCINYEAFLKHI 148
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 5e-21
Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 58/278 (20%)
Query: 67 QHQKTNS----RRQTGVIPCGKRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDK 118
+ ++ R T V P K G KD R + LG G FG ++ T
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
RVA+K ++ M + E +E ++++ L HE +V+ Y ++ +YI E
Sbjct: 207 GTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEE-PIYIVTEY 259
Query: 179 CEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPEN 229
G LLD + E + + Q++ +AA+ ++ VHRD++ N
Sbjct: 260 MSKGSLLD---------FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 230 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKS 277
L E+ K DFGL+ + I + Y APE +
Sbjct: 311 IL---VGENLVCKVADFGLA---------RLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 278 GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
+SDVWS G++ + GR P+ + +V R
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 5e-21
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 47/229 (20%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQFD- 74
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE- 214
H ++VK ++ V+I MELC GEL + +K S + + ++ A +
Sbjct: 75 HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS--------LDLASLILYAYQL 125
Query: 215 ----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
+L VHRD+ N L + +K DFGLS + + S YY
Sbjct: 126 STALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLS---------RYMEDSTYYK 173
Query: 269 -----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE + R+ SDVW GV + IL+ G +PF
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 9e-21
Identities = 66/265 (24%), Positives = 98/265 (36%), Gaps = 59/265 (22%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPI 138
YD F R R +GK LG G FG A A G VAVK +++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKMLKEGAT--HS 72
Query: 139 AVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLD-------RILA 190
+ E+KIL + H NVV A + + + +E C+ G L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 191 KKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKA 243
K + + + ++ + + L +HRD+ N L E + +K
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL---LSEKNVVKI 189
Query: 244 TDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVIT 290
DFGL+ +DI YV APE + R +SDVWS GV+
Sbjct: 190 CDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 291 Y-ILLCGRRPFWDKTEDGIFKEVLR 314
+ I G P+ D +E R
Sbjct: 241 WEIFSLGASPYPGVKID---EEFCR 262
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 47/246 (19%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREV 147
K+ D +I K++G G+FG K + VA+K ++ D E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEA 97
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
I+ H N+++ V I E E G L L K D+++T V Q
Sbjct: 98 SIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFT-------VIQ 148
Query: 208 MLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
++ + +L G VHRD+ N L + K +DFGL + +D
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLGRVL------ED 199
Query: 261 IVGSAYYV----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 308
+AY +PE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--- 256
Query: 309 FKEVLR 314
++V++
Sbjct: 257 -QDVIK 261
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 70/313 (22%), Positives = 104/313 (33%), Gaps = 77/313 (24%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD---FDRRY-TIGKLL 104
+ H H +Y T+ + G D+D F+ R+ + L
Sbjct: 4 YHHHHHH---DYDIPTTE-----------NLYFQGAMGSAFEDRDPTQFEERHLKFLQQL 49
Query: 105 GHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
G G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+V
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQ-HDNIV 105
Query: 161 KFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC--- 215
K+ + + ME G L D L K R Q +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDY-LQKHKERIDHIKLLQYTSQ---ICKGMEYL 161
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 268
+HRD+ N L + ++ +K DFGL+ + K+ YY
Sbjct: 162 GTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKE--------YYKVKEPGES 210
Query: 269 -----APEVLK-RKSGPESDVWSIGV-----ITYILLCGRRPFWDKTEDGIFKEVLRNKP 317
APE L K SDVWS GV TYI P G
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG---------- 260
Query: 318 DFRRKPWPSISNS 330
+
Sbjct: 261 ---NDKQGQMIVF 270
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 63/252 (25%), Positives = 93/252 (36%), Gaps = 52/252 (20%)
Query: 86 TDFGYDKD--FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKMILP 137
T YD F R R + GK LG G FG AT K++ VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--L 67
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---------RI 188
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 189 LAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSL 241
+ + + A+ + +L + + L +HRD+ N L
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL---LTHGRIT 184
Query: 242 KATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 288
K DFGL+ +DI + YV APE + ESDVWS G+
Sbjct: 185 KICDFGLA---------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 289 ITY-ILLCGRRP 299
+ + G P
Sbjct: 236 FLWELFSLGSSP 247
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-20
Identities = 61/265 (23%), Positives = 92/265 (34%), Gaps = 60/265 (22%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ + LG G FG Y G+ VAVKK++ + + D +RE++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIE 63
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
IL++L H+N+VK+ + + ME G L D L K R
Sbjct: 64 ILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY-LQKHKERIDHIKLLQYTS 121
Query: 207 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
Q + +HRD+ N L + ++ +K DFGL+ + K+
Sbjct: 122 Q---ICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKE------ 169
Query: 264 SAYYV------------APEVLK-RKSGPESDVWSIGV-----ITYILLCGRRPFWDKTE 305
++ APE L K SDVWS GV TYI P
Sbjct: 170 --FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
Query: 306 DGIFKEVLRNKPDFRRKPWPSISNS 330
G +
Sbjct: 228 IG-------------NDKQGQMIVF 239
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 1e-20
Identities = 56/225 (24%), Positives = 83/225 (36%), Gaps = 39/225 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ ++LG G FG Y + VAVK +K+ E E I++ L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--LDNKEKFMSEAVIMKNLD- 71
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H ++VK E++ +I MEL GEL L + + + Q +
Sbjct: 72 HPHIVKLIGIIEEEP-TWIIMELYPYGELGHY-LERNKNSLKVLTLVLYSLQ---ICKAM 126
Query: 216 H---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---- 268
VHRD+ N L +K DFGLS + I YY
Sbjct: 127 AYLESINCVHRDIAVRNIL---VASPECVKLGDFGLS---------RYIEDEDYYKASVT 174
Query: 269 -------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+PE + R+ SDVW V + IL G++PF+
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 50/226 (22%), Positives = 85/226 (37%), Gaps = 39/226 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG Y G++ VA+K++ + P A +++ E ++ ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVD 75
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V + V + +L G LLD + + + Q +A
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQ---IAKG 129
Query: 215 CH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+ LVHRD+ N L K +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA--------EEKEYHAEG 178
Query: 269 --------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
A E + R +SDVWS GV + ++ G +P+
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 48/252 (19%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKI 149
++T+G++LG G+FG + +VAVK + K +I +E+ RE
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAAC 78
Query: 150 LQALAGHENVVKFY------NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 203
++ H +V K A + + + G+L + SR E +
Sbjct: 79 MKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL---LASRIGENPFNL 134
Query: 204 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
++ ++R + +L +HRD+ N + ED ++ DFGLS
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM---LAEDMTVCVADFGLS------- 184
Query: 257 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 302
+ I YY A E L SDVW+ GV + I+ G+ P+
Sbjct: 185 --RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
Query: 303 KTEDGIFKEVLR 314
I+ ++
Sbjct: 243 IENAEIYNYLIG 254
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 2e-20
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 47/237 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--DSVREKFLQEALTMRQF-D 449
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE- 214
H ++VK ++ V+I MELC GEL + +K S + + ++ A +
Sbjct: 450 HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQL 500
Query: 215 ----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 268
+L VHRD+ N L + +K DFGLS +++ S YY
Sbjct: 501 STALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLSRYME---------DSTYYK 548
Query: 269 -----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-20
Identities = 58/284 (20%), Positives = 106/284 (37%), Gaps = 52/284 (18%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTY--VATD 117
+ + H +S +G++P G +D DR +GK+LG G+FG
Sbjct: 1 MGSSHHHHHHS---SGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQ 57
Query: 118 KANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY-----NAFEDDNY 171
+ +VAVK + K +E+ E ++ H NV++ + +
Sbjct: 58 EDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPK 115
Query: 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRD 224
+ + + G+L + SR + ++ +L+ + +L +HRD
Sbjct: 116 PMVILPFMKYGDLHTYL---LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRD 172
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEV 272
+ N + ++D ++ DFGLS + I YY A E
Sbjct: 173 LAARNCM---LRDDMTVCVADFGLS---------KKIYSGDYYRQGRIAKMPVKWIAIES 220
Query: 273 LK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
L R +SDVW+ GV + I G P+ ++ +L
Sbjct: 221 LADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 3e-20
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 28/177 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+LK + L ++E+ F I +G + ++ + P+
Sbjct: 6 SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 63
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ D N DG ++FSEF+ A + + +W AF+ +D+D DG+IT
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW------AFKLYDLDNDGYIT 117
Query: 502 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
E+ + +D + D + DG+++L EF+ +
Sbjct: 118 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 4e-20
Identities = 71/292 (24%), Positives = 110/292 (37%), Gaps = 61/292 (20%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHG 107
H+++++ + QL+ Q ++ V ++ YD F R GK+LG G
Sbjct: 1 HKYKKQFRYESQLQMVQVTGSSDNEYFYVDF----REYEYDLKWEFPRENLEFGKVLGSG 56
Query: 108 QFGYTYVAT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
FG AT K +VAVK +++ E + E+K++ L HEN+V
Sbjct: 57 AFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNL 114
Query: 163 YNAFEDDNYVYIAMELCEGGELLD--------------RILAKKDSRYTEKDAAVVVRQM 208
A +Y+ E C G+LL+ +K E + +
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 209 LRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
L A + L VHRD+ N L +K DFGL+ +DI
Sbjct: 175 LCFAYQVAKGMEFLEFKSCVHRDLAARNVL---VTHGKVVKICDFGLA---------RDI 222
Query: 262 VGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 299
+ + YV APE L +SDVWS G++ + I G P
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 5e-20
Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F++R+ + LG G FG Y G++VAVK ++ + D+K+E++
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIE 75
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
IL+ L HEN+VK+ +D + + ME G L + L K ++ K
Sbjct: 76 ILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY-LPKNKNKINLKQQLKYAV 133
Query: 207 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
Q + VHRD+ N L + + +K DFGL+ I+ K+
Sbjct: 134 Q---ICKGMDYLGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKE------ 181
Query: 264 SAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 305
YY APE L K SDVWS GV + +L
Sbjct: 182 --YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 5e-20
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 50/257 (19%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
R R +GK LG G FG +A DK + +VAVK ++ + + D+
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLIS 123
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTE 198
E+++++ + H+N++ A D +Y+ +E G L + L +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 199 KDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+ + + ++ A + +L +HRD+ N L ED+ +K DFGL+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLA-- 238
Query: 252 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGR 297
+DI YY APE L R +SDVWS GV+ + I G
Sbjct: 239 -------RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
Query: 298 RPFWDKTEDGIFKEVLR 314
P+ + +FK +
Sbjct: 292 SPYPGVPVEELFKLLKE 308
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 8e-20
Identities = 64/261 (24%), Positives = 95/261 (36%), Gaps = 54/261 (20%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F +RY + LG G FG Y Y T+ G+ VAVK ++ + P K+E+
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEID 85
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
IL+ L HE+++K+ ED + + ME G L D + + +
Sbjct: 86 ILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQ 141
Query: 207 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
Q + H +HRD+ N L D +K DFGL+ + G +
Sbjct: 142 Q---ICEGMAYLHAQHYIHRDLAARNVL---LDNDRLVKIGDFGLAKAVPEGHE------ 189
Query: 264 SAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 309
YY APE LK K SDVWS GV Y +L T+
Sbjct: 190 --YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL 247
Query: 310 KEVLRNKPDFRRKPWPSISNS 330
+ ++
Sbjct: 248 IGI----------AQGQMTVL 258
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 8e-20
Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 398 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVGG-THKMGE 60
Query: 456 GLVDFSEFVAATLHVHQL-EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 511
+ F EF+ + + E + AF+ FD + GFI+ ELR G
Sbjct: 61 KSLPFEEFL--PAYEGLMDCEQGTFA-DYM--EAFKTFDREGQGFISGAELRHVLTALGE 115
Query: 512 KGS---IDPLLEEADI--DKDGRISLSEFRRLLRTASISSR 547
+ S +D +++ D+ D +G + +F + + +
Sbjct: 116 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 58/261 (22%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT-------DKANGDRVAVKKIEKNKMILPIAVEDVKR 145
F R + T+GK LG G FG +A VAVK ++ + + D+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVS 89
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTE 198
E+++++ + H+N++ A D +Y+ +E G L + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 199 KDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+ + + ++ + +L +HRD+ N L E++ +K DFGL+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLA-- 204
Query: 252 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV-----ITYIL 293
+DI YY APE L R +SDVWS GV T
Sbjct: 205 -------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL-- 255
Query: 294 LCGRRPFWDKTEDGIFKEVLR 314
G P+ + +FK +
Sbjct: 256 --GGSPYPGIPVEELFKLLKE 274
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 70/329 (21%), Positives = 122/329 (37%), Gaps = 57/329 (17%)
Query: 24 HHRNANKEEAKR---RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVI 80
HH ++ A + R T ++ T+ ++ GV
Sbjct: 7 HHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVS 66
Query: 81 PCGKRTDFGYDK-DFDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEK 131
D K +F R + T+GK LG G FG +A DK VAVK ++
Sbjct: 67 EYELPED---PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 132 NKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD----- 186
+ + D+ E+++++ + H+N++ A D +Y+ +E G L +
Sbjct: 124 DAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Query: 187 --RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKE 237
+ + + + ++ + +L +HRD+ N L E
Sbjct: 182 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTE 238
Query: 238 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVW 284
++ +K DFGL+ +DI YY APE L R +SDVW
Sbjct: 239 NNVMKIADFGLA---------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 285 SIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
S GV+ + I G P+ + +FK +
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLL 318
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 2e-19
Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT--D 455
D ++ F D + I+ ++ + L + + +IL
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNA 60
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 512
+ F EF+ ++ + + + FD + +G + ELR G K
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVE---GLRVFDKEGNGTVMGAELRHVLATLGEK 117
Query: 513 GS---IDPLLEEADIDKDGRISLSEFRRLL 539
+ ++ L++ + D +G I+ F + +
Sbjct: 118 MTEEEVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 3e-19
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 38/223 (17%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG + VAVK ++ P +++ E ++Q L +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLD-NPY 79
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-- 216
+V+ + + ME+ E G L + +++ +K+ +V Q V+
Sbjct: 80 IVRMI-GICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ---VSMGMKYL 133
Query: 217 -LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 268
VHRD+ N L K +DFGLS ++ YY
Sbjct: 134 EESNFVHRDLAARNVL---LVTQHYAKISDFGLSKALR--------ADENYYKAQTHGKW 182
Query: 269 -----APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE + K +SDVWS GV+ + G++P+
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 4e-19
Identities = 64/317 (20%), Positives = 107/317 (33%), Gaps = 90/317 (28%)
Query: 99 TIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAG 155
+ +L+G G++G Y K + VAVK ++ E I + L
Sbjct: 16 KLLELIGRGRYGAVY----KGSLDERPVAVKVFSFANR------QNFINEKNIYRVPLME 65
Query: 156 HENVVKFYNAFEDDNYV-----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H+N+ +F E + ME G L + R
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----------SLHTSDWVSSCR 115
Query: 211 VAAE-----CHLH-----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
+A +LH + HRD+ N L K D + +DFGLS +
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTG 172
Query: 255 GKKFQD---------IVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCG- 296
+ + VG+ Y+APEVL+ + + D++++G+I + +
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232
Query: 297 ------------RRPFWDK-----TEDGIFKEVLRNK--PDFRRKPWPSISNSAKDFVKK 337
+ F + T + + V R K P F W S + + K+
Sbjct: 233 TDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA-WKENSLAVRSL-KE 290
Query: 338 LLVK----DPRARLTAA 350
+ D ARLTA
Sbjct: 291 TIEDCWDQDAEARLTAQ 307
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 85.4 bits (211), Expect = 4e-19
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 26/191 (13%)
Query: 368 PIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMR 427
P + + + + R + + EL L F +G ++ E +
Sbjct: 18 PSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFK 75
Query: 428 QALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 487
Q A+ P + + A D G V F +FV A + + H+ +W
Sbjct: 76 QIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRW------ 129
Query: 488 AFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADIDKDGR 529
F +DI++DG+I EE+ + +D ++ D +KDG
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 530 ISLSEFRRLLR 540
++L EF +
Sbjct: 190 VTLDEFLESCQ 200
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-19
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 43/239 (17%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
R + T+ + LG G FG Y VA + RVA+K + + + E
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEA 79
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVR 206
+++ +VV+ + MEL G+L + + + A +
Sbjct: 80 SVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 207 QMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
+M+++A E +L + VHRD+ N + ED ++K DFG++ +
Sbjct: 139 KMIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMT---------R 186
Query: 260 DIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
DI + YY +PE LK SDVWS GV+ + I +P+ +
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 4e-19
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 445 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+I +AI G D+ F + + ++ FE D D+ GFI E
Sbjct: 10 DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQ------VK--EVFEILDKDQSGFIEEE 61
Query: 504 ELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
EL+ G + LL D D DG+I EF +++ A
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 4e-11
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 448
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 449 AIDCNTDGLVDFSEFVA 465
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 5e-19
Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 39/226 (17%)
Query: 99 TIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
I + LG G FG + + VA+K +++ E++ RE +I+ L
Sbjct: 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLD- 68
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+ +V+ + + ME+ GG L L K + V + +V+
Sbjct: 69 NPYIVRLI-GVCQAEALMLVMEMAGGGPLHKF-LVGKREEIPVSN---VAELLHQVSMGM 123
Query: 216 H---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---- 268
VHRD+ N L K +DFGLS + +YY
Sbjct: 124 KYLEEKNFVHRDLAARNVL---LVNRHYAKISDFGLSKALG--------ADDSYYTARSA 172
Query: 269 --------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
APE + RK SDVWS GV + L G++P+
Sbjct: 173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 6e-19
Identities = 60/288 (20%), Positives = 102/288 (35%), Gaps = 60/288 (20%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + N Q+ P GK D ++ +GK +G G
Sbjct: 2 HHHHHHSSGVDLG--------TENLYFQSMPFPEGKVLDDM----EGNQWVLGKKIGSGG 49
Query: 109 FGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-- 164
FG Y+A ++ A K+E + + E+K Q +A + + K+
Sbjct: 50 FGLIYLAFPTNKPEKDARHVVKVEYQE------NGPLFSELKFYQRVAKKDCIKKWIERK 103
Query: 165 ----------------AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
F+ +Y ++ ME G L +I ++ + + + +M
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKIS-GQNGTFKKSTVLQLGIRM 160
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI------- 261
L V H + VH D+K N L K + D+GLS P +
Sbjct: 161 LDVLEYIHENEYVHGDIKAANLLL-GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKG 219
Query: 262 -VGSAYYVAPEVLKRKSGPE----SDVWSIG-VITYILLCGRRPFWDK 303
G+ + + + K G SDV +G + LCG+ P W++
Sbjct: 220 HNGTIEFTSLDAHK---GVALSRRSDVEILGYCMLR-WLCGKLP-WEQ 262
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 7e-19
Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 47/230 (20%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG + G+ V +K IE + + V + + +L
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLD 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H ++V+ + + + + G LLD + + + + + +L +
Sbjct: 74 -HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGA--------LGPQLLLNWGVQ 123
Query: 215 -----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L HG+VHR++ N L K S ++ DFG++D + P
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVL---LKSPSQVQVADFGVADLLPP--------DDKQL 172
Query: 268 V-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 304
+ A E + K +SDVWS GV + ++ G P+
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 7e-19
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
LK++ V L A EF A + + ++ AF D D+
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLASKSLDD------VK--KAFYVIDQDKS 55
Query: 498 GFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
GFI +EL++ + + L + D D DG I + EF +++
Sbjct: 56 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 6e-11
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 452
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 32 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 91
Query: 453 NTDGLVDFSEFVA 465
+ DG++ EF A
Sbjct: 92 DGDGMIGVDEFAA 104
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 9e-19
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 43/247 (17%)
Query: 90 YDKDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+++G G FG Y T N + AVK + + V
Sbjct: 18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLT 75
Query: 146 EVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E I++ H NV+ + + + + G+L + + + T KD +
Sbjct: 76 EGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKD---L 130
Query: 205 VRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+ L+VA +L VHRD+ N + E ++K DFGL+ +D+
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCM---LDEKFTVKVADFGLA---------RDM 178
Query: 262 VGSAYYV--------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 305
YY A E L+ +K +SDVWS GV+ + ++ G P+ D
Sbjct: 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 238
Query: 306 DGIFKEV 312
I +
Sbjct: 239 FDITVYL 245
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 1e-18
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 460
+ + + F D G I + L + + + EI + VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDM 56
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 514
+F+ + + + F+ FD D G I ELR G K S
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEE-FV--KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113
Query: 515 IDPLLEEADIDKDGRISLSEFRRLL 539
+D LL+ + DG ++ +F +++
Sbjct: 114 MDELLKGVPVK-DGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 8e-08
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ + F D D G I + E+R L L KL + E+L+ + DG+V
Sbjct: 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMV 128
Query: 459 DFSEFV 464
++ +FV
Sbjct: 129 NYHDFV 134
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-18
Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 18/148 (12%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+E++ + + + G IS++ K L +I +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELY----GDN 63
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 514
+ + +++ + + D+ + L F FD + G++T +++ G +
Sbjct: 64 LTYEQYL--EYLSICVHDKDNVEE-LI--KMFAHFDNNCTGYLTKSQMKNILTTWGDALT 118
Query: 515 ---IDPLLEEADIDKDGRISLSEFRRLL 539
L + I F +
Sbjct: 119 DQEAIDALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-07
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
D+ E +L F D + G ++ +M+ L L + ++ L A ++ +
Sbjct: 81 DNVE--ELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAFS--SEDNI 135
Query: 459 DFSEFVAATLH 469
D+ F L
Sbjct: 136 DYKLFCEDILQ 146
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 3e-18
Identities = 48/245 (19%), Positives = 87/245 (35%), Gaps = 49/245 (20%)
Query: 94 FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
+ LG +FG Y A G+ VA+K ++ E+ + E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GPLREEFRHEA 63
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTEKD 200
+ L H NVV D + + C G+L +
Sbjct: 64 MLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 201 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253
+A+ + + A+ +L H +VH+D+ N L + ++K +D GL
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL---VYDKLNVKISDLGLF---- 175
Query: 254 PGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 299
+++ + YY APE + K +SD+WS GV+ + + G +P
Sbjct: 176 -----REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
Query: 300 FWDKT 304
+ +
Sbjct: 231 YCGYS 235
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 4e-18
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 30/179 (16%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
L + L L +EEL F + G I+ ++ + AK P ++
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ ++ D N DG +DF E+V A + + +W AF +D+D +G I+
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEW------AFSLYDVDGNGTIS 125
Query: 502 PEELR--------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
E+ + + + + + D +++ EF
Sbjct: 126 KNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 4e-18
Identities = 57/326 (17%), Positives = 105/326 (32%), Gaps = 43/326 (13%)
Query: 11 SGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQK 70
G ++++ R + + + K + Q
Sbjct: 3 PIDPMGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN 62
Query: 71 TNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD-RVAV 126
T + + P + +++G G FG Y D AV
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 127 KKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELL 185
K + + V E I++ + H NV+ + + + + G+L
Sbjct: 123 KSLNRITD--IGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 186 DRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLK 242
+ + + T KD ++ L+VA L VHRD+ N + E ++K
Sbjct: 180 N-FIRNETHNPTVKD---LIGFGLQVAKGMKFLASKKFVHRDLAARNCM---LDEKFTVK 232
Query: 243 ATDFGLSDFIKPGKKFQDIVGSAYYV--------------APEVLK-RKSGPESDVWSIG 287
DFGL+ +D+ + A E L+ +K +SDVWS G
Sbjct: 233 VADFGLA---------RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 283
Query: 288 VITY-ILLCGRRPFWDKTEDGIFKEV 312
V+ + ++ G P+ D I +
Sbjct: 284 VLLWELMTRGAPPYPDVNTFDITVYL 309
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 5e-18
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 49/244 (20%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
R + LG G FG + + VAVK + K A +D +RE
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREA 94
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKKDSRYTEKDA 201
++L L H+++V+F+ + + + E G+L
Sbjct: 95 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 202 AVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
+ + Q+L VA++ +L VHRD+ N L + +K DFG+S
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS----- 205
Query: 255 GKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
+DI + YY PE + RK ESDVWS GV+ + I G++P+
Sbjct: 206 ----RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
Query: 301 WDKT 304
+ +
Sbjct: 262 YQLS 265
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 7e-18
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 99 TIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+++G G FG Y D+A + A+K + + VE RE +++ L
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLN- 80
Query: 156 HENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ + ++ + G+LL + T KD ++ L+VA
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ-FIRSPQRNPTVKD---LISFGLQVARG 136
Query: 215 C-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--- 268
+L VHRD+ N + E ++K DFGL+ +DI+ YY
Sbjct: 137 MEYLAEQKFVHRDLAARNCM---LDESFTVKVADFGLA---------RDILDREYYSVQQ 184
Query: 269 -----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 314
A E L+ + +SDVWS GV+ + +L G P+ + + +
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 7e-18
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 19/118 (16%)
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 493
LK + + L A+ +G + +F A + + + +D ++ F+ D
Sbjct: 3 AKDLLKADDIKKALDAVK--AEGSFNHKKFFA-LVGLKAMSAND-----VK--KVFKAID 52
Query: 494 IDRDGFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
D GFI EEL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 53 ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 9e-11
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 448
+ D++ F AID D +G I EE++ L L ++ L+
Sbjct: 31 FALVGLKAMSAN--DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 449 AIDCNTDGLVDFSEFVA 465
A D + DG + EF
Sbjct: 89 AADKDGDGKIGIDEFET 105
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 9e-18
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 28/179 (15%)
Query: 382 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 439
K S+L + L L + D E+ F +G ++ E+ + + P+
Sbjct: 4 KTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSP 61
Query: 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
E + D + +G + F EF+ + + + AFE +D++ DG+
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE------KLSWAFELYDLNHDGY 115
Query: 500 ITPEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
IT +E+ + + + + D ++DG I+L EFR +
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 61/236 (25%), Positives = 90/236 (38%), Gaps = 56/236 (23%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREV 147
F R +GK LG G+FG AT G VAVK +++N P + D+ E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSEF 77
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---------------RILAKK 192
+L+ + H +V+K Y A D + + +E + G L
Sbjct: 78 NVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 193 DSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATD 245
S + A+ + ++ A + +L LVHRD+ N L E +K +D
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL---VAEGRKMKISD 193
Query: 246 FGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 288
FGLS +D+ YV A E L +SDVWS GV
Sbjct: 194 FGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 1e-17
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 50/245 (20%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
RR + + LG G FG ++A + VAVK ++ + A +D +RE
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREA 68
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTEKD 200
++L L HE++VKFY D + + + E + G+L + D + +
Sbjct: 69 ELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 201 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253
+ + QML +A++ +L VHRD+ N L + +K DFG+S
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL---VGANLLVKIGDFGMS---- 180
Query: 254 PGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 299
+D+ + YY PE + RK ESDVWS GVI + I G++P
Sbjct: 181 -----RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 300 FWDKT 304
++ +
Sbjct: 236 WFQLS 240
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-17
Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 26/161 (16%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
EL L F +G ++ E +Q A+ P + + A D G
Sbjct: 15 FTKRELQVLYRGFKNEX--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 507
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 126
Query: 508 --------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ +D ++ D +KDG ++L EF +
Sbjct: 127 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-17
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 19/113 (16%)
Query: 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 496
L ++ V L+A + ++ F A + + + AF D D+
Sbjct: 6 ILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKK--------AFFVIDQDK 55
Query: 497 DGFITPEELR--MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 540
GFI +EL+ + G+ L+ D D DG I + E+ L++
Sbjct: 56 SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 5e-11
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 452
L + D++ F ID DK+G I +E++ L L ++ L+A D
Sbjct: 33 KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDS 92
Query: 453 NTDGLVDFSEFVA 465
+ DG + E+ A
Sbjct: 93 DGDGAIGVDEWAA 105
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 3e-17
Identities = 63/328 (19%), Positives = 100/328 (30%), Gaps = 52/328 (15%)
Query: 10 VSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQER--AKNYQQLKTKQ 67
V ++ A A H H +R T +
Sbjct: 236 VEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPE 295
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDF------------DRRYTIGKLLGHGQFGYTYVA 115
+ S + +P D D LG G FG
Sbjct: 296 PARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQG 355
Query: 116 TDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173
+ + VA+K +++ E++ RE +I+ L + +V+ +
Sbjct: 356 VYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQL-DNPYIVRLI-GVCQAEALM 411
Query: 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENF 230
+ ME+ GG L L K + A ++ Q V+ VHR++ N
Sbjct: 412 LVMEMAGGGPLHKF-LVGKREEIPVSNVAELLHQ---VSMGMKYLEEKNFVHRNLAARNV 467
Query: 231 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 277
L K +DFGLS + +YY APE + RK
Sbjct: 468 L---LVNRHYAKISDFGLSKALG--------ADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 278 GPESDVWSIGVITY-ILLCGRRPFWDKT 304
SDVWS GV + L G++P+
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMK 544
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 4e-17
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 18/106 (16%)
Query: 445 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+I A+ C ++ F + + + ++ F D D+ GFI E
Sbjct: 11 DIESALSSCQAADSFNYKSFFSTVGLSSKTPDQ------IK--KVFGILDQDKSGFIEEE 62
Query: 504 ELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 540
EL+ + L D D DG+I + EF+ L++
Sbjct: 63 ELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 452
L + ++ F +D DK+G I EE++ L L + L A D
Sbjct: 33 TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 92
Query: 453 NTDGLVDFSEFVA 465
+ DG + EF +
Sbjct: 93 DGDGKIGVEEFQS 105
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 51/253 (20%), Positives = 90/253 (35%), Gaps = 57/253 (22%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
+ R + +G G FG + A + VAVK +++ D +RE
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREA 101
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---------------RILAKK 192
++ + N+VK + + E G+L + L+ +
Sbjct: 102 ALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 193 DSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + + L +A + +L VHRD+ N L E+ +K D
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL---VGENMVVKIAD 217
Query: 246 FGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY- 291
FGLS ++I + YY PE + + ESDVW+ GV+ +
Sbjct: 218 FGLS---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 292 ILLCGRRPFWDKT 304
I G +P++
Sbjct: 269 IFSYGLQPYYGMA 281
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-16
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
E +L T + + + + +++ + L F
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDML--PVMAEKMDVEEFVS-ELC--KGFSLLADPERHL 56
Query: 500 ITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRTAS 543
IT E LR ++G+ G ++ E D+D DG ++ +EF L+ S
Sbjct: 57 ITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-08
Identities = 14/83 (16%), Positives = 35/83 (42%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+E +++L F + + I+ E +R+ + + +++ D + DG +
Sbjct: 35 VEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94
Query: 459 DFSEFVAATLHVHQLEEHDSEKW 481
+ +EF + + D+E W
Sbjct: 95 NQTEFCVLMVRLSPEMMEDAETW 117
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-16
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 386 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 445
+ L + D EELA LR F A D +++G + EE R + L ++ +
Sbjct: 9 SGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEA 65
Query: 446 ILQAIDCNTDGLVDFSEFVA 465
+ Q +D + DG + F EF
Sbjct: 66 VFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-11
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEA 522
L+ + E LR + F D +R G + EE R ++ + + + +
Sbjct: 13 NLYFQGADGDGEELARLR--SVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRL 70
Query: 523 DIDKDGRISLSEFRRLLRTA 542
D D+DG I+ EF R +
Sbjct: 71 DADRDGAITFQEFARGFLGS 90
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 3e-16
Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAIDC 452
EE+ R F + + +S E+ L K + + + + ++ +D
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVMDS 58
Query: 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----M 507
+T G + F EF ++ + QA +++FD+DR G I EL
Sbjct: 59 DTTGKLGFEEFKYLWNNIKKW------------QAIYKQFDVDRSGTIGSSELPGAFEAA 106
Query: 508 HTGLKGSIDPLLEEADIDKDGRISLSEF 535
L + ++ D+ G + F
Sbjct: 107 GFHLNEHLYSMIIRRYSDEGGNMDFDNF 134
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-12
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 32/148 (21%)
Query: 372 SVLNNMRQFVKYSRLKQFALRALAS-----------TLDDEE-------LADLRDQFDAI 413
++LN + + F + S L EE + + +
Sbjct: 27 NILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQF 86
Query: 414 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473
DVD++G+I E+ A + + L E + ++ + G +DF F++ + + +
Sbjct: 87 DVDRSGTIGSSELPGAF-EAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAM 144
Query: 474 EEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
AF+ D D G I
Sbjct: 145 FR------------AFKSLDKDGTGQIQ 160
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 3e-16
Identities = 34/230 (14%), Positives = 63/230 (27%), Gaps = 36/230 (15%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKR-TDFGYDKDFDRRYTIGKLLGHG 107
H H H + T S +P G TD R++ +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMTTSLEA---LPTGTVLTDK-----SGRQWKLKSFQTRD 53
Query: 108 QFGYTYVATDKANGD--------RVAVKKIEKNKMILPIAVEDVKREVKILQALA----- 154
G Y A + + ++K ++ L +R K LQ
Sbjct: 54 NQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAKPLQVNKWKKLY 112
Query: 155 --GHENVVKFY-NAFEDDNYVYIAMELCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLR 210
+ D Y ++ + G L L +E+ V ++L
Sbjct: 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACRLLD 170
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
H + VH ++ EN + S + +G + ++
Sbjct: 171 ALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFA------FRYCP 213
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 5e-16
Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 45/239 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ +G +G G FG Y+A + VK + L E+K
Sbjct: 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL-------FTELKFY 87
Query: 151 QALAGHENVVKFYNA------------------FEDDNYVYIAMELCEGGELLDRILAKK 192
Q A E + K+ +Y ++ M+ G L +I
Sbjct: 88 QRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEAN 145
Query: 193 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252
R++ K + ++L + H H VH D+K N L + K + D+GL+
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL-NYKNPDQVYLVDYGLAYRY 204
Query: 253 KPGKKFQDI--------VGSAYYVAPEV-LKRKSGPESDVWSIG-VITYILLCGRRPFW 301
P + G+ + + + D+ +G + L G P W
Sbjct: 205 CPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ-WLTGHLP-W 261
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-15
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 452
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 453 NTDGLVDFSEFVA 465
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 5e-13
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 18/107 (16%)
Query: 445 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+I A+ C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 504 ELRM---HTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 541
EL+ L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-14
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 23/139 (16%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFS 461
L F ++ ++G I +E+++ L + ++ +D + G + F+
Sbjct: 4 LYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 518
EF ++ + F FD DR G + P+EL+ G + +
Sbjct: 63 EFKELWAVLNGW------------RQHFISFDSDRSGTVDPQELQKALTTMGFRLN-PQT 109
Query: 519 LEE--ADIDKDGRISLSEF 535
+ G+I+ ++
Sbjct: 110 VNSIAKRYSTSGKITFDDY 128
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 30/145 (20%)
Query: 372 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 416
L Y R + S T+ E L R F + D D
Sbjct: 25 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSD 84
Query: 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476
++G++ +E+++AL + ++L V I + T G + F +++A + + L +
Sbjct: 85 RSGTVDPQELQKAL-TTMGFRLNPQTVNSIAKRYS--TSGKITFDDYIACCVKLRALTD- 140
Query: 477 DSEKWHLRSQAAFEKFDIDRDGFIT 501
+F + D + G +
Sbjct: 141 -----------SFRRRDSAQQGMVN 154
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 486 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 534
F +DG I +EL+ +G+ G P ++ D D G + +E
Sbjct: 5 YGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63
Query: 535 FRRL 538
F+ L
Sbjct: 64 FKEL 67
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 1e-14
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E+ ++++ FD D +K GSI E++ A+ L + +K+ +LE++ D +G
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGY 59
Query: 458 VDFSEFVAATLHVHQLEEHD 477
+ F +F+ + +++ D
Sbjct: 60 IGFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEF 535
+ AF+ FD ++ G I EL+ M G I L+ E D + +G I +F
Sbjct: 10 KEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-14
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 496
L S + L+ DC +F + + E F D D+
Sbjct: 5 ILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSKKSSSQLKE--------IFRILDNDQ 54
Query: 497 DGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 541
GFI +EL+ + L AD D DG+I EF+ ++++
Sbjct: 55 SGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-14
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 370 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQA 429
+ +R ++ + + + L++ F +D D++G I +E++
Sbjct: 8 PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66
Query: 430 LAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
L + L S L A D + DG + EF
Sbjct: 67 LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 9e-14
Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 34/167 (20%)
Query: 398 LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 449
L +E+ +F +++ + E++ KE I +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELK-ANPFKE----RICRV 68
Query: 450 IDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 506
+ + F +F+ L V K H AF FD D DG + E+L
Sbjct: 69 FSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AFRIFDFDDDGTLNREDLSRL 123
Query: 507 ------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 540
+ S ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)
Query: 391 LRALASTLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQAL--------AKDLPWKLKES 441
L L+ D F D D +G+++ E++ + + L +
Sbjct: 84 LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475
+ IL+ D + DG ++ SEF
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 177
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-13
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 19/118 (16%)
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 493
+ L + + + A D +F + + D K F D
Sbjct: 2 MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMV--GLKKKSADDVK------KVFHILD 51
Query: 494 IDRDGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 542
D+ GFI +EL + L+ D D DG+I + EF L+ +
Sbjct: 52 KDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-13
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 365 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLE 424
+++ + + F + L + D++ F +D DK+G I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 425 EMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
E+ L L ++ A D + DG + EF
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-13
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+D + +L++ F D D+NG IS E+R + +L KL + V ++++ D + DG
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 458 VDFSEFVAATLHVHQLEEHDSEK 480
V++ EFV + V +
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWS 84
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 3e-11
Identities = 24/77 (31%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADID 525
++ D+E+ L+ AF+ FD D++G+I+ ELR ++ G K + ++ +++EAD+D
Sbjct: 2 HMDT-DAEE-ELK--EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57
Query: 526 KDGRISLSEFRRLLRTA 542
DG+++ EF +++ T
Sbjct: 58 GDGQVNYEEFVKMMMTV 74
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 23/154 (14%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAI 450
+ L F A ++G I +E+++ L + ++ +
Sbjct: 24 GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM--- 507
D + G + F+EF ++ + F FD DR G + P+EL+
Sbjct: 83 DRDMSGTMGFNEFKELWAVLNGW------------RQHFISFDTDRSGTVDPQELQKALT 130
Query: 508 HTGLKGSIDPLLEE--ADIDKDGRISLSEFRRLL 539
G + S + +G+I+ ++
Sbjct: 131 TMGFRLS-PQAVNSIAKRYSTNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 30/145 (20%)
Query: 372 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 416
L Y R + S T+ E L R F + D D
Sbjct: 56 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTD 115
Query: 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476
++G++ +E+++AL + ++L V I + T+G + F +++A + + L +
Sbjct: 116 RSGTVDPQELQKAL-TTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKLRALTD- 171
Query: 477 DSEKWHLRSQAAFEKFDIDRDGFIT 501
+F + D + G +
Sbjct: 172 -----------SFRRRDTAQQGVVN 185
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 38/185 (20%)
Query: 382 KYSRLKQFALRALAST--LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALA 431
SRL + L L +E+ +F +++ + E+
Sbjct: 27 SGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQ-----I 81
Query: 432 KDLPWKLKESRVLE-ILQAIDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 489
LP +LK + E I + + + F +F+ L V K H AF
Sbjct: 82 LSLP-ELKANPFKERICRVFSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AF 135
Query: 490 EKFDIDRDGFITPEELR--------MHTGLKGS-------IDPLLEEADIDKDGRISLSE 534
FD D DG + E+L + S ID +LEE+DID+DG I+LSE
Sbjct: 136 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 195
Query: 535 FRRLL 539
F+ ++
Sbjct: 196 FQHVI 200
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 8e-13
Identities = 94/622 (15%), Positives = 171/622 (27%), Gaps = 192/622 (30%)
Query: 37 HNHHARNDT-THKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH D T +HQ+Q+++ ++ F +FD
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFED------------------------AF--VDNFD 34
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + + + + I ++ AV R L L+
Sbjct: 35 CKDVQDMPKS--------ILSKEE------IDHI----IMSKDAVSGTLRLFWTL--LSK 74
Query: 156 HENVVK-FYNAFEDDNYVYIAMEL---CEGGELL-DRILAKKDSRYTEKDAAV---VVR- 206
E +V+ F NY ++ + ++ + ++D Y + V R
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 207 ----------QMLRVAAECHLHGL-----------VHRDMKPE-NFLFK--------SAK 236
LR A + G+ V K + FK
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 237 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-------LKRKSGPES-----DVW 284
++ L+ L D + + LK K +V
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ 254
Query: 285 SIGVITY------ILLCGRRPFWDK--TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ ILL R K T+ D + +K
Sbjct: 255 NAKAWNAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLLK 309
Query: 337 KLLVKD---PRARLTAAQALS-HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 392
L + PR + L+ +P S I I K+ +
Sbjct: 310 YLDCRPQDLPR------EVLTTNPRR-----LSIIAESIRDGLATWDNWKHVNCDKLT-T 357
Query: 393 ALASTLDDEELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAI 450
+ S+L+ E A+ R FD + V + I L+ L W + +S V+ ++
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT----ILLS--LIWFDVIKSDVMVVVN-- 409
Query: 451 DCNTDGLV--DFSEFVAATLHVHQLEE----------HDS-----------EKW------ 481
+ LV E ++ LE H S +
Sbjct: 410 KLHKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 482 -----------HLRSQAAFEKFDIDRD-----GFITPEELRMHTGL----KGSIDPLLEE 521
HL++ E+ + R F+ +++R H GSI L++
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIR-HDSTAWNASGSILNTLQQ 526
Query: 522 ADIDKDGRISLSE--FRRLLRT 541
K I ++ + RL+
Sbjct: 527 LKFYKP-YICDNDPKYERLVNA 547
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-13
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
F IDV+ +G++S EE++ + E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 466 A 466
Sbjct: 61 F 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-10
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
+A F++ D++ DG ++ EE++ K + + + + D D +G I +EF +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 540 RT 541
+
Sbjct: 63 GS 64
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 390 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 431
+ + +++ L + F +ID D NG I E +
Sbjct: 25 FVSKKRAIKNEQLLQLI---FKSIDADGNGEIDQNEFAKFYG 63
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 9e-13
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEILQAIDCNTDGLVDFS 461
+ F A+ ++G + EE+++ L ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 518
F + W + F D D G + ELR G + S
Sbjct: 61 AFKELWAAL--------NAW----KENFMTVDQDGSGTVEHHELRQAIGLMGYRLS-PQT 107
Query: 519 LEE--ADIDKDGRISLSEF 535
L K+GRI ++
Sbjct: 108 LTTIVKRYSKNGRIFFDDY 126
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-11
Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 30/145 (20%)
Query: 372 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 416
L YS R + + + L ++ F +D D
Sbjct: 23 RCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQD 82
Query: 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476
+G++ E+RQA+ + ++L + I++ +G + F ++VA + + L +
Sbjct: 83 GSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKLRALTD- 138
Query: 477 DSEKWHLRSQAAFEKFDIDRDGFIT 501
F K D + G
Sbjct: 139 -----------FFRKRDHLQQGSAN 152
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 486 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 534
F +DG + EEL+ +G+ G+ P ++ D D G++ +
Sbjct: 3 YTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA 61
Query: 535 FRRL 538
F+ L
Sbjct: 62 FKEL 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 62.1 bits (152), Expect = 1e-12
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 463
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 464 VA 465
+
Sbjct: 60 TS 61
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 8e-11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 539
+ FEKFD ++DG ++ +E R + + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 540 R 540
Sbjct: 64 E 64
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-12
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 458 VDFSEFVA 465
+DF EF+
Sbjct: 73 IDFEEFLV 80
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 6e-09
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRL 538
+AAF+ FD D G I+ +EL M G + +D ++EE D D G I EF +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-12
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 387 KQFALRALASTLDD---EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 443
A R + + L + +F+ D K +IS EE R + L + +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQF 62
Query: 444 LEILQAIDCNTDGLVDFSEFVAA 466
+ + N G + + +F++
Sbjct: 63 DRLWNEMPVNAKGRLKYPDFLSR 85
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 7e-10
Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 17/97 (17%)
Query: 464 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDP 517
+ A LH + S + FE FD + I+ EE R + D
Sbjct: 11 ILARLH----KAVTSHYHAIT--QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDR 64
Query: 518 LLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 554
L E ++ GR+ +F + SS +
Sbjct: 65 LWNEMPVNAKGRLKYPDF-----LSRFSSETAATPMA 96
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-12
Identities = 11/92 (11%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 377 MRQFVKYSRLKQFAL---RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433
+Q + + + L + + +L ++++ D++ NG I + +++ L K
Sbjct: 2 AQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK- 60
Query: 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
L + +++ + + + +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-08
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 488 AFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 540
+ +FD++ +G I L+ + G+ + + L+ E S +F R++
Sbjct: 37 KYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-12
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCN 453
A+ +++AD F D + +G IS E+ AL V ++ ID +
Sbjct: 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSV---TPDEVRRMMAEIDTD 58
Query: 454 TDGLVDFSEFVAATLHVHQLEEHDSE 479
DG + F EF L + S+
Sbjct: 59 GDGFISFDEFTDFARANRGLVKDVSK 84
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 5e-09
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRL 538
+ F++FD + DG I+ EL LK + ++ E D D DG IS EF
Sbjct: 14 ERIFKRFDTNGDGKISSSELG--DALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 539 LRTASISSRNV 549
R ++V
Sbjct: 72 ARANRGLVKDV 82
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 4e-12
Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEILQAIDC 452
+ + A+L F +D + +G ++ E++ + L + ++++ D
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 453 NTDGLVDFSEFVA 465
N+DG + EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 3e-11
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Query: 486 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---------IDPLLEEADIDKDGRISLS 533
+AAF+K D + DG++T EL+ M T + L++ AD + DG+IS
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 534 EFRRL 538
EF
Sbjct: 70 EFLNA 74
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 5e-12
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 460
L DL+ F A D D +G I+++E+R+A+ L L + + +++ D + DG V++
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNY 61
Query: 461 SEFVA 465
EF
Sbjct: 62 EEFAR 66
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRI 530
+ L+ AF FD D DG IT +ELR G +D ++ EAD+D+DGR+
Sbjct: 3 AGLE-DLQ--VAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 59
Query: 531 SLSEFRRLLR 540
+ EF R+L
Sbjct: 60 NYEEFARMLA 69
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-12
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 459 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS- 514
E + +++ DSE+ +R AF D D +G+I+ ELR + G K +
Sbjct: 11 SSGENLYFQSL---MKDTDSEE-EIR--EAFRVEDKDGNGYISAAELRHVMTNLGEKLTD 64
Query: 515 --IDPLLEEADIDKDGRISLSEFRRLL 539
+D ++ EADID DG+++ EF +++
Sbjct: 65 EEVDEMIREADIDGDGQVNYEEFVQMM 91
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-10
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
D + ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 459 DFSEFVA 465
++ EFV
Sbjct: 83 NYEEFVQ 89
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 5e-11
Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+L + ++ D++ NG I + +++ L K L + +++ + ++
Sbjct: 42 DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEET 100
Query: 458 VDFSEFVA 465
+S+F+
Sbjct: 101 FSYSDFLR 108
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 4e-09
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 445 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 504
+ + ++ +D ++ +LE + + +FD++ +G I
Sbjct: 19 QQEERLEGINKQFLDDPKYSNDEDLPSKLEAF---------KVKYMEFDLNGNGDIDIMS 69
Query: 505 LR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
L+ + G+ + + L+ E + S S+F R++
Sbjct: 70 LKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 6e-11
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS----IDPLLEEADIDKD 527
D E+ + AF+ FD + DG I +E + G + ++ ++EAD D +
Sbjct: 3 RQDDEE-EIL--RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN 59
Query: 528 GRISLSEFRRLLR 540
G I + EF L++
Sbjct: 60 GVIDIPEFMDLIK 72
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 8e-11
Identities = 14/68 (20%), Positives = 33/68 (48%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
+ ++ ++ F D + +G I +E + + K L ++ V E ++ D + +G+
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 458 VDFSEFVA 465
+D EF+
Sbjct: 62 IDIPEFMD 69
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-10
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 459
EL + +++ A + D +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 460 FSEFVA 465
F EF
Sbjct: 66 FEEFQV 71
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-10
Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
E+L ++++ D++ G I L +++ + K L + +++ +
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDT 102
Query: 458 VDFSEFVA 465
+ + +FV
Sbjct: 103 ISYRDFVN 110
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDK 526
+E + + + + +FD++ +G I L+ M G+ + + ++ E
Sbjct: 40 SDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGV 99
Query: 527 DGRISLSEF 535
IS +F
Sbjct: 100 SDTISYRDF 108
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-10
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 488 AFEKFDIDRDGFITPEELR--MHT---GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 542
F++FD + DG I+ EL + T + ++ E D D DG I +EF
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67
Query: 543 SISSRNV 549
++V
Sbjct: 68 PGLMKDV 74
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 9e-09
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
D+ F D + +G ISL E+ AL L + V ++ ID + DG +DF+EF+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 465 A 465
+
Sbjct: 62 S 62
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 1e-09
Identities = 44/194 (22%), Positives = 71/194 (36%), Gaps = 16/194 (8%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIA----V 140
YD F R R +GK LG G FG A A G D+ A + KM+ A
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKMLKEGATHSEH 69
Query: 141 EDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 199
+ E+KIL + H NVV A + + + +E C+ G L + +K++ K
Sbjct: 70 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 129
Query: 200 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLSDFIKPGKK 257
RQ + D + S+ E+ SL + +
Sbjct: 130 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189
Query: 258 F--QDIVGSAYYVA 269
+ ++ ++ VA
Sbjct: 190 LTLEHLICYSFQVA 203
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 31/120 (25%)
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---------- 268
+HRD+ N L E + +K DFGL+ +DI YV
Sbjct: 213 KCIHRDLAARNILLS---EKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLK 260
Query: 269 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRN-----KPDF 319
APE + R +SDVWS GV+ + I G P+ D F L+ PD+
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 320
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 2e-09
Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 49/182 (26%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQ 151
+ + +G G FG + VA+K I + E++ E+ I +
Sbjct: 21 KLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78
Query: 152 ALAG--------HENVVKFYNAF------------------------------EDDNYVY 173
L+ E + + D+ ++
Sbjct: 79 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138
Query: 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLF 232
I +E GG L+++ K S A ++ Q+ A HRD+ N L
Sbjct: 139 IVLEFEFGGIDLEQMRTKLSS---LATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 195
Query: 233 KS 234
K
Sbjct: 196 KK 197
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-09
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 64/247 (25%)
Query: 92 KDFDRRYTIGK--LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKR-- 145
+FD R +G G FG Y K N VAVKK+ ++ I E++K+
Sbjct: 25 NNFDERPISVGGNKMGEGGFGVVY----KGYVNNTTVAVKKL---AAMVDITTEELKQQF 77
Query: 146 --EVKILQALAGHENVVKFYN-AFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKD 200
E+K++ HEN+V+ + + D+ VY G LLDR+
Sbjct: 78 DQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVY---VYMPNGSLLDRLSCLDG------- 126
Query: 201 AAVVVRQML----RV-----AAE--CHLH--GLVHRDMKPENFLFKSAKEDSSLKA--TD 245
L R AA LH +HRD+K N L D + A +D
Sbjct: 127 -----TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL-----DEAFTAKISD 176
Query: 246 FGLSDFIKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRP 299
FGL+ + +KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 177 FGLA---RASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPA 233
Query: 300 FWDKTED 306
D+ +
Sbjct: 234 V-DEHRE 239
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-08
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 459
EE+ + F A + IS EE++ + P LK L E+++ +D N DG V
Sbjct: 5 EEIKGAFEVFAAKE-GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63
Query: 460 FSEFVA 465
F EF+
Sbjct: 64 FEEFLV 69
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-08
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 487 AAFEKFDIDRD--GFITPEELRM--------HTGLKGSIDPLLEEADIDKDGRISLSEFR 536
AFE F I+ EEL++ ++D ++EE D + DG +S EF
Sbjct: 9 GAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 537 RLLRTAS 543
+++ S
Sbjct: 69 VMMKKIS 75
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 457 LVDFSEFVAA 466
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-06
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
F+ D +GFI + + L + + E +D DKDG ++L EF
Sbjct: 10 YYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEF 65
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ E A + F D D +G +S E+R+ K L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK---TGLPSTLLAHIWSLCDTKDCG 59
Query: 457 LVDFSEFVAA 466
+ +F A
Sbjct: 60 KLSKDQFALA 69
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-07
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
+ F K D D DGF++ E+R + TGL + + D G++S +F
Sbjct: 11 KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF 66
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 7e-08
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG Y A+G VAVK++++ + + EV+++ ++A H N+++
Sbjct: 37 ILGRGGFGKVYKGR-LADGTLVAVKRLKEER--TQGGELQFQTEVEMI-SMAVHRNLLRL 92
Query: 163 YNAFEDDNY---VYIAMELCEGGELLDRILAKKDSRY-----TEKDAAVVVRQMLRVAA- 213
VY G + + + +S+ + A+ +A
Sbjct: 93 RGFCMTPTERLLVY---PYMANGSVASCLRERPESQPPLDWPKRQRIALG-------SAR 142
Query: 214 -------ECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGKK--FQDIV 262
C ++HRD+K N L D +A DFGL+ + +
Sbjct: 143 GLAYLHDHCDPK-IIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 263 GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPF 300
G+ ++APE L KS ++DV+ GV+ L+ G+R F
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 64/237 (27%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
+FD ++ L+GHG FG Y K +G +VA+K+ +E+ + E++
Sbjct: 39 NNFDHKF----LIGHGVFGKVY----KGVLRDGAKVALKRRTPESSQ---GIEEFETEIE 87
Query: 149 ILQALAGHENVVKFYNAFEDDNY---VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
L H ++V ++ N +Y + E G L L D
Sbjct: 88 TLSFCR-HPHLVSLIGFCDERNEMILIY---KYMENGNLKRH-LYGSDLPTMSMSW---- 138
Query: 206 RQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK 256
Q L + +LH ++HRD+K N L D + TDFG+S K
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILL-----DENFVPKITDFGIS------K 187
Query: 257 KFQD---------IVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRP 299
K + + G+ Y+ PE + KS DV+S GV+ + +LC R
Sbjct: 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKS----DVYSFGVVLFEVLCARSA 240
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 1e-07
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ +E+ +QF ++ D + IS + K KL + I + D + DG
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWELSDADCDG 71
Query: 457 LVDFSEFVAA 466
+ EF AA
Sbjct: 72 ALTLPEFCAA 81
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-06
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
F D FI+ + + L + + E +D D DG ++L EF
Sbjct: 23 YYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEF 78
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 3e-07
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
+ ++ L A + E++ + R F+ D K G + E+ R L + + + E+
Sbjct: 703 TINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEA 761
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
I+ +D N G+V F F+ + + D+ + A+F+ D++ +IT
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFID--FMSRETADTDTAD---QVMASFKILAGDKN-YIT 815
Query: 502 PEELRMH 508
+ELR
Sbjct: 816 VDELRRE 822
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-07
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 401 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ L + D + ++ ++ +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 459 DFSEFV 464
+F EF+
Sbjct: 67 NFQEFL 72
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 3e-07
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 18/71 (25%)
Query: 488 AFEKFDIDRDGFITPEELR---MHTG---------------LKGSIDPLLEEADIDKDGR 529
F+ D D + + EL H L ID +L + D + DG
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 530 ISLSEFRRLLR 540
I +EF + L+
Sbjct: 133 IDYAEFAKSLQ 143
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 7e-05
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL------ 444
+ + + +EL F D D N + E+ A+ + E L
Sbjct: 57 INKPEAEMSPQEL--QLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDEL 114
Query: 445 -----EILQAIDCNTDGLVDFSEFVAA 466
+L+ D N DG +D++EF +
Sbjct: 115 INIIDGVLRDDDKNNDGYIDYAEFAKS 141
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ R F++ D +G ++ + R L + L ++++ I D + DG
Sbjct: 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWNLSDIDQDG 63
Query: 457 LVDFSEFVAA 466
+ EF+ A
Sbjct: 64 KLTAEEFILA 73
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-06
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
+ + F D G +T + R M + L + + + +DID+DG+++ EF
Sbjct: 15 KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEF 70
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 42/179 (23%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462
+ + F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLP-CQLHQVIVARFADDELIIDFDN 663
Query: 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT-------------------PE 503
FV + + L + F++ D + G I
Sbjct: 664 FVRCLVRLEILFK------------IFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEH 711
Query: 504 ELRMHTGLKGSIDPLLEEADI---------DKDGRISLSEFRRLLRTASISSRNVPPSP 553
H EE D +S +E +L ++
Sbjct: 712 HHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDG 770
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 21/112 (18%)
Query: 397 TLDDEELADL-------RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 449
L EE L + + + D++G+I E+ A + + L + ++
Sbjct: 790 KLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF-EAAGFHLN-QHIYSMIIR 847
Query: 450 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ G +DF F++ + + + AF D + G I
Sbjct: 848 RYSDETGNMDFDNFISCLVRLDAMFR------------AFRSLDKNGTGQIQ 887
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 2e-04
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 22/117 (18%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAI 450
+ EE R F + + +S E+ L K + + + + ++ +
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVM 783
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 507
D +T G + F EF L ++ +KW Q +++F+ DR G I EL
Sbjct: 784 DSDTTGKLGFEEF--KYLW------NNIKKW----QGIYKRFETDRSGTIGSNELPG 828
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-06
Identities = 10/54 (18%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 464
+ ++S +E+++ + K+L + + ++++++D N+D +DF E+
Sbjct: 20 SGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-06
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 409 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
++ + IS R+ L K+L L ++ +++Q +D N DG + F E+
Sbjct: 19 KYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-05
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLV 458
+ + F DK G ++ E++R + K+ P L+ + V +I++ +D DG V
Sbjct: 8 METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKV 66
Query: 459 DFSEFV 464
F F
Sbjct: 67 GFQSFF 72
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 1e-05
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 462
+ + + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
FV + + L + F++ D + G I
Sbjct: 662 FVRCLVRLEILFK------------IFKQLDPENTGTIQ 688
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 453
L+ T + ++ G + + L K L + + +I D +
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK---SGLPDLILGKIWDLADTD 57
Query: 454 TDGLVDFSEFVAA 466
G++ EF A
Sbjct: 58 GKGVLSKQEFFVA 70
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 486 QAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEFRRLLRT 541
+ + + + G + + +GL + + + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 542 ASISSRNVPPSPS 554
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 409 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 464
F + K S+S+ E ++ + + LP LK+ L E ++++D N D + F+E+
Sbjct: 30 TFARQEGRK-DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYW 85
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 403 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 456
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDN 71
Query: 457 LVDFSEFV 464
VDF E+
Sbjct: 72 EVDFQEYC 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 403 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 456
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68
Query: 457 LVDFSEFV 464
VDF E+
Sbjct: 69 EVDFQEYC 76
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 3e-05
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 471 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDP-------- 517
+L+ D +++ ++ F DI+ DG + +EL + + +
Sbjct: 10 EELDGLDPNRFNPKT--FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 67
Query: 518 ---------LLEEADIDKDGRISLSEF 535
+++ D ++D ++L EF
Sbjct: 68 EERLRMREHVMKNVDTNQDRLVTLEEF 94
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 4e-05
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL------------PWKLKESR--- 442
LD + + F D++ +G + +E+ K+L +++E R
Sbjct: 15 LDPNRF-NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 443 VLEILQAIDCNTDGLVDFSEFVAAT 467
+++ +D N D LV EF+A+T
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLAST 98
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 3e-05
Identities = 18/144 (12%), Positives = 38/144 (26%), Gaps = 28/144 (19%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR-----VLEILQAIDCNTDGLVDF 460
+ V + I +++ L ++L ++ ++ +G +D
Sbjct: 7 HHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQ 65
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP--- 517
EF + Q F+K G + +L +
Sbjct: 66 EEFARLW--------KRLVHY----QHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFI 112
Query: 518 ------LLEEADIDKDGRISLSEF 535
L+ D GR+S
Sbjct: 113 SRELLHLVTLRYSDSVGRVSFPSL 136
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 17/103 (16%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEILQAIDCNTDGLVDFS 461
+ F + G + ++ +A+ + +L ++ ++ G V F
Sbjct: 77 HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVSFP 134
Query: 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 504
V + + + + F D G E
Sbjct: 135 SLVCFLMRLEAMAK------------TFRNLSKDGKGLYLTEM 165
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-05
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 396 STLDDEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQA 449
+ ++ L + F + ++ E+++ L ++LP L + +++
Sbjct: 14 ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN 73
Query: 450 IDCNTDGLVDFSEFV 464
+D N D VDF E+
Sbjct: 74 LDSNRDNEVDFQEYC 88
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 6e-05
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ EE A QF ++ +G I+ ++ R + L + + +I D N DG
Sbjct: 26 AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ---SGLPQPVLAQIWALADMNNDG 81
Query: 457 LVDFSEFVAA 466
+D EF A
Sbjct: 82 RMDQVEFSIA 91
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 8e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
+ F GFIT ++ R +GL + + + AD++ DGR+ EF
Sbjct: 34 KHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEF 88
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-05
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
++ ++S E++Q L K+L +K + + EI Q +D N D VDF EF+
Sbjct: 22 SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 409 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
Q+ + DK + E+++ + +L L+E + V ++++ +D N DG DF EF+
Sbjct: 17 QYSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 403 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDG 456
+ L + F + +S +E++ L +L L V +I++ +D N DG
Sbjct: 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 457 LVDFSEFV 464
VDF EFV
Sbjct: 68 EVDFQEFV 75
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
A N IS E + +L + + + +++ +D ++DG +DF EF+
Sbjct: 23 AGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 2e-04
Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 33/175 (18%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--VLEILQ 448
L+ + + + ++ A + +F+ + VD G + + + + S +++
Sbjct: 15 LQFVTAKVGNDGWAAVEKRFNQLQVD--GVLLRSRFGKCI------GMDGSDEFAVQMFD 66
Query: 449 AID---CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 505
++ ++ E QL + + R + F+ D + DG +T EE+
Sbjct: 67 SLARKRGIVKQVLTKDELKDF---YEQLTDQGFDN---RLRTFFDMVDKNADGRLTAEEV 120
Query: 506 R--------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS 546
+ + ++EE D G I + + LL + +
Sbjct: 121 KEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEA 175
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 2e-04
Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 398 LDDEELAD--LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
+D + + D +K+ ++ +E++ K+L ++ + +I + D +
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKD-FLKELNIQVDDGYARKIFRECDHSQT 61
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 500
++ E L +E +AA + + +
Sbjct: 62 DSLEDEEIETF---YKML-TQRAEIDRAFEEAAGSAETLSVERLV 102
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 416 DKNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFV 464
++S +E+++ + K+L K ++ + +++ +D N D V+F E+V
Sbjct: 24 GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 63
Query: 457 LVDFSEFVAATLHVHQ 472
++D EF A V+
Sbjct: 64 MLDRDEFAVAMFLVYC 79
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 7e-04
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 484 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 535
+ A F+ +GF++ ++++ +++ L + + E +DID DG + EF
Sbjct: 16 KYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 70
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 409 QFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFV 464
++ DK + E+++ L K+L + +E + + +D N D VDF E+V
Sbjct: 18 EYAGRCGDKY-KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 4e-04
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 403 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 456
+ L F + +S E+++ L +L L + V +I+ +D N D
Sbjct: 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDN 68
Query: 457 LVDFSEFV 464
VDF+EFV
Sbjct: 69 EVDFNEFV 76
|
| >1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A* Length = 229 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 4e-04
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 474 EEHDSEKWHLRSQAAFEKFDIDR-DGFITPEELR----MHTGLKGSIDPLLEEADIDKDG 528
E + + F + D DG+++ EL ++ E D+D D
Sbjct: 146 PEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDK 205
Query: 529 RISLSEFRR 537
I+L E+
Sbjct: 206 YIALDEWAG 214
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} Length = 359 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 24/143 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV- 160
+ GQ T+ V K +LP A ++RE +++ ALAG + V
Sbjct: 44 EQFKGGQSNPTFKLVT-PGQTYVMRAKPGPKSKLLPSA-HAIEREYRVMDALAGTDVPVA 101
Query: 161 KFYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
K Y ED++ Y+ ME G L D+ L + + + +M RV A
Sbjct: 102 KMYALCEDESVIGRAFYI---MEFVSGRVLWDQSLP----GMSPAERTAIYDEMNRVIAA 154
Query: 215 CHLHGLVHRDM------KPENFL 231
+H + ++ + KP N+
Sbjct: 155 --MHTVDYQAIGLGDYGKPGNYF 175
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 38.4 bits (89), Expect = 8e-04
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 464
++ + +++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 22 SVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.92 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.92 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.89 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.88 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.88 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.87 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.87 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.87 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.87 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.86 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.86 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.85 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.84 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.84 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.84 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.84 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.84 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.83 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.83 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.83 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.83 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.83 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.83 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.83 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.82 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.82 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.82 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.82 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.82 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.82 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.82 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.82 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.81 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.81 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.81 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.81 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.8 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.8 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.79 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.79 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.79 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.79 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.78 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.78 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.78 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.78 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.78 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.77 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.77 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.77 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.76 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.76 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.76 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.75 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.75 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.74 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.74 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.73 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.73 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.73 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.72 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.72 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.72 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.72 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.71 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.71 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.71 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.71 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.71 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.7 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.7 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.7 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.7 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.69 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.69 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.69 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.68 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.67 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.66 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.65 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.65 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.62 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.61 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.59 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.59 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.58 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.57 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.56 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.56 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.55 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.54 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.54 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.54 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.54 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.53 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.52 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.49 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.48 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.48 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.48 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.48 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.47 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.44 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.41 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.38 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.36 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.36 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.33 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.33 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.33 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.32 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.31 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.29 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.29 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.26 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.26 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.24 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.23 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.22 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.21 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.2 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.2 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.2 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.19 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.19 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.18 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.17 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.16 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.16 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.15 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.14 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.14 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.14 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.13 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.13 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.12 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.12 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.12 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.12 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.12 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.11 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.11 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.11 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.09 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.09 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.09 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.08 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.08 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.08 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.08 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.08 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.08 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.08 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.08 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.08 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.08 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.07 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.06 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.06 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.04 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.03 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.03 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.03 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.03 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.02 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.01 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.01 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.01 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.01 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.01 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.01 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.01 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.01 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.01 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.01 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.01 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.01 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.0 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.0 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 98.99 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 98.99 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 98.99 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 98.99 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 98.99 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 98.99 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 98.99 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 98.99 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 98.98 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 98.98 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 98.97 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 98.97 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 98.97 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 98.96 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 98.96 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 98.96 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 98.96 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 98.96 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 98.96 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 98.96 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 98.95 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 98.95 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 98.95 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 98.95 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 98.95 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 98.94 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 98.94 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 98.94 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 98.94 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 98.94 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 98.94 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 98.93 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 98.93 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 98.93 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 98.93 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 98.93 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 98.93 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 98.92 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 98.92 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 98.92 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 98.91 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 98.91 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 98.91 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 98.91 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 98.91 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 98.91 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 98.91 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 98.9 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 98.9 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 98.9 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 98.9 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 98.89 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 98.89 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 98.89 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 98.88 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 98.87 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 98.87 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 98.86 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 98.86 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 98.86 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 98.86 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 98.86 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 98.86 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 98.85 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 98.85 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 98.84 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-76 Score=625.81 Aligned_cols=441 Identities=36% Similarity=0.605 Sum_probs=387.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEE
Confidence 4567899999999999999999999999999999999766544445677899999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||+.+|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||+|...
T Consensus 102 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999998853 467999999999999999999999999999999999999975556789999999999887
Q ss_pred CCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.........+||+.|+|||++.+.++.++|||||||++|+|++|++||.+.+..+....+..+...+..+.|+.+++++.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 259 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 259 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHH
T ss_pred ccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHH
Confidence 76666667789999999999998899999999999999999999999999999999999999888887777888999999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccCCC---CCCCccHHHHHHHHhhhhhhhhHHHHHHhhcccc-chHHhhhhcc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDA---SEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRD 408 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~---~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~ 408 (562)
+||.+||..||.+|||+.++|+||||+..... ...+.....+.++++|....++++.+...+...+ +++++.++.+
T Consensus 260 ~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~ 339 (484)
T 3nyv_A 260 DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTA 339 (484)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 99999999999999999999999999976532 2345566788899999999999998877777665 7899999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHh---hCCCccc-------HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 409 QFDAIDVDKNGSISLEEMRQALAK---DLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 409 ~F~~~D~~~~G~i~~~el~~~l~~---~~~~~~~-------~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
+|..+|.|++|.|+.+||..++.. .+|..++ +.++..+|+.+|.|++|.|+|+||+..+.......
T Consensus 340 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~---- 415 (484)
T 3nyv_A 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLL---- 415 (484)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHH----
T ss_pred HHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccC----
Confidence 999999999999999999655533 3577777 88999999999999999999999998776542211
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
....++.+|+.||+|+||+|+.+||+.++.... +++++|+.+|.|+||.|+|+||+++|...
T Consensus 416 --~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 416 --SRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp --HHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred --cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 135788999999999999999999999997533 48999999999999999999999999864
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-76 Score=628.16 Aligned_cols=442 Identities=35% Similarity=0.599 Sum_probs=372.3
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.++|++.+.||+|+||+||+|.+..+|+.||||++.+.... ......+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCE
Confidence 45667999999999999999999999999999999998654322 12457789999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||+|..
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999999988554 5799999999999999999999999999999999999998655677899999999988
Q ss_pred cCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
..........+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....+.+..+..+...+..+.|+.+++++
T Consensus 174 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 253 (486)
T 3mwu_A 174 FQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253 (486)
T ss_dssp BCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHH
T ss_pred CCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHH
Confidence 77666666778999999999999888999999999999999999999999999999999999988877777888899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCCCCC----CCccHHHHHHHHhhhhhhhhHHHHHHhhcccc-chHHhhhh
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE----IPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADL 406 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~----~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l 406 (562)
.+||.+||..||.+|||+.++|+||||+....... .+.....+.++++|....++++..+..+...+ +++++.++
T Consensus 254 ~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l 333 (486)
T 3mwu_A 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQL 333 (486)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999999999999999998654432 22334567788999888888888877777665 88999999
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHh---hCCCccc----------HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~---~~~~~~~----------~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
.++|..+|.|+||.|+.+||..++.. .+|..++ ++++..+|+.+|.|++|.|+|+||+..+......
T Consensus 334 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~ 413 (486)
T 3mwu_A 334 TEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTIL 413 (486)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTT
T ss_pred HHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhcc
Confidence 99999999999999999999766643 2466555 8899999999999999999999998776543222
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.. ...++.+|+.||+|+||+|+.+||+.++...+ +++++|..+|.|+||.|+|+||+++|....
T Consensus 414 ~~------~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 483 (486)
T 3mwu_A 414 LS------RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFV 483 (486)
T ss_dssp CC------HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHHC
T ss_pred ch------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhh
Confidence 11 24688899999999999999999999998776 589999999999999999999999998753
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-75 Score=626.30 Aligned_cols=442 Identities=35% Similarity=0.583 Sum_probs=383.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch----------hhHHHHHHHHHHHHHccCCCCcce
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP----------IAVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
..+.++|.+++.||+|+||+||+|.++.+++.||||++.+...... ...+.+.+|+.+++.| +||||++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~ 110 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIK 110 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCC
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCe
Confidence 4567899999999999999999999999999999999876543211 2457789999999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 162 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+++++.+...+|+|||||+||+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+....+
T Consensus 111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999999988554 569999999999999999999999999999999999999864444579
Q ss_pred EEeeccCccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC
Q 008547 242 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 321 (562)
||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+++..+..+...+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 99999999887766666778899999999999888899999999999999999999999999999999999988877776
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCC---CCccHHHHHHHHhhhhhhhhHHHHHHhhcccc
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE---IPIDISVLNNMRQFVKYSRLKQFALRALASTL 398 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~---~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~ 398 (562)
..|+.+++++.+||.+||.+||.+|||+.++|+||||+....... .......+.++++|....++++.....+...+
T Consensus 269 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~ 348 (504)
T 3q5i_A 269 NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKL 348 (504)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHT
T ss_pred cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 677889999999999999999999999999999999998654332 11224567788888888899888877777665
Q ss_pred -chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhC--------CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 399 -DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL--------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 399 -~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~--------~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+++++.+++++|..+|.|++|.|+.+||..++.. + +...++.++..+|..+|.|++|.|+|+||+..+..
T Consensus 349 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 427 (504)
T 3q5i_A 349 TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNV-LRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMD 427 (504)
T ss_dssp SCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHH-hhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 8899999999999999999999999999999855 4 56788899999999999999999999999987764
Q ss_pred hhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 470 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...... ...++.+|+.||+|+||+|+.+||+.++...+ +++++|..+|.|+||.|+|+||+.+|+..+
T Consensus 428 ~~~~~~------~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 428 KQILFS------EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HHHHTC------HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred hhcccC------HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 422111 24788899999999999999999999998644 489999999999999999999999998754
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-76 Score=626.84 Aligned_cols=442 Identities=36% Similarity=0.610 Sum_probs=382.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.++|++++.||+|+||.||+|.++.++..||+|++.+.... ......+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 110 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRN 110 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence 34667899999999999999999999999999999998765432 22356788999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||+|..
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999999988544 5699999999999999999999999999999999999998655567899999999988
Q ss_pred cCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
..........+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....++...+..+...+..+.|+.+++.+
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 268 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHH
T ss_pred CCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHH
Confidence 77666666778999999999998888999999999999999999999999999999999999988888888888999999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCCC----CCCCccHHHHHHHHhhhhhhhhHHHHHHhhcccc-chHHhhhh
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDA----SEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADL 406 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~----~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l 406 (562)
.+||.+||..||.+|||+.++|+||||+..... ...+.....+.++++|....++++..+..++..+ +++++.++
T Consensus 269 ~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l 348 (494)
T 3lij_A 269 KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKEL 348 (494)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHH
Confidence 999999999999999999999999999875322 2345556778899999999999888877777766 88999999
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhC-------CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~-------~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
+++|..+|.|++|.|+.+||..++.... +...++.++..+|+.+|.|++|.|+|+||+.++........
T Consensus 349 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~---- 424 (494)
T 3lij_A 349 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS---- 424 (494)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC----
T ss_pred HHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcccc----
Confidence 9999999999999999999999996531 23566899999999999999999999999987654422211
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++.+|+.||+|+||+|+.+||+.++.... +++++|+.+|.|+||.|+|+||+.+|++.+
T Consensus 425 --~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 425 --KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp --HHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 24688899999999999999999999997532 489999999999999999999999999764
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-62 Score=485.49 Aligned_cols=256 Identities=33% Similarity=0.580 Sum_probs=230.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|+.| +|||||+++++|.+++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEE
Confidence 4699999999999999999999999999999999865443444567899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||+||+|.+++... +.+++..++.++.||+.||+|||++|||||||||+||||+ .++++||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc---CCCCEEEEEcCCceecCCC
Confidence 9999999999998543 6799999999999999999999999999999999999998 5789999999999876433
Q ss_pred ---CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 ---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ---~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
....+.+||+.|||||++.+. ++.++|||||||+||+|++|++||.+.+..+++.++......++ ..+++++
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~ 261 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKA 261 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHH
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHH
Confidence 234578999999999999764 68899999999999999999999999999999999998876554 4689999
Q ss_pred HHHHHHcCccCccCCCCHHH------HhcCcccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 361 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~------~l~hp~f~~~ 361 (562)
++||.+||..||++|||+.| +++||||+..
T Consensus 262 ~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 99999999999999999987 5899999874
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-62 Score=474.69 Aligned_cols=255 Identities=33% Similarity=0.628 Sum_probs=212.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||||++.+...........+.+|+.+|+.| +|||||++++++.+.+.+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 4799999999999999999999999999999999876655555667899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||| +|+|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+||||+ .++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCCEEEeecCCCeecCCC
Confidence 9999 6899998854 46799999999999999999999999999999999999998 5789999999999887666
Q ss_pred CCcccccCCCcccCchhcccC-C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
....+.+||+.|||||++.+. + +.++|||||||++|+|++|+.||.+.+...++..+..+...++ ..+|+++++
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 241 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAG 241 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHH
Confidence 666778999999999999765 3 5789999999999999999999999998888888888765543 468999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
||.+||+.||++|||+.++++||||+..
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHHcCcccccC
Confidence 9999999999999999999999999853
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-61 Score=482.83 Aligned_cols=258 Identities=33% Similarity=0.573 Sum_probs=229.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
...|++.+.||+|+||+||+|.++.+|+.||||++...... ..+.+.+|+.+|+.| +|||||+++++|.+++.+||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~i 148 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWV 148 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 35799999999999999999999999999999999765432 345678999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+||||+ .++++||+|||+|+.+..
T Consensus 149 vmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp EECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEEEecCcCceecCC
Confidence 9999999999998743 4699999999999999999999999999999999999998 578999999999987654
Q ss_pred C-CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 G-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. ....+.+||+.|||||++.+ .++.++|||||||+||||++|++||.+.+..+++..+..... .....++.+|++++
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~ 301 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLK 301 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHH
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHH
Confidence 3 44567899999999999875 469999999999999999999999999988888888876543 23334567999999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+||.+||..||++|||+.++|+||||++...
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 9999999999999999999999999997654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-62 Score=488.21 Aligned_cols=258 Identities=24% Similarity=0.497 Sum_probs=226.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++| +|||||++++++.+++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence 479999999999999999999999999999999987654 344577899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||+||+|.+++.......+++..++.|+.||+.||.|||++|||||||||+||||+ .++.|||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEEcccccceeecCC
Confidence 9999999999999777667789999999999999999999999999999999999998 5789999999999876543
Q ss_pred C-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
. .....+||+.|||||++.+. ++.++|||||||+||||++|++||.+.+..+++.++..+... +.+..+|+++.+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~---~~~~~~s~~~~~ 255 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---CCCTTSCHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCCccCCHHHHH
Confidence 2 23457899999999998764 688999999999999999999999999999999998887532 234578999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
||.+||..||++|||+.++|+||||+..
T Consensus 256 li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 9999999999999999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=469.15 Aligned_cols=254 Identities=21% Similarity=0.353 Sum_probs=217.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----CCeEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVY 173 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----~~~~~ 173 (562)
|++.+.||+|+||+||+|.++.++..||+|++..... .....+.+.+|+.+|++| +|||||+++++|.+ +..+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEE
Confidence 4788899999999999999999999999999976543 334567899999999999 59999999999864 45689
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
||||||+||+|.+++.. ...+++..++.++.||+.||.|||++| ||||||||+||||+. .++.+||+|||+|+.
T Consensus 106 lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGG
T ss_pred EEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC--CCCCEEEEeCcCCEe
Confidence 99999999999999854 367999999999999999999999998 999999999999974 468999999999986
Q ss_pred cCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhh-HHHHHHhCCCCCCCCCCCCCCHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.. .....+.+||+.|||||++.+.++.++|||||||+||||+||+.||.+..... +...+..+.. +...++.++++
T Consensus 182 ~~-~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 258 (290)
T 3fpq_A 182 KR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPE 258 (290)
T ss_dssp CC-TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHH
T ss_pred CC-CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC--CCCCCccCCHH
Confidence 44 33455779999999999999889999999999999999999999997765444 4444444322 22223457899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+.+||.+||..||++|||+.++|+||||++
T Consensus 259 ~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999999999999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-60 Score=485.52 Aligned_cols=259 Identities=33% Similarity=0.566 Sum_probs=230.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..+.|++++.||+|+||.||+|.++.+|+.||||++...... ..+.+.+|+.+|+.| +|||||+++++|.+++.+|
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ 224 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW 224 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEE
Confidence 446799999999999999999999999999999999765432 345688999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+||||+ .++.|||+|||+|+.+.
T Consensus 225 iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCEEECCCTTCEECC
T ss_pred EEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEecCccceECC
Confidence 99999999999998743 4699999999999999999999999999999999999998 57899999999998765
Q ss_pred CC-CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. ....+.+||+.|||||++.+ .++.++|||||||++|||++|++||.+.+..+.+..+..... .....+..+|+++
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~ 377 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSL 377 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHH
T ss_pred CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHH
Confidence 43 34567899999999999875 469999999999999999999999999998888888876543 2334457899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
++||.+||..||++|||+.++|+||||++...
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 99999999999999999999999999998654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-60 Score=468.11 Aligned_cols=255 Identities=28% Similarity=0.489 Sum_probs=218.3
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|++++.||+|+||+||+|++. .+++.||||++.+..... .....+.+|+.+|++| +|||||++++++.+++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCC-CCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence 47999999999999999999874 468899999997654322 1234678899999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||||||+||+|.+++... +.+++..++.++.||+.||.|||++|||||||||+|||++ .++++||+|||+|+..
T Consensus 102 ~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSCEEEESSEEEEC-
T ss_pred EEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---CCCCEEecccccceec
Confidence 9999999999999998543 6799999999999999999999999999999999999998 5789999999999865
Q ss_pred CC-CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.. .....+.+||+.|||||++.+ .++.++|||||||+||||++|++||.+.+..+++..+......++ +.+|++
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~ 252 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPE 252 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHH
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHH
Confidence 43 334567899999999999875 468999999999999999999999999999999999988765543 468999
Q ss_pred HHHHHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+.+||.+||+.||++||| ++++++||||+..
T Consensus 253 ~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 253 AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 999999999999999998 4799999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-59 Score=464.59 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=219.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..|.+.++||+|+||+||+|+++.+|+.||||++..... ..+|+.+|+.| +|||||++++++.+++.+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGL-SSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999999999999999976543 14699999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC-CeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~-~vkl~DfG~a~~~~~ 254 (562)
||||+||+|.+++... +.+++..++.++.||+.||.|||++|||||||||+||||+. ++ ++||+|||+|+.+..
T Consensus 129 mEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS---DGSRAALCDFGHALCLQP 203 (336)
T ss_dssp ECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT---TSCCEEECCCTTCEEC--
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeC---CCCEEEEeeCCCCeEccC
Confidence 9999999999998543 67999999999999999999999999999999999999984 44 699999999987654
Q ss_pred CCC------cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 255 GKK------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 255 ~~~------~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... ....+||+.|||||++.+. ++.++|||||||+||||++|++||.+.+...++..+....+.+. ..++.+
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~ 282 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSC 282 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTS
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccC
Confidence 321 2346899999999998764 68999999999999999999999999888888888887664332 234679
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHH-------------hcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQA-------------LSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~-------------l~hp~f~~~~ 362 (562)
|+++.+||.+||..||.+|||+.|+ |+|||+++..
T Consensus 283 s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence 9999999999999999999999997 6799998764
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-57 Score=464.75 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=222.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----- 168 (562)
+.++|++++.||+|+||+||+|.++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccc
Confidence 45689999999999999999999999999999999976543 334567788999999999 59999999998764
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+.+|||||||+ |+|.+++ ...+.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i--~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~---~~~~~Ki~DFG 203 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQII--HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFG 203 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHH--TSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEECCCT
T ss_pred cCCEEEEEEeCCC-CCHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC---CCCCEEEeecc
Confidence 467999999996 6798888 4457899999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCC-----CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+|+.+... ....+.+||+.|+|||++.+ .++.++||||+||++|||++|++||.+.+..+.+..+......+.
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99875432 23456799999999999865 358899999999999999999999999988888777754322111
Q ss_pred C-----------------------C----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 321 R-----------------------K----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 321 ~-----------------------~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
. . .++.+++++.+||.+||.+||.+|||+.++|+||||++...
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence 1 1 12467899999999999999999999999999999997643
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=456.04 Aligned_cols=256 Identities=27% Similarity=0.494 Sum_probs=210.7
Q ss_pred cccceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
+.++|++.+.||+|+||+||+|.++ .+++.||||++.+.. ....+.+|+.+|+.+.+|||||+++++|.+.+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 4568999999999999999999875 467899999986543 34567899999999977999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
++||||||++||+|.+.+ ..+++..++.++.||+.||.|||++|||||||||+|||++. +.+.+||+|||+|+
T Consensus 94 ~~~lvmE~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEEECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCE
T ss_pred EEEEEEeCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CCCeEEECcCCCCc
Confidence 999999999999999987 35999999999999999999999999999999999999984 34789999999997
Q ss_pred ccCCCC-----------------------------CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCC
Q 008547 251 FIKPGK-----------------------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRP 299 (562)
Q Consensus 251 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~p 299 (562)
...... ...+.+||+.|+|||++.+ .++.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 543221 1234689999999999865 368899999999999999999999
Q ss_pred CCCCC-hhhHHHHHHhC--------------------------------------C------------CCCCCCCCCCCC
Q 008547 300 FWDKT-EDGIFKEVLRN--------------------------------------K------------PDFRRKPWPSIS 328 (562)
Q Consensus 300 f~~~~-~~~~~~~~~~~--------------------------------------~------------~~~~~~~~~~~~ 328 (562)
|.... ..+.+..+... . .......|+.+|
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 96554 33333322110 0 001123466789
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+++.+||.+||.+||++|||++|+|+||||++.
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999864
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=472.88 Aligned_cols=263 Identities=34% Similarity=0.624 Sum_probs=239.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+-++|++++.||+|+||+||+|.++.+|+.||||++.... ....+.+.+|+.+|+.| +|||||+++++|.+.+.+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence 4468999999999999999999999999999999987643 33567789999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+||+|++++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. ..+.+||+|||+|+.+.
T Consensus 231 iv~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 231 MIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECC
T ss_pred EEEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEcc
Confidence 99999999999998843 33579999999999999999999999999999999999999842 35789999999999988
Q ss_pred CCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
........+||+.|||||++.+. ++.++|||||||++|+|++|++||.+.+..+++..+......++...|+.+|++++
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 388 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 77777788999999999998764 58899999999999999999999999999999999998887777777889999999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||.+||..||.+|||+.++|+||||+...
T Consensus 389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~ 418 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 418 (573)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred HHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence 999999999999999999999999999754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-56 Score=439.01 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=198.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~----- 170 (562)
.+|++++.||+|+||+||+|.++.+|+.||||++.... .....+.+.+|+.+|++| +|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccc
Confidence 36999999999999999999999999999999997543 344567899999999999 5999999999987543
Q ss_pred -------eEEEEEeccCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 171 -------YVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 -------~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
.+|||||||+||+|.+++..... ...++..++.++.||+.||.|||++|||||||||+||||+ .++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~---~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC---CCCcEE
Confidence 47999999999999998854321 2345667899999999999999999999999999999998 478999
Q ss_pred EeeccCccccCCCC-------------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-h
Q 008547 243 ATDFGLSDFIKPGK-------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-G 307 (562)
Q Consensus 243 l~DfG~a~~~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~ 307 (562)
|+|||+|+...... ...+.+||+.|||||++.+ .++.++|||||||+||||++ ||.+.... .
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 99999998764332 1234689999999999876 46899999999999999996 77543322 2
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+..+.... ++ +.++..++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus 236 ~~~~~~~~~--~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 236 TLTDVRNLK--FP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHTTC--CC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHhcCC--CC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 222332221 11 1223456778999999999999999999999999999875
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-56 Score=437.25 Aligned_cols=253 Identities=22% Similarity=0.362 Sum_probs=216.2
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||+|+||+||+|.+. .+|..||||++... .....+.|.+|+.+|++| +|||||+++++|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCC
Confidence 46999999999999999999865 35788999999654 244667899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 171 YVYIAMELCEGGELLDRILAK-----------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
.+|||||||++|+|.+++... ....+++..+..++.||+.||.|||+++||||||||+||||+ .++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~---~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC---CCC
Confidence 999999999999999998643 235699999999999999999999999999999999999998 478
Q ss_pred CeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHh
Q 008547 240 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~ 314 (562)
.+||+|||+|+....... ....+||+.|||||++.+ .++.++|||||||+||||+| |+.||.+.+..+++..+..
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~ 245 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999999986544322 223579999999999864 57999999999999999998 9999999999888888887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+... +..+.+|+++.+||.+||+.||++|||+.++ ++|++.
T Consensus 246 ~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~ 286 (299)
T 4asz_A 246 GRVL---QRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN 286 (299)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred CCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence 6532 2235689999999999999999999999999 457654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-55 Score=432.01 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=204.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+++.+.+.||+|+||+||+|.+. ..||||+++... ......+.|.+|+.+|++| +|||||++++++.. +.+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEE
Confidence 46889999999999999999754 359999986543 2345678899999999999 59999999998865 568999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||+||+|.+++... ...+++..+..|+.||+.||.|||+++||||||||+||||+ .++.+||+|||+|+.....
T Consensus 110 mEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC----
T ss_pred EEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCceecccC
Confidence 9999999999988543 35799999999999999999999999999999999999998 5789999999999875432
Q ss_pred ---CCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC--CCCCCC
Q 008547 256 ---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR--RKPWPS 326 (562)
Q Consensus 256 ---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~ 326 (562)
......+||+.|||||++.+ .++.++|||||||+||||+||+.||.+.+.......+.......+ ...++.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 265 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence 23456789999999999853 367899999999999999999999988776555555544332221 223467
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+|+++.+||.+||+.||++|||+.++++
T Consensus 266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 266 CPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp SCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 8999999999999999999999998764
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-55 Score=467.36 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=217.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHH---HHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE---VKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E---~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|.+++.||+|+||+||+|+++.+|+.||||++.+...........+.+| +.+++.+ +|||||+++++|.+.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEE
Confidence 469999999999999999999999999999999976543322333444555 4455555 699999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||||||+||+|..++... +.+++..++.++.||+.||+|||++|||||||||+||||+ .+++|||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---CCCCEEecccceeeec
Confidence 9999999999999998543 6799999999999999999999999999999999999998 5889999999999876
Q ss_pred CCCCCcccccCCCcccCchhcc-c-CCCCCcchHHHHHHHHHHHhCCCCCCCCC---hhhHHHHHHhCCCCCCCCCCCCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... ...+.+||+.|||||++. + .++.++|||||||+||||++|++||.+.+ ...+...+......+ +..+
T Consensus 343 ~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~----p~~~ 417 (689)
T 3v5w_A 343 SKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL----PDSF 417 (689)
T ss_dssp SSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCC----CTTS
T ss_pred CCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC----CccC
Confidence 543 345679999999999985 3 47899999999999999999999997643 334555666655443 3568
Q ss_pred CHHHHHHHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
|+++++||.+||+.||.+|++ +.++++||||+..
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999999999999999999998 7999999999974
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-54 Score=433.02 Aligned_cols=249 Identities=21% Similarity=0.315 Sum_probs=208.6
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+.+.||+|+||+||+|.++ .+++.||||++... .....+.|.+|+.+|++| +|||||+++++|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTML-QHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence 46889999999999999999865 36889999999654 345678899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK-------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
.+|||||||++|+|.+++.... ..++++..+..|+.||+.||.|||+++||||||||+||||+ .
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~---~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---Q 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---T
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC---C
Confidence 9999999999999999885432 24699999999999999999999999999999999999998 5
Q ss_pred CCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHH
Q 008547 238 DSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~ 312 (562)
++.+||+|||+|+...... .....+||+.|||||++.+ .++.++|||||||+||||+| |+.||.+.+..+++..+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 273 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 8899999999998764332 2235689999999999865 46899999999999999998 99999999988888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+... +..+.+|+++.+||.+||+.||++|||+.++++
T Consensus 274 ~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 274 TQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp HHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred HcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 776422 223568999999999999999999999999975
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-54 Score=429.67 Aligned_cols=251 Identities=19% Similarity=0.270 Sum_probs=214.1
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..+++.+.||+|+||+||+|.+. .+++.||||++.... .....+.|.+|+.++++| +|||||+++++|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECC
Confidence 35789999999999999999853 467899999986543 233567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~ 236 (562)
.++||||||++|+|.++|.... ...+++..+..++.||+.||.|||+++||||||||+||||+
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~--- 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY--- 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC---
Confidence 9999999999999999986432 24589999999999999999999999999999999999998
Q ss_pred CCCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHH
Q 008547 237 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~ 311 (562)
+++.+||+|||+|+...... .....+||+.|||||++.+ .++.++|||||||+||||+| |..||.+.+..++...
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~ 259 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 47899999999998764322 2345689999999998764 57999999999999999998 8999999998888888
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+..+... +..+.+|+++.+|+.+||+.||++|||+.+++++
T Consensus 260 i~~~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 260 IRNRQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7765432 2235789999999999999999999999999763
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-53 Score=445.05 Aligned_cols=299 Identities=30% Similarity=0.605 Sum_probs=260.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.| +||||+++++++.+.+..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEE
Confidence 355789999999999999999999999999999999876543 234567789999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||++||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||+|...
T Consensus 86 ~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999988543 67999999999999999999999999999999999999986555788999999999876
Q ss_pred CCCC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+..+...++.+.|+.++++
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 243 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHH
Confidence 5433 3356789999999999876 4689999999999999999999999999999999999999888888888999999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 395 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~ 395 (562)
+.+||.+||..||.+|||+.++|+||||+..............+..+++|....+++..+...+.
T Consensus 244 ~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~ 308 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML 308 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEEC
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998754333334456678889999888888877665553
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-52 Score=429.94 Aligned_cols=299 Identities=30% Similarity=0.610 Sum_probs=260.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.++|.+.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.| +||||+++++++.+.+.
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~ 102 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF 102 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence 4456789999999999999999999999999999999976543 334567789999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||++||+|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++.....+.+||+|||++..
T Consensus 103 ~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EEEEECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEEEEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999999884 346799999999999999999999999999999999999998654557899999999988
Q ss_pred cCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
..........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++...|+.++++
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 260 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHH
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence 776666667799999999999876 4688999999999999999999999999988899999888888777778889999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhh
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 394 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~ 394 (562)
+.+||.+||..||.+|||+.++|+||||+..............+..+++|....+++..++..+
T Consensus 261 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 324 (362)
T 2bdw_A 261 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324 (362)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999865433333344566788888888777777655443
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-53 Score=429.90 Aligned_cols=254 Identities=24% Similarity=0.310 Sum_probs=212.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~- 168 (562)
.++|++++.||+|+||+||+|.+..+ ++.||||++.... .....+.+.+|+.+|.++.+|||||+++++|..
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 35899999999999999999987654 3679999987543 234567899999999999766999999999875
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
++.+|||||||++|+|.+++.... ...+++..+..++.||+.||.|||+++||||||||+|||++
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~- 219 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 219 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC-
Confidence 567999999999999999996532 24589999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||+|+.+..... ....+||+.|||||++.+ .++.++|||||||+||||+| |+.||.+....+.+
T Consensus 220 --~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~ 297 (353)
T 4ase_A 220 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297 (353)
T ss_dssp --GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred --CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478999999999987654332 235689999999998865 57899999999999999998 99999887665555
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
...+....... ..+.+++++.+||.+||+.||++|||+.++++|
T Consensus 298 ~~~i~~g~~~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 298 CRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 44444332222 224689999999999999999999999999876
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-51 Score=415.37 Aligned_cols=293 Identities=36% Similarity=0.636 Sum_probs=232.4
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.+++.+. ||||+++++++...+.
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 122 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE 122 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecCCe
Confidence 456678999999999999999999999999999999987543 3456789999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+++|+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||++..
T Consensus 123 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 123 ISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp EEEEECCCCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEEEEEeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999999999884 446799999999999999999999999999999999999998544578999999999987
Q ss_pred cCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh-HHHHHHhCCCCCCCCCCCCCCH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
..........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..... .+..+......+..+.++.++.
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 665545556789999999999876 46889999999999999999999998766544 6666777666666666788999
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhh
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 394 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~ 394 (562)
++.+||.+||..||++|||+.++|+||||+...... .........++.+....+++.......
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANF--VHMDTAQKKLQEFNARRKLKAAVKAVV 343 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCC--SCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccCCCccch--hhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999755332 223455677888888777777665543
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=420.18 Aligned_cols=267 Identities=36% Similarity=0.617 Sum_probs=236.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
..+..+|.+++.||+|+||.||+|.++.+|+.||+|++.+..... ....+.+.+|+.+++.+. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEe
Confidence 345678999999999999999999999999999999997654321 123577899999999995 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFG 247 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG 247 (562)
.+.+|+||||++||+|.+++ .....+++..+..++.||+.||.|||++||+||||||+|||++..+ ....+||+|||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l--~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHH--TTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred CCEEEEEEEcCCCCcHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999999988 3446799999999999999999999999999999999999997421 12279999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...|+.
T Consensus 165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (361)
T 2yab_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244 (361)
T ss_dssp SCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred CceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccC
Confidence 9988776666677899999999999876 568899999999999999999999999999999999988877776666778
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 245 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 99999999999999999999999999999999854
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-51 Score=411.47 Aligned_cols=258 Identities=35% Similarity=0.631 Sum_probs=231.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|++.+.||+|+||.||+|.+..+|+.||||++.+... .....+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEE
Confidence 3579999999999999999999999999999999976543 3445677899999999994 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 92 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTCCGGGSS
T ss_pred EEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCCCEEEeeccCceecCC
Confidence 99999999999988544 5799999999999999999999999999999999999998 578999999999988776
Q ss_pred CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+.+.......+..+...++ ..+++++.
T Consensus 167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 242 (328)
T 3fe3_A 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCE 242 (328)
T ss_dssp SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHH
Confidence 66677789999999999987654 4689999999999999999999999999888888888765443 35789999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+||.+||..||.+|||+.++++||||+....
T Consensus 243 ~li~~~L~~dP~~R~t~~eil~h~~~~~~~~ 273 (328)
T 3fe3_A 243 NLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273 (328)
T ss_dssp HHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred HHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence 9999999999999999999999999987543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=419.71 Aligned_cols=300 Identities=30% Similarity=0.567 Sum_probs=241.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++...... .....+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 3556899999999999999999999999999999998643211 112357789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.+|+||||++||+|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++..+....+||+|||+
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999998877543 234689999999999999999999999999999999999998654556799999999
Q ss_pred ccccCCCCC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 249 SDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 249 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
+........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+. .......+..+...+....|+.
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcccccc
Confidence 987654332 3456899999999998754 588999999999999999999999775 4556677777666555555678
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhh
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 394 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~ 394 (562)
+++++.+||.+||..||.+|||+.++|+||||+..............+..++++....+++......+
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 326 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAV 326 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC---------
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999875432222223345677777777666666555443
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-51 Score=416.81 Aligned_cols=257 Identities=28% Similarity=0.534 Sum_probs=224.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||+||+|.++.+|+.||||++.+.........+.+.+|+.+++.+.+||||+++++++.+.+.+|+|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999997654333445677889999999987799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-C
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~ 254 (562)
|||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|+... .
T Consensus 103 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCSCC-
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCCEEEccccceeecccC
Confidence 9999999999988544 5799999999999999999999999999999999999998 57899999999998643 2
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+......++ ..+++++.+
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ 253 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDATG 253 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHH
Confidence 334456789999999999865 478999999999999999999999999999999999988776554 358899999
Q ss_pred HHHHcCccCccCCCCH------HHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTA------AQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~------~~~l~hp~f~~~ 361 (562)
||.+||..||.+||++ .++++||||+..
T Consensus 254 li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 254 ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 9999999999999998 899999999874
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-51 Score=419.07 Aligned_cols=257 Identities=25% Similarity=0.479 Sum_probs=221.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..++.++.+||||+++++++.+.+.+|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 47999999999999999999999999999999998765544445567889999999886799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc-cCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~-~~~ 254 (562)
|||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|+. ...
T Consensus 132 ~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCCCCT
T ss_pred EEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCCEEEeecceeeecccC
Confidence 9999999999888543 5799999999999999999999999999999999999998 578999999999986 334
Q ss_pred CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCC---------ChhhHHHHHHhCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~ 324 (562)
.......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||... ....+...+......++
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---- 282 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---- 282 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC----
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC----
Confidence 4556678999999999998764 588999999999999999999999643 22335556666554443
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCH------HHHhcCcccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 361 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~------~~~l~hp~f~~~ 361 (562)
..+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 283 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 283 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 3589999999999999999999985 799999999864
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-51 Score=411.06 Aligned_cols=263 Identities=29% Similarity=0.548 Sum_probs=236.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||+|.+.... .....+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEE
Confidence 35678999999999999999999999999999999986442 3456788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||++||+|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. .++.+||+|||++...
T Consensus 77 ~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 77 VMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQL 154 (321)
T ss_dssp EEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeEC
Confidence 999999999999998732 23469999999999999999999999999999999999999842 2689999999999887
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
..........||+.|+|||++.+. ++.++|||||||++|+|++|..||.+....+....+......++...|+.+++++
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 234 (321)
T 1tki_A 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234 (321)
T ss_dssp CTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred CCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHH
Confidence 766666677899999999998765 4889999999999999999999999999999999999888777766677899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+||.+||..||.+|||+.++|+||||++..
T Consensus 235 ~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 9999999999999999999999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-51 Score=417.99 Aligned_cols=258 Identities=33% Similarity=0.519 Sum_probs=205.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|++.+.||+|+||.||+|.+..+|+.||||++..... ..+.+.+|+.+++.+. ||||+++++++.+.+.+|+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEE
Confidence 3589999999999999999999999999999999976543 2356789999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.. ..+.+||+|||+|+....
T Consensus 94 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 94 IMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC-----
T ss_pred EEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccccccc
Confidence 99999999999988543 569999999999999999999999999999999999999842 234699999999986544
Q ss_pred CCCcccccCCCcccCchhcccC-CC-CCcchHHHHHHHHHHHhCCCCCCCCChh----hHHHHHHhCCCCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SG-PESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~-~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.......+||+.|+|||++.+. ++ .++|||||||++|+|++|+.||.+.... .....+......+ +....++
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s 248 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI--PDDIRIS 248 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC--CTTSCCC
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC--CCcCCCC
Confidence 4445567899999999998654 33 4489999999999999999999875543 3334444433322 2334689
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+++.+||.+||..||.+|||+.++++||||....
T Consensus 249 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 9999999999999999999999999999997653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=407.87 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=227.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEE
Confidence 4799999999999999999999999999999999765332333567788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-C
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~ 254 (562)
|||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|+... .
T Consensus 84 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCCEEEeeccchhhcccC
Confidence 9999999999888543 5799999999999999999999999999999999999998 47899999999998643 3
Q ss_pred CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+...+...+......++ ..+++++.+
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 234 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHH
Confidence 3445677999999999998654 58999999999999999999999999888888888887765543 358999999
Q ss_pred HHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
||.+||..||.+|| ++.++++||||+..
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 99999999999999 99999999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-50 Score=405.84 Aligned_cols=266 Identities=36% Similarity=0.632 Sum_probs=233.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.+..+|.+.+.||+|+||.||+|.+..+|+.||+|++....... ....+.+.+|+.+++.+. ||||+++++++.+.
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENK 86 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECS
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEeC
Confidence 45678999999999999999999999999999999987654321 124577899999999995 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~ 248 (562)
..+++||||+++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++..+ ....+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred CEEEEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999999883 446799999999999999999999999999999999999998422 223899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
+............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+....++.+
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (326)
T 2y0a_A 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244 (326)
T ss_dssp CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccC
Confidence 988766555667789999999999875 4688999999999999999999999998888888888777666655555678
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 245 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 9999999999999999999999999999999864
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-50 Score=410.71 Aligned_cols=265 Identities=35% Similarity=0.594 Sum_probs=235.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+++.+ +||||+++++++.+...+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 123 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEM 123 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEE
Confidence 34568999999999999999999999999999999986543 23456788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. ..+.+||+|||++...
T Consensus 124 ~lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 124 VLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEecccceec
Confidence 999999999999988743 23469999999999999999999999999999999999999742 3578999999999887
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+....+.+..+......+....+..+++++
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 281 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 665555567899999999998754 5889999999999999999999999988888888888877777777778899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||.+||..||.+|||+.++|+||||+....
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 99999999999999999999999999997543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=408.00 Aligned_cols=257 Identities=28% Similarity=0.494 Sum_probs=227.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.++.+|+.||||++.+...........+..|..++..+.+||||+++++++.+.+.+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 57999999999999999999999999999999997653322334567889999999875799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|+....
T Consensus 97 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCCCCT
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCCEEEeEChhhhhcccC
Confidence 9999999999988543 5799999999999999999999999999999999999998 478999999999986432
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+....+.++ ..+++++.+
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 247 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKD 247 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHH
Confidence 334556799999999999876 458899999999999999999999999998888888888765543 358999999
Q ss_pred HHHHcCccCccCCCCHH-HHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTAA-QALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~-~~l~hp~f~~~ 361 (562)
||.+||..||.+||++. ++++||||+..
T Consensus 248 li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 248 LLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 99999999999999998 99999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-51 Score=404.47 Aligned_cols=247 Identities=23% Similarity=0.282 Sum_probs=188.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~---- 170 (562)
.++|.+.+.||+|+||+||+|.+ +|+.||||++.... ........|+..+.+| +|||||++++++..++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCce
Confidence 45799999999999999999975 68999999986542 1222334566666778 5999999999998643
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeccCCCCCCeE
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
.+|||||||++|+|.+++.. ..++++.+..++.|++.||.|||++ +||||||||+||||+ .++.+|
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~---~~~~~K 148 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCC 148 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC---TTSCEE
T ss_pred EEEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC---CCCCEE
Confidence 68999999999999999843 4689999999999999999999987 999999999999998 578999
Q ss_pred EeeccCccccCCCCC-----cccccCCCcccCchhcccC-------CCCCcchHHHHHHHHHHHhCCCCCCCCC------
Q 008547 243 ATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKT------ 304 (562)
Q Consensus 243 l~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~el~~g~~pf~~~~------ 304 (562)
|+|||+|+....... ....+||+.|||||++.+. ++.++|||||||+||||+||.+||....
T Consensus 149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 999999987654332 2346899999999998653 3568999999999999999987663221
Q ss_pred ---------hhhHHHHHHhCCCCCCCC-CC--CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 305 ---------EDGIFKEVLRNKPDFRRK-PW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 305 ---------~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.......+.........+ .+ ...++.+.+|+.+||..||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 112222232222111111 01 112346889999999999999999999974
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=394.23 Aligned_cols=266 Identities=34% Similarity=0.661 Sum_probs=226.8
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
...+.++|.+.+.||+|+||.||+|.+..+|..||+|++..... ....+.+.+|+.+++.+ +||||+++++++.+..
T Consensus 17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 93 (285)
T 3is5_A 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYH 93 (285)
T ss_dssp SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhC-CCchHHhHHHheecCC
Confidence 34566789999999999999999999999999999999876542 23457789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..++||||+++|+|.+.+... ....+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999999988543 346799999999999999999999999999999999999997544578899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
+.............||+.|+|||++.+.++.++||||||+++|+|++|+.||.+.........+......+... ...++
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 252 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLT 252 (285)
T ss_dssp CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCC
T ss_pred ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCC
Confidence 98776655556678999999999998888999999999999999999999999988887777776665544432 23478
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+++.+||.+||..||.+|||+.++|+||||++
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999999999999999999999985
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=420.14 Aligned_cols=259 Identities=28% Similarity=0.475 Sum_probs=225.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||+||+|.++.+|+.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999998754322222334578899999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|+.....
T Consensus 148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCTT
T ss_pred EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCCEEEeccceeEeeccC
Confidence 999999999998743 4689999999999999999999999999999999999998 5789999999999876544
Q ss_pred C--CcccccCCCcccCchhcccC-----CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 K--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
. .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+......+..+.++.++
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 301 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 301 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCccccc
Confidence 3 23467899999999998653 4689999999999999999999999999988988887754334444456799
Q ss_pred HHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
+++++||.+||+.+|.+ ||++.++++||||+..
T Consensus 302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 99999999999999998 9999999999999975
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=402.94 Aligned_cols=257 Identities=25% Similarity=0.469 Sum_probs=224.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+.+|+.+++.+.+||||+++++++.+.+.+|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999998776555666778899999999986799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-CC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-~~ 254 (562)
|||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|+.. ..
T Consensus 89 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEEeccccccccCC
Confidence 9999999999988543 5799999999999999999999999999999999999998 5789999999999863 33
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCC---------ChhhHHHHHHhCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~ 324 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||... ....+...+......++
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---- 239 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---- 239 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----
Confidence 444567799999999999876 4588999999999999999999999652 33345556666554433
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCH------HHHhcCcccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 361 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~------~~~l~hp~f~~~ 361 (562)
..+++++.+||.+||..||.+||++ .++++||||+..
T Consensus 240 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 240 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 3688999999999999999999995 899999999864
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=400.01 Aligned_cols=254 Identities=27% Similarity=0.551 Sum_probs=226.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEE
Confidence 4799999999999999999999999999999999765332233567788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||++.....
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCCEEEeecCcceecCC-
Confidence 999999999998854 46799999999999999999999999999999999999998 578999999999987543
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+......++ +.+++++.+|
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 233 (318)
T 1fot_A 159 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDL 233 (318)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred -ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 33456899999999998654 58899999999999999999999999988888888888765443 4688999999
Q ss_pred HHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|.+||..||.+|| ++.++++||||+..
T Consensus 234 i~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 9999999999999 99999999999864
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=390.63 Aligned_cols=267 Identities=32% Similarity=0.668 Sum_probs=239.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEE
Confidence 456789999999999999999999999999999999876543 334567788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++..+..+.+||+|||++...
T Consensus 81 ~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999999999888554 56999999999999999999999999999999999999986555567999999999877
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
..........||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+.........+......++.+.+..+++++
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHH
Confidence 666666667899999999998764 5889999999999999999999999999988998888888777777778899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||.+||..||.+|||+.++|+||||+....
T Consensus 239 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 239 KSLIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred HHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 99999999999999999999999999987643
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-50 Score=403.35 Aligned_cols=280 Identities=27% Similarity=0.492 Sum_probs=240.1
Q ss_pred CCCccccccccccccceeec-ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcc
Q 008547 82 CGKRTDFGYDKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160 (562)
Q Consensus 82 ~~~~~~~~~~~~~~~~y~i~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 160 (562)
......+...+.+..+|.+. +.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.+.+||||+
T Consensus 14 ~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv 92 (327)
T 3lm5_A 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVI 92 (327)
T ss_dssp --CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBC
T ss_pred cchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEE
Confidence 34445566667788899998 8999999999999999999999999998765432 234577899999999998789999
Q ss_pred eEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 161 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
++++++...+.+++||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++....++.
T Consensus 93 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp CEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCC
T ss_pred EEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999999998875555577999999999999999999999999999999999999985444689
Q ss_pred eEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 241 vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......+
T Consensus 173 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 252 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252 (327)
T ss_dssp EEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred EEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccccc
Confidence 99999999988766555566789999999999865 45889999999999999999999999999888888888877777
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
....++.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~ 295 (327)
T 3lm5_A 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295 (327)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence 7777788999999999999999999999999999999998754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-50 Score=406.88 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=227.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.++.+|+.||||++.+.........+.+.+|..++..+.+||||+++++++.+.+.+|+|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999997654323335677889999998886799999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC-C
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~-~ 254 (562)
|||++||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|+... .
T Consensus 100 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCCCCT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCcEEEEeCCcccccccC
Confidence 9999999999988543 5699999999999999999999999999999999999998 57899999999998643 3
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+......++ ..+++++.+
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 250 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVA 250 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHH
Confidence 344567799999999999865 458899999999999999999999999999899999988766544 368999999
Q ss_pred HHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
||.+||..||.+||+ +.++++||||+..
T Consensus 251 li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 251 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 999999999999994 6999999999863
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=392.56 Aligned_cols=264 Identities=40% Similarity=0.762 Sum_probs=237.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|.+.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDI 81 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeE
Confidence 356789999999999999999999999999999999876533 2456789999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999999988544 56899999999999999999999999999999999999954346789999999999887
Q ss_pred CCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
..........||+.|+|||++.+.++.++||||||+++|+|++|+.||......+....+......++...+..+++.+.
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred cCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 76666667789999999999988889999999999999999999999999988888888888776666555667899999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||.+||..||.+|||+.++|+||||++..
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 999999999999999999999999998754
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=409.14 Aligned_cols=256 Identities=34% Similarity=0.592 Sum_probs=220.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+. ||||+++++++.+.+.+++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEE
Confidence 358999999999999999999999999999999987543222233457889999999994 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 87 v~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp EECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCEEECCSSCTBTTTT
T ss_pred EEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCEEEEEeccceeccC
Confidence 99999 78999988654 5799999999999999999999999999999999999998 578999999999988776
Q ss_pred CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
+......+||+.|+|||++.+.. ++++|||||||++|+|++|+.||.+.........+...... ....+++++.
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~----~p~~~s~~~~ 236 (336)
T 3h4j_B 161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV----MPDFLSPGAQ 236 (336)
T ss_dssp SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCC----CCTTSCHHHH
T ss_pred CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC----CcccCCHHHH
Confidence 66667789999999999987653 67899999999999999999999876655443333222211 2245889999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+||.+||..||.+|||+.++++||||+..
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999999999999999999999999864
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=406.58 Aligned_cols=256 Identities=24% Similarity=0.485 Sum_probs=223.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEE
Confidence 5799999999999999999999999999999998765433334567889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+.||+|..++. ....+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|......
T Consensus 94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCCEEEeccceeeeccCC
Confidence 99999999999884 446799999999999999999999999999999999999998 5789999999999887766
Q ss_pred CCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCC---hhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
......+||+.|+|||++.. .++.++|||||||++|+|++|+.||.... .......+......++ ..++
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s 244 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWS 244 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCC
Confidence 66778899999999999853 35889999999999999999999997543 3344445554443332 4588
Q ss_pred HHHHHHHHHcCccCccCCCC-HHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps-~~~~l~hp~f~~~ 361 (562)
+.+.+||.+||..||.+||+ +.++++||||+..
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 99999999999999999998 8999999999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-49 Score=408.58 Aligned_cols=264 Identities=30% Similarity=0.572 Sum_probs=217.9
Q ss_pred cccceeec-ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----
Q 008547 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (562)
Q Consensus 94 ~~~~y~i~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~---- 168 (562)
+..+|.+. +.||.|+||+||+|.+..+|+.||||++... ..+.+|+.++.++.+||||+++++++..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 34567776 7899999999999999999999999998532 3467899988766679999999998875
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+||||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 67799999999999999998655455799999999999999999999999999999999999998644478999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh----hHHHHHHhCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~ 323 (562)
++...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... .....+..+...++...
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~ 290 (400)
T 1nxk_A 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290 (400)
T ss_dssp CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT
T ss_pred ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcc
Confidence 987765555567789999999999865 5688999999999999999999999776533 35666777777777777
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
|..+++++.+||.+||..||.+|||+.++++||||.......
T Consensus 291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~~ 332 (400)
T 1nxk_A 291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332 (400)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTSC
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCCC
Confidence 888999999999999999999999999999999998765433
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=404.30 Aligned_cols=260 Identities=35% Similarity=0.622 Sum_probs=226.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|.+.+.||+|+||.||+|.++.+|+.||||++.+... ...+|+.++.++.+||||+++++++.+++.+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 55689999999999999999999999999999999976542 23468889988867999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccCcccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFI 252 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~a~~~ 252 (562)
+||||++||+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+ ..+.+||+|||++...
T Consensus 93 lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 99999999999998843 46799999999999999999999999999999999999986421 2346999999999876
Q ss_pred CCC-CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCC---CChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 253 KPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 253 ~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+ ....++...+..+...+....|+.+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 443 334567899999999998764 68899999999999999999999976 3456677788888777777778889
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++++.+||.+||..||.+|||+.++++||||....
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~ 285 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence 99999999999999999999999999999997643
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=391.33 Aligned_cols=259 Identities=27% Similarity=0.478 Sum_probs=223.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++.+.||+|+||.||+|.+..+|+.||||++...... ..+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~ 93 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDELW 93 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEE
Confidence 346899999999999999999999999999999998655432 346788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCceecC
Confidence 99999999999998843 3589999999999999999999999999999999999998 47899999999998765
Q ss_pred CCC-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+....... ....+.+++.+
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 246 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIF 246 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHH
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHH
Confidence 433 34456899999999998654 5889999999999999999999998887766666655443221 12234688999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||.+||..||.+|||+.++|+||||+....
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 99999999999999999999999999997543
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-49 Score=402.67 Aligned_cols=254 Identities=28% Similarity=0.495 Sum_probs=226.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999999765433334567788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCCEEEcccccceeccCC
Confidence 9999999999988543 5699999999999999999999999999999999999998 5789999999999876432
Q ss_pred CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+..+...++ ..+++++.+|
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 268 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDL 268 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHH
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 345689999999999865 458899999999999999999999999998889988888765543 3589999999
Q ss_pred HHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
|.+||+.||.+||+ +.++++||||+..
T Consensus 269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 99999999999998 9999999999863
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=398.88 Aligned_cols=267 Identities=31% Similarity=0.605 Sum_probs=208.9
Q ss_pred ccceeec---ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~---~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+|.+. +.||+|+||.||+|.+..+|+.||||++.+. ....+.+|+.+++.+.+||||+++++++.+...
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~ 80 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH 80 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence 3467774 7899999999999999999999999998653 346678999999999779999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++..+....+||+|||++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 81 TFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp EEEEECCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEEEEEccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 9999999999999998854 46799999999999999999999999999999999999998544445899999999986
Q ss_pred cCCC-CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-------hhHHHHHHhCCCCCCCC
Q 008547 252 IKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 252 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~ 322 (562)
.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... .+....+..+...+...
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE 238 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc
Confidence 5443 23456688999999999865 458899999999999999999999976432 45666676666666655
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~ 369 (562)
.|+.+++++.+||.+||..||.+|||+.++++||||+........+.
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~ 285 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCC
Confidence 56679999999999999999999999999999999998765544443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=415.86 Aligned_cols=262 Identities=26% Similarity=0.456 Sum_probs=224.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+++.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||++++++|.+.+.+|+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEE
Confidence 35799999999999999999999999999999999754322222334478999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||++||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+||||+ .++++||+|||+|+....
T Consensus 152 V~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCT
T ss_pred EEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCCCEEEcchhhhhhccc
Confidence 99999999999988542 46799999999999999999999999999999999999998 578999999999976644
Q ss_pred CCC--cccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-CCCC
Q 008547 255 GKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWP 325 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~ 325 (562)
... ....+||+.|+|||++. +.++.++|||||||++|||++|+.||.+.+..+.+..+......+.. ..++
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 332 23468999999999985 34688999999999999999999999999988888888754322222 2235
Q ss_pred CCCHHHHHHHHHcCccCccC--CCCHHHHhcCcccccc
Q 008547 326 SISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 361 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~--Rps~~~~l~hp~f~~~ 361 (562)
.+++++++||++||+.+|++ ||++.++++||||+..
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 68999999999999999988 9999999999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=396.13 Aligned_cols=270 Identities=36% Similarity=0.589 Sum_probs=219.7
Q ss_pred ccccccceeec-ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 91 DKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 91 ~~~~~~~y~i~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
...+..+|.+. +.||+|+||.||+|.+..+|+.||||++..... .....+.+|+.++.++.+||||+++++++.+.
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~ 83 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE 83 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 34566789995 789999999999999999999999999875532 24567889999999976799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
+.+|+||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||++
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred CEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999999988554 57899999999999999999999999999999999999985433455999999998
Q ss_pred cccCCCC--------CcccccCCCcccCchhccc------CCCCCcchHHHHHHHHHHHhCCCCCCCCCh----------
Q 008547 250 DFIKPGK--------KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE---------- 305 (562)
Q Consensus 250 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~---------- 305 (562)
....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 7653221 1234569999999999863 458899999999999999999999977542
Q ss_pred -----hhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 306 -----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 306 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
......+......++...++.+++++.+||.+||..||.+|||+.++|+||||+......
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~ 306 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC------
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCcc
Confidence 335566666665555444567899999999999999999999999999999999765433
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=391.98 Aligned_cols=264 Identities=27% Similarity=0.476 Sum_probs=217.2
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+.+.++|++.+.||+|+||.||+|.+. +|+.||+|++..... .......+.+|+.+++.+ +||||+++++++.+++
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 92 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSER 92 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSS
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCC
Confidence 3456678999999999999999999985 589999999865432 223456788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~ 167 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLAR 167 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred EEEEEEcCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCce
Confidence 99999999975 88877754 335699999999999999999999999999999999999998 47899999999998
Q ss_pred ccCCC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC----
Q 008547 251 FIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP---- 323 (562)
Q Consensus 251 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 323 (562)
..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+...........
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp ETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred ecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence 76432 33445689999999999865 468899999999999999999999988877777666544211111111
Q ss_pred ----------------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 324 ----------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 324 ----------------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 234778999999999999999999999999999999764
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-49 Score=402.55 Aligned_cols=257 Identities=26% Similarity=0.463 Sum_probs=217.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHH-HHccCCCCcceEEEEEEcCCeEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL-QALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l-~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..+|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|..++ +.+ +||||+++++++.+.+.+|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEE
Confidence 35799999999999999999999999999999999876554444556677888774 556 6999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI- 252 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~- 252 (562)
+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCBCGGGB
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEeeCccccccc
Confidence 999999999999988543 5789999999999999999999999999999999999998 5789999999999863
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.........+||+.|+|||++.+. ++.++|||||||++|||++|..||.+.+..+++..+......++ +.+++++
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~ 266 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSA 266 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHH
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHH
Confidence 333445677999999999998764 68899999999999999999999999999899999888765443 4689999
Q ss_pred HHHHHHcCccCccCCCCH----HHHhcCcccccc
Q 008547 332 KDFVKKLLVKDPRARLTA----AQALSHPWVREG 361 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~----~~~l~hp~f~~~ 361 (562)
.+||.+||+.||.+||++ .++++||||+..
T Consensus 267 ~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 999999999999999987 699999999864
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=391.87 Aligned_cols=266 Identities=25% Similarity=0.357 Sum_probs=218.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHcc--CCCCcceEEEEEEc
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALA--GHENVVKFYNAFED 168 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~~ 168 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++...... .......+.+|+.+++.+. +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3457899999999999999999999999999999998643311 1112345667888877764 49999999999986
Q ss_pred CC-----eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 169 DN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 169 ~~-----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
.. .+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC---TTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEE
Confidence 55 5899999996 5999988665555699999999999999999999999999999999999998 4789999
Q ss_pred eeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC
Q 008547 244 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 322 (562)
+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+..........
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 99999987766666667789999999998854 56899999999999999999999999988888777765532222211
Q ss_pred C-----------------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 323 P-----------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 323 ~-----------------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
. .+.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 1 245789999999999999999999999999999999754
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=405.55 Aligned_cols=264 Identities=33% Similarity=0.660 Sum_probs=232.8
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
..+..+|.+.+.||+|+||.||+|.+..+|+.||||++...... .....+.+.+|+.+++.+.+||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34557899999999999999999999999999999998654321 1123567889999999996699999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
...+..|+||||++|++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~---~~~~ikl~Df 244 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQIRLSDF 244 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEEec
Confidence 9999999999999999999988543 5699999999999999999999999999999999999998 5789999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhccc-------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|++..+.........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+..+...+
T Consensus 245 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 324 (365)
T 2y7j_A 245 GFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF 324 (365)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred CcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 99988776666677899999999998853 35789999999999999999999999988888888888777666
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
..+.|..+++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus 325 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 325 SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 65556788999999999999999999999999999999973
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=394.10 Aligned_cols=258 Identities=25% Similarity=0.355 Sum_probs=213.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+.++|++.+.||+|+||+||+|.+..+|+.||||++..... ..........|+..+..+.+||||+++++++.+++.
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~ 131 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence 3355789999999999999999999999999999998865433 233445566777777777579999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||+ +++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTTCEE
T ss_pred EEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEccceeeee
Confidence 99999999 67998887654 35799999999999999999999999999999999999998 478899999999987
Q ss_pred cCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
...........||+.|+|||++.+.++.++|||||||++|+|++|..|+.+... ...+.... .+...++.+++++
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~l 281 (311)
T 3p1a_A 207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGY--LPPEFTAGLSSEL 281 (311)
T ss_dssp CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTC--CCHHHHTTSCHHH
T ss_pred cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccC--CCcccccCCCHHH
Confidence 765555556789999999999998889999999999999999999877755322 23333222 1112234688999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.+||.+||..||++|||+.++|+||||++
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 282 RSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 99999999999999999999999999985
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=409.46 Aligned_cols=260 Identities=27% Similarity=0.472 Sum_probs=222.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||+||+|.++.+|+.||||++.+.........+.+.+|+.++..+ +||||+++++++.+.+.+|+|
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEE
Confidence 5799999999999999999999999999999999764332223345678999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|+.....
T Consensus 140 mE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCTT
T ss_pred EcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCCEEEeechhheeccCC
Confidence 9999999999988543 34799999999999999999999999999999999999998 5789999999999876544
Q ss_pred CC--cccccCCCcccCchhcc--------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC-CC
Q 008547 256 KK--FQDIVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-PW 324 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~ 324 (562)
.. ....+||+.|+|||++. ..++.++|||||||++|||++|+.||.+.+..+.+..+......+..+ ..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 295 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVD 295 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC---
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccc
Confidence 33 23568999999999986 246889999999999999999999999998888888877533211111 12
Q ss_pred CCCCHHHHHHHHHcCccCccCC---CCHHHHhcCcccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVREG 361 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~R---ps~~~~l~hp~f~~~ 361 (562)
..+|+++++||.+||+ +|.+| |++.++++||||+..
T Consensus 296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 4689999999999999 99998 599999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=386.20 Aligned_cols=260 Identities=24% Similarity=0.428 Sum_probs=215.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||+||+|.+..+|+.||||++..... .......+.+|+.+++.+. ||||+++++++.+++.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence 479999999999999999999999999999999976543 3345577889999999994 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++ +|...+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCSC
T ss_pred EecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecCCc
Confidence 999975 66666643 346799999999999999999999999999999999999998 4789999999999876433
Q ss_pred -CCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCC-CCCChhhHHHHHHhCCCCCCC----------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRR---------- 321 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~---------- 321 (562)
......+||+.|+|||++.+. ++.++|||||||++|+|++|..|| .+.........+.........
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 334456899999999998653 588999999999999999887775 455555555555432111111
Q ss_pred ---------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 322 ---------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 322 ---------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...+.+++++.+||.+||+.||++|||+.++|+||||++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 11235789999999999999999999999999999999754
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-49 Score=413.72 Aligned_cols=258 Identities=34% Similarity=0.602 Sum_probs=229.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 35799999999999999999999999999999999765432223456789999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||++||+|.+++ ...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 94 v~E~~~gg~L~~~l--~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 94 VMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EEECCSSEEHHHHT--TSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTCCEEECCCSSCEECCT
T ss_pred EEeCCCCCcHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCCCeEEEeccchhhccc
Confidence 99999999999988 3456799999999999999999999999999999999999998 478999999999988766
Q ss_pred CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+.........+..+....+ ..+++++.
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 244 (476)
T 2y94_A 169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVI 244 (476)
T ss_dssp TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHH
T ss_pred cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHH
Confidence 66666789999999999987653 6789999999999999999999998888888888877654332 35789999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||.+||..||.+|||+.++++||||+...
T Consensus 245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 245 SLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred HHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 999999999999999999999999998754
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=401.03 Aligned_cols=262 Identities=34% Similarity=0.622 Sum_probs=226.3
Q ss_pred cccceee--cceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 94 ~~~~y~i--~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+...|.+ .+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++.| +||||+++++++...+.
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~ 160 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQL-DHANLIQLYDAFESKND 160 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence 3445655 668999999999999999999999999987643 23567889999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+++++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||+... .++.+||+|||++..
T Consensus 161 ~~lv~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 161 IVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARR 238 (373)
T ss_dssp EEEEEECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET-TTTEEEECCCSSCEE
T ss_pred EEEEEeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC-CCCcEEEEeCCCcee
Confidence 99999999999999888543 3468999999999999999999999999999999999999531 467899999999988
Q ss_pred cCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
..........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......+....++.++++
T Consensus 239 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 318 (373)
T 2x4f_A 239 YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEE 318 (373)
T ss_dssp CCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHH
T ss_pred cCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHH
Confidence 7766666667899999999988654 578999999999999999999999999988888888887766666667789999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+.+||.+||..||.+|||+.++|+||||+..
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 9999999999999999999999999999864
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=387.80 Aligned_cols=265 Identities=41% Similarity=0.726 Sum_probs=235.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++++ +||||+++++++...+.++
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEE
Confidence 445899999999999999999999999999999998654332 23467789999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++..+.+..+||+|||++....
T Consensus 98 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 999999999999988544 469999999999999999999999999999999999999865456689999999998776
Q ss_pred CCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.........||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+..+...+..+.+..+++++.+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence 55555566789999999999888899999999999999999999999998888888888887766666666789999999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
||.+||..||.+|||+.++|+||||++..
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred HHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 99999999999999999999999998754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=393.27 Aligned_cols=266 Identities=36% Similarity=0.621 Sum_probs=231.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++........ ...+.+.+|+.+++.+. ||||+++++++.+.
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYENR 87 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEecC
Confidence 355689999999999999999999999999999999876543221 23677899999999995 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~ 248 (562)
+.+++||||+++++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++..+ ....+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred CEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 99999999999999999884 346789999999999999999999999999999999999998421 112799999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...++.+
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (321)
T 2a2a_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245 (321)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhccc
Confidence 988766655667789999999999875 4588999999999999999999999998888888888776655544444678
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 246 ~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 9999999999999999999999999999999864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=397.11 Aligned_cols=261 Identities=28% Similarity=0.450 Sum_probs=224.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
......+|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++...+
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 127 (348)
T 1u5q_A 49 KDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREH 127 (348)
T ss_dssp CSCHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred ccchhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECC
Confidence 344556799999999999999999999999999999999765544455567899999999999 4999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..++||||+. |+|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSAS 202 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCB
T ss_pred eEEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCce
Confidence 9999999997 5888777533 36799999999999999999999999999999999999998 57899999999998
Q ss_pred ccCCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..... ...+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+.........+........ ....
T Consensus 203 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 277 (348)
T 1u5q_A 203 IMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGH 277 (348)
T ss_dssp SSSSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTT
T ss_pred ecCCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCC
Confidence 65432 3468999999999874 3468899999999999999999999988887777777666543221 2246
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 278 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 789999999999999999999999999999998654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=420.83 Aligned_cols=259 Identities=26% Similarity=0.461 Sum_probs=225.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+|+.+ +||||+++++++.+.+.+|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEE
Confidence 35799999999999999999999999999999999765433333556788999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||+|.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCCCeEEEecccceeccc
Confidence 99999999999988655555699999999999999999999999999999999999998 578999999999988766
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh----hhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ..+...+......++ ..+++
T Consensus 339 ~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s~ 414 (576)
T 2acx_A 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFSP 414 (576)
T ss_dssp TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCCH
Confidence 666667799999999999876 468999999999999999999999987542 344555555443332 46899
Q ss_pred HHHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 330 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
++.+||.+||+.||.+|| ++.++++||||+..
T Consensus 415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 999999999999999999 89999999999863
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=399.82 Aligned_cols=265 Identities=23% Similarity=0.350 Sum_probs=222.2
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc----CCCCcceEE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----GHENVVKFY 163 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~l~ 163 (562)
+.....+.++|.+.+.||+|+||.||+|.+..+|+.||||++... ......+..|+.+++.+. +||||++++
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 444456778999999999999999999999999999999998643 235567788999999995 499999999
Q ss_pred EEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--------
Q 008547 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-------- 235 (562)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~-------- 235 (562)
+++...+.+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence 9999999999999999 8999999977666679999999999999999999999999999999999999731
Q ss_pred --------------CCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCC
Q 008547 236 --------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPF 300 (562)
Q Consensus 236 --------------~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf 300 (562)
..++.+||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 1367899999999986443 2345689999999998865 5689999999999999999999999
Q ss_pred CCCChhhHHHHHHhCCCCCCC---------------------CCCC---------------------CCCHHHHHHHHHc
Q 008547 301 WDKTEDGIFKEVLRNKPDFRR---------------------KPWP---------------------SISNSAKDFVKKL 338 (562)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~---------------------~~~~---------------------~~~~~~~~ll~~~ 338 (562)
.+....+....+......++. ..|+ ..++.+.+||.+|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 339 (360)
T 3llt_A 260 RTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSI 339 (360)
T ss_dssp CCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHH
Confidence 888777666655443222110 0011 1236788999999
Q ss_pred CccCccCCCCHHHHhcCcccc
Q 008547 339 LVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 339 l~~dP~~Rps~~~~l~hp~f~ 359 (562)
|+.||.+|||+.++|+||||+
T Consensus 340 L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 340 LQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp CCSSGGGSCCHHHHTTSGGGC
T ss_pred hcCChhhCCCHHHHhcCcccC
Confidence 999999999999999999996
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=390.99 Aligned_cols=261 Identities=26% Similarity=0.437 Sum_probs=206.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++++.||+|+||.||+|.+..+|+.||+|++..... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEE
Confidence 479999999999999999999999999999999875432 22346688999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 176 MELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
|||++ |+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEECcCcccee
Confidence 99997 59988885443 24589999999999999999999999999999999999998 478999999999987
Q ss_pred cCCC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC------
Q 008547 252 IKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK------ 322 (562)
Q Consensus 252 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------ 322 (562)
.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+..........
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 6432 33445689999999999865 46889999999999999999999999888877776664421110000
Q ss_pred ------------------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 323 ------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 323 ------------------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
....+++++.+||.+||..||.+|||+.++|+||||++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 11247889999999999999999999999999999998654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=388.34 Aligned_cols=255 Identities=29% Similarity=0.569 Sum_probs=215.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-----------------------hhhHHHHHHHHHHHHH
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----------------------PIAVEDVKREVKILQA 152 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~ 152 (562)
++|.+.+.||+|+||.||+|.+..+|+.||||++....... ....+.+.+|+.+++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999987553211 1123568899999999
Q ss_pred ccCCCCcceEEEEEEc--CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 008547 153 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 230 (562)
Q Consensus 153 l~~hp~iv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NI 230 (562)
+ +||||+++++++.+ .+.+|+||||+++++|.+.+ ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 93 l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 L-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168 (298)
T ss_dssp C-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred C-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9 59999999999986 67899999999999987753 345799999999999999999999999999999999999
Q ss_pred EeccCCCCCCeEEeeccCccccCCCC-CcccccCCCcccCchhcccCC----CCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 231 LFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 231 ll~~~~~~~~vkl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
|++ .++.+||+|||++....... .....+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+...
T Consensus 169 l~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 169 LVG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EEC---TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEC---CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 998 47899999999998765432 234568999999999987643 6678999999999999999999988887
Q ss_pred hhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 306 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
......+......++ ..+.+++++.+||.+||..||++|||+.++++||||+
T Consensus 246 ~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 246 MCLHSKIKSQALEFP--DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHCCCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHhcccCCCC--CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 777777766554433 2357899999999999999999999999999999996
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-48 Score=384.47 Aligned_cols=265 Identities=32% Similarity=0.621 Sum_probs=234.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC------chhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI------LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++...... .....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 4557899999999999999999999999999999998654311 1234567889999999997799999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~df 168 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDF 168 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCcEEEecc
Confidence 9999999999999999999988543 5799999999999999999999999999999999999998 5788999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcc-------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
|++.............||+.|+|||++. ..++.++||||||+++|+|++|+.||...........+......+
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 248 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 248 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCccc
Confidence 9998876666666778999999999874 235788999999999999999999999988888888888877776
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+.++.+++.+.+||.+||..||.+|||+.++++||||++..
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 6666678999999999999999999999999999999998754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=403.95 Aligned_cols=262 Identities=33% Similarity=0.497 Sum_probs=209.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-- 170 (562)
.+.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+.+||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 34568999999999999999999999999999999986542 234456778899999999977999999999997544
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+||||++ ++|...+.. ..+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+|+
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN---AECHVKVADFGLSR 157 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred EEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc---CCCCEEecCCcccc
Confidence 7999999997 588887743 4689999999999999999999999999999999999998 57899999999997
Q ss_pred ccCC----------------------CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh
Q 008547 251 FIKP----------------------GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED 306 (562)
Q Consensus 251 ~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 306 (562)
.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6532 112345689999999999865 4688999999999999999999999998877
Q ss_pred hHHHHHHhCCCCCC--------------------------C-----------------CCCCCCCHHHHHHHHHcCccCc
Q 008547 307 GIFKEVLRNKPDFR--------------------------R-----------------KPWPSISNSAKDFVKKLLVKDP 343 (562)
Q Consensus 307 ~~~~~~~~~~~~~~--------------------------~-----------------~~~~~~~~~~~~ll~~~l~~dP 343 (562)
..+..+........ . .++..+++++.+||.+||..||
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 77666643211000 0 0123678999999999999999
Q ss_pred cCCCCHHHHhcCccccccC
Q 008547 344 RARLTAAQALSHPWVREGG 362 (562)
Q Consensus 344 ~~Rps~~~~l~hp~f~~~~ 362 (562)
.+|||+.++|+||||+...
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFH 336 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTC
T ss_pred ccCCCHHHHhCCHHHHHhc
Confidence 9999999999999998643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-49 Score=408.98 Aligned_cols=266 Identities=36% Similarity=0.630 Sum_probs=215.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-----hhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
..+.++|.+.+.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.+|+++ +||||+++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 209 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF 209 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 345678999999999999999999999999999999987653221 12233578999999999 599999999998
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
.. +..|+||||+++|+|.+.+ .....+++..++.++.||+.||.|||++||+||||||+|||++..+.+..+||+||
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGT--SSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred ec-CceEEEEEcCCCCcHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 65 4589999999999998877 34567999999999999999999999999999999999999986555667999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRR 321 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 321 (562)
|+|+...........+||+.|+|||++. ..++.++|||||||++|+|++|+.||...... .....+......+..
T Consensus 287 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366 (419)
T ss_dssp STTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH
T ss_pred ccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc
Confidence 9998876655566778999999999975 34567899999999999999999999775443 445555555555544
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
..|+.+++.+.+||.+||..||.+|||+.++|+||||++.
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 4566789999999999999999999999999999999863
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=391.42 Aligned_cols=259 Identities=33% Similarity=0.592 Sum_probs=217.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+ +||||+++++++.+++..|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEE
Confidence 45689999999999999999999999999999999865432 12346688999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++ .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 82 lv~e~~~~~~L~~~l--~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 82 LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECE
T ss_pred EEEEcCCCCcHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCEEEEEeeccceec
Confidence 999999999999887 4446799999999999999999999999999999999999998 57899999999997653
Q ss_pred CC---CCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhH-HHHHHhCCCCCCCCCCCCC
Q 008547 254 PG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 327 (562)
.. ......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||........ +....... .....+..+
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~ 234 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKI 234 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC--TTSTTGGGS
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc--ccCCccccC
Confidence 22 2234568999999999986543 6689999999999999999999987655433 33333322 223345678
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 99999999999999999999999999999998754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=410.94 Aligned_cols=257 Identities=29% Similarity=0.512 Sum_probs=216.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEE
Confidence 357999999999999999999999999999999997654333445567889999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||+++|+|..++... ..+++..++.++.||+.||.|||+ .||+||||||+||||+ .++.+||+|||+|+...
T Consensus 226 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCCCTTC
T ss_pred EEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCceecc
Confidence 99999999999888543 579999999999999999999998 9999999999999998 47899999999998643
Q ss_pred -CCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 -PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 -~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..+++++
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~ 376 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEA 376 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHH
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHH
Confidence 3334556789999999999865 468999999999999999999999999998888888887765543 3588999
Q ss_pred HHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 332 KDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
.+||.+||..||.+|| ++.++++||||+..
T Consensus 377 ~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 9999999999999999 99999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=411.07 Aligned_cols=261 Identities=29% Similarity=0.438 Sum_probs=198.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----- 168 (562)
+.++|.+++.||+|+||.||+|.++.+|+.||||++.... ......+.+.+|+.+|+.| +||||+++++++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTT
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCccc
Confidence 4568999999999999999999999999999999986543 2344567889999999999 59999999999843
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+|+||||+ +++|...+. ....+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~---~~~~~kl~DFGl 202 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCDFGL 202 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred CceEEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC---CCCCEeeccccc
Confidence 36799999998 568888873 446799999999999999999999999999999999999998 578999999999
Q ss_pred ccccCCCC----------------------------CcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHh---
Q 008547 249 SDFIKPGK----------------------------KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLC--- 295 (562)
Q Consensus 249 a~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~--- 295 (562)
|+...... .....+||++|+|||++. ..++.++|||||||+||||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 98754221 234568899999999763 347899999999999999998
Q ss_pred --------CCCCCCCCCh--------------------hhHHHHHH-----------------------hCCCCC----C
Q 008547 296 --------GRRPFWDKTE--------------------DGIFKEVL-----------------------RNKPDF----R 320 (562)
Q Consensus 296 --------g~~pf~~~~~--------------------~~~~~~~~-----------------------~~~~~~----~ 320 (562)
|+++|.+... ...+..+. ...+.. .
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 7777765431 11111111 111100 0
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...++.+++++.+||.+||.+||.+|||+.++|+||||+...
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 112466799999999999999999999999999999999754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-48 Score=398.96 Aligned_cols=263 Identities=22% Similarity=0.307 Sum_probs=218.1
Q ss_pred cceeecceeecc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
++|++++.||+| +||.||+|.+..+|+.||||++..... .....+.+.+|+.+++.+. ||||+++++++.+.+.+|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEEE
Confidence 479999999999 999999999999999999999976543 3446678889999999994 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccccceeec
Confidence 999999999999998776667799999999999999999999999999999999999998 57899999999876432
Q ss_pred CC--------CCcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC---
Q 008547 254 PG--------KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF--- 319 (562)
Q Consensus 254 ~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 319 (562)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+..+....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 11 11233579999999999875 46889999999999999999999998876655554433221100
Q ss_pred ---------------------------------------CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 320 ---------------------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 320 ---------------------------------------~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
..+.+..+++++.+||.+||..||.+|||+.++|+||||+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 01123457889999999999999999999999999999997
Q ss_pred cCC
Q 008547 361 GGD 363 (562)
Q Consensus 361 ~~~ 363 (562)
...
T Consensus 340 ~~~ 342 (389)
T 3gni_B 340 IKR 342 (389)
T ss_dssp C--
T ss_pred Hhh
Confidence 643
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=384.21 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=211.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+ .+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEE
Confidence 4799999999999999999998 6789999999865432 122346788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLARAFGIP 153 (288)
T ss_dssp EECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHHHHHCC-
T ss_pred EEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEeECccccccCcc
Confidence 999975 88887743 336799999999999999999999999999999999999998 4789999999999765432
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-----------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----------- 321 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 321 (562)
......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+.........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 23345678999999999865 3688999999999999999999999988877766665432111000
Q ss_pred --------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 322 --------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 322 --------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
..++.+++++.+||.+||..||++|||+.++|+||||++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0123578999999999999999999999999999999863
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-48 Score=384.77 Aligned_cols=264 Identities=40% Similarity=0.731 Sum_probs=230.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHY 81 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEE
Confidence 355689999999999999999999999999999999875432 2345688999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||++...+.++.+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999999988544 56899999999999999999999999999999999999954346789999999999765
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+..+...+....++.+++++
T Consensus 160 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 238 (304)
T 2jam_A 160 QNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESA 238 (304)
T ss_dssp CCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHH
T ss_pred CCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHH
Confidence 432 23445799999999998654 5889999999999999999999999988888888888887777766677899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+||.+||..||.+|||+.++|+||||+....
T Consensus 239 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 239 KDFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 99999999999999999999999999987543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-48 Score=388.03 Aligned_cols=257 Identities=27% Similarity=0.511 Sum_probs=213.5
Q ss_pred ccceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.++|++.+.||+|+||.||+|.+. .+|+.||+|++.+.... .......+.+|+.+++.+. ||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence 357999999999999999999875 68999999998765321 1234456789999999995 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLCK 169 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC-
T ss_pred EEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCccc
Confidence 999999999999999988543 5689999999999999999999999999999999999998 47899999999997
Q ss_pred ccCC-CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 251 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 251 ~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ +.++
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~ 245 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLT 245 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCC
Confidence 6432 233456689999999999865 468899999999999999999999999888888888887765443 4688
Q ss_pred HHHHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+++.+||.+||..||.+|| ++.++++||||+..
T Consensus 246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 9999999999999999999 88999999999864
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=391.34 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=211.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.+ +||||+++++++.+.+.++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEE
Confidence 34589999999999999999999999999999999875532 223456678999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--CCCCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~--~~~~~vkl~DfG~a~~ 251 (562)
+||||++ |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.. ...+.+||+|||++..
T Consensus 110 lv~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999997 499988843 3569999999999999999999999999999999999999632 2456699999999976
Q ss_pred cCCC-CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC---
Q 008547 252 IKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP--- 325 (562)
Q Consensus 252 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 325 (562)
.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+...........|+
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5432 23345678999999999865 35899999999999999999999999888877777665432222211111
Q ss_pred -----------------------CCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 326 -----------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 326 -----------------------~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 167899999999999999999999999999999874
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=393.08 Aligned_cols=262 Identities=26% Similarity=0.418 Sum_probs=212.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+..+|+.||+|++..... ......+.+|+.+++.+. ||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence 479999999999999999999999999999999865432 111223457999999994 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC---
T ss_pred ecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCcccccccCC
Confidence 99997 5888877543 45699999999999999999999999999999999999998 4789999999999765432
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC---------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--------- 323 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 323 (562)
......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+...........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 23345688999999999865 458899999999999999999999999888777766655322222211
Q ss_pred -----------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 324 -----------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 324 -----------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
++.+++++.+||.+||..||.+|||+.++|+||||.......
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 235688999999999999999999999999999999876543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=396.29 Aligned_cols=269 Identities=35% Similarity=0.636 Sum_probs=226.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCC
Confidence 456789999999999999999999999999999999865421 1234567899999999999 4999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhh--------------------------------------cCCCCCHHHHHHHHHHHHHHH
Q 008547 171 YVYIAMELCEGGELLDRILAK--------------------------------------KDSRYTEKDAAVVVRQMLRVA 212 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qi~~~l 212 (562)
..++||||+++|+|.+++... ....+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999877310 011246778899999999999
Q ss_pred HHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-----CcccccCCCcccCchhccc---CCCCCcchH
Q 008547 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR---KSGPESDVW 284 (562)
Q Consensus 213 ~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~Diw 284 (562)
.|||++||+||||||+|||++.. ....+||+|||++....... ......||+.|+|||++.+ .++.++|||
T Consensus 182 ~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 182 HYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 99999999999999999999842 23489999999997653211 2345679999999999863 458899999
Q ss_pred HHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 285 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
||||++|+|++|+.||.+....+....+......+..+.+..+++++.+||.+||..||.+||++.++|+||||++...
T Consensus 261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 9999999999999999999998889898888777776666678999999999999999999999999999999998654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=408.20 Aligned_cols=258 Identities=27% Similarity=0.448 Sum_probs=223.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEE
Confidence 5799999999999999999999999999999999765433333457788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|||++||+|..++.... ...+++..++.++.||+.||.|||++||+||||||+||||+ .++++||+|||++....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCCEEEeecceeeecc
Confidence 99999999999886533 35699999999999999999999999999999999999998 57899999999998765
Q ss_pred CCCC-cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC----hhhHHHHHHhCCCCCCCCCCCCC
Q 008547 254 PGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.... ....+||+.|+|||++.+. ++.++|||||||++|||++|+.||.+.. ...+...+......++ +.+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~~ 416 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TTS
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----ccc
Confidence 5433 3456999999999998764 6899999999999999999999997753 3456666666554433 468
Q ss_pred CHHHHHHHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 328 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
++++.+||.+||..||.+||+ +.++++||||+..
T Consensus 417 s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 999999999999999999995 5899999999864
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-48 Score=379.06 Aligned_cols=257 Identities=29% Similarity=0.579 Sum_probs=221.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.+. ||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEEE
Confidence 57999999999999999999999999999999986544333334567889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCCEEEEeccccccCCcc
Confidence 9999999999988543 5699999999999999999999999999999999999998 5789999999998654432
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+......++ ..+++.+.+|
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 237 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 237 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHH
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHH
Confidence 23456899999999998764 48899999999999999999999998888888887777654433 3578999999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
|.+||..||.+|||+.++++||||+....
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred HHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 99999999999999999999999997654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=401.54 Aligned_cols=258 Identities=29% Similarity=0.441 Sum_probs=210.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
...+|.+.+.||+|+||.||+|.+..++. ||+|++...... ..+|+.+++.+ +||||+++++++...+
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 108 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIV-KHPNVVDLKAFFYSNGDKK 108 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTC-CCTTBCCEEEEEEEESSSS
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhC-CCCCcceEEEEEEecCCCC
Confidence 45689999999999999999999877765 888887544321 23699999999 5999999999985433
Q ss_pred ---eEEEEEeccCCCChHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 171 ---YVYIAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
.+++||||+++ ++...+. ......+++..++.++.||+.||.|||++||+||||||+|||++. .++.+||+|
T Consensus 109 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~~kL~D 185 (394)
T 4e7w_A 109 DEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP--PSGVLKLID 185 (394)
T ss_dssp SCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECC
T ss_pred CceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC--CCCcEEEee
Confidence 48899999976 4444332 233567999999999999999999999999999999999999983 478999999
Q ss_pred ccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC-------
Q 008547 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------- 316 (562)
Q Consensus 246 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~------- 316 (562)
||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 186 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 186 FGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp CTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred CCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999988766666667789999999998865 46899999999999999999999999988776666654311
Q ss_pred ----------CCCC---CC-----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 317 ----------PDFR---RK-----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 317 ----------~~~~---~~-----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..++ .. ..+.+++++.+||.+||..||.+|||+.++++||||++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0011 00 12347899999999999999999999999999999998654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=407.86 Aligned_cols=259 Identities=27% Similarity=0.438 Sum_probs=209.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+ +||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccc
Confidence 4568999999999999999999999999999999997543 2344567889999999999 599999999999654
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+|+||||+++ +|...+. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~---~~~~~kl~DFG 209 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 209 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCC
T ss_pred cCCeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe---CCCCEEEEEEE
Confidence 468999999976 5666552 3489999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--------- 317 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------- 317 (562)
+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9988766656667899999999998865 568899999999999999999999998887766666543211
Q ss_pred -------------CCCCCCC----CC------------CCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 -------------DFRRKPW----PS------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 -------------~~~~~~~----~~------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+....+ +. .++++.+||.+||.+||.+|||+.++|+||||+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 363 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence 1111100 00 146789999999999999999999999999998643
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-48 Score=424.07 Aligned_cols=257 Identities=25% Similarity=0.438 Sum_probs=229.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+++.||+|+||+||+|.++.+|+.||||++.+.........+.+..|..++..+.+||+|+.+++++.+.+.+|||
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999999999999999997653333335567889999999887899999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc-CC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~-~~ 254 (562)
|||++||+|..++... +.+++..++.++.||+.||.|||++|||||||||+||||+ .++++||+|||+|+.. ..
T Consensus 421 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSCEEECCCTTCEECCCT
T ss_pred EeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCcEEEeecceeeccccC
Confidence 9999999999988544 5799999999999999999999999999999999999998 5789999999999863 33
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||+||||++|+.||.+.+..+++..+......++ ..+++++.+
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 571 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVA 571 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC----TTSCHHHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHH
Confidence 445567899999999999865 568999999999999999999999999999999999988776554 368999999
Q ss_pred HHHHcCccCccCCCCH-----HHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTA-----AQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~-----~~~l~hp~f~~~ 361 (562)
||.+||..||.+||++ .++++||||+..
T Consensus 572 li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 572 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 9999999999999997 999999999864
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=379.42 Aligned_cols=265 Identities=36% Similarity=0.651 Sum_probs=224.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++....... ....+.+.+|+.+++.+. ||||+++++++...+.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCCe
Confidence 457999999999999999999999999999999987653321 124678899999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeeccCcc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSD 250 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG~a~ 250 (562)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++..+ ....+||+|||++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999988543 5799999999999999999999999999999999999998421 23389999999998
Q ss_pred ccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+......+....++.+++
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCH
Confidence 7765555556789999999999865 458899999999999999999999999888888877776655554444467899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+||.+||..||.+|||+.++++||||+...
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 999999999999999999999999999998753
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=382.90 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=214.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEE
Confidence 57999999999999999999999999999999986553 23445677889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|...+ .....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~--~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 81 FEYCDHTVLHELD--RYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp EECCSEEHHHHHH--HTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECC--
T ss_pred EEeCCCchHHHHH--hhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEEeeCCCchhccCc
Confidence 9999998887766 3346799999999999999999999999999999999999998 5789999999999876532
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC---------------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--------------- 317 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------------- 317 (562)
......+||+.|+|||++.+ .++.++||||||+++|+|++|+.||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 33345689999999999864 458899999999999999999999988877665554432110
Q ss_pred ----CCCCC--------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 318 ----DFRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 318 ----~~~~~--------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
..+.+ .++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 00000 12568899999999999999999999999999999998654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=389.06 Aligned_cols=265 Identities=36% Similarity=0.635 Sum_probs=218.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++...... .......+.+|+.+++.+ +||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEc
Confidence 4556899999999999999999999999999999998754321 112334578999999999 5999999999998
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+. .|+||||+++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred CCc-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 765 899999999999999873 44679999999999999999999999999999999999999864445679999999
Q ss_pred CccccCCCCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRK 322 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 322 (562)
++.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+...
T Consensus 163 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242 (322)
T ss_dssp TCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHH
T ss_pred cceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCch
Confidence 998765544444567999999999873 34578999999999999999999999765543 4445555554444333
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.++.+++.+.+||.+||..||.+||++.++|+||||+..
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 456789999999999999999999999999999999863
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-47 Score=383.36 Aligned_cols=265 Identities=32% Similarity=0.538 Sum_probs=231.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.....++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 114 (335)
T 2owb_A 36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDND 114 (335)
T ss_dssp ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence 344567899999999999999999999999999999999876555566778899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~ 189 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLAT 189 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred eEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCEEEeeccCce
Confidence 999999999999999887543 5799999999999999999999999999999999999998 47889999999998
Q ss_pred ccCC-CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 251 FIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 251 ~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.... ........||+.|+|||++.+. ++.++||||||+++|+|++|+.||......+....+......++ ..++
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~ 265 (335)
T 2owb_A 190 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHIN 265 (335)
T ss_dssp ECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSC
T ss_pred ecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCC
Confidence 7643 2334456899999999998664 58899999999999999999999988887777777776654332 3578
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~ 365 (562)
+.+.+||.+||..||.+|||+.++++||||+......
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~ 302 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence 9999999999999999999999999999999765433
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=374.53 Aligned_cols=261 Identities=32% Similarity=0.539 Sum_probs=229.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
...++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEE
Confidence 4456899999999999999999999999999999999776555566778899999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 91 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCEEEEeccCceec
Confidence 9999999999999877443 5799999999999999999999999999999999999998 4788999999999876
Q ss_pred CC-CCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.. ........||+.|+|||++.+. ++.++||||||+++|+|++|+.||......+....+......++ ..+++.
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 241 (294)
T 2rku_A 166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPV 241 (294)
T ss_dssp CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHH
T ss_pred ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHH
Confidence 43 2334456799999999998664 58899999999999999999999988888777777766544332 357899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+.+||.+||..||++|||+.++++||||+....
T Consensus 242 ~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 242 AASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 999999999999999999999999999987653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=392.21 Aligned_cols=257 Identities=26% Similarity=0.493 Sum_probs=213.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccC-CCCcceEEEEEEcCCeEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-hp~iv~l~~~~~~~~~~~ 173 (562)
..+|.+.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.+++.|.+ ||||+++++++...+.+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 3469999999999999999998764 89999999876543 34566789999999999963 699999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus 133 lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC-
T ss_pred EEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCcccccc
Confidence 9999 568899998854 35789999999999999999999999999999999999996 4789999999998765
Q ss_pred CCC---CcccccCCCcccCchhccc------------CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHHHhCCC
Q 008547 254 PGK---KFQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKP 317 (562)
Q Consensus 254 ~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~ 317 (562)
... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ...+..+.....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 285 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTS
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccc
Confidence 432 2345689999999999864 467889999999999999999999977543 344555554443
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+..+ ...++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 286 ~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 286 EIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp CCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred cCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 33322 23578999999999999999999999999999998643
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=379.31 Aligned_cols=255 Identities=31% Similarity=0.536 Sum_probs=220.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|...+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 121 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLM 121 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 47888899999999999999999999999999875432 2456788999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~- 255 (562)
||+++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 122 e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~ 195 (321)
T 2c30_A 122 EFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDV 195 (321)
T ss_dssp CCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSSS
T ss_pred ecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeecccCc
Confidence 9999999998773 35699999999999999999999999999999999999998 4789999999999876433
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+....... ......+++.+.+|
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l 274 (321)
T 2c30_A 196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNSHKVSPVLRDF 274 (321)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CTTGGGSCHHHHHH
T ss_pred cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cCccccCCHHHHHH
Confidence 233456899999999998654 5889999999999999999999999888777777766554321 12234578999999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
|.+||..||++|||+.++++||||....
T Consensus 275 i~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 275 LERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHHccCChhhCcCHHHHhcChhhccCC
Confidence 9999999999999999999999998654
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-47 Score=395.67 Aligned_cols=262 Identities=29% Similarity=0.486 Sum_probs=208.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+|+.+. ||||+++++++...
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTT
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCCc
Confidence 4568999999999999999999999999999999997542 23445678899999999995 99999999999766
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..+|+||||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~---~~~~~kL~DFGl 175 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGL 175 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred CCeEEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC---CCCCEEEccCCC
Confidence 67999999986 59998883 446799999999999999999999999999999999999998 578999999999
Q ss_pred ccccCCCC-----------------------CcccccCCCcccCchhcc--cCCCCCcchHHHHHHHHHHHhC-------
Q 008547 249 SDFIKPGK-----------------------KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG------- 296 (562)
Q Consensus 249 a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g------- 296 (562)
|+...... .....+||++|+|||++. ..++.++|||||||++|||++|
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 98764322 235678999999999863 3468999999999999999984
Q ss_pred ----CCCCCCCCh-----------------hhHHHH-----------------------HHhCCCCCCCC----CCCCCC
Q 008547 297 ----RRPFWDKTE-----------------DGIFKE-----------------------VLRNKPDFRRK----PWPSIS 328 (562)
Q Consensus 297 ----~~pf~~~~~-----------------~~~~~~-----------------------~~~~~~~~~~~----~~~~~~ 328 (562)
.++|.+.+. ...+.. .....+..... .++.++
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 444433321 111111 11111111111 135689
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+++.+||.+||..||.+|||+.++|+||||+....
T Consensus 336 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 99999999999999999999999999999997643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-47 Score=386.27 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=219.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------- 168 (562)
.+|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+++.+. ||||+++++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhcc-CCCcccHhheeecccccccc
Confidence 5899999999999999999999999999999998655432 223456789999999995 9999999999886
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+.+|+||||+++ +|...+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg 169 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFG 169 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCT
T ss_pred CCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCCEEEccch
Confidence 4578999999975 77777643 335699999999999999999999999999999999999998 47899999999
Q ss_pred CccccCC-----CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKP-----GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+|..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......+.
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9976542 222345688999999998865 358999999999999999999999999888877777665444444
Q ss_pred CCCCCCC----------------------------CHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 321 RKPWPSI----------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 321 ~~~~~~~----------------------------~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
...|+.+ ++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 320 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM 320 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence 4444332 678999999999999999999999999999987543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=374.60 Aligned_cols=258 Identities=34% Similarity=0.594 Sum_probs=216.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. ||||+++++++...+..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEEE
Confidence 358999999999999999999999999999999986543322334567899999999994 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGGCCCC
T ss_pred EEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeecccccccCC
Confidence 99999999999988544 5689999999999999999999999999999999999998 478899999999987765
Q ss_pred CCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
........||+.|+|||++.+.. +.++||||||+++|+|++|..||...........+......++ ..++..+.
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 239 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVA 239 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHH
Confidence 55555668999999999987653 5789999999999999999999988888777777776544332 35789999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++|.+||+.||.+|||+.++++||||++..
T Consensus 240 ~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 240 TLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 999999999999999999999999998754
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-47 Score=387.11 Aligned_cols=258 Identities=29% Similarity=0.482 Sum_probs=212.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+..+|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+. ||||+++++++...
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTT
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCccc
Confidence 4568999999999999999999999999999999986543 23445678899999999995 99999999999865
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+|+||||+ +++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg 173 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFG 173 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCT
T ss_pred cCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc---CCCCEEEEeee
Confidence 3469999999 7899887743 4699999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------- 316 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------- 316 (562)
+++.... .....++|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 174 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 174 LARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp TCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9987543 3445689999999998865 56899999999999999999999999887766665554311
Q ss_pred --------------CCCCC----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 --------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 --------------~~~~~----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+.... ..++.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 11111 12356789999999999999999999999999999998754
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=374.42 Aligned_cols=257 Identities=30% Similarity=0.582 Sum_probs=224.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998654322223456789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccccccCccc
Confidence 9999999999988544 5689999999999999999999999999999999999998 4788999999998765432
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
......||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+......++ +.+++.+.+|
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 242 (284)
T 2vgo_A 168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDL 242 (284)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHH
T ss_pred -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHH
Confidence 23456899999999998764 58899999999999999999999988888777777776554332 4688999999
Q ss_pred HHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
|.+||..||.+|||+.++++||||+....
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred HHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 99999999999999999999999997654
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=391.57 Aligned_cols=266 Identities=24% Similarity=0.371 Sum_probs=218.6
Q ss_pred ccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC-----cceEE
Q 008547 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-----VVKFY 163 (562)
Q Consensus 89 ~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~-----iv~l~ 163 (562)
...+.+..+|.+.+.||+|+||+||+|.+..+|+.||||++.... .....+.+|+.+++.+..|++ |+.++
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~ 122 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLK 122 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence 344567789999999999999999999999999999999986432 345677889999998865664 99999
Q ss_pred EEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--HcCceeccCCCCceEeccCCCCCCe
Q 008547 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH--~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+++...+.+|+||||+. |+|.+.+.......+++..++.++.||+.||.||| ..||+||||||+|||++. +.++.+
T Consensus 123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~ 200 (382)
T 2vx3_A 123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAI 200 (382)
T ss_dssp EEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCE
T ss_pred eeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcE
Confidence 99999999999999996 59999987666567999999999999999999999 579999999999999963 146789
Q ss_pred EEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 242 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.......+
T Consensus 201 kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 201 KIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278 (382)
T ss_dssp EECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999999987643 3345689999999999876 468999999999999999999999998887777666554211100
Q ss_pred ------------------CCCC--------------C---C-------------------------CCHHHHHHHHHcCc
Q 008547 321 ------------------RKPW--------------P---S-------------------------ISNSAKDFVKKLLV 340 (562)
Q Consensus 321 ------------------~~~~--------------~---~-------------------------~~~~~~~ll~~~l~ 340 (562)
...| + . .++++.+||.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 0000 0 0 01378999999999
Q ss_pred cCccCCCCHHHHhcCccccccC
Q 008547 341 KDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 341 ~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||++|||+.++|+||||+...
T Consensus 359 ~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 359 YDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp SCTTTSCCHHHHTTSGGGCC--
T ss_pred CChhhCCCHHHHhcCcccccCC
Confidence 9999999999999999998754
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=388.39 Aligned_cols=254 Identities=31% Similarity=0.564 Sum_probs=216.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++........ .....+.+|+.+++.+ +||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence 456789999999999999999999999999999999876543211 1334567899999999 5999999999999
Q ss_pred cCCeEEEEEeccCCC-ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 168 DDNYVYIAMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+.+.+++||||+.+| +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Df 174 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDF 174 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCC
T ss_pred eCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcEEEeec
Confidence 999999999999776 8888873 446799999999999999999999999999999999999998 4789999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
|++............+||+.|+|||++.+.. +.++|||||||++|+|++|+.||..... .... .....
T Consensus 175 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~----~~~~~ 244 (335)
T 3dls_A 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA----AIHPP 244 (335)
T ss_dssp TTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT----CCCCS
T ss_pred ccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh----ccCCC
Confidence 9998877666666778999999999987643 6789999999999999999999965322 1111 11122
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 245 ~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 245 YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 35889999999999999999999999999999998754
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-48 Score=387.35 Aligned_cols=265 Identities=27% Similarity=0.430 Sum_probs=221.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN- 170 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~- 170 (562)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCC
Confidence 44667899999999999999999999999999999999876555566677899999999999 5999999999987543
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg 161 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFG 161 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEECCCS
T ss_pred CCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEeecc
Confidence 459999999999999988543 5799999999999999999999999999999999999998 47889999999
Q ss_pred CccccCCCC----CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC
Q 008547 248 LSDFIKPGK----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 248 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 322 (562)
++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....................
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 241 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHH
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccc
Confidence 998654332 2234579999999999876 45889999999999999999999999988887777777765544433
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++.+++++.+||.+||..||.+||++.+++.|+|++...
T Consensus 242 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 4567899999999999999999999999999999998643
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=372.25 Aligned_cols=257 Identities=20% Similarity=0.331 Sum_probs=216.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----CCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----~~~ 171 (562)
+.|.+.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++.+ +||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCce
Confidence 468999999999999999999999999999999876543 344567889999999999 59999999998864 467
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.| |+||||||+|||++. .++.+||+|||++
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGG
T ss_pred EEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCc
Confidence 89999999999999988543 56899999999999999999999999 999999999999973 4678999999999
Q ss_pred cccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 250 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 250 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
...... ......||+.|+|||++.+.++.++|||||||++|+|++|+.||.................. +.......++
T Consensus 180 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 257 (290)
T 1t4h_A 180 TLKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIP 257 (290)
T ss_dssp GGCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCH
T ss_pred cccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC-ccccCCCCCH
Confidence 765432 33456799999999999888899999999999999999999999875554443333332211 1112234678
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
++.+||.+||..||.+|||+.++++||||++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 9999999999999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=397.09 Aligned_cols=262 Identities=28% Similarity=0.399 Sum_probs=217.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-----CCCCcceEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNAF 166 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~l~~~~ 166 (562)
+.+..+|++++.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+. +|+||+.+++++
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~ 168 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence 446678999999999999999999999999999999986542 34567888999998885 478999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC--eEEe
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS--LKAT 244 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~--vkl~ 244 (562)
...+.+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||||+. ++. +||+
T Consensus 169 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~---~~~~~vkL~ 244 (429)
T 3kvw_A 169 TFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ---QGRSGIKVI 244 (429)
T ss_dssp EETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESS---TTSCCEEEC
T ss_pred ccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcc---CCCcceEEe
Confidence 99999999999996 69999887766667999999999999999999999999999999999999984 444 9999
Q ss_pred eccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC---
Q 008547 245 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR--- 320 (562)
Q Consensus 245 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 320 (562)
|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+........
T Consensus 245 DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 245 DFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp CCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 9999976543 3345689999999998865 468999999999999999999999998887776665543110000
Q ss_pred -----------------C--------------------------C----C-----CCCCCHHHHHHHHHcCccCccCCCC
Q 008547 321 -----------------R--------------------------K----P-----WPSISNSAKDFVKKLLVKDPRARLT 348 (562)
Q Consensus 321 -----------------~--------------------------~----~-----~~~~~~~~~~ll~~~l~~dP~~Rps 348 (562)
. + . ....++.+.+||.+||.+||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 0 0 0 0123688999999999999999999
Q ss_pred HHHHhcCccccccCC
Q 008547 349 AAQALSHPWVREGGD 363 (562)
Q Consensus 349 ~~~~l~hp~f~~~~~ 363 (562)
+.++|+||||+....
T Consensus 403 a~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 403 PGQALRHPWLRRRLP 417 (429)
T ss_dssp HHHHHTSTTTC----
T ss_pred HHHHhCChhhccCCC
Confidence 999999999997643
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-47 Score=390.46 Aligned_cols=257 Identities=27% Similarity=0.485 Sum_probs=213.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----- 168 (562)
...+|.+++.||+|+||.||+|.+..+|+.||||++...... ..+|+.+++.+ +||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVL-DHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTC-CCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHc-CCCCccchhheeeecCccc
Confidence 346899999999999999999999999999999998654321 23799999999 59999999999843
Q ss_pred ---------------------------------CCeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHH
Q 008547 169 ---------------------------------DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAA 213 (562)
Q Consensus 169 ---------------------------------~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~ 213 (562)
...+++||||++ |+|.+.+.. .....+++..++.++.||+.||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999997 587776643 34567999999999999999999
Q ss_pred HHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHH
Q 008547 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITY 291 (562)
Q Consensus 214 ~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~ 291 (562)
|||++||+||||||+|||++. .++.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 999999999999999999974 467899999999988766666667789999999998765 3689999999999999
Q ss_pred HHHhCCCCCCCCChhhHHHHHHhCC------------CCC-----C---CC-----CCCCCCHHHHHHHHHcCccCccCC
Q 008547 292 ILLCGRRPFWDKTEDGIFKEVLRNK------------PDF-----R---RK-----PWPSISNSAKDFVKKLLVKDPRAR 346 (562)
Q Consensus 292 el~~g~~pf~~~~~~~~~~~~~~~~------------~~~-----~---~~-----~~~~~~~~~~~ll~~~l~~dP~~R 346 (562)
+|++|+.||.+....+.+..+.... +.+ + .. ....+++++.+||.+||..||.+|
T Consensus 234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999999999888777766664311 001 0 00 113478899999999999999999
Q ss_pred CCHHHHhcCcccccc
Q 008547 347 LTAAQALSHPWVREG 361 (562)
Q Consensus 347 ps~~~~l~hp~f~~~ 361 (562)
||+.++|+||||++.
T Consensus 314 ~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 314 INPYEAMAHPFFDHL 328 (383)
T ss_dssp CCHHHHHTSGGGHHH
T ss_pred CCHHHHhcCHHHHHH
Confidence 999999999999875
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=373.67 Aligned_cols=258 Identities=34% Similarity=0.608 Sum_probs=197.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEE
Confidence 4799999999999999999999999999999998654332223457789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeecceeeccCC
Confidence 999999999988753 336799999999999999999999999999999999999998 4789999999999875432
Q ss_pred -CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 -KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......||+.|+|||++.+. ++.++||||||+++|+|++|+.||...........+...... ....++.++.+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIEAKD 241 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHHHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHHHHH
Confidence 223456799999999988654 588999999999999999999999877665555444332221 12457899999
Q ss_pred HHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 334 FVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
||.+||..||.+|||+.++++||||....
T Consensus 242 li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999999999999999999999998654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=380.10 Aligned_cols=255 Identities=26% Similarity=0.492 Sum_probs=213.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYV 172 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~ 172 (562)
.++|++.+.||+|+||.||+|.+..+|+.||||++... ..+.+.+|+.+++.+.+||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 35799999999999999999999999999999998643 346788999999999779999999999987 6789
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|...+ ..+++..++.++.||+.||.|||++||+||||||+|||++. +...+||+|||+|...
T Consensus 109 ~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEEEECCCCCCHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEEC
T ss_pred EEEEeccCchhHHHHH-----HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceEc
Confidence 9999999999998876 24899999999999999999999999999999999999984 3348999999999887
Q ss_pred CCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHH-------------HhCC
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEV-------------LRNK 316 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~-------------~~~~ 316 (562)
.........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ...+..+ ....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 76666667789999999999865 468899999999999999999999955432 2222111 1111
Q ss_pred CCCC--------------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 PDFR--------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 ~~~~--------------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.... ......+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 1110 011123789999999999999999999999999999999754
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-47 Score=382.19 Aligned_cols=266 Identities=34% Similarity=0.601 Sum_probs=193.0
Q ss_pred ccccceeecc-eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc---
Q 008547 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--- 168 (562)
Q Consensus 93 ~~~~~y~i~~-~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--- 168 (562)
.+.++|.+.+ .||+|+||.||+|.++.+|+.||||++.... ...+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--------HHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--------HHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 3556899965 6999999999999999999999999986431 223344443333479999999999875
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...+++||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 5568999999999999999876655679999999999999999999999999999999999999865556789999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhH----HHHHHhCCCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI----FKEVLRNKPDFRRK 322 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~ 322 (562)
++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||........ ...+......++.+
T Consensus 177 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 177 FAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred cceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 99865432 3345688999999999854 357889999999999999999999977655433 23333344445555
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCC
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~ 367 (562)
.+..+++++.+||.+||..||.+|||+.++|+||||+........
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~ 300 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCCC
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCCC
Confidence 667899999999999999999999999999999999976544433
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=376.73 Aligned_cols=266 Identities=27% Similarity=0.497 Sum_probs=219.8
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
+.......++|++.+.||+|+||.||+|.+..+|+.||||++..... ....+.+|+.+++.+.+||||+++++++.
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 33344566789999999999999999999999999999999865432 34678899999999966999999999997
Q ss_pred c------CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 168 D------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 168 ~------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
. .+.+|+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---CCCCE
Confidence 6 56899999999999999998765556799999999999999999999999999999999999998 57889
Q ss_pred EEeeccCccccCCC-CCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh
Q 008547 242 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 242 kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 314 (562)
||+|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+..
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 248 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence 99999999765432 2234567999999999985 3468899999999999999999999988877766666655
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.... ......+++.+.+||.+||..||.+||++.++++||||+...
T Consensus 249 ~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 249 NPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp SCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred Cccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 4322 222356789999999999999999999999999999998753
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=373.82 Aligned_cols=264 Identities=26% Similarity=0.393 Sum_probs=219.8
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+.+.++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++...+
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCC
Confidence 345677999999999999999999999999999999998766555566778899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|+||||++|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~ 159 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAK 159 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCSSST
T ss_pred eEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEEeCCCcc
Confidence 999999999999999988543 5799999999999999999999999999999999999998 47899999999998
Q ss_pred ccCCCC--CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC-CCCCCCCC
Q 008547 251 FIKPGK--KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-FRRKPWPS 326 (562)
Q Consensus 251 ~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~ 326 (562)
...... .....+||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+................ ......+.
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T 4eqm_A 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD 239 (294)
T ss_dssp TC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTT
T ss_pred ccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccC
Confidence 764332 23346799999999988764 588899999999999999999999888877666665554322 11223467
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+|+.+.++|.+||..||.+||+..+.+.++|..-
T Consensus 240 ~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 240 IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 8999999999999999999996667677777553
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=368.17 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=214.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+..+|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.++..+.+||||+++++++.+.+.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~ 85 (289)
T 1x8b_A 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85 (289)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE
T ss_pred ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 34567899999999999999999999999999999998765332 23567788999999999669999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-------------
Q 008547 172 VYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK------------- 236 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~------------- 236 (562)
.++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999999885432 26799999999999999999999999999999999999998432
Q ss_pred ---CCCCeEEeeccCccccCCCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHH
Q 008547 237 ---EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 311 (562)
Q Consensus 237 ---~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 311 (562)
....+||+|||++....... ...||+.|+|||++.+.. +.++|||||||++|+|++|.+|+.... ....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHH
T ss_pred ccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHH
Confidence 45589999999998765432 346999999999987653 468999999999999999998875442 3344
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+...... ...+.+++++.+||.+||..||.+|||+.++++||||+..
T Consensus 240 ~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 240 IRQGRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHTTCCC---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHcCCCC---CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 4443321 1224689999999999999999999999999999999864
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=389.51 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=211.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc------
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------ 168 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------ 168 (562)
..+|.+.+.||+|+||.||+|.+..+|+.||||++..... ...+|+.+|+.| +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHc-CCCCccceeeEEeccCCCCc
Confidence 4579999999999999999999999999999999865432 124799999999 59999999998853
Q ss_pred CCeEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 169 DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
...+++||||+++ +|...+.. .....+++..++.++.||+.||.|||++||+||||||+||||+. +.+.+||+||
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~--~~~~~kl~DF 201 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET--TTTEEEECCC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC--CCCeEEeccc
Confidence 2247799999975 66665532 34567999999999999999999999999999999999999984 3467899999
Q ss_pred cCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC---------
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--------- 315 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~--------- 315 (562)
|+++...........+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus 202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99987765555566789999999999865 4688999999999999999999999988876666555431
Q ss_pred ---CCCCCC--------CC-----CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 316 ---KPDFRR--------KP-----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 316 ---~~~~~~--------~~-----~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.+.. .+ .+.+++++.+||.+||..||.+||++.++++||||+...
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 111111 11 135689999999999999999999999999999998754
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=380.60 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=213.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+. ||||+++++++.+.+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEEE
Confidence 57999999999999999999999999999999986543 23445667889999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
|||+++++|...+ .....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 103 ~e~~~~~~l~~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 103 FEFVDHTILDDLE--LFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EECCSEEHHHHHH--HSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCTTC------
T ss_pred EecCCcchHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEEEeCCCceeecCC
Confidence 9999988877655 3345799999999999999999999999999999999999998 478999999999976543
Q ss_pred CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC--------------
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-------------- 318 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------- 318 (562)
........||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+......
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 233445689999999999876 4588999999999999999999999888776655554321100
Q ss_pred -----CCC--------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 319 -----FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 319 -----~~~--------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+. ..++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 000 0124678999999999999999999999999999999864
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=384.14 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=213.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++...+..
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCC
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCce
Confidence 357999999999999999999999999999999986543211 11234678999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++ +|...+. .....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 88 ~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHH-hcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEecccceec
Confidence 999999976 7877663 3345689999999999999999999999999999999999998 4789999999999876
Q ss_pred CC-CCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC------
Q 008547 253 KP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP------ 323 (562)
Q Consensus 253 ~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 323 (562)
.. .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+...........
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 43 333456689999999999864 357889999999999999999999999888777777655321111111
Q ss_pred ------------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 324 ------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 324 ------------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 134678999999999999999999999999999998754
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=388.74 Aligned_cols=257 Identities=27% Similarity=0.517 Sum_probs=214.6
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|.+.+.||+|+||.||+|.+. .+|+.||||++.+.... .....+.+.+|+.+++.+.+||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 58999999999999999999984 58999999998654221 112334567899999999779999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEE
T ss_pred EEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCcEEEeeCCCCee
Confidence 99999999999999988544 5699999999999999999999999999999999999998 478999999999976
Q ss_pred cCCCC--CcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCC----hhhHHHHHHhCCCCCCCC
Q 008547 252 IKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRK 322 (562)
Q Consensus 252 ~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~ 322 (562)
..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... ...+...+....+.+
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 285 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY--- 285 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC---
Confidence 53322 2335689999999999875 24788999999999999999999997543 233444454444332
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
.+.++..+.+||.+||..||.+|| ++.++++||||+..
T Consensus 286 -~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 286 -PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred -CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 246889999999999999999999 99999999999864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=378.38 Aligned_cols=262 Identities=23% Similarity=0.390 Sum_probs=214.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-- 170 (562)
.+..+|.+.+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.+++.+. ||||+++++++....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 3557899999999999999999999999999999998754322 23567789999999995 999999999998655
Q ss_pred eEEEEEeccCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc-CCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~-~~~~~~vkl~DfG~ 248 (562)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+.. .+.++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 78999999999999998865432 34999999999999999999999999999999999999821 12467799999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcc---------cCCCCCcchHHHHHHHHHHHhCCCCCCCCC----hhhHHHHHHhC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLK---------RKSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRN 315 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~~~~~ 315 (562)
+.............||+.|+|||++. ..++.++|||||||++|+|++|+.||.... ..+....+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 98877666666778999999999875 445889999999999999999999996433 23455555554
Q ss_pred CCCC-------------------CC--CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 316 KPDF-------------------RR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 316 ~~~~-------------------~~--~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
.+.. +. .....+++.+.+||.+||..||++|||+.++|+||-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 4311 00 001123457889999999999999999999999985
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=385.61 Aligned_cols=259 Identities=31% Similarity=0.489 Sum_probs=201.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGG
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCccc
Confidence 4568999999999999999999999999999999986543 23445678889999999995 99999999999754
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
..+|+|+|++ +++|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL~DFG 177 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFG 177 (367)
T ss_dssp GCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECC--
T ss_pred cCCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEEeecc
Confidence 5689999999 7899887732 5799999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------- 316 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------- 316 (562)
+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 178 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 178 LARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9986543 2345689999999999865 56889999999999999999999999888766665554311
Q ss_pred --------------CCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 317 --------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 317 --------------~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
...+.. .++.+++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 320 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence 111111 12457889999999999999999999999999999997543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=384.97 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=205.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+ +||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTT
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccc
Confidence 4468999999999999999999999999999999987543 2344567788999999999 5999999999998665
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 101 ~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg 172 (371)
T 2xrw_A 101 EFQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 172 (371)
T ss_dssp TCCEEEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCCC
T ss_pred cccceEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEEEee
Confidence 78999999975 7887773 3589999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC--------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-------- 318 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------- 318 (562)
++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+......
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9987665544556789999999999865 4688999999999999999999999988877766666543211
Q ss_pred --------------CCCCC---------CCC-------CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 319 --------------FRRKP---------WPS-------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 319 --------------~~~~~---------~~~-------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+.... ++. .++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 10000 000 14678999999999999999999999999999864
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=367.29 Aligned_cols=259 Identities=27% Similarity=0.474 Sum_probs=224.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
...+.|.+.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+ +||||+++++++.....+
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 95 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKL 95 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeE
Confidence 345679999999999999999999999999999999875542 23567889999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 96 ~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~ 169 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQL 169 (303)
T ss_dssp EEEEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCCEEEeecccceec
Confidence 99999999999998873 35799999999999999999999999999999999999998 4788999999999776
Q ss_pred CCCC-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.... ......||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+...... .....++..
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (303)
T 3a7i_A 170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKP 246 (303)
T ss_dssp BTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSCCHH
T ss_pred CccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCccccCHH
Confidence 4432 23456799999999998654 588999999999999999999999888777766666554432 223468899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+.+||.+||..||.+|||+.++++||||.....
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 999999999999999999999999999987543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=383.66 Aligned_cols=260 Identities=29% Similarity=0.460 Sum_probs=217.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+..+|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCccc
Confidence 3468999999999999999999999999999999986432 3345578899999999995 99999999999754
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...|+||||+. |+|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGL 174 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred cceEEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC---CCCCEEEEeCcc
Confidence 47899999997 589887743 4699999999999999999999999999999999999998 578899999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC---
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF--- 319 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 319 (562)
+........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.......
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 986543221 245689999999998643 36889999999999999999999999888777766654311110
Q ss_pred --------------------CCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 320 --------------------RRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 320 --------------------~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
... ..+.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 322 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence 011 12467899999999999999999999999999999998643
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=377.65 Aligned_cols=257 Identities=26% Similarity=0.486 Sum_probs=208.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCC-CCcceEEEEEEcCCeEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~l~~~~~~~~~~~ 173 (562)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... .....+.+.+|+.+++.+.+| |||+++++++.....+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 45799999999999999999987 5688999999876543 344567889999999999632 99999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|||+ .+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus 86 lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC-
T ss_pred EEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccC
Confidence 99994 58899998854 46799999999999999999999999999999999999996 4779999999998765
Q ss_pred CCCC---cccccCCCcccCchhcc------------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCC
Q 008547 254 PGKK---FQDIVGSAYYVAPEVLK------------RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKP 317 (562)
Q Consensus 254 ~~~~---~~~~~gt~~y~aPE~~~------------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~ 317 (562)
.... ....+||+.|+|||++. ..++.++|||||||++|+|++|+.||...... .....+.....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 4332 23568999999999985 34577899999999999999999999765432 33344443322
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
... .....++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 239 ~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 239 EIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp CCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred ccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 222 1234578899999999999999999999999999998643
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=366.94 Aligned_cols=259 Identities=33% Similarity=0.593 Sum_probs=219.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+ +||||+++++++.+.+..|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE
Confidence 34579999999999999999999999999999999865432 23557889999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|.+++ .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++....
T Consensus 82 lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 82 LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECE
T ss_pred EEEEecCCCcHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccccC
Confidence 999999999999877 3446799999999999999999999999999999999999998 47889999999997653
Q ss_pred CC---CCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhh-HHHHHHhCCCCCCCCCCCCC
Q 008547 254 PG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 254 ~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 327 (562)
.. ......+||+.|+|||++.+.. +.++||||||+++|+|++|+.||....... .+..+..... ....++.+
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 234 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKI 234 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT--TSTTGGGS
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc--ccCchhhc
Confidence 22 2234568999999999987543 568999999999999999999998765543 3333333222 22334678
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 99999999999999999999999999999998754
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-48 Score=397.48 Aligned_cols=252 Identities=19% Similarity=0.229 Sum_probs=203.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEE-------EE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFY-------NA 165 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~-------~~ 165 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. +||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 468999999999999999999999999999999997654444556788999995555443 599999998 77
Q ss_pred EEcCCe-----------------EEEEEeccCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 008547 166 FEDDNY-----------------VYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223 (562)
Q Consensus 166 ~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 223 (562)
+.+.+. .|+||||+ +|+|.+++..... ..+++..+..++.||+.||.|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 766543 89999999 6799998864321 123347888899999999999999999999
Q ss_pred cCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhcccC------------CCCCcchHHHHHHHH
Q 008547 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK------------SGPESDVWSIGVITY 291 (562)
Q Consensus 224 Dlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~------------~~~~~DiwslG~il~ 291 (562)
||||+|||++ .++.+||+|||+|+... ......+| +.|+|||++.+. ++.++|||||||++|
T Consensus 231 Dikp~NIll~---~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 231 YLRPVDIVLD---QRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CCCGGGEEEC---TTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCHHHEEEc---CCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 9999999998 46899999999998643 23445678 999999998654 688999999999999
Q ss_pred HHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 292 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 292 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+|++|+.||.+.........+.. .++.+++++.+||.+||..||.+|||+.++++||||+..
T Consensus 305 elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 305 WIWCADLPITKDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHHHSSCCC------CCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHHHCCCCCcccccccchhhhhh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 99999999976654433333222 235789999999999999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=374.68 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=212.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
...+|.+.+.||+|+||.||+|.+..+|+ .||||++.... .....+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGR 123 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGG
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 34689999999999999999999986665 49999987542 344567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..|+||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLSR 199 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCSSCE
T ss_pred ccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CCCCEEECCCCccc
Confidence 99999999999999998743 345799999999999999999999999999999999999998 57899999999998
Q ss_pred ccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 251 FIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 251 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..... .+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 276 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR---LPAP 276 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC---CCCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCC---CCCC
Confidence 7643321 223356788999999874 45889999999999999999 9999999988888887776532 2223
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+++.+.+||.+||..||.+|||+.++++
T Consensus 277 ~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 568999999999999999999999999975
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=392.09 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=195.9
Q ss_pred cccceee-cceeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--c
Q 008547 94 FDRRYTI-GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--D 168 (562)
Q Consensus 94 ~~~~y~i-~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~ 168 (562)
+.+.|.+ +++||+|+||.||+|.++ .+++.||||++..... ...+.+|+.+|+.|. ||||+++++++. .
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELK-HPNVISLQKVFLSHA 91 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCC-CTTBCCCCEEEEETT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcC-CCCeeeEeeEEecCC
Confidence 3456877 568999999999999965 5788999999975532 245789999999995 999999999995 4
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC-CCCCC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSS 240 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~-~~~~~ 240 (562)
...+|+||||+. |+|.+.+.... ...+++..++.++.||+.||.|||++||+||||||+||||... ..++.
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 92 DRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred CCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence 778999999996 58887774321 2349999999999999999999999999999999999999532 25689
Q ss_pred eEEeeccCccccCCC----CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh--------
Q 008547 241 LKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 306 (562)
Q Consensus 241 vkl~DfG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------- 306 (562)
+||+|||+|+..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 999999999876432 22345689999999999865 3688999999999999999999999765442
Q ss_pred -hHHHHHHhCCCCCCCCCCC----------------------------------CCCHHHHHHHHHcCccCccCCCCHHH
Q 008547 307 -GIFKEVLRNKPDFRRKPWP----------------------------------SISNSAKDFVKKLLVKDPRARLTAAQ 351 (562)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~ll~~~l~~dP~~Rps~~~ 351 (562)
+.+..+...........|+ ..++.+.+||.+||.+||.+|||+.+
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 3333333221111112221 12678999999999999999999999
Q ss_pred HhcCccccccC
Q 008547 352 ALSHPWVREGG 362 (562)
Q Consensus 352 ~l~hp~f~~~~ 362 (562)
+|+||||++..
T Consensus 331 ~L~hp~f~~~~ 341 (405)
T 3rgf_A 331 AMQDPYFLEDP 341 (405)
T ss_dssp HHTSGGGTSSS
T ss_pred HhcChhhccCC
Confidence 99999998754
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=380.62 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=205.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
+.++|++.+.||+|+||.||+|.++.+|+.||||++.... .....+.+.+|+.++++| +||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccch
Confidence 3457999999999999999999999999999999987543 234567899999999999 5999999999886543
Q ss_pred ------------------------------------------------------eEEEEEeccCCCChHHHHHhhcC-CC
Q 008547 171 ------------------------------------------------------YVYIAMELCEGGELLDRILAKKD-SR 195 (562)
Q Consensus 171 ------------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~-~~ 195 (562)
.+++||||+++|+|.+++..... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 38999999999999998854322 23
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC-------------Cccccc
Q 008547 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-------------KFQDIV 262 (562)
Q Consensus 196 l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~-------------~~~~~~ 262 (562)
.++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... .....+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 56667899999999999999999999999999999998 47899999999998765432 223457
Q ss_pred CCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCcc
Q 008547 263 GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341 (562)
Q Consensus 263 gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 341 (562)
||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+.... ....++..++++.+||.+||..
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLK---FPLLFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTC---CCHHHHHHCHHHHHHHHHHHCS
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccC---CCcccccCChhHHHHHHHHccC
Confidence 9999999999865 468899999999999999998776521 112222222221 1111234567889999999999
Q ss_pred CccCCCCHHHHhcCccccc
Q 008547 342 DPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 342 dP~~Rps~~~~l~hp~f~~ 360 (562)
||.+|||+.++|+||||++
T Consensus 313 ~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 313 SPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SGGGSCCHHHHHHSTTCCC
T ss_pred CCCcCCCHHHHhhchhhhc
Confidence 9999999999999999985
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=384.18 Aligned_cols=257 Identities=32% Similarity=0.508 Sum_probs=213.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE-
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV- 172 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~- 172 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSST
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcC-CCCchhhhhheeccCCcc
Confidence 5578999999999999999999999999999999987543 23445678899999999995 99999999999877654
Q ss_pred -----EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 173 -----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 173 -----~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
|+||||+. ++|.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kL~Dfg 189 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFG 189 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECSTT
T ss_pred cceeEEEEEcccc-ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC---CCCCEEEEecC
Confidence 99999997 5887765 24599999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC--------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-------- 317 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-------- 317 (562)
++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.....
T Consensus 190 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 190 LARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp CC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9986543 2345689999999998865 568999999999999999999999998887666666543111
Q ss_pred ---------------CCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 ---------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 ---------------~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..... .++.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 00110 1245789999999999999999999999999999998653
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=374.19 Aligned_cols=265 Identities=26% Similarity=0.374 Sum_probs=219.5
Q ss_pred cccceeecceeeccCCeEEEEEEEc-CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEE---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE--- 167 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~--- 167 (562)
+.++|++.+.||+|+||.||+|.+. .+|+.||+|++....... .....+.+|+.+++.+. +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4468999999999999999999985 678899999986543211 12234567888887774 5999999999987
Q ss_pred --cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEee
Q 008547 168 --DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245 (562)
Q Consensus 168 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~D 245 (562)
....+++||||+. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEec
Confidence 5678999999997 5999988766556799999999999999999999999999999999999998 478999999
Q ss_pred ccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC----
Q 008547 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR---- 320 (562)
Q Consensus 246 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 320 (562)
||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+........
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 999987654444556789999999998865 468899999999999999999999998887777766653211000
Q ss_pred -------------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 321 -------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 321 -------------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
...++.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 0123568899999999999999999999999999999997653
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=370.81 Aligned_cols=260 Identities=27% Similarity=0.474 Sum_probs=220.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~~~ 171 (562)
.++|++.+.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.+ +||||+++++++. ....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCe
Confidence 46899999999999999999999999999999998754321 123467889999999999 4999999999984 5568
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||++++ |.+.+.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeeccccccc
Confidence 99999999876 77777665667899999999999999999999999999999999999998 478999999999987
Q ss_pred cCCC---CCcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 252 IKPG---KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 252 ~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
.... .......||+.|+|||++.+. .+.++||||||+++|+|++|+.||.+.........+......++ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----~ 234 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP----G 234 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----S
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----C
Confidence 5432 223456799999999998753 26789999999999999999999998888888888777654332 4
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 235 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 67899999999999999999999999999999997654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=364.92 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=199.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+..+...++.+ +||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEE
Confidence 3589999999999999999999999999999999865432 122233344444446666 69999999999999999999
Q ss_pred EEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 175 AMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
||||++ |+|.+.+.. .....+++..++.++.||+.||.|||++ ||+||||||+|||++ .++.+||+|||++..
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCDFGISGY 159 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTCCEEBCCC-----
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecCCccc
Confidence 999997 488776643 3456799999999999999999999998 999999999999998 478999999999987
Q ss_pred cCCCCCcccccCCCcccCchhcc-----cCCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCC
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
...........||+.|+|||++. ..++.++|||||||++|+|++|+.||... .............. ...+..
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 237 (290)
T 3fme_A 160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--PQLPAD 237 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--CCCCTT
T ss_pred ccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--CCcccc
Confidence 76555555568999999999963 23577899999999999999999999763 33344444444332 122234
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 6899999999999999999999999999999998653
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-47 Score=388.99 Aligned_cols=259 Identities=17% Similarity=0.183 Sum_probs=198.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-CCCCcceEE-------EEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFY-------NAFE 167 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~hp~iv~l~-------~~~~ 167 (562)
..|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.|. +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999999999999999998766545566778889977666664 499988755 4554
Q ss_pred cC-----------------CeEEEEEeccCCCChHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHHHcCceecc
Q 008547 168 DD-----------------NYVYIAMELCEGGELLDRILAKKDSRYTEKDA------AVVVRQMLRVAAECHLHGLVHRD 224 (562)
Q Consensus 168 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~------~~i~~qi~~~l~~lH~~~iiHrD 224 (562)
.. ..+|+||||++ |+|.+++.... ..+++..+ ..++.||+.||.|||++||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 33 34899999998 89999886542 23444555 67779999999999999999999
Q ss_pred CCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCC
Q 008547 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFW 301 (562)
Q Consensus 225 lkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~ 301 (562)
|||+|||++ .++.+||+|||+|+.... ......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.
T Consensus 220 ikp~NIll~---~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIM---PDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEEC---TTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEEC---CCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 999999998 478999999999986542 2224567799999999864 46889999999999999999999997
Q ss_pred CCChhhH--HHH---HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 302 DKTEDGI--FKE---VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 302 ~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+...... +.. .......+..+.++.+++.+.+||.+||..||++|||+.++|+||||++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 7643211 000 11111223333446789999999999999999999999999999999864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=376.96 Aligned_cols=252 Identities=25% Similarity=0.365 Sum_probs=214.6
Q ss_pred ccceeecceeeccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
.++|.+++.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+.+||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 358999999999999999999864 345679999987543 34456789999999999956999999999999
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEec
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~ 233 (562)
..+.+|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC
Confidence 9999999999999999999886543 23589999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhH
Q 008547 234 SAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308 (562)
Q Consensus 234 ~~~~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~ 308 (562)
.++.+||+|||+++...... ......+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+.
T Consensus 238 ---~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 238 ---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp ---TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred ---CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 57899999999998654432 2234567889999998865 46889999999999999999 9999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+..+... .....+++++.+||.+||..||.+||++.++++
T Consensus 315 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 315 FKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp HHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7777665422 223468899999999999999999999999985
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=366.00 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=208.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|++.+.||+|+||.||+|.+ +|+.||||++..... .....+.+.+|+.+++++. ||||+++++++...+.+++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSTTCCEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCceEE
Confidence 45899999999999999999975 688999999876543 3445678899999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 175 AMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||++..
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---TTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---CCCcEEECCCCCCcc
Confidence 999999999999885321 123899999999999999999999999 99999999999998 578999999999976
Q ss_pred cCCCC-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 252 IKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 252 ~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
..... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+........ ....+++
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 266 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--IPRNLNP 266 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCH
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCccCCH
Confidence 54332 23456899999999998764 58899999999999999999999998888777776654433322 2246899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc--Ccccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~--hp~f~~~ 361 (562)
++.+||.+||..||.+|||+.++++ .++++..
T Consensus 267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999987 5666543
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=385.37 Aligned_cols=266 Identities=23% Similarity=0.388 Sum_probs=213.1
Q ss_pred cccccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-------CCCCcc
Q 008547 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-------GHENVV 160 (562)
Q Consensus 88 ~~~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-------~hp~iv 160 (562)
+...+.+.++|++.+.||+|+||.||+|.+..+|+.||||++... ....+.+.+|+.+++.+. +||||+
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv 104 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVV 104 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 344556778999999999999999999999999999999998643 235677889999999985 278899
Q ss_pred eEEEEEE----cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccC
Q 008547 161 KFYNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSA 235 (562)
Q Consensus 161 ~l~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~ 235 (562)
++++++. ....+|+||||+ +++|.+.+.......+++..++.++.||+.||.|||++ ||+||||||+||||+..
T Consensus 105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred eeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence 9999988 667899999999 67888888766667799999999999999999999998 99999999999999842
Q ss_pred C----------------------------------------------CCCCeEEeeccCccccCCCCCcccccCCCcccC
Q 008547 236 K----------------------------------------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269 (562)
Q Consensus 236 ~----------------------------------------------~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~a 269 (562)
+ ....+||+|||+|...... ....+||+.|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~a 261 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCC
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccC
Confidence 1 1137999999999876432 345689999999
Q ss_pred chhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh------hHHHHHHhCCCCCC----------------------
Q 008547 270 PEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED------GIFKEVLRNKPDFR---------------------- 320 (562)
Q Consensus 270 PE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~---------------------- 320 (562)
||++.+. ++.++|||||||++|+|++|+.||...... .....+.......+
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 9998664 688999999999999999999999765422 22222211000000
Q ss_pred ---CCC-------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 321 ---RKP-------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 321 ---~~~-------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
..+ ....++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000 0122456889999999999999999999999999973
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=366.78 Aligned_cols=261 Identities=28% Similarity=0.506 Sum_probs=215.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+...++|.+.+.||+|+||.||+|.+..+|+.||||++.... ..+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTD 98 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCE
Confidence 345568999999999999999999999999999999987543 345688999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+||||+++++|.+++.. ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++..
T Consensus 99 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred EEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchh
Confidence 9999999999999988753 346799999999999999999999999999999999999998 478899999999976
Q ss_pred cCCCC-CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 252 IKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 252 ~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
..... ......||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+....... ......+++
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 253 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT-FRKPELWSD 253 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CSSGGGSCH
T ss_pred hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcc-cCCcccCCH
Confidence 54332 23456799999999998654 5889999999999999999999998877666555554443221 112235789
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+.+||.+||..||.+|||+.++++||||+....
T Consensus 254 ~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999999999999999999999999999997543
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=371.21 Aligned_cols=260 Identities=33% Similarity=0.507 Sum_probs=212.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE-----
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----- 167 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~----- 167 (562)
.+..+|++.+.||+|+||.||+|.+..+|+.||+|++... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCB
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccc
Confidence 4567899999999999999999999999999999998654 245667889999999999 5999999999874
Q ss_pred ---------cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCC
Q 008547 168 ---------DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238 (562)
Q Consensus 168 ---------~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~ 238 (562)
.....|+||||++ |+|.+.+. .+.+++..++.++.||+.||.|||++||+||||||+|||++. .+
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~ 157 (320)
T 2i6l_A 84 LTDDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--ED 157 (320)
T ss_dssp CCC----CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TT
T ss_pred cccccccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CC
Confidence 4478999999997 59988772 357999999999999999999999999999999999999974 45
Q ss_pred CCeEEeeccCccccCCC----CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHH
Q 008547 239 SSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 312 (562)
+.+||+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 78999999999876432 12234567999999998753 4688999999999999999999999988877766666
Q ss_pred HhCCCCCC----------------------C----CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 313 LRNKPDFR----------------------R----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 313 ~~~~~~~~----------------------~----~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
....+... . ..++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 54332111 0 01246899999999999999999999999999999999754
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=367.34 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=216.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 91 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKL 91 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeE
Confidence 45678999999999999999999999999999999986543 23457788999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 92 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCccc
Confidence 9999999999998877543 45699999999999999999999999999999999999998 4788999999987532
Q ss_pred CC-CCCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 253 KP-GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 253 ~~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
.. ........||+.|+|||++. ..++.++||||||+++|+|++|..||...........+........ ....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 246 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPS 246 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGG
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCcc
Confidence 11 11223457999999999873 3457899999999999999999999988887777777766543221 1224
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++..+.+||.+||..||.+|||+.++++||||+...
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 5789999999999999999999999999999998754
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=383.15 Aligned_cols=261 Identities=24% Similarity=0.429 Sum_probs=220.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchh--------------hHHHHHHHHHHHHHccCCCCc
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI--------------AVEDVKREVKILQALAGHENV 159 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~--------------~~~~~~~E~~~l~~l~~hp~i 159 (562)
+.++|.+.+.||+|+||.||+|.+ +|+.||||++......... ..+.+.+|+.+++.+. ||||
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i 105 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYC 105 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTTB
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCCc
Confidence 446899999999999999999987 8999999998654322111 1278899999999995 9999
Q ss_pred ceEEEEEEcCCeEEEEEeccCCCChHHH------HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEe
Q 008547 160 VKFYNAFEDDNYVYIAMELCEGGELLDR------ILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLF 232 (562)
Q Consensus 160 v~l~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll 232 (562)
+++++++.+.+.+++||||+++|+|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+|||+
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence 9999999999999999999999999887 533335789999999999999999999999 999999999999999
Q ss_pred ccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhcccC-C-CC-CcchHHHHHHHHHHHhCCCCCCCCCh-hhH
Q 008547 233 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GP-ESDVWSIGVITYILLCGRRPFWDKTE-DGI 308 (562)
Q Consensus 233 ~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~-~~DiwslG~il~el~~g~~pf~~~~~-~~~ 308 (562)
+ .++.+||+|||++...... ......||+.|+|||++.+. . +. ++|||||||++|+|++|..||..... .+.
T Consensus 186 ~---~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 D---KNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp C---TTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred c---CCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 8 5789999999999876443 34556899999999998765 2 34 89999999999999999999988776 666
Q ss_pred HHHHHhCCCCCCCCC---------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 309 FKEVLRNKPDFRRKP---------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 309 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
...+......++... .+.+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 666666544433210 14688999999999999999999999999999999864
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-46 Score=378.86 Aligned_cols=258 Identities=26% Similarity=0.407 Sum_probs=215.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.... .....+.+.+|+.+++.+ +||||+++++++..++.++
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 107 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS 107 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEE
Confidence 3458999999999999999999999999999999987643 345667899999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||++...
T Consensus 108 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQL 182 (360)
T ss_dssp EEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHH
T ss_pred EEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCccc
Confidence 999999999999988543 5689999999999999999999996 999999999999998 4788999999998754
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHH--------------------
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-------------------- 311 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-------------------- 311 (562)
... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........
T Consensus 183 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 183 IDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 322 22345899999999998764 58899999999999999999999977655433221
Q ss_pred ----------------------HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 312 ----------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 312 ----------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+..... ...+...++.++.+||.+||..||.+|||+.++|+||||+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 111111 1112234788999999999999999999999999999998753
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=370.64 Aligned_cols=264 Identities=27% Similarity=0.386 Sum_probs=216.8
Q ss_pred ccccccceeecceeeccCCeEEEEEEE-cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCC------CcceEE
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE------NVVKFY 163 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp------~iv~l~ 163 (562)
.+.+.++|++.+.||+|+||.||+|.+ ..+|+.||||++... ....+.+.+|+.+++.+. |+ +|++++
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLN-TTDPNSTFRCVQML 83 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCEE
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhh-hcCCCCceeeEeee
Confidence 345667999999999999999999998 567899999998643 235677889999999885 54 599999
Q ss_pred EEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC------
Q 008547 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE------ 237 (562)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~------ 237 (562)
+++...+.+++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++..+.
T Consensus 84 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 84 EWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence 9999999999999999 889999987666567999999999999999999999999999999999999984211
Q ss_pred ----------CCCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh
Q 008547 238 ----------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED 306 (562)
Q Consensus 238 ----------~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 306 (562)
++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred ccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 56899999999986543 2345689999999999865 4689999999999999999999999887776
Q ss_pred hHHHHHHhCCCCCCC----------------CCC------------------------CCCCHHHHHHHHHcCccCccCC
Q 008547 307 GIFKEVLRNKPDFRR----------------KPW------------------------PSISNSAKDFVKKLLVKDPRAR 346 (562)
Q Consensus 307 ~~~~~~~~~~~~~~~----------------~~~------------------------~~~~~~~~~ll~~~l~~dP~~R 346 (562)
+....+.......+. ..| ...++++.+||.+||..||.+|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 655444321111110 001 1124678899999999999999
Q ss_pred CCHHHHhcCccccccC
Q 008547 347 LTAAQALSHPWVREGG 362 (562)
Q Consensus 347 ps~~~~l~hp~f~~~~ 362 (562)
||+.++++||||+...
T Consensus 321 pt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 321 ITLREALKHPFFDLLK 336 (339)
T ss_dssp CCHHHHTTSGGGGGGG
T ss_pred cCHHHHhcCHHHHHHh
Confidence 9999999999998753
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=368.61 Aligned_cols=262 Identities=27% Similarity=0.486 Sum_probs=198.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+ +||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEE
Confidence 3579999999999999999999988999999998865432 23456788999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 175 AMELCEGGELLDRILAK------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEEEEeccc
Confidence 99999999999988531 245689999999999999999999999999999999999998 478999999999
Q ss_pred ccccCCCC------CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 249 SDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 249 a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+....... ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||....................
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 87654321 1234579999999999864 568999999999999999999999988877766665554432211
Q ss_pred ------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 ------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...+..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 112356789999999999999999999999999999998754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=376.25 Aligned_cols=260 Identities=21% Similarity=0.257 Sum_probs=218.9
Q ss_pred cccceeecceeeccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
..++|.+++.||+|+||.||+|. +..++..||||++.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~ 145 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ 145 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence 45689999999999999999998 44577899999986432 344566788999999999 59999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
....++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.+..+||
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999999865432 45899999999999999999999999999999999999986545567999
Q ss_pred eeccCccccCC---CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCC
Q 008547 244 TDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 244 ~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
+|||+|+.... ........||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~ 305 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 305 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99999975422 122334578999999998854 56889999999999999998 99999998888888777765432
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
. ....+++.+.+||.+||..||.+|||+.+++++.|+-
T Consensus 306 ~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 306 D---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 2 2346889999999999999999999999999987764
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=373.05 Aligned_cols=262 Identities=22% Similarity=0.362 Sum_probs=206.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC--------chhhHHHHHHHHHHHHHccCCCCcceEEEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--------LPIAVEDVKREVKILQALAGHENVVKFYNA 165 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~ 165 (562)
+..+|.+.+.||+|+||.||+|.+.. |..||||++...... .....+.+.+|+.+++.+. ||||++++++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~ 97 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDI 97 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccceeee
Confidence 45689999999999999999998754 899999998653221 2234578999999999995 9999999999
Q ss_pred EE-----cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 166 FE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 166 ~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
+. ....+|+||||+. |+|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~~~~ 172 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNND 172 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---CCCC
Confidence 84 3447899999997 588887753 345799999999999999999999999999999999999998 4788
Q ss_pred eEEeeccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC-
Q 008547 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 317 (562)
Q Consensus 241 vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~- 317 (562)
+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+.....
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 252 (362)
T 3pg1_A 173 ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252 (362)
T ss_dssp EEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999986655555566789999999998865 468899999999999999999999998887666665543111
Q ss_pred -----------------------CCCCCC----CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 318 -----------------------DFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 318 -----------------------~~~~~~----~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+... .+.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 111111 245688999999999999999999999999999999754
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-45 Score=370.16 Aligned_cols=261 Identities=32% Similarity=0.519 Sum_probs=215.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC---
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--- 169 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 84 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE 84 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence 45678999999999999999999999999999999986432 344567788999999999 599999999988754
Q ss_pred --CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 170 --NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...|+||||+. ++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 85 ~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg 157 (353)
T 2b9h_A 85 NFNEVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFG 157 (353)
T ss_dssp TCCCEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCT
T ss_pred ccceEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEecc
Confidence 67999999996 588887743 4699999999999999999999999999999999999998 47899999999
Q ss_pred CccccCCCC-----------CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh
Q 008547 248 LSDFIKPGK-----------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 248 ~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 314 (562)
++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 998654321 1223578999999998753 468899999999999999999999988876555444332
Q ss_pred C------------------------CCCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 315 N------------------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 315 ~------------------------~~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
. .+.+... .++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence 1 1111111 13468899999999999999999999999999999997654
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=374.95 Aligned_cols=260 Identities=26% Similarity=0.384 Sum_probs=203.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-----
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~----- 170 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++..... ......+|+..+..+ +||||+++++++...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTT
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhc-CCCCcccHHHhhhcccccccc
Confidence 479999999999999999999999999999998865432 223456788888888 5999999999986533
Q ss_pred --eEEEEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHH--HcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 171 --YVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH--~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
.+++||||+++ +|...+.. .....+++..+..++.||+.||.||| ++||+||||||+|||++. .++.+||+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~--~~~~~kl~ 174 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE--ADGTLKLC 174 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET--TTTEEEEC
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC--CCCcEEEe
Confidence 38899999976 55554432 34567899999999999999999999 999999999999999983 36899999
Q ss_pred eccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC--
Q 008547 245 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-- 320 (562)
Q Consensus 245 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 320 (562)
|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+........
T Consensus 175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence 9999988776666667789999999998854 368999999999999999999999998888777766654211000
Q ss_pred ------------------C--------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 321 ------------------R--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 321 ------------------~--------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
. ......++++.+||.+||+.||.+|||+.++|+||||++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 0 001225678999999999999999999999999999998654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=359.10 Aligned_cols=259 Identities=25% Similarity=0.459 Sum_probs=220.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~~~~~ 173 (562)
++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.+ +||||+++++++. ....+|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEE
Confidence 579999999999999999999999999999999976543 344567899999999999 5999999999874 467899
Q ss_pred EEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-----ceeccCCCCceEeccCCCCCCeEEeec
Q 008547 174 IAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-----iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+.| |+||||||+|||++ .++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---SSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---CCCCEEEecC
Confidence 999999999999988543 2345999999999999999999999999 99999999999998 4788999999
Q ss_pred cCccccCCCCC-cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 247 GLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 247 G~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
|++........ .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||...........+..+.... ..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~ 237 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IP 237 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---CC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---CC
Confidence 99977644322 234578999999999865 45888999999999999999999999888877777777664321 22
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+++++.++|.+||..||.+|||+.++++|+|+....
T Consensus 238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 46789999999999999999999999999999998754
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=370.49 Aligned_cols=265 Identities=26% Similarity=0.370 Sum_probs=217.0
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC------cceE
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN------VVKF 162 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~------iv~l 162 (562)
....+.++|++.+.||+|+||.||+|.+..++ ..||+|++... ....+.+.+|+.+++.+. |++ ++.+
T Consensus 13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 87 (355)
T 2eu9_A 13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKFLCVLM 87 (355)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCE
T ss_pred cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCceeEEEe
Confidence 34556789999999999999999999998877 68999998643 235677889999999996 555 8999
Q ss_pred EEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC-------
Q 008547 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA------- 235 (562)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~------- 235 (562)
++++...+.+++||||+ +++|.+.+.......+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 88 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 88 SDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred eeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccc
Confidence 99999999999999999 6788888876665679999999999999999999999999999999999999432
Q ss_pred ---------CCCCCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh
Q 008547 236 ---------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE 305 (562)
Q Consensus 236 ---------~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~ 305 (562)
..++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.....
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 2478899999999986433 2345689999999999865 568899999999999999999999988777
Q ss_pred hhHHHHHHhCCCCCCC----------------CCCC------------------------CCCHHHHHHHHHcCccCccC
Q 008547 306 DGIFKEVLRNKPDFRR----------------KPWP------------------------SISNSAKDFVKKLLVKDPRA 345 (562)
Q Consensus 306 ~~~~~~~~~~~~~~~~----------------~~~~------------------------~~~~~~~~ll~~~l~~dP~~ 345 (562)
.+....+.......+. ..|+ ..+.++.+||.+||..||.+
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 6655444332111110 0011 12357889999999999999
Q ss_pred CCCHHHHhcCccccccC
Q 008547 346 RLTAAQALSHPWVREGG 362 (562)
Q Consensus 346 Rps~~~~l~hp~f~~~~ 362 (562)
|||+.++|+||||+...
T Consensus 325 Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 325 RITLAEALLHPFFAGLT 341 (355)
T ss_dssp SCCHHHHTTSGGGGGCC
T ss_pred CcCHHHHhcChhhcCCC
Confidence 99999999999999754
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=369.35 Aligned_cols=257 Identities=31% Similarity=0.506 Sum_probs=211.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe--
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-- 171 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~-- 171 (562)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...+.
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGG
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccccc
Confidence 4468999999999999999999999999999999987543 23445678899999999995 9999999999987654
Q ss_pred ----EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 172 ----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 172 ----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
+|+||||+. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg 171 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFG 171 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECSTT
T ss_pred cceeEEEEecccc-CCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEeecc
Confidence 599999997 5887655 23599999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC----------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN---------- 315 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~---------- 315 (562)
++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 172 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 172 LARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp CTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred cccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9986543 2345688999999998865 4688999999999999999999999888766655554331
Q ss_pred -------------CCCC----CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 316 -------------KPDF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 316 -------------~~~~----~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+.. ....++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 0100 1122356789999999999999999999999999999998653
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=362.89 Aligned_cols=256 Identities=27% Similarity=0.481 Sum_probs=208.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----- 168 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||++... ....+.+.+|+.+++.+ +||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchh
Confidence 346799999999999999999999999999999998643 24567889999999999 59999999998764
Q ss_pred --------CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 169 --------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 169 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
.+.+|+||||+++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~---~~~~ 154 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRN 154 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc---CCCC
Confidence 4678999999999999998854 335678899999999999999999999999999999999998 4788
Q ss_pred eEEeeccCccccCCC---------------CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCC
Q 008547 241 LKATDFGLSDFIKPG---------------KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDK 303 (562)
Q Consensus 241 vkl~DfG~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~ 303 (562)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 999999999765421 12234579999999999865 46889999999999999998 55433
Q ss_pred -ChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 304 -TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
........+......++.......++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3334455555544445544445678889999999999999999999999999999753
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=369.07 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=216.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC-------CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
..++|.+.+.||+|+||.||+|.+..+ +..||||++.... .......+.+|+.+++.+.+||||+++++++
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 346899999999999999999987543 3579999987553 3445678999999999996699999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEe
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 232 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll 232 (562)
...+.+++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE
Confidence 99999999999999999999986543 2459999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEeeccCccccCCCC---CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhh
Q 008547 233 KSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDG 307 (562)
Q Consensus 233 ~~~~~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~ 307 (562)
+ .++.+||+|||+|....... ......+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+....+
T Consensus 225 ~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~ 301 (382)
T 3tt0_A 225 T---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301 (382)
T ss_dssp C---TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred c---CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 8 47899999999998765432 23345678899999988654 5889999999999999999 999999888887
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....+...... .....+++++.+||.+||..||++|||+.+++++
T Consensus 302 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 302 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHTTCCC---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77777665422 2225689999999999999999999999999863
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=357.97 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=207.9
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
|.....||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.+ +||||+++++++...+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEE
Confidence 334458999999999999999999999999987543 23457789999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCC
Q 008547 178 LCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~ 256 (562)
|+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++. .++.+||+|||++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCCC
Confidence 999999999886542 235678999999999999999999999999999999999984 36899999999998754322
Q ss_pred -CcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhH-HHHHHhCCCCCCCCCCCCCCHHH
Q 008547 257 -KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 257 -~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
......||+.|+|||++.+. ++.++||||||+++|+|++|+.||........ ........ ........+++++
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 255 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIPESMSAEA 255 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--CCCCCCTTSCHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--ccccccccCCHHH
Confidence 23456799999999998653 57899999999999999999999976543322 11111111 1122235688999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.+||.+||..||++||++.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999999999998654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=362.41 Aligned_cols=261 Identities=22% Similarity=0.326 Sum_probs=198.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..++|.+.+.||+|+||.||+|.+..++. .||||++...... ....+.+.+|+.+++.+ +||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-SSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-HHHHHHHHHHHHHHHHC-CCCceehhhceeeccc
Confidence 34589999999999999999999877765 8999998754322 34567899999999999 5999999999998776
Q ss_pred eE------EEEEeccCCCChHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCC
Q 008547 171 YV------YIAMELCEGGELLDRILAKKD----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240 (562)
Q Consensus 171 ~~------~lv~e~~~~g~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~ 240 (562)
.. ++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~---~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc---CCCC
Confidence 55 999999999999998865432 2589999999999999999999999999999999999998 5789
Q ss_pred eEEeeccCccccCCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhC
Q 008547 241 LKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 315 (562)
Q Consensus 241 vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~ 315 (562)
+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+....+....+...
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~ 255 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC
Confidence 99999999987644332 2234567889999998654 5889999999999999999 99999998888888877765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCC-------HHHHhcCccccccC
Q 008547 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-------AAQALSHPWVREGG 362 (562)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps-------~~~~l~hp~f~~~~ 362 (562)
... ...+.+++++.+||.+||..||.+||| +.+++.|||+....
T Consensus 256 ~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 256 NRL---KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp CCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred CCC---CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 432 223568899999999999999999999 78888999998643
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=360.27 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=196.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||.||+|.+..+|+.||||++..... .....+.+..+..+++.+ +||||+++++++...+.+++|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEE
Confidence 479999999999999999999999999999999876532 122233344444566666 699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||+ ++. ...+.......+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||++.....
T Consensus 103 ~e~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 103 MELM-GTC-AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp ECCC-SEE-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEEECCCTTC-----
T ss_pred Eecc-CCc-HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEEEEECCCchhccC
Confidence 9999 444 4445444457899999999999999999999995 999999999999998 478999999999987655
Q ss_pred CCCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 255 GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
........||+.|+|||++. ..++.++|||||||++|+|++|+.||... ........+........ +....+
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 256 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-PGHMGF 256 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-CSSSCC
T ss_pred CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-CccCCC
Confidence 55555668999999999984 24578999999999999999999999774 44556666665543322 223468
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++++.+||.+||..||.+||++.++++||||+...
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE 291 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence 99999999999999999999999999999998653
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=359.40 Aligned_cols=259 Identities=26% Similarity=0.479 Sum_probs=209.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccC-CCCcceEEEEEEcCCe
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDDNY 171 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-hp~iv~l~~~~~~~~~ 171 (562)
...++|.+.+.||+|+||.||+|.+. +|+.||||++..... .....+.+.+|+.+++.+.. ||||+++++++...+.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 34567999999999999999999875 588999999875543 34466789999999999963 6999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++..
T Consensus 103 ~~lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC
T ss_pred EEEEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeecccccc
Confidence 999999 568899998854 35789999999999999999999999999999999999996 47899999999987
Q ss_pred cCCCCC---cccccCCCcccCchhccc------------CCCCCcchHHHHHHHHHHHhCCCCCCCCCh-hhHHHHHHhC
Q 008547 252 IKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 315 (562)
Q Consensus 252 ~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~ 315 (562)
...... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ......+...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCT
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhc
Confidence 643322 234579999999999864 457789999999999999999999976543 2333444433
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..... .....++++.+||.+||..||.+||++.++|+||||+...
T Consensus 256 ~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 256 NHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp TSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred ccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 22222 1234678999999999999999999999999999998643
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=351.94 Aligned_cols=247 Identities=21% Similarity=0.373 Sum_probs=212.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+..++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEEE
Confidence 47999999999999999999976 577899999976543 3467899999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp EECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccccccccc
Confidence 999999999988754 335689999999999999999999999999999999999998 4678999999999865432
Q ss_pred C--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 K--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
. ......+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||......+....+........ ...+++.+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 236 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV 236 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC---CCcCCHHH
Confidence 2 2234467888999999864 56889999999999999999 9999999888888887776543222 24578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.++|.+||..||.+|||+.+++++
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999999864
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=361.61 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=212.7
Q ss_pred ccceeecceeeccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
.++|.+.+.||+|+||.||+|.+. .++..||||++.... .......+.+|+.+++.+.+||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 358999999999999999999875 467789999987543 34456788999999999966999999999999
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEec
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~ 233 (562)
..+.+|+||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc
Confidence 99999999999999999998865431 3489999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhH
Q 008547 234 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308 (562)
Q Consensus 234 ~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~ 308 (562)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 192 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 192 ---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp ---TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred ---CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 578999999999987654322 233467889999998865 45889999999999999999 9999998888777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+...... .....+++++.++|.+||..||.+|||+.++++
T Consensus 269 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 269 FKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp HHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7777665422 223468899999999999999999999999985
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=369.87 Aligned_cols=254 Identities=25% Similarity=0.322 Sum_probs=210.3
Q ss_pred ccceeecceeeccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+++.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++...
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 4689999999999999999998 55677899999997543 2345577999999999997799999999999875
Q ss_pred C-eEEEEEeccCCCChHHHHHhhcC-------------------------------------------------------
Q 008547 170 N-YVYIAMELCEGGELLDRILAKKD------------------------------------------------------- 193 (562)
Q Consensus 170 ~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 193 (562)
+ .+++||||+++|+|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 4 48999999999999998865432
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC---cccc
Q 008547 194 ---------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDI 261 (562)
Q Consensus 194 ---------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~ 261 (562)
..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........ ....
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhcccc
Confidence 1289999999999999999999999999999999999998 467899999999986543322 2345
Q ss_pred cCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcC
Q 008547 262 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339 (562)
Q Consensus 262 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l 339 (562)
.||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+................... ...+++++.++|.+||
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l 333 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCW 333 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHT
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHc
Confidence 78999999998865 46889999999999999998 99999887765555554443322222 2458899999999999
Q ss_pred ccCccCCCCHHHHhcC
Q 008547 340 VKDPRARLTAAQALSH 355 (562)
Q Consensus 340 ~~dP~~Rps~~~~l~h 355 (562)
..||.+|||+.++++|
T Consensus 334 ~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 334 HGEPSQRPTFSELVEH 349 (359)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCChhhCCCHHHHHHH
Confidence 9999999999999864
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-45 Score=373.28 Aligned_cols=265 Identities=26% Similarity=0.439 Sum_probs=210.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc----------CCCCcceEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----------GHENVVKFYN 164 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------~hp~iv~l~~ 164 (562)
..+|.+.+.||+|+||.||+|.+..+|+.||||++.... .....+.+|+.+++.+. +||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 468999999999999999999999999999999986532 35567889999999885 2799999999
Q ss_pred EEEcCC----eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccC---C
Q 008547 165 AFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSA---K 236 (562)
Q Consensus 165 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~---~ 236 (562)
++...+ .+++||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.. .
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 988654 789999999 88999998766667799999999999999999999998 99999999999999632 1
Q ss_pred CCCCeEEeeccCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCCh------hhHH
Q 008547 237 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE------DGIF 309 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~ 309 (562)
..+.+||+|||++..... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+... ....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 345799999999986543 23455899999999998764 68899999999999999999999976542 2222
Q ss_pred HHHHhCCCCCCC--------------------------------------CCCCCCCHHHHHHHHHcCccCccCCCCHHH
Q 008547 310 KEVLRNKPDFRR--------------------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351 (562)
Q Consensus 310 ~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~ 351 (562)
..+.......+. ...+.+++++.+||.+||+.||.+|||+.+
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 222211000000 000124567899999999999999999999
Q ss_pred HhcCccccccCCCCC
Q 008547 352 ALSHPWVREGGDASE 366 (562)
Q Consensus 352 ~l~hp~f~~~~~~~~ 366 (562)
+|+||||++......
T Consensus 331 ll~hp~f~~~~~~~~ 345 (373)
T 1q8y_A 331 LVNHPWLKDTLGMEE 345 (373)
T ss_dssp HHTCGGGTTCTTCTT
T ss_pred HhhChhhhcccCccc
Confidence 999999998654443
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=348.70 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=212.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.+. ||||+++++++...+..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 80 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYI 80 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceEE
Confidence 358999999999999999999865 567899999876543 3466889999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTCCEEECCTTCEEECCT
T ss_pred EEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCCCEEEccCccceecch
Confidence 99999999999988543 34699999999999999999999999999999999999998 578999999999987654
Q ss_pred CCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+......... ...++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDT 233 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHH
Confidence 332 223456778999999876 46889999999999999999 99999888888877777665533322 357899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+.++|.+||..||.+|||+.+++++
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999864
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=365.31 Aligned_cols=256 Identities=29% Similarity=0.521 Sum_probs=213.7
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHcc-CCCCcceEEEEEE
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA-GHENVVKFYNAFE 167 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~~l~~l~-~hp~iv~l~~~~~ 167 (562)
+.+..+|++.+.||+|+||.||+|.+..+|+.||||++........ .....+.+|+.+++.+. +||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 4466789999999999999999999999999999999876533211 12244668999999996 3699999999999
Q ss_pred cCCeEEEEEeccCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 168 DDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 168 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
..+..++|+|++.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. +++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeC
Confidence 99999999999976 8999988543 57899999999999999999999999999999999999983 4678999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
|++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||.... .+......+ .
T Consensus 195 g~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~----~ 263 (320)
T 3a99_A 195 GSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF----R 263 (320)
T ss_dssp TTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC----S
T ss_pred ccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc----c
Confidence 999876533 334567999999999886543 577899999999999999999995432 233333222 2
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..+++++.+||.+||..||.+|||+.++++||||++..
T Consensus 264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 46889999999999999999999999999999998753
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=364.24 Aligned_cols=260 Identities=23% Similarity=0.340 Sum_probs=191.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHH-HHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+..|+. +++.+ +||||+++++++...+..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceEE
Confidence 57999999999999999999999999999999987543 2334456667776 45555 69999999999999999999
Q ss_pred EEeccCCCChHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 175 AMELCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~---~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
||||+++ +|.+.+.. .....+++..+..++.|++.||.|||+. ||+||||||+|||++ .++.+||+|||++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGISG 174 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCSSSC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEccCCCce
Confidence 9999975 77766642 2356799999999999999999999999 999999999999998 57899999999998
Q ss_pred ccCCCCCcccccCCCcccCchhcc-----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCC-CCCCCCC
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNK-PDFRRKP 323 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~-~~~~~~~ 323 (562)
............||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.... +....+..+. +.+....
T Consensus 175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence 765544444558999999999983 34588999999999999999999999764321 2222222211 1222223
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 356899999999999999999999999999999998653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=352.70 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=206.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhh----HHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~----~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
..++|++.+.||+|+||.||+|.+..+++.||+|++.......... .+.+.+|+.+++.+ +||||+++++++.+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCC
Confidence 3468999999999999999999999999999999986544322222 16789999999999 599999999999776
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCC--CCCCeEEee
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK--EDSSLKATD 245 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~--~~~~vkl~D 245 (562)
. ++||||+++|+|.+.+... ...+++..+..++.||+.||.|||++| |+||||||+|||++..+ ....+||+|
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred C--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6 6999999999998887543 457999999999999999999999999 99999999999997421 122499999
Q ss_pred ccCccccCCCCCcccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhH--HHHHHhCCCCCC
Q 008547 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--FKEVLRNKPDFR 320 (562)
Q Consensus 246 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 320 (562)
||++..... ......||+.|+|||++.. .++.++|||||||++|+|++|+.||........ ...+..... .
T Consensus 173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~ 248 (287)
T 4f0f_A 173 FGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--R 248 (287)
T ss_dssp CTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--C
T ss_pred CCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--C
Confidence 999975432 3445689999999999843 347889999999999999999999977655443 333333322 2
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......+++++.+||.+||..||.+|||+.++++
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2233578999999999999999999999999975
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=357.65 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=205.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEE
Confidence 5799999999999999999999999999999999766544555668899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCcccccc
Confidence 9999999999988543 5799999999999999999999999999999999999998 4789999999998765433
Q ss_pred C--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 256 K--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||.+....... ..............+.+|+++.
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 266 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGIPVAFD 266 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-HHHHSCCCCGGGTSTTCCTHHH
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-HHhccCCCCccccCCCCCHHHH
Confidence 2 2235679999999998865 4588999999999999999999999877655333 3333333333334467899999
Q ss_pred HHHHHcCccCccCCC-CHHHHhc
Q 008547 333 DFVKKLLVKDPRARL-TAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rp-s~~~~l~ 354 (562)
++|.+||..||++|| ++.++++
T Consensus 267 ~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 267 AVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHhccCCHHHHHHhHHHHHH
Confidence 999999999999999 7777764
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=356.89 Aligned_cols=249 Identities=23% Similarity=0.365 Sum_probs=207.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|+||.||+|.+..+|+.||+|++... .....+.+.+|+.+++.+. ||||+++++++.+++..++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEEE
Confidence 5799999999999999999999999999999988543 3456788999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 86 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCCEEEeecccceecccc
Confidence 9999999999988543 46799999999999999999999999999999999999998 5788999999999765432
Q ss_pred CCc---------------ccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhh-----HHHHHHh
Q 008547 256 KKF---------------QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEVLR 314 (562)
Q Consensus 256 ~~~---------------~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~ 314 (562)
... ...+||+.|+|||++.+. ++.++||||||+++|+|++|..||....... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 156899999999998764 5889999999999999999999986543211 1111111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.. ..+.+++.+.+||.+||..||++|||+.++++ |++.
T Consensus 242 ~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~ 279 (310)
T 3s95_A 242 RY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLET 279 (310)
T ss_dssp HT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred cc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHH
Confidence 11 12467889999999999999999999999985 5443
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=367.08 Aligned_cols=253 Identities=18% Similarity=0.259 Sum_probs=205.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+..+|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.|.+||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 34689999999999999999999999999999999865432 2357889999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC--CCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE--DSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~--~~~vkl~DfG~a~~ 251 (562)
+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+. ...+||+|||++..
T Consensus 82 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999999 89999988543 467999999999999999999999999999999999999984211 12399999999986
Q ss_pred cCCCCC--------cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhh---HHHHHHhCCCCC
Q 008547 252 IKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDF 319 (562)
Q Consensus 252 ~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~ 319 (562)
...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+..... .+..+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 543221 2456899999999998764 5889999999999999999999998754433 333333222111
Q ss_pred CCC-CCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~-~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.. ....+| ++.+||..||..||.+||++.++++
T Consensus 240 ~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 240 PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 111 112344 8999999999999999999998875
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=352.74 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=217.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
...+|.+.+.||+|+||.||+|.+..++..||+|++.... ...+.+.+|+.+++.+. ||||+++++++.+.+.++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCEE
Confidence 4468999999999999999999999999999999987543 25677899999999995 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCccceecc
Confidence 999999999999999766667799999999999999999999999999999999999998 46789999999998765
Q ss_pred CCCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..... ......+++
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 239 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPEGCPE 239 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC---CCCCTTCCH
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC---CCCCCCCCH
Confidence 4332 234467889999998864 46889999999999999999 9999988888777776665432 222356899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.+||.+||..||.+|||+.++++
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHH
Confidence 9999999999999999999999964
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=352.04 Aligned_cols=248 Identities=29% Similarity=0.568 Sum_probs=199.3
Q ss_pred cccceeec-ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----
Q 008547 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (562)
Q Consensus 94 ~~~~y~i~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~---- 168 (562)
+..+|.+. +.||+|+||.||+|.+..+|+.||+|++... ..+.+|+.++.++.+||||+++++++..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 44567776 7899999999999999999999999998542 3467899998666679999999999886
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+++||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 77899999999999999999776666799999999999999999999999999999999999999644478999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh----CCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----NKPDFRRKPW 324 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~ 324 (562)
+..... ..++.++|||||||++|+|++|+.||.+.........+.. ....++...+
T Consensus 167 a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (299)
T 3m2w_A 167 AKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226 (299)
T ss_dssp CEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHH
T ss_pred cccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhc
Confidence 865431 2346789999999999999999999976654332211111 1111111122
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~ 369 (562)
..+++++.+||.+||..||.+|||+.++++||||+........+.
T Consensus 227 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~~ 271 (299)
T 3m2w_A 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271 (299)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCBC
T ss_pred ccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCCC
Confidence 468999999999999999999999999999999998765444443
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=348.72 Aligned_cols=251 Identities=27% Similarity=0.374 Sum_probs=200.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc-hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.+|.+.+.||+|+||.||+|.+. |+.||||++....... ....+.+.+|+.+++.+. ||||+++++++...+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceEE
Confidence 57999999999999999999864 8899999986543221 234577899999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCceEeccCC-----CCCCeEEeec
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAK-----EDSSLKATDF 246 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~NIll~~~~-----~~~~vkl~Df 246 (562)
||||+++++|.+.+ ....+++..++.++.||+.||.|||++| |+||||||+|||++... .++.+||+||
T Consensus 84 v~e~~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999998877 3457999999999999999999999999 99999999999998422 2678999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
|++........ ....||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+.........+........ ...
T Consensus 161 g~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 237 (271)
T 3dtc_A 161 GLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP--IPS 237 (271)
T ss_dssp CC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC--CCT
T ss_pred Ccccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC--CCc
Confidence 99986544332 345799999999988654 58899999999999999999999998887777766666543332 235
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+++.+.++|.+||..||.+|||+.+++++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 688999999999999999999999999864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=369.25 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=211.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.... .....+.+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEE
Confidence 357999999999999999999999999999999986442 234556788999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 190 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCEECTT
T ss_pred EEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEEECcCCCceecCC
Confidence 99999999999988543 34689999999999999999999999999999999999998 578999999999976543
Q ss_pred CCCc---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 255 GKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 255 ~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..+... +....+|+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 342 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL---PCPELCPD 342 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC---CCCTTCCH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence 2211 11235678999999864 45889999999999999998 99999888887776666554321 22245789
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+||.+||..||.+|||+.++++
T Consensus 343 ~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 343 AVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999999874
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=349.96 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=209.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.+. ||||+++++++.+.+.+++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEE
Confidence 458999999999999999999865 577899999976543 3467889999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEEECSTTGGGGBCC
T ss_pred EEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEEEccccccccccc
Confidence 99999999999988543 35699999999999999999999999999999999999998 578999999999986543
Q ss_pred CC--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
.. ......+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+........ ...+++.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 249 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEK 249 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHH
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCcCCHH
Confidence 22 1223456788999998864 56889999999999999998 9999998888888877776543322 2457899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcC
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+.+||.+||..||.+|||+.++++|
T Consensus 250 l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 250 VYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999864
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=355.51 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=214.3
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecC
Confidence 468999999999999999999873 456899999987543 345667899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKD----------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 227 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp 227 (562)
+..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp 178 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccch
Confidence 999999999999999998865432 3489999999999999999999999999999999
Q ss_pred CceEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCC
Q 008547 228 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWD 302 (562)
Q Consensus 228 ~NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~ 302 (562)
+|||++ .++.+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+
T Consensus 179 ~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 179 RNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp GGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred heEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999998 478899999999986644322 2334678899999988654 5889999999999999999 9999998
Q ss_pred CChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 303 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.........+...... .....+++.+.+||.+||..||.+||++.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 256 IPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp CCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8887777776655322 2235689999999999999999999999999863
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=362.18 Aligned_cols=255 Identities=25% Similarity=0.336 Sum_probs=211.1
Q ss_pred ccceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+.+.||+|+||.||+|.+ ..++..||||++.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 46899999999999999999987 3456789999987542 2234577899999999996699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 008547 170 NYVYIAMELCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 228 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~ 228 (562)
+.+++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~ 201 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 999999999999999998865432 23799999999999999999999999999999999
Q ss_pred ceEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCC
Q 008547 229 NFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDK 303 (562)
Q Consensus 229 NIll~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~ 303 (562)
|||++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.
T Consensus 202 NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 202 NVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99998 578999999999986643322 234567889999998754 56889999999999999998 99999888
Q ss_pred ChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCc
Q 008547 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356 (562)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp 356 (562)
........+........ ....+++++.+||.+||..||.+|||+.+++++.
T Consensus 279 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 279 PVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp CCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 76666666655543322 2246789999999999999999999999998754
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=355.64 Aligned_cols=253 Identities=26% Similarity=0.328 Sum_probs=213.2
Q ss_pred ccceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+.+.||+|+||.||+|.+ ..+++.||+|++.... .....+.+.+|+.+++++.+||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 35899999999999999999985 4577899999987543 2345678999999999996699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEec
Q 008547 170 NYVYIAMELCEGGELLDRILAKKD----------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 233 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~ 233 (562)
+..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence 999999999999999998865432 2489999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhH
Q 008547 234 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308 (562)
Q Consensus 234 ~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~ 308 (562)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+......
T Consensus 180 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 180 ---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp ---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred ---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 478999999999987654432 224467889999998755 46889999999999999998 9999988776655
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
........... .....+++.+.+||.+||..||.+|||+.++++
T Consensus 257 ~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 257 FYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp HHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccCCCC--CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 55554443222 223568899999999999999999999999985
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=351.27 Aligned_cols=254 Identities=27% Similarity=0.463 Sum_probs=201.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+.+++.+ +||||+++++++...+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEE
Confidence 35799999999999999999999999999999999765555556778899999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 175 AMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEeccceeee
Confidence 9999999999988753 2346799999999999999999999999999999999999998 4789999999999765
Q ss_pred CCCC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh--hhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+... ......+.... ++......++
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 264 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYS 264 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCCCCTTTSC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCCCcccccC
Confidence 4332 2334579999999998865 458899999999999999999999976532 23334443332 2223335689
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+||.+||..||.+|||+.++++
T Consensus 265 ~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 265 EELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999999975
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=361.64 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=213.4
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+.+.||+|+||.||+|.+. .+++.||||++.... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAVG 122 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccC
Confidence 468999999999999999999987 455899999987543 344567899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Q 008547 170 NYVYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 227 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp 227 (562)
+.+|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 202 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 202 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence 99999999999999999886532 15689999999999999999999999999999999
Q ss_pred CceEeccCCCCCCeEEeeccCccccCCC---CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCC
Q 008547 228 ENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWD 302 (562)
Q Consensus 228 ~NIll~~~~~~~~vkl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~ 302 (562)
+|||++ .++.+||+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+
T Consensus 203 ~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 203 RNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999998 4779999999999765332 12234578899999998764 56889999999999999999 9999999
Q ss_pred CChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 303 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....+....+..+.... ....+++.+.+||.+||..||.+|||+.++++
T Consensus 280 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 280 MAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 88888877776654321 22468899999999999999999999999975
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=356.00 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=209.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+.+|+.+++.+.+||||+.+++++......
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~ 81 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN 81 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence 35568999999999999999999999999999999986543 2245778999999997799999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--CCCCCeEEeeccCcc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDSSLKATDFGLSD 250 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~--~~~~~vkl~DfG~a~ 250 (562)
++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.. .....+||+|||++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 9999999 99999988543 3569999999999999999999999999999999999999842 123459999999998
Q ss_pred ccCCCCC--------cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCC---hhhHHHHHHhCCCC
Q 008547 251 FIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPD 318 (562)
Q Consensus 251 ~~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~ 318 (562)
....... .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.. ....+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7654322 3456799999999998764 5889999999999999999999998743 33333333322111
Q ss_pred C-CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 319 F-RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 319 ~-~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. .....+.+|+++.+||.+||..||.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 1 11112468899999999999999999999999874
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=357.61 Aligned_cols=261 Identities=21% Similarity=0.266 Sum_probs=215.1
Q ss_pred cccceeecceeeccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
..++|.+.+.||+|+||.||+|. +..++..||||++.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ 104 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcC
Confidence 45689999999999999999998 55678899999986432 344567889999999999 59999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
....|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++..+....+||
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999998865432 45899999999999999999999999999999999999986545668999
Q ss_pred eeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCC
Q 008547 244 TDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 244 ~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+......
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence 9999987543222 2234568999999998854 46889999999999999998 99999888877777777665422
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
...+.+++.+.+||.+||..||.+||++.+++++.|+-.
T Consensus 265 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 265 ---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 223568899999999999999999999999999988643
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=371.96 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=210.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-- 170 (562)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+. ||||+++++++...+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 82 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCC
Confidence 456789999999999999999999999999999999875432 224567789999999995 999999999998655
Q ss_pred eEEEEEeccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc-CCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~-~~~~~~vkl~DfG~ 248 (562)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+.. .+.++.+||+|||+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 7899999999999999885432 233999999999999999999999999999999999999821 12466799999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc---------CCCCCcchHHHHHHHHHHHhCCCCCCCC----ChhhHHHHHHhC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRN 315 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwslG~il~el~~g~~pf~~~----~~~~~~~~~~~~ 315 (562)
+............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||... ...+....+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 988766655667789999999998753 3477899999999999999999999643 334556666665
Q ss_pred CCCCCC-----------------CCC----CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 316 KPDFRR-----------------KPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 316 ~~~~~~-----------------~~~----~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+.... +.. ..+++.+.++|.+||..||++||++.++++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 432110 000 123457889999999999999999999754
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=348.27 Aligned_cols=249 Identities=23% Similarity=0.335 Sum_probs=200.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.++|++.+.||+|+||.||+|.+..+ +..||+|++.... .....+.+.+|+.+++.+ +||||+++++++. ++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCc
Confidence 46899999999999999999998654 4569999886542 344567899999999999 5999999999985 566
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRY 165 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC------
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECccccccc
Confidence 89999999999999988543 35699999999999999999999999999999999999998 468899999999987
Q ss_pred cCCCCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+...... +..+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~ 242 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNC 242 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCCCC
Confidence 654332 223456789999999864 46889999999999999996 99999988888888777665422 223578
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+.++|.+||..||.+|||+.++++
T Consensus 243 ~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 243 PPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999999999999874
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=351.81 Aligned_cols=251 Identities=26% Similarity=0.454 Sum_probs=212.9
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-- 168 (562)
+..+..+|++.+.||+|+||.||+|.+..+|+.||+|++.... ..+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 77 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDGFD 77 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEE
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEeccc
Confidence 3456678999999999999999999999999999999986543 2456899999999 59999999998864
Q ss_pred --------------CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 --------------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 --------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
...+++||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~- 156 (284)
T 2a19_B 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV- 156 (284)
T ss_dssp EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-
T ss_pred cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc-
Confidence 45689999999999999998766667899999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 313 (562)
.++.+||+|||++.............||+.|+|||++.+. ++.++||||||+++|+|++|..||... ......+.
T Consensus 157 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~ 232 (284)
T 2a19_B 157 --DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLR 232 (284)
T ss_dssp --ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHH
T ss_pred --CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhh
Confidence 4788999999999877665555567899999999998654 588999999999999999999987432 22333333
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
... ....+++.+.+||.+||..||.+|||+.++++++|.-.
T Consensus 233 ~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 233 DGI------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp TTC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ccc------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 221 11457899999999999999999999999999987654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=375.06 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=216.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
..+|.+.+.||+|+||.||+|.+..++..||||++..... ..+.+.+|+.+|+++ +||||+++++++.....+|+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEE
Confidence 4579999999999999999999999999999999875532 457789999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeecccceeccC
Confidence 99999999999999765556799999999999999999999999999999999999998 478999999999987643
Q ss_pred CCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....+|+.|+|||++.. .++.++|||||||+||||++ |..||.+.....+...+.... .......+++.
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 447 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY---RMERPEGCPEK 447 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC---CCCCCTTCCHH
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHH
Confidence 322 223456788999999864 46889999999999999999 999999888887777665543 22233568999
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+||.+||..||.+|||+.++++
T Consensus 448 l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 448 VYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCcChhHCcCHHHHHH
Confidence 999999999999999999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=371.34 Aligned_cols=260 Identities=28% Similarity=0.474 Sum_probs=199.9
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
...+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+++.+.+||||+++++++.+.+
T Consensus 10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~ 82 (434)
T 2rio_A 10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR 82 (434)
T ss_dssp SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence 34456678889999999999998653 578999999998643 23567899999998767999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCC-----CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC----------
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA---------- 235 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~---------- 235 (562)
.+|+||||+. |+|.+++....... .++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence 9999999995 69999885432111 1233457899999999999999999999999999999742
Q ss_pred CCCCCeEEeeccCccccCCCCC-----cccccCCCcccCchhccc--------CCCCCcchHHHHHHHHHHHh-CCCCCC
Q 008547 236 KEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFW 301 (562)
Q Consensus 236 ~~~~~vkl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~el~~-g~~pf~ 301 (562)
..+..+||+|||+|........ ....+||+.|+|||++.+ .++.++|||||||++|+|++ |..||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 2356899999999987654322 234689999999999854 45888999999999999999 999997
Q ss_pred CCChhhHHHHHHhCCCCCCCCC---CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 302 DKTEDGIFKEVLRNKPDFRRKP---WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
+..... ..+........... .+.+++++.+||.+||..||.+|||+.++++||||..
T Consensus 242 ~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 242 DKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp STTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred CchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 654432 34444443332211 1234578999999999999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=358.07 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=209.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEE--EEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~v--aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
++|.+.+.||+|+||.||+|.+..+|..+ |+|.+.... .....+.+.+|+.+++++.+||||+++++++.+.+.+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 57999999999999999999999888865 999886432 23345678899999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 174 IAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---CCC
Confidence 9999999999999885432 24799999999999999999999999999999999999998 467
Q ss_pred CeEEeeccCccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC
Q 008547 240 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
.+||+|||++.............+|+.|+|||++.+. ++.++|||||||++|+|++ |+.||.+....+....+.....
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 8999999999754433333445678899999998654 5889999999999999998 9999998888777776655432
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
......+++.+.+||.+||..||.+|||+.+++++
T Consensus 260 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 22234688999999999999999999999999864
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=356.81 Aligned_cols=250 Identities=22% Similarity=0.287 Sum_probs=202.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEE----EEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..+|++.+.||+|+||.||+|.+..+|+.+ |+|.+.... .......+.+|+.+++++ +||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC
Confidence 357999999999999999999998887754 777665332 233567899999999999 5999999999998765
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.++|++|+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAK 165 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHHH
T ss_pred -eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccCccee
Confidence 78899999999999988643 36799999999999999999999999999999999999998 47889999999998
Q ss_pred ccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 251 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 251 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+.........+...... ...+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 242 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPP 242 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCT
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC---CCCc
Confidence 7644332 223456889999998765 46889999999999999999 99999888877776666554322 2234
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.++..+.+++.+||..||.+||++.+++++
T Consensus 243 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 243 ICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp TBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 678999999999999999999999999864
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=354.52 Aligned_cols=259 Identities=20% Similarity=0.296 Sum_probs=217.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
...++|.+.+.||+|+||.||+|.+. .+++.||||++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVS 98 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEEC
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEc
Confidence 34568999999999999999999876 467889999987543 234556789999999999 5999999999999
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~---~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---CCC
Confidence 9999999999999999999885432 14578999999999999999999999999999999999998 478
Q ss_pred CeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHh
Q 008547 240 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 314 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~ 314 (562)
.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 255 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence 999999999976543221 223467899999999865 46889999999999999999 8999988888777777766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC------ccccc
Q 008547 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH------PWVRE 360 (562)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h------p~f~~ 360 (562)
.... .....+++.+.+||.+||..||.+|||+.+++++ +||++
T Consensus 256 ~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~ 304 (322)
T 1p4o_A 256 GGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304 (322)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred CCcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence 5432 1224688999999999999999999999999975 56654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=368.64 Aligned_cols=244 Identities=23% Similarity=0.340 Sum_probs=208.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-eEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVY 173 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-~~~ 173 (562)
.++|++.+.||+|+||.||+|.+. |+.||||++.... ..+.+.+|+.+++++ +||||+++++++.... .+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceE
Confidence 357999999999999999999764 7899999987543 346789999999999 5999999999987654 799
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCEEECCCTTCEECC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCEEEeeCCCccccc
Confidence 999999999999999766555689999999999999999999999999999999999998 57899999999998643
Q ss_pred CCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
... ....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+..+.. ....+.+|+++
T Consensus 341 ~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~p~~~~~~l 415 (450)
T 1k9a_A 341 STQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAV 415 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC---CCCCTTCCHHH
T ss_pred ccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHHH
Confidence 322 23367889999999865 46889999999999999998 9999998888888877766532 22335689999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+||.+||..||.+|||+.++++
T Consensus 416 ~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 416 YDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999999999874
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=351.18 Aligned_cols=250 Identities=15% Similarity=0.210 Sum_probs=204.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCC-------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~ 166 (562)
..++|.+.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+.+++.+. ||||+++++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~ 81 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLS-HKHLVLNYGVC 81 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSC-CTTBCCEEEEE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCC-CCCEeEEEEEE
Confidence 3468999999999999999999988877 469999986543 235678999999999995 99999999999
Q ss_pred EcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC-----CCCe
Q 008547 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-----DSSL 241 (562)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~-----~~~v 241 (562)
.+.+..++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.... .+.+
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999999988543 234899999999999999999999999999999999999985211 1129
Q ss_pred EEeeccCccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCC
Q 008547 242 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 319 (562)
||+|||++..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+...................
T Consensus 161 kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 4fvq_A 161 KLSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237 (289)
T ss_dssp EECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred eeccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC
Confidence 9999999875532 233468999999999864 46889999999999999999655555544444444444443332
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+ +..++++.+||.+||..||.+|||+.+++++
T Consensus 238 ~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 238 P----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp C----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred C----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 3457889999999999999999999999863
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=343.58 Aligned_cols=246 Identities=18% Similarity=0.204 Sum_probs=210.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC--CeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~--~~~~ 173 (562)
++|.+.+.||+|+||.||+|.+. |+.||||++..... .....+.+.+|+.+++.+ +||||+++++++.+. +..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeE
Confidence 47999999999999999999864 88999999876543 334567899999999999 599999999999877 7899
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+||||+++|+|.+++.......+++..+..++.||+.||.|||++| |+||||||+|||++ .++.++|+|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADVKFS 162 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTSCEEEEGGGSCCT
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCcceeEEeccceee
Confidence 9999999999999986655456999999999999999999999999 99999999999998 578899999998754
Q ss_pred cCCCCCcccccCCCcccCchhcccCC-C---CCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKS-G---PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~---~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
.. .....||+.|+|||++.+.. + .++|||||||++|+|++|+.||.+.........+........ ..+.+
T Consensus 163 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 236 (271)
T 3kmu_A 163 FQ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPPGI 236 (271)
T ss_dssp TS----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCTTC
T ss_pred ec----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCCCC
Confidence 32 23457899999999987542 2 379999999999999999999998888877777766543322 23568
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++++.++|.+||..||.+|||+.++++
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 237 SPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999999999974
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=350.60 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=200.4
Q ss_pred cccceeecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~- 168 (562)
..++|++.+.||+|+||.||+|. +..+|+.||||++.... ....+.+.+|+.+++.+. ||||+++++++..
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 83 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 83 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECHH
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 34689999999999999999998 56789999999986542 345678999999999995 9999999999864
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
...+++||||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg 159 (295)
T 3ugc_A 84 GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFG 159 (295)
T ss_dssp HHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCC
T ss_pred CCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEccCc
Confidence 456899999999999999885442 4589999999999999999999999999999999999998 46889999999
Q ss_pred CccccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh----------------
Q 008547 248 LSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---------------- 306 (562)
Q Consensus 248 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 306 (562)
++........ .....+|+.|+|||++.+ .++.++||||||+++|+|++|..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 9987644322 223457778999998865 4688999999999999999999998543211
Q ss_pred hHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 307 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.....+... . ..+....+++++.+||.+||..||.+|||+.++++
T Consensus 240 ~~~~~~~~~-~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 240 HLIELLKNN-G--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHTT-C--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcc-C--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 111222222 1 22223568999999999999999999999999974
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=357.50 Aligned_cols=258 Identities=27% Similarity=0.512 Sum_probs=203.4
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHcc---CCCCcceEEE
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA---GHENVVKFYN 164 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~~l~~l~---~hp~iv~l~~ 164 (562)
.+.+.++|++.+.||+|+||.||+|.+..+|+.||||++........ .....+.+|+.++.++. +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34566789999999999999999999999999999999865533211 12234567999999984 4999999999
Q ss_pred EEEcCCeEEEEEec-cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEE
Q 008547 165 AFEDDNYVYIAMEL-CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 243 (562)
Q Consensus 165 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl 243 (562)
++...+..++|+|+ +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEE
Confidence 99999999999999 7899999988543 56999999999999999999999999999999999999983 4678999
Q ss_pred eeccCccccCCCCCcccccCCCcccCchhcccCC--CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC
Q 008547 244 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321 (562)
Q Consensus 244 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 321 (562)
+|||++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||.... .+......+
T Consensus 182 ~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~-- 252 (312)
T 2iwi_A 182 IDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHF-- 252 (312)
T ss_dssp CCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCC--
T ss_pred EEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCC--
Confidence 999999876543 344567999999999886543 358999999999999999999995431 233333222
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
...+++.+.+||.+||..||++|||+.++++||||+....
T Consensus 253 --~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 253 --PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp --CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 2468899999999999999999999999999999997543
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=356.07 Aligned_cols=253 Identities=25% Similarity=0.330 Sum_probs=212.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCC-----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|.+.+.||+|+||.||+|.+..++. .||+|++.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 4589999999999999999999877665 79999986543 2345678999999999995599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 170 NYVYIAMELCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
+.+++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++ .
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---N 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE---G
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC---C
Confidence 99999999999999999886432 34689999999999999999999999999999999999998 4
Q ss_pred CCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHH
Q 008547 238 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~ 312 (562)
++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 279 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence 67899999999986543322 223467889999998765 46889999999999999998 99999887766666555
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
........ .....++.+.+||.+||..||.+|||+.++++
T Consensus 280 ~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 280 VKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 55443222 22457899999999999999999999999975
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=361.88 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=200.9
Q ss_pred ccceeecceeeccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..+|.+.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCc
Confidence 357999999999999999999876 467789999986542 344567899999999999 59999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 121 ~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLGRV 196 (373)
T ss_dssp CEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC-----
T ss_pred eEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---CCCCEEECcCccccc
Confidence 9999999999999998853 345799999999999999999999999999999999999998 578999999999987
Q ss_pred cCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 252 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 252 ~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
...... .....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||......+....+..... .+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~---~~~~~ 273 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR---LPPPM 273 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEE---CCCCT
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCc
Confidence 643321 112345778999998865 46889999999999999997 9999999888877777665432 22234
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.++..+.+||.+||..||.+||++.++++
T Consensus 274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 68899999999999999999999999874
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=371.68 Aligned_cols=256 Identities=25% Similarity=0.404 Sum_probs=197.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
.+|.+.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+.+|||||++++++.+...+|+|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3699999999999999764 3357899999999865432 22467999999996699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC--CCCCeEEeeccCccccC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLSDFIK 253 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~--~~~~vkl~DfG~a~~~~ 253 (562)
|||+. |+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++..+ ....+||+|||+|+...
T Consensus 97 ~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp EECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred EECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 99996 59998885433 3455666789999999999999999999999999999996422 23468899999998765
Q ss_pred CCC----CcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 254 PGK----KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 254 ~~~----~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
... .....+||+.|+|||++.+ .++.++|||||||++|+|++ |..||......... .+..........+.
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 253 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-ILLGACSLDCLHPE 253 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HHTTCCCCTTSCTT
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HHhccCCccccCcc
Confidence 432 2345689999999999863 34678999999999999999 99998655443322 22222111111112
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
...+..+.+||.+||+.||.+|||+.++++||||...
T Consensus 254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp CHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred ccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 2345668999999999999999999999999999753
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=358.06 Aligned_cols=249 Identities=21% Similarity=0.278 Sum_probs=204.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCE----EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.+|++.+.||+|+||.||+|.+..+|+. ||+|.+..... ......+.+|+.+++.+ +||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCc
Confidence 5799999999999999999999888876 67776643321 12234567899999999 5999999999886 456
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSSCEEECSCSGGGG
T ss_pred cEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCCeEEECCCCcccc
Confidence 89999999999999988543 35789999999999999999999999999999999999998 478899999999987
Q ss_pred cCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+.........+........ ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ---PQI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---CTT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---CCc
Confidence 654322 344578889999999864 56889999999999999999 9999988887777776665432222 234
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
++.++.+||.+||..||.+|||+.+++++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 67889999999999999999999999875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=370.44 Aligned_cols=248 Identities=24% Similarity=0.342 Sum_probs=211.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|.+.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+++.| +||||+++++++. .+.+|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM----SVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCE
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc----cHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccE
Confidence 3468999999999999999999875 467899999976432 467899999999999 5999999999986 56789
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIE 335 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCEEECSTTGGGGBC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcEEEeeCCCceEcC
Confidence 999999999999998655445689999999999999999999999999999999999998 57899999999998764
Q ss_pred CCCC--cccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+....++...+..+.. .+....+++
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~ 412 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPENCPE 412 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC---CCCCTTSCH
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCH
Confidence 3211 12345678899999986 456889999999999999999 9999999888888887776532 222356899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+||.+||..||.+|||+.+++.
T Consensus 413 ~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 413 ELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHHH
Confidence 9999999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=352.68 Aligned_cols=254 Identities=25% Similarity=0.322 Sum_probs=208.9
Q ss_pred ccceeecceeeccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
.++|++.+.||+|+||.||+|.+ ..+++.||||++.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 45899999999999999999985 4567899999987543 2345567899999999997799999999998765
Q ss_pred C-eEEEEEeccCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 170 N-YVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 170 ~-~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
+ .+++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~- 182 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 182 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC-
Confidence 4 59999999999999998854432 1288999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.......
T Consensus 183 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 260 (316)
T 2xir_A 183 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260 (316)
T ss_dssp --GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred --CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence 467899999999986644322 234567899999998865 45889999999999999998 99999877655444
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
........... ....+++.+.++|.+||..||.+|||+.++++|
T Consensus 261 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 261 CRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhccCccCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 44333322222 224578999999999999999999999999864
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=341.02 Aligned_cols=246 Identities=22% Similarity=0.369 Sum_probs=210.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEE
Confidence 47999999999999999999976 677899999976543 346789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp ECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEcccccccccccc
Confidence 9999999999988543 35689999999999999999999999999999999999998 4678999999999865432
Q ss_pred C--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 K--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
. ......+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||......+....+........ ...+++.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l 234 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV 234 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC---CccCcHHH
Confidence 1 1223467889999999864 45889999999999999999 8999998888888777766543222 24578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+||..||.+|||+.++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHH
Confidence 99999999999999999999975
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=346.35 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=196.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+...++|++.+.||+|+||.||+|.+. ..||+|++..... .....+.+.+|+.+++.+. ||||+++++++ ....
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~~ 93 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAPQ 93 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSSS
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCCc
Confidence 445578999999999999999999753 3599999865532 3456678999999999995 99999999965 5566
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+++++|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 94 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATE 169 (289)
T ss_dssp CEEEEECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC----
T ss_pred cEEEEEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceeccc
Confidence 8999999999999888743 345699999999999999999999999999999999999998 478999999999976
Q ss_pred cCC---CCCcccccCCCcccCchhcc----cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH-hCCCCCC-CC
Q 008547 252 IKP---GKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL-RNKPDFR-RK 322 (562)
Q Consensus 252 ~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~-~~ 322 (562)
... ........||+.|+|||++. ..++.++||||||+++|+|++|+.||.+........... ....... ..
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence 532 22234567999999999885 234678999999999999999999998866555444443 3332221 12
Q ss_pred CCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 323 ~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....+|+.+.+||.+||..||.+|||+.++++
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 23468899999999999999999999999975
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=356.10 Aligned_cols=246 Identities=23% Similarity=0.294 Sum_probs=195.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC----e
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----Y 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~----~ 171 (562)
.+|++.+.||+|+||.||+|.+. ++.||||++.... .......+|+.+++.+ +||||+++++++.... .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCce
Confidence 47999999999999999999764 7899999986542 2445566799999999 4999999999998643 4
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc----------CceeccCCCCceEeccCCCCCCe
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH----------GLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~----------~iiHrDlkp~NIll~~~~~~~~v 241 (562)
+++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+
T Consensus 97 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~---~~~~~ 170 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTA 170 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC---TTCCE
T ss_pred EEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC---CCCeE
Confidence 7999999999999998844 3589999999999999999999999 999999999999998 57899
Q ss_pred EEeeccCccccCCCCC---cccccCCCcccCchhcccC------CCCCcchHHHHHHHHHHHhCCCCCCCCCh-------
Q 008547 242 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTE------- 305 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~DiwslG~il~el~~g~~pf~~~~~------- 305 (562)
||+|||+|+....... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+...
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999976544322 3346899999999998752 35678999999999999999999965432
Q ss_pred ---------hhHHHHHHhCCCCCCCC-CCC--CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 306 ---------DGIFKEVLRNKPDFRRK-PWP--SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 306 ---------~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
......+.......... .|+ ..++++.+||.+||..||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11222222221111100 011 12345999999999999999999999974
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=346.35 Aligned_cols=251 Identities=25% Similarity=0.338 Sum_probs=202.7
Q ss_pred ccceeecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC-
Q 008547 95 DRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD- 169 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~- 169 (562)
.++|++.+.||+|+||.||+|. +..+|+.||+|++..... ....+.+.+|+.+++.+. ||||+++++++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLY-HENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCC
Confidence 4579999999999999999998 567899999999875432 234577899999999995 99999999999876
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
..+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGL 172 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTT
T ss_pred CceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc---CCCCEEECcccc
Confidence 6789999999999999988544 35699999999999999999999999999999999999998 467999999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCC--------------ChhhHH
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK--------------TEDGIF 309 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~--------------~~~~~~ 309 (562)
+........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..|+... ......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987654432 234568889999998865 4578899999999999999999886321 111112
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
........ .....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 253 ~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 253 VNTLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 22222222 22233578999999999999999999999999975
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=348.37 Aligned_cols=253 Identities=20% Similarity=0.290 Sum_probs=203.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcc-eEEEEEEcCCeE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV-KFYNAFEDDNYV 172 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv-~l~~~~~~~~~~ 172 (562)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.+. |++++ .+..++......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHT-TSTTCCCEEEEEEETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhh-cCCCCCccccccCCCCce
Confidence 45789999999999999999999999999999999865432 235789999999996 65554 454455778889
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+ +++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++...
T Consensus 81 ~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEEEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9999999 8999998853 3457999999999999999999999999999999999999953335788999999999876
Q ss_pred CCCCC--------cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCCh---hhHHHHHHhCCCCCC
Q 008547 253 KPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFR 320 (562)
Q Consensus 253 ~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~~~~~~~~~~ 320 (562)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ...+..+.......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 54322 245689999999999876 458899999999999999999999976432 233333332211111
Q ss_pred -CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 321 -RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 321 -~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 1112467899999999999999999999999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=347.41 Aligned_cols=252 Identities=19% Similarity=0.275 Sum_probs=202.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC-
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN- 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~- 170 (562)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++..... .....+.+.+|+.+++.+. ||||+++++++...+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeeccc
Confidence 3589999999999999999998765 556899999875532 3345678899999999995 999999999998655
Q ss_pred ----eEEEEEeccCCCChHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 171 ----YVYIAMELCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 ----~~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
..++||||+++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---TTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEE
Confidence 459999999999999988542 335699999999999999999999999999999999999998 478999
Q ss_pred EeeccCccccCCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCC
Q 008547 243 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 243 l~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~ 317 (562)
|+|||++........ .....+++.|+|||++.+. ++.++||||||+++|+|++ |..||.+.........+.....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 267 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR 267 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC
Confidence 999999986643321 2234678899999998654 5889999999999999999 9999998888888877766542
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus 268 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 268 L---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp C---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred C---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 2 223568899999999999999999999999985
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=343.42 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=209.9
Q ss_pred cceeecc-eeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGK-LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~-~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|.+.+ .||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++. .+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQ-AEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhC-CCCCEeEEEEEec-CCCc
Confidence 4677766 9999999999999854 467889999987642 345677899999999999 5999999999994 5568
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccceeee
Confidence 999999999999988743 345699999999999999999999999999999999999998 4789999999999876
Q ss_pred CCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||......+....+..+... ...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~ 237 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 237 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTT
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC---CCCCC
Confidence 44322 123456889999999864 45889999999999999998 99999888887777777665422 22357
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
+++++.++|.+||..||.+||++.+++++.+
T Consensus 238 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 238 CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 8999999999999999999999999987543
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=361.56 Aligned_cols=247 Identities=16% Similarity=0.228 Sum_probs=200.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC--------CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcce-----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN--------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK----- 161 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~----- 161 (562)
.++|.+.+.||+|+||.||+|.+..+ ++.||||++... ..+.+|+.+++.+. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 46899999999999999999998874 889999998654 34778999999995 999887
Q ss_pred ----------EEEEEEc-CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 008547 162 ----------FYNAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 230 (562)
Q Consensus 162 ----------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NI 230 (562)
+++++.. +...|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777765 78899999999 99999999765457799999999999999999999999999999999999
Q ss_pred EeccCCCCC--CeEEeeccCccccCCCC--------CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCC
Q 008547 231 LFKSAKEDS--SLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP 299 (562)
Q Consensus 231 ll~~~~~~~--~vkl~DfG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~p 299 (562)
|++. ++ .+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.|
T Consensus 191 l~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 191 FVDP---EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp EEET---TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred EEcC---CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9983 55 89999999997654321 1234589999999999876 468899999999999999999999
Q ss_pred CCCCC--hhhHHHH---HHhCCCCCCC--CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 300 FWDKT--EDGIFKE---VLRNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 300 f~~~~--~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
|.... ...+... +......+.. ..+..+++++.+||.+||..||.+|||+.++++
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 97754 2222222 2222222211 123457899999999999999999999999975
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=356.51 Aligned_cols=257 Identities=22% Similarity=0.316 Sum_probs=205.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
....++|.+.+.||+|+||.||+|.+ .+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES---SQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTC
T ss_pred HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCe
Confidence 44567899999999999999999985 468999999886543 23567889999999999 49999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 172 VYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
.++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---TTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---CCCCEEEeecccc
Confidence 999999999999998874332 23589999999999999999999999999999999999998 5789999999999
Q ss_pred cccCCC---CCcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHH------HHH-hCCC-
Q 008547 250 DFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK------EVL-RNKP- 317 (562)
Q Consensus 250 ~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~------~~~-~~~~- 317 (562)
...... .......||+.|+|||++. +.++.++|||||||++|+|++|+.||.......... ... ....
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 764322 2223456899999999875 456899999999999999999999997654322111 111 1100
Q ss_pred -----CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCc
Q 008547 318 -----DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356 (562)
Q Consensus 318 -----~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp 356 (562)
.......+..+..+.+++.+||..||++|||+.+++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 001111122456789999999999999999999998653
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=340.83 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=206.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++.++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSS-S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC-C
Confidence 3579999999999999999998654 34469999987653 234567899999999999 599999999998754 4
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFGLSRY 162 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCCGGGC
T ss_pred CEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccCCCcc
Confidence 68999999999999988543 35689999999999999999999999999999999999998 477999999999987
Q ss_pred cCCCCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
...... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+...... +....+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 239 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---PKPDLC 239 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCC---CCCTTC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCC---CCCCCC
Confidence 644322 234467889999999864 46889999999999999998 99999888877777776665322 122458
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+.++|.+||..||.+|||+.++++
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 240 PPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 899999999999999999999999975
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=350.08 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=203.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEE----EEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..+|++.+.||+|+||.||+|.+..+++.| |+|.+.... .......+.+|+.+++.+ +||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC
Confidence 357999999999999999999998888765 666554322 233567889999999999 5999999999998765
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.++|++|+.+|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAK 165 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTC--
T ss_pred -ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc---CCCCEEEccCccee
Confidence 78899999999999988643 35799999999999999999999999999999999999998 47889999999998
Q ss_pred ccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 251 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 251 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+...... +..+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 242 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPP 242 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCT
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCc
Confidence 7643322 223456889999998865 45889999999999999999 99999888887777766655422 2234
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.++.++.+||.+||..||.+||++.++++
T Consensus 243 ~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 243 ICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 68899999999999999999999999985
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=340.96 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=208.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.+ +||||+++++++.. +..++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhC-CCcCcceEEEEEcC-CCcEE
Confidence 468999999999999999999865 567899999875432 356789999999999 59999999998874 45899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCcccccccC
Confidence 99999999999988543334699999999999999999999999999999999999998 578999999999987654
Q ss_pred CCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 255 GKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 255 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||.+....+....+...... .....++++
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 238 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPEE 238 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCcccccHH
Confidence 322 223457889999999864 45889999999999999999 99999988887777777655322 223468899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+.+||.+||..||++|||+.++++
T Consensus 239 l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 239 LYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhccChhhCCCHHHHHH
Confidence 999999999999999999999875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=365.29 Aligned_cols=255 Identities=25% Similarity=0.349 Sum_probs=210.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.+++.|. ||||+++++++.. +.+|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-CceE
Confidence 34679999999999999999999765 45799999876542 3467899999999994 9999999999876 6789
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceecC
Confidence 999999999999998654456799999999999999999999999999999999999998 46789999999998764
Q ss_pred CCCC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.... .....+|+.|+|||++.. .++.++|||||||++|||++ |+.||.+....++...+..+.. .+..+.+|+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~ 408 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPECPE 408 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTTSCH
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCH
Confidence 3221 223456789999998764 56889999999999999999 9999999888888877766532 222356899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc--Ccccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~--hp~f~~~ 361 (562)
.+.+||.+||..||++|||+.++++ ..++...
T Consensus 409 ~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 409 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 9999999999999999999999986 3555543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=343.62 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=206.2
Q ss_pred cceeecc-eeeccCCeEEEEEE--EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGK-LLGHGQFGYTYVAT--DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~-~lG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+|.+.+ .||+|+||.||+|. ...+++.||||++..... .....+.+.+|+.+++.+ +||||+++++++ ..+..
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCc
Confidence 4799988 99999999999995 456788999999875532 234567899999999999 599999999999 56678
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC---CCcEEEccCCcceee
Confidence 999999999999998854 456999999999999999999999999999999999999984 678999999999876
Q ss_pred CCCCCc----ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||.+.........+...... ...+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 244 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAG 244 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTT
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCC
Confidence 543322 22356788999999865 45789999999999999999 99999988887777766654321 22356
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++.+.++|.+||..||.+||++.++++
T Consensus 245 ~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 245 CPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8999999999999999999999999874
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=360.86 Aligned_cols=258 Identities=18% Similarity=0.233 Sum_probs=195.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCC-----CCEEEEEEecccccCchh--------hHHHHHHHHHHHHHccCCCCc
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPI--------AVEDVKREVKILQALAGHENV 159 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~~hp~i 159 (562)
...++|++.+.||+|+||.||+|.+..+ ++.||||++......... ....+..|+..++.+ +||||
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~i 110 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGV 110 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCS
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCC
Confidence 3456899999999999999999998765 578999998654310000 011223344455555 49999
Q ss_pred ceEEEEEEcC----CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC
Q 008547 160 VKFYNAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235 (562)
Q Consensus 160 v~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~ 235 (562)
+++++++... ...||||||+ |++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~- 187 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY- 187 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-
T ss_pred CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-
Confidence 9999998764 5689999999 9999988754 3467999999999999999999999999999999999999983
Q ss_pred CCCCCeEEeeccCccccCCCCC--------cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh
Q 008547 236 KEDSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED 306 (562)
Q Consensus 236 ~~~~~vkl~DfG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~ 306 (562)
..++.+||+|||+|+....... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 2368999999999976543211 1345699999999998764 688999999999999999999999764333
Q ss_pred hHHHHHHh-----CCCCCCC--CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 307 GIFKEVLR-----NKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 307 ~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
........ ....+.. .....+|+++.+||..||..||.+||++.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 22211111 0000000 011467899999999999999999999999875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=361.49 Aligned_cols=257 Identities=21% Similarity=0.230 Sum_probs=195.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcC---CCCEEEEEEecccccCch--------hhHHHHHHHHHHHHHccCCCCcce
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILP--------IAVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~--------~~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
...++|.+.+.||+|+||.||+|.+.. ++..||||++........ .....+.+|+.+++.+ +||||++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~ 112 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPL 112 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCC
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcce
Confidence 345689999999999999999999987 788999999875432100 1123466788888888 5999999
Q ss_pred EEEEEEc----CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCC
Q 008547 162 FYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 162 l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~ 237 (562)
+++++.. ...+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. .
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~ 188 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-N 188 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-S
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-C
Confidence 9999987 78899999999 99999987433 479999999999999999999999999999999999999842 2
Q ss_pred CCCeEEeeccCccccCCCC--------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh--
Q 008547 238 DSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED-- 306 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~-- 306 (562)
.+.+||+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 2499999999997653221 12456899999999998765 588999999999999999999999653222
Q ss_pred hHHHH---HHhCCCCCCC--CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 307 GIFKE---VLRNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 307 ~~~~~---~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..... .....+.... .+...+++++.+||.+||..||.+||++.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 11111 1111110000 011268899999999999999999999999875
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=351.25 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=203.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE----cCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~----~~~~ 171 (562)
++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.+ +||||+++++++. ....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCce
Confidence 5799999999999999999999999999999988653 234667889999999999 5999999999987 3457
Q ss_pred EEEEEeccCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 172 VYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
.++||||+++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCCEEEEecCcc
Confidence 89999999999999988543 346799999999999999999999999999999999999998 4788999999998
Q ss_pred cccCCCCC----------cccccCCCcccCchhcccC----CCCCcchHHHHHHHHHHHhCCCCCCCCC--hhhHHHHHH
Q 008547 250 DFIKPGKK----------FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVL 313 (562)
Q Consensus 250 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~~~ 313 (562)
........ .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~- 260 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV- 260 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-
Confidence 75432111 1234679999999998643 4789999999999999999999995421 11222222
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.... ..+..+.+++++.+||.+||..||.+|||+.+++++
T Consensus 261 ~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 261 QNQL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hccC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 2222 222335689999999999999999999999999974
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=348.48 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=205.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
..+|.+.+.||+|+||.||+|.+..++ ..||||++.... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYK 119 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCC
Confidence 458999999999999999999876553 359999986543 234566789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..++||||+++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSR 195 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC--
T ss_pred CcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECCCCcch
Confidence 99999999999999988754 346799999999999999999999999999999999999998 57899999999998
Q ss_pred ccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 251 FIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 251 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....++...+..+.. .+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~---~~~~ 272 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LPTP 272 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc---CCCc
Confidence 7643221 122356788999999865 46889999999999999998 9999998888877777765432 1223
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+++.+.++|.+||..||.+||++.++++
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 468899999999999999999999999875
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=347.75 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=198.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcc-eEEEEEEcCCe
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV-KFYNAFEDDNY 171 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv-~l~~~~~~~~~ 171 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.+. |++++ .+..++...+.
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~ 79 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDY 79 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHT-TSTTCCCEEEEEEETTE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhc-CCCCCCeeeeecCCCCc
Confidence 355789999999999999999999999999999998755432 234778999999996 55554 45555578889
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+ +++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|||++..
T Consensus 80 ~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEEEECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred eEEEEEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99999999 8999988753 345799999999999999999999999999999999999994323578899999999987
Q ss_pred cCCCCC--------cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---hHHHHHHhCCCCC
Q 008547 252 IKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPDF 319 (562)
Q Consensus 252 ~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~ 319 (562)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... ..+..+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 644322 235689999999999876 4588999999999999999999999764332 2333332221111
Q ss_pred C-CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 R-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~-~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+ ......+|+++.+||.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 1 1112457899999999999999999999999975
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-43 Score=347.45 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=196.3
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHH--ccCCCCcceEEEEEEc-
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA--LAGHENVVKFYNAFED- 168 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~hp~iv~l~~~~~~- 168 (562)
..+.++|++.+.||+|+||.||+|.+ +|+.||||++... ....+.+|.+++.. + +||||+++++++..
T Consensus 4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~ 74 (301)
T 3q4u_A 4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVML-RHENILGFIASDMTS 74 (301)
T ss_dssp CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEE
T ss_pred ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhc-cCcCeeeEEEeeccc
Confidence 34567899999999999999999976 6899999998643 34556678888777 5 69999999998653
Q ss_pred ---CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HcCceeccCCCCceEeccCCC
Q 008547 169 ---DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHRDMKPENFLFKSAKE 237 (562)
Q Consensus 169 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH--------~~~iiHrDlkp~NIll~~~~~ 237 (562)
...+++||||+++|+|.+++ ....+++..+..++.||+.||.||| +.||+||||||+|||++ .
T Consensus 75 ~~~~~~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~ 148 (301)
T 3q4u_A 75 RHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---K 148 (301)
T ss_dssp ETTEEEEEEEECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---T
T ss_pred cCCCceeEEehhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---C
Confidence 45689999999999999988 3357999999999999999999999 99999999999999998 4
Q ss_pred CCCeEEeeccCccccCCCCC-----cccccCCCcccCchhcccCC-------CCCcchHHHHHHHHHHHhC---------
Q 008547 238 DSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCG--------- 296 (562)
Q Consensus 238 ~~~vkl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-------~~~~DiwslG~il~el~~g--------- 296 (562)
++.+||+|||+|........ ....+||+.|+|||++.+.. +.++|||||||++|+|++|
T Consensus 149 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~ 228 (301)
T 3q4u_A 149 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228 (301)
T ss_dssp TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccc
Confidence 78999999999976543322 23458999999999987642 3689999999999999999
Q ss_pred -CCCCCCCCh----hhHHHHHHhCCCCCCCCCC----CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 297 -RRPFWDKTE----DGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 297 -~~pf~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..||..... ..............+..+. ...++++.+||.+||..||.+|||+.++++
T Consensus 229 ~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 889865422 2233333322211111110 114467999999999999999999999975
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=351.28 Aligned_cols=249 Identities=24% Similarity=0.449 Sum_probs=187.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-------- 167 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~-------- 167 (562)
.+|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+++.+.+||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 47999999999999999999999999999999985542 3456778999999999977999999999984
Q ss_pred cCCeEEEEEeccCCCChHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEe
Q 008547 168 DDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
....+++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.| |+||||||+|||++ .++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~---~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS---NQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC---TTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC---CCCCEEEe
Confidence 4456899999995 699888754 23457999999999999999999999999 99999999999998 47799999
Q ss_pred eccCccccCCCCCc-------------ccccCCCcccCchhcc---c-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhh
Q 008547 245 DFGLSDFIKPGKKF-------------QDIVGSAYYVAPEVLK---R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 307 (562)
Q Consensus 245 DfG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~---~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 307 (562)
|||++......... ...+||+.|+|||++. + .++.++|||||||++|+|++|+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 99999876443221 1456999999999973 2 34778999999999999999999997655443
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
.... .. ........+..+.+||.+||..||.+|||+.+++++-+
T Consensus 261 ~~~~----~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 261 IVNG----KY--SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------C--CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhcC----cc--cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 3222 11 12223456788999999999999999999999998643
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=343.54 Aligned_cols=252 Identities=22% Similarity=0.341 Sum_probs=202.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.++|++.+.||+|+||.||+|.+.. ++. .||||++...........+.+.+|+.+++.+ +||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-
Confidence 3579999999999999999998643 333 6899998765444445678899999999999 5999999999998765
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++|+||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRA 170 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEE
T ss_pred ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc---CCCCEEEcccccccc
Confidence 88999999999999988654 35689999999999999999999999999999999999998 467899999999987
Q ss_pred cCCCCC----cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 252 IKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 252 ~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
...... .....+|+.|+|||++.+. ++.++||||||+++|+|++ |+.||.+....+....+.......+ ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 248 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPE 248 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCT
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC--CCc
Confidence 654332 2234678899999998654 5789999999999999999 9999999888888887776544332 235
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++++.++|.+||..||.+|||+.++++
T Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 249 DCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 68999999999999999999999999985
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=348.63 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=205.2
Q ss_pred cceeecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE--cC
Q 008547 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DD 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~--~~ 169 (562)
++|++.+.||+|+||.||+|. +..+++.||||++.... ....+.+.+|+.+++.+ +||||+++++++. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCC
Confidence 479999999999999999998 56789999999987543 34567789999999999 5999999999886 56
Q ss_pred CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCc
Q 008547 170 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a 249 (562)
..+++||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLA 174 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCGGGC
T ss_pred ceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC---CCCCEEEcccccc
Confidence 67999999999999999885433 4689999999999999999999999999999999999998 4788999999999
Q ss_pred cccCCCCC----cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh--------------hHHH
Q 008547 250 DFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED--------------GIFK 310 (562)
Q Consensus 250 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------~~~~ 310 (562)
........ .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||...... ....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 87654332 2345688899999988654 488999999999999999999998543321 1112
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....... .....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 255 ~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 255 ELLEEGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhhccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 2222222 22223578999999999999999999999999964
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=341.23 Aligned_cols=243 Identities=22% Similarity=0.332 Sum_probs=199.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~~~l 174 (562)
++|++.+.||+|+||.||+|.+ +|+.||+|++.... ..+.+.+|+.+++.+ +||||+++++++.. .+.+++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEE
Confidence 5799999999999999999976 48899999986543 456788999999999 49999999998754 457899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeeccccccccc
Confidence 99999999999988655434489999999999999999999999999999999999998 478999999999876543
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. .....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+.... .......+++.+.
T Consensus 170 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~ 244 (278)
T 1byg_A 170 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPPAVY 244 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC---CCCCCTTCCHHHH
T ss_pred c--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---CCCCcccCCHHHH
Confidence 2 223467899999999865 46889999999999999998 999998888777777765543 2223356899999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++|.+||..||.+|||+.++++
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcCChhhCCCHHHHHH
Confidence 9999999999999999999874
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-44 Score=383.14 Aligned_cols=263 Identities=24% Similarity=0.393 Sum_probs=211.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc------C
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------~ 169 (562)
++|++.+.||.|+||.||+|.+..+|+.||||++.... .....+.+.+|+.+++.+ +||||+++++++.. +
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCC
Confidence 58999999999999999999999999999999986542 345667899999999999 59999999998765 7
Q ss_pred CeEEEEEeccCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
+..|+||||++||+|.+++.... ...+++..++.++.||+.||.|||+.||+||||||+|||++..+....+||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999885432 23689999999999999999999999999999999999999644445699999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHH---------H-----H
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE---------V-----L 313 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---------~-----~ 313 (562)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......... + .
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 988776666667789999999999865 568899999999999999999999976533211100 0 0
Q ss_pred hCCCCCCC------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 314 RNKPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 314 ~~~~~~~~------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+...+.. ...+.+++.+.+||.+||.+||++|||+.++++||||+..
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 11111111 1112356889999999999999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=340.06 Aligned_cols=249 Identities=22% Similarity=0.261 Sum_probs=205.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEE-EcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-EDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~-~~~~~ 171 (562)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+.+++++ +||||+++++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCc
Confidence 46999999999999999999865443 358999886532 344567899999999999 499999999985 45678
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 102 ~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARD 177 (298)
T ss_dssp CEEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSCGGGCC
T ss_pred eEEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCCCEEECccccccc
Confidence 8999999999999998853 345689999999999999999999999999999999999998 578999999999986
Q ss_pred cCCCC-----CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 252 IKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 252 ~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
..... ......+|+.|+|||++.+ .++.++||||||+++|+|++ |.+||.+.........+........ .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 254 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---P 254 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC---C
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC---C
Confidence 54322 1234567889999998865 45889999999999999999 6777777777777777766554332 2
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+++.+.++|.+||..||.+|||+.++++
T Consensus 255 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 255 EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 457899999999999999999999999975
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=337.79 Aligned_cols=248 Identities=22% Similarity=0.268 Sum_probs=204.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE-
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV- 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~- 172 (562)
.|.+.+.||+|+||.||+|.+..++. .||+|++.... .....+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCc
Confidence 57888999999999999998766554 79999986532 344667889999999999 599999999999866655
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+.+|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 99 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLARDI 174 (298)
T ss_dssp EEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECCTTSSCTT
T ss_pred EEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEeCcCCCcccc
Confidence 999999999999998853 346789999999999999999999999999999999999998 5789999999999765
Q ss_pred CCC-----CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCC-CCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 253 KPG-----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 253 ~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
... .......+|+.|+|||.+.+ .++.++||||||+++|+|++|. +||...........+...... ....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 251 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL---PQPE 251 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC---CCCT
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC---CCCc
Confidence 432 22234567899999999876 4588999999999999999954 555555555665555554322 1224
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+++.+.+||.+||..||.+|||+.++++
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 57899999999999999999999999875
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=345.16 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=203.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
|..++.||+|+||.||+|.+ +++.||+|++..... ......+.+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEEE
Confidence 55668999999999999974 688999999865432 2234567899999999999 5999999999999999999999
Q ss_pred eccCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 177 ELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 177 e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASEKF 186 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECCSC
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcEEEeecccccccccc
Confidence 999999999988543 345699999999999999999999999999999999999998 5789999999999765432
Q ss_pred CC---cccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHH----HHHHhCCCCC-------CC
Q 008547 256 KK---FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF----KEVLRNKPDF-------RR 321 (562)
Q Consensus 256 ~~---~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~~-------~~ 321 (562)
.. .....||+.|+|||++.+.++.++||||||+++|+|++|..||......... ..+......+ ..
T Consensus 187 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
T 2nru_A 187 AQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN 266 (307)
T ss_dssp SSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred cccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 21 2345799999999999888899999999999999999999999765543322 2222111100 00
Q ss_pred CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 322 ~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...+..++.+.+++.+||..||.+|||+.++++
T Consensus 267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 111224567899999999999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=348.96 Aligned_cols=259 Identities=19% Similarity=0.256 Sum_probs=203.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
....++|.+.+.||+|+||.||+|.+ .+|+.||||++...... .....+.+|+.+++.+. ||||+++++++...+.
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 101 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTE 101 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEECCSSC
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhcc-CCCccceEEEEecCCc
Confidence 34567899999999999999999974 46899999998754321 12236889999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCceEeccCCCCCCeEEeec
Q 008547 172 VYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
.++||||+++|+|.+.+.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++ .++.+||+||
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~---~~~~~kl~Df 178 (326)
T 3uim_A 102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDF 178 (326)
T ss_dssp CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC---TTCCEEECCC
T ss_pred eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC---CCCCEEeccC
Confidence 999999999999999886543 23499999999999999999999999 999999999999998 5789999999
Q ss_pred cCccccCCCC--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCC----CChhhHHHHHHhCCCCC
Q 008547 247 GLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD----KTEDGIFKEVLRNKPDF 319 (562)
Q Consensus 247 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~----~~~~~~~~~~~~~~~~~ 319 (562)
|++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.. .................
T Consensus 179 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T 3uim_A 179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258 (326)
T ss_dssp SSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS
T ss_pred ccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc
Confidence 9998764322 2344569999999998854 458899999999999999999999952 11111112222111100
Q ss_pred ---C--------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcc
Q 008547 320 ---R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357 (562)
Q Consensus 320 ---~--------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~ 357 (562)
. ....+..++.+.+++.+||..||.+|||+.++++|-.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 0 0001112367899999999999999999999998755
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=345.30 Aligned_cols=250 Identities=27% Similarity=0.358 Sum_probs=202.0
Q ss_pred cccce-eecceeeccCCeEEEEEEE----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 94 FDRRY-TIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 94 ~~~~y-~i~~~lG~G~~g~Vy~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
+..+| ++++.||+|+||.||++.. ..+|+.||||++.... .....+.+.+|+.+++.+. ||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence 44556 9999999999999988753 4578899999997553 3456678999999999995 9999999999987
Q ss_pred --CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 169 --DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 169 --~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
...+++||||+++|+|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~---~~~~~kl~Df 178 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDF 178 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCG
T ss_pred CCCceEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc---CCCCEEECCc
Confidence 4689999999999999998733 3589999999999999999999999999999999999998 5789999999
Q ss_pred cCccccCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh--------------h
Q 008547 247 GLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--------------G 307 (562)
Q Consensus 247 G~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------~ 307 (562)
|++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .
T Consensus 179 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 3lxp_A 179 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258 (318)
T ss_dssp GGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH
T ss_pred cccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH
Confidence 99987654432 234568889999999865 4578999999999999999999998653221 0
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.......... .......+++++.+||.+||..||.+|||+.++++
T Consensus 259 ~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 259 RLTELLERGE--RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHhccc--CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1112222222 22223568999999999999999999999999973
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=353.45 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=198.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEE-cCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~-~~~~ 171 (562)
..|.+.+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence 35889999999999999999875433 468999886432 334667899999999999 5999999999875 4568
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 166 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARD 241 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC-----
T ss_pred eEEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---CCCCEEEeecccccc
Confidence 8999999999999998843 345689999999999999999999999999999999999998 578999999999986
Q ss_pred cCCCCC-----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 252 IKPGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 252 ~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....+....+..+..... .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p 318 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---P 318 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---C
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---C
Confidence 543221 233467889999998865 46889999999999999999 7888887777777777666543222 2
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+++.+.++|.+||..||.+|||+.++++
T Consensus 319 ~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 319 EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 468899999999999999999999999985
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=363.54 Aligned_cols=255 Identities=18% Similarity=0.277 Sum_probs=207.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++++.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.|.++++|+.+..++......
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 355789999999999999999999999999999998765442 234778999999998667888888888889999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
+|||||+ +++|.+++.. ....+++..++.++.||+.||.|||++|||||||||+||||+....++.+||+|||+++..
T Consensus 79 ~lvme~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp EEEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEEECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 9999999 8999998753 3467999999999999999999999999999999999999953335789999999999876
Q ss_pred CCCCC--------cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh---hHHHHHHhCCCC-C
Q 008547 253 KPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPD-F 319 (562)
Q Consensus 253 ~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~-~ 319 (562)
..... ....+||+.|+|||++.+ .++.++|||||||+||+|++|+.||.+.... ..+..+...... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence 54322 225689999999999876 4588999999999999999999999875442 223332221110 0
Q ss_pred CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 320 ~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
....+..+++++.+||..||..||.+||++.++++
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 01111457899999999999999999999998865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=368.52 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=214.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.+|+.|. ||||+++++++.. +.+|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCE
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccce
Confidence 34679999999999999999999765 45799999976542 3467899999999995 9999999999876 6789
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
|||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+++...
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTCC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceecC
Confidence 999999999999998654446799999999999999999999999999999999999998 46789999999998764
Q ss_pred CCC--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 254 PGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 254 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
... ......+|..|+|||++.. .++.++|||||||+||||++ |+.||.+....++...+..+.. ....+.+++
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~ 491 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPECPE 491 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTTCCH
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCH
Confidence 321 1123456788999998764 56889999999999999999 9999999888888877766532 222356899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc--Ccccccc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 361 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~--hp~f~~~ 361 (562)
.+.+||.+||..||++|||+.++++ ..+|...
T Consensus 492 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999986 3555543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=339.30 Aligned_cols=241 Identities=28% Similarity=0.427 Sum_probs=192.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||.||+|.+ +++.||||++... ...+.+.+|+.+++++ +||||+++++++.+ ..++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEEE
Confidence 4799999999999999999976 4788999998643 2557789999999999 59999999998774 47899
Q ss_pred EeccCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCceEeccCCCCCC-eEEeeccCcc
Q 008547 176 MELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSD 250 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~NIll~~~~~~~~-vkl~DfG~a~ 250 (562)
|||+++|+|.+++..... ..++...+..++.||+.||.|||+ +||+||||||+|||++. ++. +||+|||++.
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA---GGTVLKICDFGTAC 154 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET---TTTEEEECCCCC--
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC---CCCEEEEccccccc
Confidence 999999999998854322 247899999999999999999999 89999999999999984 444 8999999997
Q ss_pred ccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh--hHHHHHHhCCCCCCCCCCCCC
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 327 (562)
..... .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+.... .....+.+
T Consensus 155 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 229 (307)
T 2eva_A 155 DIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT---RPPLIKNL 229 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC---CCCCBTTC
T ss_pred ccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC---CCCccccc
Confidence 65432 234579999999999876 4588999999999999999999999765432 2233333322 22233578
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+.+||.+||..||.+|||+.++++
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=352.27 Aligned_cols=247 Identities=21% Similarity=0.262 Sum_probs=197.1
Q ss_pred ccceeecceeeccCCeEEEEE-----EEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccC--CCCcceEEEEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG--HENVVKFYNAFE 167 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~l~~~~~ 167 (562)
.++|.+.+.||+|+||.||+| .+..+++.||||++... ....+..|+.+++.+.. |+||+.+++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 467999999999999999999 46778999999998654 34567788888888842 899999999999
Q ss_pred cCCeEEEEEeccCCCChHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc--------CC
Q 008547 168 DDNYVYIAMELCEGGELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS--------AK 236 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~--------~~ 236 (562)
..+..|+||||+++|+|.+++... ....+++..++.++.||+.||.|||++|||||||||+||||+. ..
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence 999999999999999999988543 3467999999999999999999999999999999999999974 12
Q ss_pred CCCCeEEeeccCccccC---CCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHH
Q 008547 237 EDSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 312 (562)
.++.+||+|||+|+... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.........
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--- 294 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK--- 294 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---
Confidence 26899999999996543 33344567899999999998765 589999999999999999999999654321100
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....+.. ...++.+.+++..||..+|.+|++..+.+.+
T Consensus 295 --~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 295 --PEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp --ECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred --echhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 0111111 1246788999999999999999765555543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=369.92 Aligned_cols=243 Identities=22% Similarity=0.287 Sum_probs=202.6
Q ss_pred cceeeccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEec
Q 008547 101 GKLLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 178 (562)
.+.||+|+||.||+|.+ ..+++.||||++..... .....+.+.+|+.+++.|. |||||++++++..+ .+++||||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~-~~~lv~E~ 450 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEM 450 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SEEEEEEC
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-CEEEEEEc
Confidence 34799999999999954 45678999999875432 3345678999999999995 99999999999754 58899999
Q ss_pred cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCC-
Q 008547 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 257 (562)
Q Consensus 179 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~- 257 (562)
+++|+|.+++. ....+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+.......
T Consensus 451 ~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 451 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHHHTTC----
T ss_pred cCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCccccccCccc
Confidence 99999999884 346799999999999999999999999999999999999998 477999999999987654332
Q ss_pred ---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 258 ---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 258 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
.....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+..+... .....+++++.
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~ 602 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMY 602 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHH
Confidence 223456789999999865 56889999999999999998 99999999888888777765432 22246899999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+||.+||..||++||++.++++
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999999874
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=361.10 Aligned_cols=250 Identities=20% Similarity=0.208 Sum_probs=194.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCC-CCcc--------------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVV-------------- 160 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv-------------- 160 (562)
+.|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. | +|+.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchhh
Confidence 45889999999999999999999999999999987544333344677899999999885 4 3211
Q ss_pred -------eEEEEEEc-----CCeEEEEEeccCCCChHHHHH-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 008547 161 -------KFYNAFED-----DNYVYIAMELCEGGELLDRIL-----AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223 (562)
Q Consensus 161 -------~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~-----~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 223 (562)
.+..++.. ...++++|+++ +++|.+++. ......+++..+..++.||+.||.|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 11111111 22467788876 679988773 2223457788899999999999999999999999
Q ss_pred cCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcccCchhcc----------c-CCCCCcchHHHHHHHHH
Q 008547 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----------R-KSGPESDVWSIGVITYI 292 (562)
Q Consensus 224 Dlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~----------~-~~~~~~DiwslG~il~e 292 (562)
||||+||||+ .++.+||+|||+++..... ....+| +.|+|||++. . .++.++|||||||++|+
T Consensus 236 DiKp~NILl~---~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVLD---QRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEEC---TTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEEe---cCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999998 4778999999998765432 455678 9999999883 2 24678999999999999
Q ss_pred HHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 293 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 293 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
|++|+.||...........+.. .++.+|+++.+||.+||..||++||++.++++||||+..
T Consensus 310 lltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 9999999987665544333322 234688999999999999999999999999999999764
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=342.58 Aligned_cols=252 Identities=22% Similarity=0.339 Sum_probs=194.2
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc-CCCCcceEEEEEEc
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFYNAFED 168 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~hp~iv~l~~~~~~ 168 (562)
....+.++|++.+.||+|+||.||+|.+. |+.||||++... ....+.+|.+++..+. +||||+++++++..
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 34456678999999999999999999864 889999998543 2334455666665442 69999999999987
Q ss_pred C----CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeccCC
Q 008547 169 D----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 169 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~iiHrDlkp~NIll~~~~ 236 (562)
. ..+|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ ||+||||||+|||++
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~--- 176 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK--- 176 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---
Confidence 7 789999999999999998843 3689999999999999999999999 999999999999998
Q ss_pred CCCCeEEeeccCccccCCCCC-----cccccCCCcccCchhcccCC-CCC------cchHHHHHHHHHHHhC--------
Q 008547 237 EDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-GPE------SDVWSIGVITYILLCG-------- 296 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-~~~------~DiwslG~il~el~~g-------- 296 (562)
.++.+||+|||++........ ....+||+.|+|||++.+.. ... +|||||||++|+|++|
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 478999999999976543322 12458999999999987653 333 8999999999999999
Q ss_pred --CCCCCCCCh----hhHHHHHHhCCCCCCCCC----CCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 297 --RRPFWDKTE----DGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 297 --~~pf~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..||..... ..............+..+ ...+++++.+||.+||..||.+|||+.+++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 777754321 122222222111111110 01355679999999999999999999999863
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=366.93 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=204.1
Q ss_pred cceeecc-eeeccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGK-LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~-~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
..+.+.+ .||+|+||.||+|.++. ++..||||++.... .....+.+.+|+.+|+.+ +|||||++++++.. +.+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~ 410 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EAL 410 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCe
Confidence 3455555 89999999999998753 56679999987543 233567899999999999 59999999999986 559
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+..
T Consensus 411 ~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEEECCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTTTTC
T ss_pred EEEEEeCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCcccc
Confidence 999999999999998743 345699999999999999999999999999999999999998 4789999999999876
Q ss_pred CCCCCc----ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
...... ....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+..+... ...+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~ 563 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 563 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---CCCTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCCc
Confidence 433221 12345689999999864 56889999999999999998 99999998888888777765422 22246
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+++++.+||.+||..||.+||++.++++
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999853
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=354.52 Aligned_cols=250 Identities=17% Similarity=0.217 Sum_probs=197.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHcc--------CCCCcceE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALA--------GHENVVKF 162 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~--------~hp~iv~l 162 (562)
++|++.+.||+|+||+||+|.+ +|+.||||++...... .....+.+.+|+.+++.|. +||||+++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 5799999999999999999987 7899999999765321 2234577899999999986 48888888
Q ss_pred EEEEE------------------------------cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 008547 163 YNAFE------------------------------DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212 (562)
Q Consensus 163 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l 212 (562)
.+++. ..+.+|+||||+++|++++.+.. ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 87653 26789999999999988777632 5689999999999999999
Q ss_pred HHHH-HcCceeccCCCCceEeccCC-----------------CCCCeEEeeccCccccCCCCCcccccCCCcccCchhcc
Q 008547 213 AECH-LHGLVHRDMKPENFLFKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274 (562)
Q Consensus 213 ~~lH-~~~iiHrDlkp~NIll~~~~-----------------~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~ 274 (562)
.||| ++||+||||||+||||+..+ ....+||+|||+|+..... ..+||+.|+|||++.
T Consensus 175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGC
T ss_pred HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhc
Confidence 9999 99999999999999998521 0128999999999876532 348999999999998
Q ss_pred cCCCCCcchHHHHHH-HHHHHhCCCCCCCCCh-hhHHHHHHhCCCC---CCCCCCCCCCHHHHHHHHHcCccCccCCCCH
Q 008547 275 RKSGPESDVWSIGVI-TYILLCGRRPFWDKTE-DGIFKEVLRNKPD---FRRKPWPSISNSAKDFVKKLLVKDPRARLTA 349 (562)
Q Consensus 275 ~~~~~~~DiwslG~i-l~el~~g~~pf~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~ 349 (562)
+..+.++||||||++ .+++++|..||.+... ......+...... .....++.+++++.+||.+||.+| |+
T Consensus 251 g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 251 GDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp CCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred CCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 877889999998777 6788889999843211 1122333322111 111112357788999999999976 99
Q ss_pred HHHh-cCcccc
Q 008547 350 AQAL-SHPWVR 359 (562)
Q Consensus 350 ~~~l-~hp~f~ 359 (562)
.++| +||||+
T Consensus 326 ~e~l~~Hp~f~ 336 (336)
T 2vuw_A 326 TDLLCQHSLFK 336 (336)
T ss_dssp HHHHHHCGGGC
T ss_pred HHHHhcCCCcC
Confidence 9999 999995
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=342.52 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=201.1
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHc-cCCCCcceEEEEEEc
Q 008547 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFED 168 (562)
Q Consensus 90 ~~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~~hp~iv~l~~~~~~ 168 (562)
....+.++|.+.+.||+|+||.||+|.+ +|+.||||++... ....+.+|++++..+ .+||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3445667899999999999999999986 5899999998643 345678899999883 269999999999987
Q ss_pred CC----eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HcCceeccCCCCceEeccCC
Q 008547 169 DN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHRDMKPENFLFKSAK 236 (562)
Q Consensus 169 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH--------~~~iiHrDlkp~NIll~~~~ 236 (562)
.. .+++||||+++|+|.+++.. ..+++..++.++.||+.||.||| +.||+||||||+|||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~--- 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--- 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---
Confidence 76 89999999999999998843 36899999999999999999999 89999999999999998
Q ss_pred CCCCeEEeeccCccccCCCCC-----cccccCCCcccCchhcccCC-------CCCcchHHHHHHHHHHHhC--------
Q 008547 237 EDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCG-------- 296 (562)
Q Consensus 237 ~~~~vkl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-------~~~~DiwslG~il~el~~g-------- 296 (562)
.++.+||+|||++........ .....||+.|+|||++.+.. +.++|||||||++|+|++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 478999999999977654332 24557999999999987643 2579999999999999999
Q ss_pred --CCCCCCCCh-----hhHHHHHHhCCCCCCCC-CC--CCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 297 --RRPFWDKTE-----DGIFKEVLRNKPDFRRK-PW--PSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 297 --~~pf~~~~~-----~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..||..... ......+.........+ .+ ...++.+.+||.+||..||.+|||+.+++++
T Consensus 262 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred ccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 788866432 22333332222111111 00 1234578999999999999999999999863
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=338.50 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=202.3
Q ss_pred ccceeecceeeccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 95 DRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.++|++++.||+|+||.||+|. +..+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecC
Confidence 3579999999999999999998 46689999999987542 34567899999999999 5999999999987644
Q ss_pred --eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 --YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL 191 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTT
T ss_pred CCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEecCcc
Confidence 789999999999999988543 35689999999999999999999999999999999999998 478899999999
Q ss_pred ccccCCCCC----cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChh------------h---H
Q 008547 249 SDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED------------G---I 308 (562)
Q Consensus 249 a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~---~ 308 (562)
+........ .....+|+.|+|||++.+. ++.++||||||+++|+|++|..||...... . .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 987654332 1234577889999998654 578999999999999999999998532110 0 1
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+...+...... +..+.+++++.+||.+||..||.+|||+.++++
T Consensus 272 ~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 272 LIELLKNNGRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHTTCCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhcCCCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11222222111 223568999999999999999999999999974
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=340.62 Aligned_cols=251 Identities=23% Similarity=0.334 Sum_probs=187.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHH--HHccCCCCcceEEEEEE-----c
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL--QALAGHENVVKFYNAFE-----D 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l--~~l~~hp~iv~l~~~~~-----~ 168 (562)
++|++.+.||+|+||.||+|.+ +|+.||||++.... ...+..|..++ ..+ +||||+++++.+. .
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTS
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheecccccccCC
Confidence 5799999999999999999965 68999999986442 23444455444 346 6999999998554 2
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHc---------CceeccCCCCceEeccCCCCC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---------~iiHrDlkp~NIll~~~~~~~ 239 (562)
...+++||||+++|+|.+++... ..++..+..++.||+.||.|||+. ||+||||||+|||++ .++
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~ 157 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDG 157 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTS
T ss_pred CceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCC
Confidence 34679999999999999988433 458999999999999999999999 999999999999998 478
Q ss_pred CeEEeeccCccccCCCC---------CcccccCCCcccCchhccc--------CCCCCcchHHHHHHHHHHHhCCCCCCC
Q 008547 240 SLKATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLCGRRPFWD 302 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~el~~g~~pf~~ 302 (562)
.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 99999999997654321 1234579999999999875 235689999999999999999777643
Q ss_pred CChh-----------------hHHHHHHhCCCCCC--CCCCC---CCCHHHHHHHHHcCccCccCCCCHHHHh------c
Q 008547 303 KTED-----------------GIFKEVLRNKPDFR--RKPWP---SISNSAKDFVKKLLVKDPRARLTAAQAL------S 354 (562)
Q Consensus 303 ~~~~-----------------~~~~~~~~~~~~~~--~~~~~---~~~~~~~~ll~~~l~~dP~~Rps~~~~l------~ 354 (562)
.... .............+ ...|+ .+++++.+||.+||..||++|||+.+++ -
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 2210 11111111111100 11111 1445799999999999999999999995 4
Q ss_pred Ccccccc
Q 008547 355 HPWVREG 361 (562)
Q Consensus 355 hp~f~~~ 361 (562)
++|-++.
T Consensus 318 ~~~~~~~ 324 (336)
T 3g2f_A 318 MIWERNK 324 (336)
T ss_dssp HCCCC--
T ss_pred HHHHhcc
Confidence 6776654
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=339.92 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=203.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||.||+|.+.. .||+|++...... ....+.+.+|+.+++.+ +||||+++++++...+.+++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN-EDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC-CCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC-HHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEE
Confidence 4579999999999999999998753 4999998654321 22335577899999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGV 181 (319)
T ss_dssp ECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC----
T ss_pred EeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCcccccc
Confidence 9999999999988743 234689999999999999999999999999999999999997 46899999999875431
Q ss_pred ------CCCcccccCCCcccCchhccc----------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCC
Q 008547 255 ------GKKFQDIVGSAYYVAPEVLKR----------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318 (562)
Q Consensus 255 ------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 318 (562)
........||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+......
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence 122334568999999999854 2477899999999999999999999988887777777655432
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
. .....++.++.+||.+||..||.+|||+.++++
T Consensus 262 ~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 262 N--LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp C--CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred C--CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2 122357889999999999999999999999985
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=362.20 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=207.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
.++|.+.+.||+|+||.||+|.+..+ +..||||++.... .....+.+.+|+.+++.+ +||||+++++++. .+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCc
Confidence 46899999999999999999998654 4579999876432 344567899999999999 5999999999985 456
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRY 540 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCCCS
T ss_pred eEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecCCCee
Confidence 89999999999999988543 35689999999999999999999999999999999999998 478999999999987
Q ss_pred cCCCCCc--ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
....... ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..+... +..+.+
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~ 617 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNC 617 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC---CCCTTC
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCccc
Confidence 6543322 23456789999998865 46889999999999999997 99999998888888777765432 223568
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+.+||.+||..||.+|||+.++++
T Consensus 618 ~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 618 PPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999874
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=330.41 Aligned_cols=228 Identities=16% Similarity=0.137 Sum_probs=189.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.++..+ +||||+++++++...+..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcE
Confidence 4567899999999999999999999999999999999876655556678899999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||++|++|.+++. . + .....+..++.||+.||.|||++||+||||||+|||++ .++.+||+++|
T Consensus 107 ~lv~e~~~g~~L~~~l~--~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~----- 174 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVAD--T-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPA----- 174 (286)
T ss_dssp EEEEECCCEEEHHHHHT--T-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCC-----
T ss_pred EEEEEecCCCCHHHHHh--c-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEecc-----
Confidence 99999999999999872 2 2 46667899999999999999999999999999999998 57889988544
Q ss_pred CCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHH---HHHhCCCCCCCCCCCCCCH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK---EVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 329 (562)
|++| ++.++|||||||++|+|++|+.||.+.+....+. ..............+.+++
T Consensus 175 --------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T 3uqc_A 175 --------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPF 234 (286)
T ss_dssp --------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCH
T ss_pred --------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCH
Confidence 3332 5778999999999999999999998765533211 1111111111112356899
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhc
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
++.+||.+||..||.+| |+.++++
T Consensus 235 ~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 235 QISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999999999999999 9999985
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=373.05 Aligned_cols=246 Identities=24% Similarity=0.366 Sum_probs=203.6
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~ 169 (562)
...+.++|++.+.||+|+||.||+|.+.. +|+.||||++.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 151 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHT 151 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEE
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeec
Confidence 34566899999999999999999999876 78999999886532 3445677899999999994 99999999999866
Q ss_pred Ce-----EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEe
Q 008547 170 NY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244 (562)
Q Consensus 170 ~~-----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~ 244 (562)
+. .||||||++|++|.+.+. ..+++..++.++.||+.||.|||++|||||||||+|||++. +.+||+
T Consensus 152 ~~~~~~~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~----~~~kl~ 223 (681)
T 2pzi_A 152 DRHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE----EQLKLI 223 (681)
T ss_dssp CTTSCEEEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS----SCEEEC
T ss_pred CCCCCceeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC----CcEEEE
Confidence 54 799999999999988652 26999999999999999999999999999999999999983 489999
Q ss_pred eccCccccCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 245 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 245 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
|||++...... ...+||+.|+|||++.+..+.++|||||||++|+|++|.+||.+...... + ...+.
T Consensus 224 DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------~--~~~~~ 290 (681)
T 2pzi_A 224 DLGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------P--EDDPV 290 (681)
T ss_dssp CCTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------C--TTCHH
T ss_pred ecccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc--------c--ccccc
Confidence 99999876543 45679999999999988788899999999999999999999865321110 0 00111
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
...++.+.+||.+||..||.+||+..+.+.|+|+..
T Consensus 291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 124578999999999999999999999999988753
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=312.59 Aligned_cols=232 Identities=14% Similarity=0.093 Sum_probs=158.4
Q ss_pred eeeccCCeEEEEEEEcCCCCEEEEEEecccccC-------chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
..+.|++|.+..++....|+.||+|++.+.... .....+.+.+|+++|+++.+|+||+++++++++++.+|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 356788888887777788999999998754321 1234567999999999998899999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||++|++|.+.+. ..+++++. .|+.||+.||.|||++|||||||||+||||+ .++.|||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeecccCeeCCCC
Confidence 99999999999984 44667764 5789999999999999999999999999998 5789999999999876543
Q ss_pred -CCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 -KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+.+||+.|+|||++.+....++|+||+|+++++|.++..++ ...+... + .. ...+..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~-~---~~-----~~~~~~l 455 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE-P---VE-----RWNFVLL 455 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHTS-C---GG-----GCSHHHH
T ss_pred CccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhcC-C---CC-----CCcHHHH
Confidence 334567899999999999998888999999999998887664443 1111111 1 00 1124566
Q ss_pred HHHcCccCccCCCCHHHHhcCcccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
...+...+|..||.......++|..
T Consensus 456 ~~~l~~~~~~~~~~~~~~~~~~~~~ 480 (569)
T 4azs_A 456 LALFEKKAKLPSAEQQRGATEQWII 480 (569)
T ss_dssp HHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred HHHHhCCCCCCCCChhhhccchhHH
Confidence 6677777777777766655566643
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-28 Score=260.20 Aligned_cols=185 Identities=18% Similarity=0.171 Sum_probs=143.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
+...+.||+|+||.||+| ...+..+|+|+........+ ...+.+.+|+.+++++. ||||+.+..++...+..
T Consensus 338 ~~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~ 414 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNK 414 (540)
T ss_dssp ----------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTT
T ss_pred CCCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCcc
Confidence 345678999999999999 45678999998655433222 12456899999999995 99999655555567777
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||||||++|++|.+++.. +..++.||+.||.|||++||+||||||+|||++ . .+||+|||+|+..
T Consensus 415 ~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 415 RIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---K--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---S--SEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---C--eEEEEECccCEEC
Confidence 999999999999998732 568999999999999999999999999999998 2 8999999999887
Q ss_pred CCCCC--------cccccCCCcccCchhccc---CCCCCcchHHHHHHHHHHHhCCCCC
Q 008547 253 KPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPF 300 (562)
Q Consensus 253 ~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~pf 300 (562)
..... ....+||+.|+|||++.. .|+..+|+||..+-..+.+.++.+|
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 54322 135689999999999864 4577789999999999888877776
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=208.62 Aligned_cols=180 Identities=31% Similarity=0.496 Sum_probs=142.0
Q ss_pred cCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhh
Q 008547 354 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433 (562)
Q Consensus 354 ~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~ 433 (562)
.|||.+... ...++++...+.+|++|...++++...+..++..++++++..+.++|..+|.|++|.|+.+||..++..
T Consensus 8 ~~~~~~~~~-~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~- 85 (197)
T 3pm8_A 8 SSGRENLYF-QGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK- 85 (197)
T ss_dssp ----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred cchHhhhcc-CCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-
Confidence 489988654 456788899999999999999999999999999999999999999999999999999999999999965
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
+|..++..++..+|..+|.|++|.|+|+||+..+........ ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 86 ~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 159 (197)
T 3pm8_A 86 IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLK------KEVCLIPFKFFDIDGNGKISVEELKRIFGRDD 159 (197)
T ss_dssp HC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCS------HHHHHHHHHHHCTTCSSEECHHHHHHHHC---
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhh------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence 788889999999999999999999999999976654432222 3478889999999999999999999999987
Q ss_pred -C------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 513 -G------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 513 -~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+ +++.+|..+|.|+||.|+|+||+.+|++
T Consensus 160 ~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 160 IENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp -CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 3 3889999999999999999999999975
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-25 Score=203.16 Aligned_cols=177 Identities=28% Similarity=0.440 Sum_probs=147.8
Q ss_pred cCccccccCCCCCCCccHHHHHHHHhhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhh
Q 008547 354 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 433 (562)
Q Consensus 354 ~hp~f~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~ 433 (562)
.|||+-.... ...+++..++.+|++|...++++...+..++..++++++.++.++|..+|.|++|.|+.+||..++..
T Consensus 3 ~~~~~~~~~~-~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~- 80 (191)
T 3k21_A 3 HHHHHSSGRE-NLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK- 80 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred CCccccCCcc-ccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-
Confidence 4777765433 34567788999999999999999999999999999999999999999999999999999999999955
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
+|...+ .++..+|..+|.|++|.|+|+||+..+..... .. ...++.+|+.||+|++|+|+.+||+.++...+
T Consensus 81 ~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~----~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 152 (191)
T 3k21_A 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ----LS---KKLIYCAFRVFDVDNDGEITTAELAHILYNGN 152 (191)
T ss_dssp TTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG----CC---HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSS
T ss_pred cCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh----cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcC
Confidence 888888 89999999999999999999999987654321 11 24788899999999999999999999997532
Q ss_pred -----------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 514 -----------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 514 -----------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
++..+|..+|.|+||.|+|+||+.+|+
T Consensus 153 ~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 153 KKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 378899999999999999999999985
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-25 Score=215.76 Aligned_cols=159 Identities=24% Similarity=0.267 Sum_probs=122.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch---------------hhHHHHHHHHHHHHHccCCCCcce
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---------------IAVEDVKREVKILQALAGHENVVK 161 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~~hp~iv~ 161 (562)
.|.+++.||+|+||.||+|.+ .+|+.||||++........ .....+.+|+.+++.+. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 466779999999999999998 8899999999864321110 24567899999999996 444444
Q ss_pred EEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCe
Q 008547 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241 (562)
Q Consensus 162 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~v 241 (562)
++.. +..|+||||++|++|.+ + . ......++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus 169 ---~~~~-~~~~lvmE~~~g~~L~~-l--~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~v 231 (282)
T 1zar_A 169 ---VYAW-EGNAVLMELIDAKELYR-V--R------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGI 231 (282)
T ss_dssp ---EEEE-ETTEEEEECCCCEEGGG-C--C------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEE
T ss_pred ---EEec-cceEEEEEecCCCcHHH-c--c------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcE
Confidence 4433 45699999999999977 4 1 123557999999999999999999999999999998 5789
Q ss_pred EEeeccCccccCCCCCcccccCCCcccCchhccc-----------CCCCCcchHHH
Q 008547 242 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----------KSGPESDVWSI 286 (562)
Q Consensus 242 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~Diwsl 286 (562)
||+|||+|.. +..|+|||.+.. .++..+|+|.+
T Consensus 232 kl~DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 232 WIIDFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp EECCCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred EEEECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 9999999863 356889998742 34555666653
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-23 Score=191.26 Aligned_cols=140 Identities=30% Similarity=0.500 Sum_probs=125.2
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
+.+++++++.+++++|..||.|++|.|+..||..+|. .+|..+++.++..++..+|.+++|.|+|.||+..+.......
T Consensus 2 a~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~-~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~ 80 (176)
T 2lhi_A 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN 80 (176)
T ss_dssp CCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHH-HHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence 3678999999999999999999999999999999995 499999999999999999999999999999998765432221
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.....++.+|+.||+|++|+|+.+||+.+|...+ +++++|+.+| |+||.|+|+||+++|++
T Consensus 81 -----~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 81 -----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp -----HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred -----CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 1235788999999999999999999999998877 3899999999 99999999999999975
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=184.25 Aligned_cols=139 Identities=29% Similarity=0.518 Sum_probs=124.3
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 476 (562)
.++++++.+++++|..+|.|++|.|+..||..++. .++..++..++..++..+|.+++|.|+|.||+..+.........
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMR-TLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDT 81 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHH-HHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHH-hcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCc
Confidence 57899999999999999999999999999999995 48999999999999999999999999999999877654332211
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...++.+|+.||+|++|+|+.+||+.++...| +++++|+.+|.|+||.|+|+||+++|.+
T Consensus 82 -----~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 82 -----EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp -----HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred -----HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 34788999999999999999999999998777 4899999999999999999999999964
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=202.20 Aligned_cols=140 Identities=28% Similarity=0.552 Sum_probs=123.3
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+|+++|..||.|++|.|+.+||..+|. .+|..+++.++..+++.+|.|++|.|+|+||+.++........
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLr-sLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999995 4999999999999999999999999999999987764332222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. .+.++++|+.||+|++|+|+.+||+.+|...+ +++++|+.+|.|+||.|+|+||+++|..
T Consensus 373 ~-----eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 373 S-----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred h-----HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 1 24788899999999999999999999998776 4899999999999999999999999863
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=177.18 Aligned_cols=136 Identities=26% Similarity=0.481 Sum_probs=120.0
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
+++++.+++++|..||.|++|.|+.+||..+|. .+|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~----- 74 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMR-ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE----- 74 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhcc-----
Confidence 356788999999999999999999999999995 49999999999999999999999999999999876543221
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
......++.+|+.||+|++|+|+.+||+.++...+ +++++|..+|.|+||.|+|+||+.+|.
T Consensus 75 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred ccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 11235788999999999999999999999998776 389999999999999999999999885
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-23 Score=182.89 Aligned_cols=141 Identities=19% Similarity=0.322 Sum_probs=120.8
Q ss_pred ccchHHhhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 397 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.++++++.+++++|..||. |++|.|+..||..+| +.+|..+++.++..++. .+.+++|.|+|+||+.++.......
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~l-r~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~ 79 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLL-RCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKD 79 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHH-HHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhccc
Confidence 4789999999999999995 899999999999999 55999999999998765 4778899999999998876544322
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcC--CCCCcccHHHHHHHHHhc
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADI--DKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~--d~dG~i~~~eF~~~l~~~ 542 (562)
.... ...++++|+.||+|++|+|+.+||+.+|...| +++.+|+.+|. |+||.|+|+||+++|...
T Consensus 80 ~~~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 80 TGTA---ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TTCC---HHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred ccch---HHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 2222 34788999999999999999999999998887 48999999995 889999999999999753
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-22 Score=181.23 Aligned_cols=163 Identities=29% Similarity=0.461 Sum_probs=140.7
Q ss_pred cHHHHHHHHhhhhhhhhHHHHHHhhccccc--hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHH
Q 008547 370 DISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 447 (562)
Q Consensus 370 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~~~--~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~ 447 (562)
...++.+|++|...++++...+..+...++ ++++.++.++|..+|.|++|.|+.+||..++.. +|.. ..++..+|
T Consensus 3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~g~~--~~~~~~~~ 79 (180)
T 3mse_B 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLAS-VGIK--KWDINRIL 79 (180)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TTCC--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-cCCC--HHHHHHHH
Confidence 457889999999999999999998888887 899999999999999999999999999999954 7754 58899999
Q ss_pred HhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhc
Q 008547 448 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEAD 523 (562)
Q Consensus 448 ~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D 523 (562)
..+|.|++|.|+|+||+..+....... ...++.+|+.||+|++|+|+.+||+.++.... +++.+|..+|
T Consensus 80 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d 152 (180)
T 3mse_B 80 QALDINDRGNITYTEFMAGCYRWKNIE-------STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVH 152 (180)
T ss_dssp HHHCTTCCSEECHHHHHHHHSCCTTC---------CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHhcccCC-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence 999999999999999998776433211 13678899999999999999999999998433 4899999999
Q ss_pred CCCC--------CcccHHHHHHHHHhc
Q 008547 524 IDKD--------GRISLSEFRRLLRTA 542 (562)
Q Consensus 524 ~d~d--------G~i~~~eF~~~l~~~ 542 (562)
.|+| |.|+|+||+.+|.+.
T Consensus 153 ~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 153 SIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp TC---------CCCBCHHHHHHHHHTT
T ss_pred hccCcccccccCCeeeHHHHHHHHHhc
Confidence 9999 999999999999753
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=185.52 Aligned_cols=169 Identities=30% Similarity=0.449 Sum_probs=146.9
Q ss_pred CccHHHHHHHHhhhhhhhhHHHHHHhhcccc-chHHhhhhccccccccCCCCCCCCHHHHHHHHHhh----------CCC
Q 008547 368 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----------LPW 436 (562)
Q Consensus 368 ~~~~~~l~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----------~~~ 436 (562)
|.....+.+|+++...+.++..++..+...+ +++++.++.++|..+|.|++|.|+.+||..++... .+.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 5567889999999999999999988888877 88999999999999999999999999999999652 166
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 513 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 513 (562)
.++..++..+|..+|.|++|.|+|+||+..+........ ...+..+|+.+|.|++|+|+.+||+.++....
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~ 156 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS------RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDD 156 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCC------HHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCH
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccch------HHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCH
Confidence 677899999999999999999999999987754322211 24788899999999999999999999998222
Q ss_pred -CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 514 -SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 514 -~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
++..+|..+|.|+||.|+|+||+.+|...
T Consensus 157 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999999999999864
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-22 Score=177.71 Aligned_cols=158 Identities=41% Similarity=0.716 Sum_probs=132.2
Q ss_pred hhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCccc
Q 008547 379 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458 (562)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I 458 (562)
+|...+.++...+..+...++++++.++.++|..+|.|++|.|+..||..++.. ++..++..++..+|..+|.+++|.|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i 80 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKR-VGANLKESEILDLMQAADVDNSGTI 80 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGG-GTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 466677888888888888899999999999999999999999999999999954 8999999999999999999999999
Q ss_pred chhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHH
Q 008547 459 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 459 ~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~e 534 (562)
+|+||+..+........ ...+..+|+.+|.|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+|
T Consensus 81 ~~~ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 154 (166)
T 2aao_A 81 DYKEFIAATLHLNKIER------EDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNE 154 (166)
T ss_dssp CHHHHHHHHTTCHHHHT------THHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHH
T ss_pred cHHHHHHHHHHHhhccc------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 99999987754432111 24688899999999999999999999998765 477899999999999999999
Q ss_pred HHHHHHhcc
Q 008547 535 FRRLLRTAS 543 (562)
Q Consensus 535 F~~~l~~~~ 543 (562)
|+.+|.+..
T Consensus 155 F~~~~~~~~ 163 (166)
T 2aao_A 155 FVAMMQKGS 163 (166)
T ss_dssp HHHHHC---
T ss_pred HHHHHHhcc
Confidence 999998643
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=172.63 Aligned_cols=140 Identities=29% Similarity=0.531 Sum_probs=123.2
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..+|.|++|.|+..||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~- 79 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ- 79 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH-
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCC-
Confidence 3567889999999999999999999999999999954 89999999999999999999999999999998776432211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.....++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 80 ----~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 80 ----DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp ----HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred ----CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 1235788899999999999999999999998776 3899999999999999999999999863
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=173.81 Aligned_cols=136 Identities=20% Similarity=0.365 Sum_probs=118.2
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..||.|++|.|+..||..+|. .+|..++..++..++.. ++|.|+|++|+..+........
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~-~lg~~~~~~~~~~~~~~----~~~~i~f~ef~~~~~~~~~~~~ 82 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFS-SLGRVPPDDELNAMLKE----CPGQLNFTAFLTLFGEKVSGTD 82 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHH-HTTSCCCHHHHHHHHHT----SSSCCCSHHHHHTTTTTTTTCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HcCCCccHHHHHHHHHh----ccCCccHHHHHHHHHhhhcccc
Confidence 358999999999999999999999999999999995 59999999988887764 5678999999977654433222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
. ...++.+|+.||+|++|+|+.+||+.+|...| +++.+|+.+|.| ||.|+|+||+++|.+.
T Consensus 83 --~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 83 --P---EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp --C---HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred --c---HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 1 35788999999999999999999999999887 389999999988 9999999999999864
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-21 Score=186.78 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=107.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCE--EEEEEecccccCc---------------------hhhHHHHHHHHHHHHHc
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMIL---------------------PIAVEDVKREVKILQAL 153 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l 153 (562)
.|.+.+.||+|+||.||+|.+..+|+. ||||++....... ......+.+|+.+|..|
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999998778999 9999875432110 11224688999999999
Q ss_pred cCCCCc--ceEEEEEEcCCeEEEEEeccCC-C----ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccC
Q 008547 154 AGHENV--VKFYNAFEDDNYVYIAMELCEG-G----ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDM 225 (562)
Q Consensus 154 ~~hp~i--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~iiHrDl 225 (562)
. |++| +.+++. +..+|||||+.+ | +|.+.... .++..+..++.||+.||.||| +.||+||||
T Consensus 128 ~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDl 197 (258)
T 1zth_A 128 K-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADL 197 (258)
T ss_dssp H-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSC
T ss_pred H-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 6 7654 444442 346899999942 3 55554311 235568899999999999999 999999999
Q ss_pred CCCceEeccCCCCCCeEEeeccCcccc
Q 008547 226 KPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 226 kp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
||+|||++ . .++|+|||+|...
T Consensus 198 kp~NILl~---~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYI---D--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEES---S--SEEECCCTTCEET
T ss_pred CHHHEEEc---C--cEEEEECcccccC
Confidence 99999997 2 8999999999754
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-21 Score=170.52 Aligned_cols=145 Identities=29% Similarity=0.493 Sum_probs=125.3
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
|+..++++++.++.++|..+|.|++|.|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 79 (153)
T 3ox6_A 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRT-MGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79 (153)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHH-TTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhc
Confidence 456789999999999999999999999999999999955 8999999999999999999999999999999887644322
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc-cC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
... .......++.+|+.+|+|++|+|+.+||+.++.. .+ +++.+|..+|.|+||.|+|+||+.+|.
T Consensus 80 ~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 80 ETA-DMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp CCH-HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred ccc-ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 211 1111356888999999999999999999999987 55 489999999999999999999999875
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-21 Score=171.41 Aligned_cols=141 Identities=28% Similarity=0.462 Sum_probs=124.4
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.++.++|..+|.|++|.|+..||..++. .+|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~- 97 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMR-ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGER- 97 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHH-HTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhccc-
Confidence 467889999999999999999999999999999995 489999999999999999999999999999998876543221
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.....+..+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|++.
T Consensus 98 ----~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 166 (169)
T 3qrx_A 98 ----DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 166 (169)
T ss_dssp ----HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred ----CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence 1235788899999999999999999999998776 48999999999999999999999999864
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-21 Score=175.68 Aligned_cols=157 Identities=18% Similarity=0.266 Sum_probs=124.1
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHH-----HHHHhhCCCcccHH-----HHHHHHHhcCCCCCcccchhhHH
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFV 464 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~l~~~~d~~~~g~I~~~ef~ 464 (562)
...++++++.++.++|..+|.|++|.|+.+||. .++ +.+|..++.. ++..+|..+|.|++|.|+|+||+
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~ 89 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDIC-AKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFL 89 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHH-HHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHH
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHH
Confidence 344589999999999999999999999999999 566 4488888776 68999999999999999999999
Q ss_pred HHHhhhhhhc-----ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHH
Q 008547 465 AATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLS 533 (562)
Q Consensus 465 ~~~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~ 533 (562)
..+....... ..........+..+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~ 169 (195)
T 1qv0_A 90 DGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVD 169 (195)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred HHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence 8776543211 111111112334899999999999999999999998766 38999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCC
Q 008547 534 EFRRLLRTASISSRNVPPS 552 (562)
Q Consensus 534 eF~~~l~~~~~~~~~~~~~ 552 (562)
||+.++.....+.++..|+
T Consensus 170 eF~~~~~~~~~s~d~~~~g 188 (195)
T 1qv0_A 170 EMTRQHLGFWYTLDPEADG 188 (195)
T ss_dssp HHHHHHHHHHTTCCGGGTT
T ss_pred HHHHHHHHHccCCCccCcc
Confidence 9999999987776665454
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-21 Score=167.72 Aligned_cols=140 Identities=29% Similarity=0.502 Sum_probs=122.7
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
|++.++++++.++.++|..+|.+++|.|+..||..++.. ++..++..++..++..+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~ 79 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRS-LGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC 79 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC
Confidence 456788999999999999999999999999999999955 8999999999999999999999999999999887654322
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
. .....+..+|+.+|+|++|+|+.+||+.++...+ ++..+|..+| |+||.|+|+||+.+|+
T Consensus 80 ~-----~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 80 N-----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp H-----HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred C-----CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 1 1135788899999999999999999999998776 4888999999 9999999999999875
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=169.13 Aligned_cols=146 Identities=27% Similarity=0.476 Sum_probs=126.1
Q ss_pred hhccccchHHhhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 393 ALASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 393 ~~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
.+...++++++.++.++|..+|.|+ +|.|+.+||..++.. +|..++..++..+|..+|.|++|.|+|+||+..+....
T Consensus 7 ~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~ 85 (161)
T 1dtl_A 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM 85 (161)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 3556788999999999999999999 999999999999955 89999999999999999999999999999998876543
Q ss_pred hhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 472 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
... ........++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 86 ~~~--~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 86 KDD--SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp C-------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred ccc--ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 210 0111235788999999999999999999999998776 3889999999999999999999999975
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=168.69 Aligned_cols=142 Identities=24% Similarity=0.401 Sum_probs=126.2
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
....++++++.++.++|..+|.+++|.|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus 13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 91 (161)
T 3fwb_A 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILK 91 (161)
T ss_dssp TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhc
Confidence 345688999999999999999999999999999999955 8999999999999999999999999999999887654322
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.. ....++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 92 ~~-----~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 92 RD-----PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp CC-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred CC-----cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 21 135788899999999999999999999998776 4899999999999999999999999874
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=172.42 Aligned_cols=154 Identities=19% Similarity=0.195 Sum_probs=129.5
Q ss_pred ccccchHHhhhhccccccc-cCCCCCCCCHHHHHHHHHhhC----CCcccHHHHHHHH-----------HhcCCCCCccc
Q 008547 395 ASTLDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDL----PWKLKESRVLEIL-----------QAIDCNTDGLV 458 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~~----~~~~~~~~~~~l~-----------~~~d~~~~g~I 458 (562)
+..+++++..++.++|..+ |.|++|.|+.+||..++.. + |..++..++..++ ..+|.|++|.|
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i 81 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKK-ICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQV 81 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCE
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 3456788999999999999 9999999999999999965 5 8888888898888 99999999999
Q ss_pred chhhHHHHHhhhhhh---cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCccc
Q 008547 459 DFSEFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRIS 531 (562)
Q Consensus 459 ~~~ef~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~ 531 (562)
+|+||+..+...... ...........++.+|+.+|+|++|+|+.+||..++...+ +++.+|..+|.|+||.|+
T Consensus 82 ~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~ 161 (191)
T 2ccm_A 82 TKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVT 161 (191)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCB
T ss_pred CHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcC
Confidence 999999877654221 1111122245788999999999999999999999997766 488999999999999999
Q ss_pred HHHHHHHHHhccccCCCC
Q 008547 532 LSEFRRLLRTASISSRNV 549 (562)
Q Consensus 532 ~~eF~~~l~~~~~~~~~~ 549 (562)
|+||+.++.....+.++.
T Consensus 162 ~~Ef~~~~~~~~~s~d~~ 179 (191)
T 2ccm_A 162 REIFARLWTEYFVSNDRG 179 (191)
T ss_dssp HHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 999999999877666654
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=172.24 Aligned_cols=142 Identities=27% Similarity=0.533 Sum_probs=122.0
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
+..++++++.++.++|..+|.|++|.|+..||..++.. +|..++..++..+|..+|.|++|.|+|+||+..+.......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~ 80 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCc
Confidence 45678899999999999999999999999999999955 89999999999999999999999999999998776543211
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.....++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 81 -----~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 81 -----DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp -----HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred -----ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 1235688899999999999999999999998776 48999999999999999999999999764
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=179.49 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=124.8
Q ss_pred HHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc---------CCCCCcccchh
Q 008547 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDFS 461 (562)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---------d~~~~g~I~~~ 461 (562)
...+...++++++.+++++|..+|.|++|.|+.+||..++.+.++..++..++..++..+ |.|++|.|+|+
T Consensus 38 ~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~ 117 (226)
T 2lvv_A 38 RCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLV 117 (226)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCB
T ss_pred HHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHH
Confidence 344566789999999999999999999999999999996657788887777777777776 99999999999
Q ss_pred hHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc---C----CHHHHHHHhcCCCCCcccHHH
Q 008547 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G----SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 462 ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~----~~~~~~~~~D~d~dG~i~~~e 534 (562)
||+.++........ ...++.+|+.||+|++|+|+.+||+.++... + ++..+|..+|.|+||.|+|+|
T Consensus 118 EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~E 191 (226)
T 2lvv_A 118 EFLEFRLMLCYIYD------IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDE 191 (226)
T ss_dssp CHHHHHHHHHHHHH------HHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHH
T ss_pred HHHHHHHHHHhccC------HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 99986443322211 2478889999999999999999999998654 3 599999999999999999999
Q ss_pred HHHHHHhccc
Q 008547 535 FRRLLRTASI 544 (562)
Q Consensus 535 F~~~l~~~~~ 544 (562)
|+.+|.....
T Consensus 192 F~~~~~~~~~ 201 (226)
T 2lvv_A 192 FSCWAVTKKL 201 (226)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhcCC
Confidence 9999987654
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=176.47 Aligned_cols=151 Identities=16% Similarity=0.161 Sum_probs=130.9
Q ss_pred HhhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcc
Q 008547 378 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457 (562)
Q Consensus 378 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~ 457 (562)
..+.....++..+...+...++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+++.+|.|++|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~~~~~l~~~~D~d~dg~ 103 (220)
T 3sjs_A 25 CIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQF-PGGIRLSPQTALRMMRIFDTDFNGH 103 (220)
T ss_dssp HHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCB-GGGBCCCHHHHHHHHHHHCTTCSSC
T ss_pred hccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCc
Confidence 344444556666777778889999999999999999999999999999999994 4788999999999999999999999
Q ss_pred cchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCccc
Q 008547 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRIS 531 (562)
Q Consensus 458 I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~ 531 (562)
|+|+||+..+... ..++.+|+.||+|++|+|+.+||+.++...+ +++.++..+| |+||.|+
T Consensus 104 I~~~EF~~~~~~~------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~ 170 (220)
T 3sjs_A 104 ISFYEFMAMYKFM------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCD 170 (220)
T ss_dssp BCHHHHHHHHHHH------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEE
T ss_pred CCHHHHHHHHHHH------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCc
Confidence 9999999876542 3577899999999999999999999998776 3899999999 9999999
Q ss_pred HHHHHHHHHhc
Q 008547 532 LSEFRRLLRTA 542 (562)
Q Consensus 532 ~~eF~~~l~~~ 542 (562)
|+||+++|...
T Consensus 171 ~~eF~~~~~~l 181 (220)
T 3sjs_A 171 LNCWIAICAFA 181 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988753
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=168.37 Aligned_cols=144 Identities=20% Similarity=0.369 Sum_probs=123.9
Q ss_pred cccchHHhhhhcccccccc-CCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 396 STLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D-~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
..++++++.+++++|..+| .+++|.|+.+||..++.. +|..++..++..+|..+|.+++|.|+|+||+..+.......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~ 83 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEV-LGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE 83 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHH-TTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence 4578899999999999999 999999999999999955 89999999999999999999999999999998876543221
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.. .......++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 84 ~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 84 VN-PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CC-TTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred cc-hhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 00 000123678899999999999999999999998766 4899999999999999999999999875
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=165.48 Aligned_cols=147 Identities=27% Similarity=0.471 Sum_probs=127.5
Q ss_pred hhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 393 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 393 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
.+...++++++.++.++|..+|.|++|.|+..||..++.. +|..++..++..+|..+|.+++|.|+|+||+..+.....
T Consensus 9 ~~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 87 (162)
T 1top_A 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87 (162)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHH
T ss_pred HhhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhc
Confidence 3556789999999999999999999999999999999954 899999999999999999999999999999987765432
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
... .......++.+|+.+|.|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.+.
T Consensus 88 ~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 88 EDA--KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHH--HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ccc--ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 111 011245788999999999999999999999998776 38899999999999999999999999753
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-21 Score=177.17 Aligned_cols=156 Identities=25% Similarity=0.373 Sum_probs=126.2
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..+|.|++|.|+..||..+ . .+|..+. +..+|..+|.|++|.|+|+||+..+........
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~-~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 95 (202)
T 2bec_A 21 TGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-G-ALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVED 95 (202)
T ss_dssp HCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-H-HHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-H-hcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccch
Confidence 3578899999999999999999999999999998 3 3665544 889999999999999999999988765432000
Q ss_pred -----------cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-C------CHHHHHHH----hcCCCCCcccHH
Q 008547 476 -----------HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPLLEE----ADIDKDGRISLS 533 (562)
Q Consensus 476 -----------~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~~~~----~D~d~dG~i~~~ 533 (562)
.........++.+|+.||.|++|+|+.+||+.++... + +++.++.. +|.|+||.|+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~ 175 (202)
T 2bec_A 96 EDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175 (202)
T ss_dssp HHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHH
T ss_pred hcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHH
Confidence 0011224578899999999999999999999999877 5 26666766 999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCCC
Q 008547 534 EFRRLLRTASISSRNVPPSPSGH 556 (562)
Q Consensus 534 eF~~~l~~~~~~~~~~~~~~~~~ 556 (562)
||+.+|...++.....+|++.++
T Consensus 176 EF~~~~~~~~~~~~~~~~~~~~~ 198 (202)
T 2bec_A 176 EFTKSLEKMDVEQKMSIRILKHH 198 (202)
T ss_dssp HHHHTTTTSCHHHHTSCTTTC--
T ss_pred HHHHHHHHhCccceEEEeecCCc
Confidence 99999999988888875544443
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-20 Score=168.46 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=122.4
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHH----HHHhhCCCcccHHHHH-----------HHHHhcCCCCCcccchhhH
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQ----ALAKDLPWKLKESRVL-----------EILQAIDCNTDGLVDFSEF 463 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~----~l~~~~~~~~~~~~~~-----------~l~~~~d~~~~g~I~~~ef 463 (562)
+++++.+++++|..+|.|++|.|+.+||.. ++ +.+|..++..++. .+|..+|.|++|.|+|+||
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l-~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef 80 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIA-EAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHH-HHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHH-HHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 578899999999999999999999999999 45 4589888888877 8899999999999999999
Q ss_pred HHHHhhhhhhccc--ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 464 VAATLHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 464 ~~~~~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
+..+......... ........++.+|+.||.|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~ 160 (176)
T 1nya_A 81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160 (176)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 9887654332221 1111135688999999999999999999999997665 488999999999999999999999
Q ss_pred HHHhccc
Q 008547 538 LLRTASI 544 (562)
Q Consensus 538 ~l~~~~~ 544 (562)
+|.....
T Consensus 161 ~~~~~~~ 167 (176)
T 1nya_A 161 AVRDFHF 167 (176)
T ss_dssp HHSCCSS
T ss_pred HHHHHhc
Confidence 9988655
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.7e-21 Score=166.25 Aligned_cols=135 Identities=19% Similarity=0.371 Sum_probs=119.0
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
+++++.++.++|..+|.|++|.|+..||..++.. +|..++..++..+++.+|.+++|.|+|+||+..+........ .
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~--~ 77 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTT--S 77 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCC--C
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCC--h
Confidence 3578899999999999999999999999999955 899999999999999999999999999999988765322111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
...++.+|+.+|+|++|+|+.+||+.++...+ +++.+|..+| |+||.|+|+||+.+|.
T Consensus 78 ---~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 78 ---EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp ---HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred ---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 34788899999999999999999999998776 3899999999 9999999999998774
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.8e-20 Score=170.51 Aligned_cols=154 Identities=19% Similarity=0.272 Sum_probs=125.9
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHH-----HHHHhhCCCcccHH-----HHHHHHHhcCCCCCcccchhhHHHHH
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
.+++++.+++++|..+|.|++|.|+.+||. .++ +.+|..++.. ++..+|+.+|.|++|.|+|+||+..+
T Consensus 10 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~ 88 (191)
T 1uhk_A 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVI-NNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW 88 (191)
T ss_dssp TCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence 468889999999999999999999999999 777 4588888877 68999999999999999999999877
Q ss_pred hhhhhhc-----ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHH
Q 008547 468 LHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFR 536 (562)
Q Consensus 468 ~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~ 536 (562)
....... ..........++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~ 168 (191)
T 1uhk_A 89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 168 (191)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHH
T ss_pred HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 6543211 111110111234899999999999999999999997766 38999999999999999999999
Q ss_pred HHHHhccccCCCCCCC
Q 008547 537 RLLRTASISSRNVPPS 552 (562)
Q Consensus 537 ~~l~~~~~~~~~~~~~ 552 (562)
.+|.....+.++..|+
T Consensus 169 ~~~~~~~~s~d~~~~g 184 (191)
T 1uhk_A 169 RQHLGFWYTMDPACEK 184 (191)
T ss_dssp HHHHHHHTTCCGGGTT
T ss_pred HHHHHHhcCCCCCCcc
Confidence 9999987776654343
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.7e-20 Score=168.77 Aligned_cols=149 Identities=17% Similarity=0.221 Sum_probs=125.5
Q ss_pred cchHHhhhhccccccc-cCCCCCCCCHHHHHHHHHhhCC----CcccHHHHHHH-----------HHhcCCCCCcccchh
Q 008547 398 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLP----WKLKESRVLEI-----------LQAIDCNTDGLVDFS 461 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~~~l-----------~~~~d~~~~g~I~~~ 461 (562)
+++++..++.++|..+ |.|++|.|+.+||..++.. ++ ..++..++..+ |..+|.|++|.|+|+
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~ 80 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTR-YKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE 80 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 5678899999999999 9999999999999999955 55 67777788755 999999999999999
Q ss_pred hHHHHHhhhhhh---cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHH
Q 008547 462 EFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 462 ef~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~e 534 (562)
||+..+...... ...........++.+|+.+|+|++|+|+.+||..++...+ ++..+|..+|.|+||.|+|+|
T Consensus 81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~e 160 (185)
T 2sas_A 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHH
Confidence 999887654322 1111111235788999999999999999999999997764 699999999999999999999
Q ss_pred HHHHHHhccccCC
Q 008547 535 FRRLLRTASISSR 547 (562)
Q Consensus 535 F~~~l~~~~~~~~ 547 (562)
|+.+|.....+..
T Consensus 161 f~~~~~~~~~s~~ 173 (185)
T 2sas_A 161 YKELYYRLLTSPA 173 (185)
T ss_dssp HHHHHHHHHHCSS
T ss_pred HHHHHHHHhcCCC
Confidence 9999998776666
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=175.44 Aligned_cols=152 Identities=19% Similarity=0.263 Sum_probs=117.0
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC--cccHHHHHHHH-------HhcCCCCCcccchhhHHHH
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEIL-------QAIDCNTDGLVDFSEFVAA 466 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--~~~~~~~~~l~-------~~~d~~~~g~I~~~ef~~~ 466 (562)
..++++++.++.++|..+|.|++|.|+..||..++.. ++. .++.+++..++ ..+|.|++|.|+|+||+..
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~ 106 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR-MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA 106 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 5678889999999999999999999999999999955 676 78889999999 9999999999999999987
Q ss_pred Hhh---h-h--hhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHH
Q 008547 467 TLH---V-H--QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFR 536 (562)
Q Consensus 467 ~~~---~-~--~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~ 536 (562)
+.. . . ...... ......++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~ 185 (208)
T 2hpk_A 107 NRVFAEAERERERRGEP-SLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELV 185 (208)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred HHHHhhhhhhhhccCCh-HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 751 0 0 111111 11123378899999999999999999999997654 48999999999999999999999
Q ss_pred HHHHhccccC-CCC
Q 008547 537 RLLRTASISS-RNV 549 (562)
Q Consensus 537 ~~l~~~~~~~-~~~ 549 (562)
.+|.....+. ++.
T Consensus 186 ~~~~~~~~~~~d~~ 199 (208)
T 2hpk_A 186 HLFRKFWMEPYDPQ 199 (208)
T ss_dssp HHHHHHHC------
T ss_pred HHHHHHhcCCCCCC
Confidence 9999876555 443
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-21 Score=166.85 Aligned_cols=136 Identities=18% Similarity=0.257 Sum_probs=115.4
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc-CCCCCcccchhhHHHHHhhhhhh---cccc
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQL---EEHD 477 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-d~~~~g~I~~~ef~~~~~~~~~~---~~~~ 477 (562)
++.+++++|..+|.|++|.|+..||..+|.. +|..++..++..++..+ |.+++|.|+|+||+..+...... ....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRA-IGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 5678999999999999999999999999955 89999999999999999 99999999999999887765211 1111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ...++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|..
T Consensus 81 ~---~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 K---TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp C---THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred c---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 1 24788899999999999999999999998776 3899999999999999999999999874
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.81 E-value=9.6e-21 Score=174.31 Aligned_cols=139 Identities=35% Similarity=0.640 Sum_probs=122.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.++.++|..+|.|++|.|+.+||..+|. .++..++..++..+|..+|.|++|.|+|+||+..+........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 80 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHT-TTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence 457888999999999999999999999999999995 4899999999999999999999999999999987764432211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 81 ------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 81 ------EENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp ------CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred ------HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 12567899999999999999999999998765 4899999999999999999999999975
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.2e-20 Score=160.54 Aligned_cols=138 Identities=17% Similarity=0.277 Sum_probs=121.0
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc---CCCCCcccchhhHHHHHhhhhhhc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---DCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
++++++.++.++|..+|.+++|.|+..||..++.. +|..++..++..++..+ |.++ |.|+|+||+..+.......
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~ 79 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARA-LGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK 79 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC
Confidence 57889999999999999999999999999999954 89999999999999999 9999 9999999998876542221
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
... ....++.+|+.||+|++|+|+.+||+.++...+ ++..+|.. |.|+||.|+|+||+.+|.+
T Consensus 80 ~~~---~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 80 DQG---TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred Ccc---hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 111 235788899999999999999999999998776 48899999 9999999999999999874
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-20 Score=166.86 Aligned_cols=140 Identities=21% Similarity=0.383 Sum_probs=123.0
Q ss_pred ccchHHhhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 397 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.++++++.+++++|..+|. |++|.|+..||..+|.. +|..++..++..+ ..+|.+++|.|+|+||+..+......
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~- 78 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC-LGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC- 78 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH-TTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS-
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc-
Confidence 4678899999999999999 99999999999999955 8999999999999 99999999999999999887755332
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHH--hcCCCCCcccHHHHHHHHHhc
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEE--ADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~--~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.... ...++.+|+.||+|++|+|+.+||+.++...+ ++..+|.. +|.|+||.|+|+||+.+|...
T Consensus 79 ~~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 79 EQGT---FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CCCC---HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred cCCh---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 0111 34788899999999999999999999998776 38999999 999999999999999999864
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-20 Score=162.92 Aligned_cols=134 Identities=25% Similarity=0.452 Sum_probs=117.8
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++++++.+++++|..+|.|++|.|+..||..+|.. +|..++..++..++.. ++|.|+|+||+..+........
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~-- 73 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTD-- 73 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHH-TSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSC--
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCC--
Confidence 46789999999999999999999999999999955 8999999998888776 8999999999988775433211
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|++
T Consensus 74 ~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 74 P---EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp C---HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred c---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 1 24788899999999999999999999998777 4899999999999999999999999985
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=164.87 Aligned_cols=146 Identities=18% Similarity=0.254 Sum_probs=119.8
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC----CcccHHH-H--------HHHHHhcCCCCCcccchhhHHH
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESR-V--------LEILQAIDCNTDGLVDFSEFVA 465 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~-~--------~~l~~~~d~~~~g~I~~~ef~~ 465 (562)
+++++.+++++|..+|.|++|.|+.+||..++.. ++ ..++..+ + ..+++.+| ++|.|+|+||+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~ 77 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAER-FAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFIN 77 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHH-HHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHH-HHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHH
Confidence 4678899999999999999999999999999965 55 7777777 5 35778888 899999999998
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 466 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.+...... ..........++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 78 ~~~~~~~~-~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 78 SMKEMVKN-PEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHHTTS-TTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHcCc-ccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 77765431 111112235788999999999999999999999986554 5899999999999999999999999998
Q ss_pred ccccCCCC
Q 008547 542 ASISSRNV 549 (562)
Q Consensus 542 ~~~~~~~~ 549 (562)
.. +..+.
T Consensus 157 ~~-~~~~~ 163 (174)
T 1q80_A 157 FF-MNDGD 163 (174)
T ss_dssp HH-HCCCC
T ss_pred Hh-ccCcc
Confidence 76 44443
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=162.37 Aligned_cols=138 Identities=19% Similarity=0.301 Sum_probs=119.9
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
...++++++.++.++|..+|.|++|.|+..||..+|.. +|. .++..++..++... +|.|+|+||+..+......
T Consensus 16 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~ 90 (166)
T 2mys_B 16 FSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAA-MGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG 90 (166)
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc
Confidence 34678899999999999999999999999999999955 898 89999999999864 7999999999877654322
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.. ....++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|.+.
T Consensus 91 ~~-----~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 91 AD-----PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred CC-----cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 11 135788899999999999999999999998776 48999999999999999999999999864
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.79 E-value=7.6e-21 Score=168.16 Aligned_cols=140 Identities=19% Similarity=0.328 Sum_probs=113.3
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC--CCcccchhhHHHHHhhhhhhc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.++++++.+++++|..+|.|++|.|+..||..+|.. +|..++..++..++..+|.+ ++|.|+|+||+..+.......
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~ 81 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRA-LGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR 81 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHH-TTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC
Confidence 467889999999999999999999999999999954 89999999999999999999 999999999998876543211
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ......++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+| |+||.|+|+||+.+|.+
T Consensus 82 ~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 82 G---QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp ---------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred C---CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 1 11124577799999999999999999999998776 4899999999 99999999999998863
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-20 Score=173.24 Aligned_cols=149 Identities=18% Similarity=0.256 Sum_probs=122.1
Q ss_pred HHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc---------CCCCCcccch
Q 008547 390 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDF 460 (562)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---------d~~~~g~I~~ 460 (562)
+...+...++++++.+++++|..+|.|++|.|+..||..+|...+|..++..++..++..+ +.|++|.|+|
T Consensus 34 l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~ 113 (219)
T 3cs1_A 34 IRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDF 113 (219)
T ss_dssp HHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred HHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence 3444667789999999999999999999999999999999966578777766666655432 3478999999
Q ss_pred hhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------CHHHHHHHhcCCCCCcccHH
Q 008547 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLS 533 (562)
Q Consensus 461 ~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~ 533 (562)
+||+..+....... ....++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+
T Consensus 114 ~EF~~~~~~~~~~~------~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~ 187 (219)
T 3cs1_A 114 VEFLEFRLMLCYIY------DFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFD 187 (219)
T ss_dssp BCHHHHHHHHHHHH------HHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHH
T ss_pred HHHHHHHHHHhccc------hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence 99998765433221 135788999999999999999999999985432 59999999999999999999
Q ss_pred HHHHHHHhccc
Q 008547 534 EFRRLLRTASI 544 (562)
Q Consensus 534 eF~~~l~~~~~ 544 (562)
||+.+|.....
T Consensus 188 EF~~~~~~~~~ 198 (219)
T 3cs1_A 188 EFAAWASAVKL 198 (219)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhCC
Confidence 99999987543
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-19 Score=166.96 Aligned_cols=141 Identities=28% Similarity=0.393 Sum_probs=116.7
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
...++.+++++|..+|.|++|.|+.+||..++.. +|..++..++..+|..+|.|++|.|+|+||+..+.....
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~------ 104 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAK-LGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMS------ 104 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHT-TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCC------
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcC------
Confidence 4567899999999999999999999999999954 899999999999999999999999999999976653221
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------------CHHHHHHHhcC-CCCCcccHHHHHHHHHhccc
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADI-DKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~-d~dG~i~~~eF~~~l~~~~~ 544 (562)
......++.+|+.||.|++|+|+.+||..++...+ +++.+|..+|. |+||.|+|+||+.+|...+.
T Consensus 105 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~ 184 (204)
T 3e3r_A 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA 184 (204)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCc
Confidence 12245788999999999999999999999998542 27889999998 99999999999999998764
Q ss_pred cC
Q 008547 545 SS 546 (562)
Q Consensus 545 ~~ 546 (562)
..
T Consensus 185 ~~ 186 (204)
T 3e3r_A 185 SM 186 (204)
T ss_dssp HC
T ss_pred cC
Confidence 43
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-19 Score=158.45 Aligned_cols=140 Identities=30% Similarity=0.531 Sum_probs=115.1
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
+++++.+++++|..+|.|++|.|+.+|| ..+.. ++..+ .+..+|..+|.+++|.|+|+||+..+........
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~-~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~--- 72 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPE-LQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD--- 72 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGG-GTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCC---
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhc-cccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC---
Confidence 4678999999999999999999999999 44523 45433 7889999999999999999999988765432211
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc-cC------CHHHHHHH----hcCCCCCcccHHHHHHHHHhccccCC
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEE----ADIDKDGRISLSEFRRLLRTASISSR 547 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~----~D~d~dG~i~~~eF~~~l~~~~~~~~ 547 (562)
....++.+|+.+|+|++|+|+.+||+.++.. .+ ++..++.. +|.|+||.|+|+||+.+|.+..+...
T Consensus 73 --~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~ 150 (155)
T 3ll8_B 73 --KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKK 150 (155)
T ss_dssp --HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGGGG
T ss_pred --HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCchhe
Confidence 1357889999999999999999999999877 34 36666666 99999999999999999998776554
Q ss_pred C
Q 008547 548 N 548 (562)
Q Consensus 548 ~ 548 (562)
+
T Consensus 151 ~ 151 (155)
T 3ll8_B 151 M 151 (155)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-19 Score=158.17 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=116.4
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHH---hhCCCcccHHHHHHH-----------HHhcCCCCCcccchhhHHHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEI-----------LQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~---~~~~~~~~~~~~~~l-----------~~~~d~~~~g~I~~~ef~~~~ 467 (562)
++.+++++|..+|.|++|.|+.+||..++. +.+|..++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 457899999999999999999999999863 346888887777654 799999999999999999877
Q ss_pred hhhhhhcccc-cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 468 LHVHQLEEHD-SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 468 ~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.......... .......++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 6543322110 011124588999999999999999999999997665 58899999999999999999999999875
Q ss_pred cc
Q 008547 543 SI 544 (562)
Q Consensus 543 ~~ 544 (562)
..
T Consensus 162 ~~ 163 (166)
T 3akb_A 162 FT 163 (166)
T ss_dssp TS
T ss_pred hc
Confidence 43
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-19 Score=158.04 Aligned_cols=138 Identities=18% Similarity=0.358 Sum_probs=116.9
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
+...++++++.+++++|..+|.|++|.|+.+||..+|.. +|..++..++..++. +++|.|+|+||+..+......
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~ 82 (156)
T 1wdc_B 8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG 82 (156)
T ss_dssp ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHH-HSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS
T ss_pred hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcC
Confidence 345678899999999999999999999999999999965 799999999998885 478999999999887644221
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.. . ...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.| ||.|+|+||+.+|...
T Consensus 83 ~~--~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 83 TD--S---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CC--C---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred CC--h---HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 11 1 24788899999999999999999999998776 389999999999 9999999999999863
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-19 Score=152.77 Aligned_cols=131 Identities=25% Similarity=0.355 Sum_probs=113.2
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
+++++|..+|.+++|.|+.+||..++.. ++..++..++..+|+.+|.+++|.|+++||+..+........ ......
T Consensus 1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~---~~~~~~ 76 (134)
T 1jfj_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL---SDDKIG 76 (134)
T ss_dssp CHHHHHHHHCTTCSSEEEHHHHHHHHHT-TCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSS---HHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccccc---CCCHHH
Confidence 3677899999999999999999999954 888899999999999999999999999999987642111111 111345
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCC--HHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~--~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
++.+|+.+|.|++|+|+.+||+.++...+. +..+|..+|.|+||.|+|+||+.+|
T Consensus 77 ~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHHhCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 889999999999999999999999998887 8999999999999999999999886
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-19 Score=166.53 Aligned_cols=137 Identities=23% Similarity=0.323 Sum_probs=119.8
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
...++++++.+|.++|..||.|++|.|+..||..+|.. +|..++..++..++..+ +|.|+|+||+..+.......
T Consensus 48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~ 122 (196)
T 3dtp_E 48 FAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGT 122 (196)
T ss_dssp SCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHT-TSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSS
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCC
Confidence 35578889999999999999999999999999999954 89999999999999887 89999999998876533221
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
. . ...+..+|+.||.|++|+|+.+||+.+| ..+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 123 ~--~---~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 123 D--E---EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp C--C---HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred C--c---HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 1 1 2478889999999999999999999999 777 38999999999999999999999999853
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=160.05 Aligned_cols=126 Identities=25% Similarity=0.384 Sum_probs=114.2
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
..+++++|..+|.|++|.|+.+||..++ ..++..++..++..+|..+|.|++|.|+|+||+..+...
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------------ 92 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------------ 92 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------------
Confidence 4789999999999999999999999999 557888899999999999999999999999999776531
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3677899999999999999999999998776 4889999999999999999999999874
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.9e-19 Score=155.18 Aligned_cols=128 Identities=23% Similarity=0.331 Sum_probs=112.1
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 485 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~ 485 (562)
++++|..+|.|++|.|+.+||..++.. +|..++..++..++.. +++|.|+|+||+..+..... . .......+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~-~---~~~~~~~l 78 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRS-LGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIK-T---PTEQSKEM 78 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHH-TTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCC-C---GGGGHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHH-hCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhh-c---CcccHHHH
Confidence 899999999999999999999999955 8999999999999998 78999999999987765420 0 11123578
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 486 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 486 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 8999999999999999999999998776 3889999999999999999999999985
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-19 Score=180.97 Aligned_cols=195 Identities=23% Similarity=0.311 Sum_probs=142.8
Q ss_pred CCHHHHHHHHHcC---ccCccCCCCHHHHhcC------ccccccCCCC-----------------------CCCccHHHH
Q 008547 327 ISNSAKDFVKKLL---VKDPRARLTAAQALSH------PWVREGGDAS-----------------------EIPIDISVL 374 (562)
Q Consensus 327 ~~~~~~~ll~~~l---~~dP~~Rps~~~~l~h------p~f~~~~~~~-----------------------~~~~~~~~l 374 (562)
+..++.+|.+++. ..+|..|...++.+.| +|+.++.... ..+....++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~vl 96 (323)
T 1ij5_A 17 VHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLL 96 (323)
T ss_dssp HHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHHH
Confidence 4567888888887 7899999999999988 9988872211 011112233
Q ss_pred HHHH-hhhhhhhhHHHHHHhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC
Q 008547 375 NNMR-QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 453 (562)
Q Consensus 375 ~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~ 453 (562)
.+|+ +|...+.++. ++..++++++..+..+|..+|.|++|.|+..||..+|.. +|..++..++..++..+|.+
T Consensus 97 ~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 97 KDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCC
Confidence 4443 3334333333 456789999999999999999999999999999999965 88888899999999999999
Q ss_pred CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHH-HHHHhcCCC
Q 008547 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDP-LLEEADIDK 526 (562)
Q Consensus 454 ~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~-~~~~~D~d~ 526 (562)
++|.|+|.+|+.... ....+..+|..||.|++|+|+.+||..++ .+ ++.. +|..+|.|+
T Consensus 171 ~~G~I~f~ef~~l~~------------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~ 236 (323)
T 1ij5_A 171 TKGRMSYITLVAVAN------------DLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDE 236 (323)
T ss_dssp CSSTHHHHHHTTSHH------------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTC
T ss_pred CCCcCcHHHHHhhhh------------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCC
Confidence 999999999975321 12355668999999999999999999887 32 3788 899999999
Q ss_pred CCcccHHHHHHHHHh
Q 008547 527 DGRISLSEFRRLLRT 541 (562)
Q Consensus 527 dG~i~~~eF~~~l~~ 541 (562)
||.|+|+||+.+|..
T Consensus 237 dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 237 SDDVGFSEYVHLGLC 251 (323)
T ss_dssp SSCEEHHHHHHHHHH
T ss_pred CCEEeHHHHHHHHHH
Confidence 999999999888764
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-19 Score=152.95 Aligned_cols=131 Identities=21% Similarity=0.297 Sum_probs=111.9
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
++.+++++|..+|.|++|.|+..||..++.. +|..++..++..++. +++|.|+|+||+..+...........
T Consensus 3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~--- 74 (140)
T 1ggw_A 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRA-CGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGD--- 74 (140)
T ss_dssp CCTTTHHHHHHTCSSSSSEECHHHHHHHHHH-TSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCC---
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCccc---
Confidence 4578899999999999999999999999955 899999999998887 88999999999987765433221111
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|. +||.|+|+||+.+|.+
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 24788899999999999999999999997665 48999999999 9999999999999864
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=177.54 Aligned_cols=140 Identities=27% Similarity=0.548 Sum_probs=121.4
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..+|.|++|.|+.+||..+|.. ++..++.+++..+|+.+|.|++|.|+|+||+..+........
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~-lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~ 382 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 382 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence 4567888999999999999999999999999999955 899999999999999999999999999999987765432211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ...++.+|+.||+|++|+|+.+||+.+|...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 383 ~-----~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 383 S-----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp C-----HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred h-----hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 1 24688899999999999999999999998776 3899999999999999999999999863
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=156.76 Aligned_cols=128 Identities=27% Similarity=0.340 Sum_probs=113.0
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
.+..+++++|..+|.|++|.|+.+||..++.. ++ ..++..++..++..+|.+++|.|+|+||+..+...
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~--------- 73 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 73 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH---------
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHh-cCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---------
Confidence 35678999999999999999999999999944 66 77889999999999999999999999999765421
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 74 ---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 74 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp ---HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3677899999999999999999999998776 3889999999999999999999988864
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-18 Score=160.94 Aligned_cols=138 Identities=22% Similarity=0.349 Sum_probs=118.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+.++++++..+.+.|.. .+++|.|+.+||..++....+...+...+..+|+.+|.|++|.|+|+||+..+........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 34677888888888876 5788999999999999776777888889999999999999999999999988765542211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc------------------CCHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
...++.+|+.||+|++|+|+.+||..++... .+++.+|..+|.|+||.|+|+||+.
T Consensus 137 ------~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~ 210 (229)
T 3dd4_A 137 ------QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIE 210 (229)
T ss_dssp ------HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHH
T ss_pred ------HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHH
Confidence 3578889999999999999999999988754 1389999999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
++..
T Consensus 211 ~~~~ 214 (229)
T 3dd4_A 211 SCQK 214 (229)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9985
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-18 Score=159.46 Aligned_cols=135 Identities=24% Similarity=0.317 Sum_probs=116.1
Q ss_pred hHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 400 DEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
.-+..++.++|..||.+ ++|.|+.+||..++.. ++...+...+..+|..+|.|++|.|+|+||+..+........
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~--- 93 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKV-PDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL--- 93 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHC-CSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC---
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHH-hcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCH---
Confidence 44566788899999999 8999999999999954 787888899999999999999999999999988775432211
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc--------------------C---CHHHHHHHhcCCCCCcccHHHH
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------------------G---SIDPLLEEADIDKDGRISLSEF 535 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--------------------~---~~~~~~~~~D~d~dG~i~~~eF 535 (562)
...++.+|+.||.|++|+|+.+||..++... . ++..+|..+|.|+||.|+|+||
T Consensus 94 ---~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef 170 (204)
T 1jba_A 94 ---EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170 (204)
T ss_dssp ---THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 2467889999999999999999999988654 1 3788999999999999999999
Q ss_pred HHHHHh
Q 008547 536 RRLLRT 541 (562)
Q Consensus 536 ~~~l~~ 541 (562)
+.++..
T Consensus 171 ~~~~~~ 176 (204)
T 1jba_A 171 VEGARR 176 (204)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 999974
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-18 Score=156.46 Aligned_cols=127 Identities=23% Similarity=0.345 Sum_probs=112.3
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-------CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-------~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
+++.+++++|..+| |++|.|+.+||..++...+| ..++..++..+++.+|.|++|.|+|+||+..+...
T Consensus 1 e~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~--- 76 (173)
T 1alv_A 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI--- 76 (173)
T ss_dssp CHHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred CchhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH---
Confidence 36788999999999 99999999999999966335 67788999999999999999999999998776532
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...+ +++.++..+| |+||.|+|+||+.++..
T Consensus 77 ---------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 77 ---------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ---------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3677899999999999999999999997665 3888999999 99999999999988864
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-18 Score=154.98 Aligned_cols=138 Identities=25% Similarity=0.393 Sum_probs=115.0
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.++.+.|+.+ |++|.|+..||..++....+...+..++..+|+.+|.|++|.|+|+||+..+.......
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~- 89 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT- 89 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC-
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCC-
Confidence 457788877777777664 78999999999999966333447889999999999999999999999998876543221
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
....++.+|+.+|.|++|+|+.+||..++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 90 -----~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~ 164 (183)
T 1s6c_A 90 -----VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 164 (183)
T ss_dssp -----HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred -----HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 13578889999999999999999999988654 2 378899999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
+|..
T Consensus 165 ~~~~ 168 (183)
T 1s6c_A 165 SXQE 168 (183)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9875
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-18 Score=162.37 Aligned_cols=145 Identities=23% Similarity=0.433 Sum_probs=116.6
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..+|.|++|.|+.+||..++ . +|..+.. ..+++.+|.+++|.|+|+||+..+........
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~-lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~ 95 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-E-LAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIED 95 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-H-HHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-H-cCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccc
Confidence 46789999999999999999999999999999865 3 5655543 46889999999999999999988765432111
Q ss_pred cc----------cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-C------CHHHH----HHHhcCCCCCcccHHH
Q 008547 476 HD----------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPL----LEEADIDKDGRISLSE 534 (562)
Q Consensus 476 ~~----------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~----~~~~D~d~dG~i~~~e 534 (562)
.. .......++.+|+.||+|++|+|+.+||+.++... + ++..+ |..+|.|+||.|+|+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E 175 (208)
T 2ct9_A 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE 175 (208)
T ss_dssp ----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred hhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 00 00134678999999999999999999999999864 5 24454 9999999999999999
Q ss_pred HHHHHHhcccc
Q 008547 535 FRRLLRTASIS 545 (562)
Q Consensus 535 F~~~l~~~~~~ 545 (562)
|+.+|....+.
T Consensus 176 F~~~~~~~~~~ 186 (208)
T 2ct9_A 176 FVKVLEKVDVE 186 (208)
T ss_dssp HHHTTTTSCGG
T ss_pred HHHHHhccChH
Confidence 99999875443
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.73 E-value=9.6e-18 Score=158.99 Aligned_cols=140 Identities=27% Similarity=0.415 Sum_probs=116.4
Q ss_pred cccchHHhhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 396 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
..++++++.++.++|..+|.| ++|.|+.+||..+|.. .....+..+..+|..+|.|++|.|+|+||+..+......
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 117 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPN 117 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccC
Confidence 468899999999999999999 9999999999999954 334445677889999999999999999999877654321
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc----ccC------C----HHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKG------S----IDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~----~~~------~----~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
.. ....++.+|+.||.|++|+|+.+||..++. ..+ + +..+|+.+|.|+||.|+|+||+.+|
T Consensus 118 ~~-----~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~ 192 (226)
T 2zfd_A 118 AP-----IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192 (226)
T ss_dssp SC-----HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHH
T ss_pred CC-----HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 11 135788999999999999999999999984 223 1 3556779999999999999999999
Q ss_pred Hhc
Q 008547 540 RTA 542 (562)
Q Consensus 540 ~~~ 542 (562)
...
T Consensus 193 ~~~ 195 (226)
T 2zfd_A 193 LRH 195 (226)
T ss_dssp HHS
T ss_pred HhC
Confidence 864
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-18 Score=171.07 Aligned_cols=141 Identities=18% Similarity=0.236 Sum_probs=99.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC-----------ch--------hhHHHHHHHHHHHHHccCCC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----------LP--------IAVEDVKREVKILQALAGHE 157 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----------~~--------~~~~~~~~E~~~l~~l~~hp 157 (562)
-|.++..||.|+||.||+|.+ .+|+.||||++...... .. .......+|...|.+|. ++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 389999999999999999986 46999999987532110 00 01112346788888884 44
Q ss_pred Ccc--eEEEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC
Q 008547 158 NVV--KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235 (562)
Q Consensus 158 ~iv--~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~ 235 (562)
++. ..++. .. .+|||||++|++|.... ..+.+..++.||+.+|.+||++|||||||||.|||++..
T Consensus 174 gv~vp~p~~~--~~--~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 174 GFPVPEPIAQ--SR--HTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp TCSCCCEEEE--ET--TEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred CCCCCeeeec--cC--ceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence 432 22322 22 37999999998875422 123456788999999999999999999999999999853
Q ss_pred CCC-------CCeEEeeccCccc
Q 008547 236 KED-------SSLKATDFGLSDF 251 (562)
Q Consensus 236 ~~~-------~~vkl~DfG~a~~ 251 (562)
++. ..+.|+||+-+..
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCcccccccccceEEEEeCCccc
Confidence 210 1388999997653
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.73 E-value=9e-18 Score=154.50 Aligned_cols=133 Identities=20% Similarity=0.362 Sum_probs=111.4
Q ss_pred hhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 404 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 404 ~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
.++.++|..+|.+ ++|.|+.+||..++....+...+...+..+|+.+|.|++|.|+++||...+....... . .
T Consensus 25 ~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~---~---~ 98 (190)
T 2l2e_A 25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGE---L---N 98 (190)
T ss_dssp HHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSC---S---H
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCC---H---H
Confidence 3466678889999 8999999999999976445556778899999999999999999999998876543211 1 3
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhccc------------------CCHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
..++.+|+.+|.|++|+|+.+||..++... .++..+|..+|.|+||.|+|+||+.++...
T Consensus 99 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 176 (190)
T 2l2e_A 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD 176 (190)
T ss_dssp HHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC
T ss_pred HHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 478889999999999999999999988651 138899999999999999999999999753
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=156.75 Aligned_cols=138 Identities=25% Similarity=0.364 Sum_probs=114.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
..++++++.++.+.|+.. +++|.|+.+||..++.. ++ ...+..++..+|+.+|.|++|.|+|+||+..+.......
T Consensus 46 ~~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~ 122 (224)
T 1s1e_A 46 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT 122 (224)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCC
T ss_pred cCCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCC
Confidence 347787777776666654 58999999999999965 54 347889999999999999999999999998876544221
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHH
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFR 536 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~ 536 (562)
....++.+|+.||.|++|+|+.+||..++... | +++.+|+.+|.|+||.|+|+||+
T Consensus 123 ------~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~ 196 (224)
T 1s1e_A 123 ------VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL 196 (224)
T ss_dssp ------HHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred ------HHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 13578889999999999999999999988653 1 38899999999999999999999
Q ss_pred HHHHhc
Q 008547 537 RLLRTA 542 (562)
Q Consensus 537 ~~l~~~ 542 (562)
.++...
T Consensus 197 ~~~~~~ 202 (224)
T 1s1e_A 197 ESCQED 202 (224)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=155.83 Aligned_cols=140 Identities=25% Similarity=0.418 Sum_probs=116.4
Q ss_pred cccchHHhhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 396 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
..++++++.++.++|..+|.| ++|.|+.+||..+|.. .....+..+..+|..+|.|++|.|+|+||+..+......
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~ 106 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPS 106 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTT
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccC
Confidence 468899999999999999999 9999999999999954 334445677889999999999999999999887654321
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc----ccC------C----HHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKG------S----IDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~----~~~------~----~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
.. ....++.+|+.||.|++|+|+.+||..++. ..+ + +..+|..+|.|+||.|+|+||+.+|
T Consensus 107 ~~-----~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 181 (207)
T 2ehb_A 107 AP-----VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181 (207)
T ss_dssp SC-----HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred CC-----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 11 135788999999999999999999999884 222 1 4566779999999999999999999
Q ss_pred Hhc
Q 008547 540 RTA 542 (562)
Q Consensus 540 ~~~ 542 (562)
...
T Consensus 182 ~~~ 184 (207)
T 2ehb_A 182 SLN 184 (207)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-18 Score=155.83 Aligned_cols=128 Identities=18% Similarity=0.325 Sum_probs=113.4
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-----cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
.++.++.++++ |..+|.|++|.|+.+||..++.. ++. .++..++..+++.+|.|++|.|+|+||+..+...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence 55678889999 99999999999999999999965 665 5789999999999999999999999999776532
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+ |+||.|+|+||+.++..
T Consensus 103 ----------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 103 ----------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp ----------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 3677899999999999999999999998776 388899988 89999999999998865
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-18 Score=148.72 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=112.2
Q ss_pred hHHhhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 400 DEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
-+++.+++++|..+|.|+ +|.|+..||..++.. +|..++..++..++..+|.+ |+|+||+..+........ .
T Consensus 10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~--~ 82 (146)
T 2qac_A 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKD--N 82 (146)
T ss_dssp HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTC--C
T ss_pred HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcc--h
Confidence 456788999999999999 999999999999955 89999999999999999977 999999987764322111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+ |+||.|+|+||+.+|.
T Consensus 83 ---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 83 ---VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp ---HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred ---HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 34788899999999999999999999998776 388899998 9999999999999985
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=156.21 Aligned_cols=132 Identities=24% Similarity=0.341 Sum_probs=106.7
Q ss_pred hhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCccc-HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHH
Q 008547 403 LADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLK-ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480 (562)
Q Consensus 403 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~-~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~ 480 (562)
..++.++|..||.+ ++|.|+.+||..++. .++..+. ..++..+|..+|.|++|.|+|+||+..+.......
T Consensus 18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~-~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~------ 90 (211)
T 2ggz_A 18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLG-LQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK------ 90 (211)
T ss_dssp ------CCCSHHHHCTTSEEEHHHHHHHTT-CCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSS------
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHH-HhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCc------
Confidence 34568889999988 899999999999994 4776654 45699999999999999999999998876543211
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 481 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
....++.+|+.||.|++|+|+.+||..++...+ .++.+|..+|.|+||.|+|+||+.++..
T Consensus 91 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 91 MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 135788899999999999999999999886542 2788999999999999999999998874
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=152.48 Aligned_cols=136 Identities=24% Similarity=0.368 Sum_probs=113.7
Q ss_pred cccchHHhhhhccccccccC-----CC-C--CCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcc-cchhhHHHH
Q 008547 396 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA 466 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~ef~~~ 466 (562)
+.++++++.++.++|..+|. |+ + |.|+..||.. + ..+|..++.. .++..+|.+++|. |+|+||+..
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l-~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~ 86 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFKE---RICRVFSTSPAKDSLSFEDFLDL 86 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-S-TTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-H-HhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHH
Confidence 46789999999999999999 68 8 9999999999 7 4588777654 5788899999999 999999988
Q ss_pred HhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------CHH----HHHHHhcCCCCCccc
Q 008547 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRIS 531 (562)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i~ 531 (562)
+........ ....++.+|+.||+|++|+|+.+||+.++...+ ++. .+|..+|.|+||.|+
T Consensus 87 ~~~~~~~~~-----~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~ 161 (183)
T 1dgu_A 87 LSVFSDTAT-----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 161 (183)
T ss_dssp HHHHSTTCC-----HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEE
T ss_pred HHHhcCCCC-----HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEc
Confidence 765432211 124788999999999999999999999986543 233 499999999999999
Q ss_pred HHHHHHHHHh
Q 008547 532 LSEFRRLLRT 541 (562)
Q Consensus 532 ~~eF~~~l~~ 541 (562)
|+||+.+|..
T Consensus 162 ~~EF~~~~~~ 171 (183)
T 1dgu_A 162 LSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=154.72 Aligned_cols=133 Identities=23% Similarity=0.338 Sum_probs=111.8
Q ss_pred HhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccH-HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 402 ELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
...++.++|..||.+ ++|.|+..||..++. .++..+.. ..+..+|..+|.|++|.|+|+||+..+.......
T Consensus 12 ~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~----- 85 (198)
T 2r2i_A 12 SATECHQWYKKFMTECPSGQLTLYEFKQFFG-LKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGK----- 85 (198)
T ss_dssp HTSCHHHHHHHHHHHCTTSEECHHHHHHHHT-CCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCC-----
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHH-HhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCc-----
Confidence 345677889999988 899999999999994 47776654 4599999999999999999999998876543211
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
....++.+|+.||.|++|+|+.+||..++...+ .+..+|..+|.|+||.|+|+||+.+|..
T Consensus 86 -~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 86 -VDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp -HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred -hHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 135788899999999999999999999987552 1788999999999999999999999874
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=151.83 Aligned_cols=131 Identities=15% Similarity=0.253 Sum_probs=108.5
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcC---CCCCcccchhhHHHHHhhhhhhcc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID---CNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d---~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
...++.+++++|..+| ++|.|+.+||..++ |..+++..+..++..+| .+++|.|+|+||...+..+..
T Consensus 23 ~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l----g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~--- 93 (179)
T 3a8r_A 23 GNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI----GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTD--- 93 (179)
T ss_dssp CCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH----TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHC---
T ss_pred chhhHHHHHHHHhccC--CCCCCcHHHHHHHH----CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcC---
Confidence 3356788999999999 89999999999854 66778888999999887 467889999999987654321
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc-ccC-------------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG-LKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~-~~~-------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.. ....++.+|+.||+|+||+|+.+||+.++. ..+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 94 ~~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 94 QG---FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp CC---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred CC---HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 11 235789999999999999999999999887 322 4788999999999999999999999975
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-18 Score=158.47 Aligned_cols=148 Identities=18% Similarity=0.228 Sum_probs=120.1
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhh-----CCCcccHHHHHHH---------HHhcCCCCCcccch
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD-----LPWKLKESRVLEI---------LQAIDCNTDGLVDF 460 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-----~~~~~~~~~~~~l---------~~~~d~~~~g~I~~ 460 (562)
...++++++.+++++|..+|.|++|.|+.+||..++... +|..++..++..+ |+.+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 345678899999999999999999999999999999542 4888888899888 49999999999999
Q ss_pred hhHHHHHhhhhhhcccccHHHHHHHHHHH--HHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccH
Q 008547 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAF--EKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 532 (562)
Q Consensus 461 ~ef~~~~~~~~~~~~~~~~~~~~~~~~~F--~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 532 (562)
+| ..+...... ......+..+| ..||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|
T Consensus 85 ~E--~~~~~~~~~-----~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~ 157 (186)
T 2hps_A 85 AT--DSLLKMKGE-----EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157 (186)
T ss_dssp HH--HHHHHCCTH-----HHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEH
T ss_pred HH--HHHHHhcCC-----hHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcH
Confidence 99 333322111 11122445566 888999999999999999997766 3899999999999999999
Q ss_pred HHHHHHHHhccccCCCC
Q 008547 533 SEFRRLLRTASISSRNV 549 (562)
Q Consensus 533 ~eF~~~l~~~~~~~~~~ 549 (562)
+||+.+|.....+..+.
T Consensus 158 ~ef~~~~~~~~~~~~~~ 174 (186)
T 2hps_A 158 DEFLVTVNDFLFGLEET 174 (186)
T ss_dssp HHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999999876655543
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-17 Score=146.14 Aligned_cols=119 Identities=18% Similarity=0.321 Sum_probs=105.3
Q ss_pred cccccccCCCCCCCCHHHHHHHHHhhCCC-----cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 408 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 408 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
+.|..+|.|++|.|+.+||..++.. +|. .++..++..+++.+|.|++|.|+|+||+..+...
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------ 71 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------------ 71 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHH-HTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------------
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHh-hcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------
Confidence 3588999999999999999999965 665 6789999999999999999999999999876532
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...+ ++..++..+ |+||.|+|+||+.++..
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 134 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK 134 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence 3677899999999999999999999998776 388899988 89999999999998864
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=163.68 Aligned_cols=129 Identities=23% Similarity=0.345 Sum_probs=115.5
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHH-HHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~-l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
.....+..+|..+|.|++|+|+.+||..+| +|..++..++.. ++..+|.+++|.|+|+||+..+....
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------- 253 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------- 253 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--------
Confidence 567789999999999999999999999998 577788889999 99999999999999999998766432
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHh-cccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l-~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
.+..+|+.||.|++|+|+.+||..++ ...| ++..+|..+|.|+||.|+|+||+.+|.....
T Consensus 254 ----~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~~ 321 (323)
T 1ij5_A 254 ----VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFH 321 (323)
T ss_dssp ----HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC-
T ss_pred ----HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhcC
Confidence 56779999999999999999999999 6665 5999999999999999999999999987544
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=148.18 Aligned_cols=113 Identities=16% Similarity=0.217 Sum_probs=98.8
Q ss_pred cCCCCCCCCHHHHHHHHHhhC------CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHH
Q 008547 414 DVDKNGSISLEEMRQALAKDL------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 487 (562)
Q Consensus 414 D~~~~G~i~~~el~~~l~~~~------~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~ 487 (562)
++|++|.|+..||..+|.. + |..++.+++..++..+|.|++|.|+|+||+.++... .+++.
T Consensus 14 ~~~~dG~I~~~EL~~~l~~-l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------------~~l~~ 80 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQ-ELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------------VHYQH 80 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHH-HHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------------HHHHH
T ss_pred cCCCCCcCCHHHHHHHHHH-HHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------HHHHH
Confidence 6799999999999999965 5 667888999999999999999999999999765432 36778
Q ss_pred HHHHhcCCCCCccCHHHHHHHhccc----C------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 488 AFEKFDIDRDGFITPEELRMHTGLK----G------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 488 ~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+|+.|| |++|+|+.+||+.++... + +++.++..+| |+||.|+|+||+.+|..
T Consensus 81 aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 81 VFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp HHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred HHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 999999 999999999999999887 6 3888999999 99999999999998875
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-17 Score=152.46 Aligned_cols=137 Identities=22% Similarity=0.388 Sum_probs=112.0
Q ss_pred ccchHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 397 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
.+++++ +.++|..||.+ ++|.|+.+||..++....+...+...+..+|..+|.|++|.|+|+||...+.......
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~- 96 (190)
T 1g8i_A 21 YFTEKE---VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGT- 96 (190)
T ss_dssp SSCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCC-
T ss_pred CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCC-
Confidence 455544 55566667776 8999999999999976545556778899999999999999999999998876543221
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
....++.+|+.+|.|++|+|+.+||..++... | ++..+|..+|.|+||.|+|+||+.
T Consensus 97 -----~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~ 171 (190)
T 1g8i_A 97 -----LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 171 (190)
T ss_dssp -----HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred -----HHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHH
Confidence 13578889999999999999999999988762 1 388899999999999999999999
Q ss_pred HHHhc
Q 008547 538 LLRTA 542 (562)
Q Consensus 538 ~l~~~ 542 (562)
++...
T Consensus 172 ~~~~~ 176 (190)
T 1g8i_A 172 GSKAD 176 (190)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99763
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-17 Score=146.04 Aligned_cols=119 Identities=18% Similarity=0.312 Sum_probs=105.4
Q ss_pred cccccccCCCCCCCCHHHHHHHHHhhCCC-----cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 408 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 408 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
..|..+|.|++|.|+.+||..++.. +|. .++..++..+++.+|.+++|.|+|+||+..+...
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------ 69 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------------ 69 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------------
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHH-hccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------------
Confidence 3588999999999999999999955 675 6789999999999999999999999999766532
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...+ ++..++..+ |+||.|+|+||+.++..
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 3677899999999999999999999998776 488899988 89999999999998875
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-17 Score=153.46 Aligned_cols=131 Identities=19% Similarity=0.257 Sum_probs=109.7
Q ss_pred hhccccccccCC-CCCCCCHHHHHHHHHhhCCC-cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 405 DLRDQFDAIDVD-KNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 405 ~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
++.++|..||.+ ++|.|+.+||..++.. ++. ..+..++..+|+.+|.|++|.|+|+||+..+........ .
T Consensus 34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~------~ 106 (207)
T 2d8n_A 34 ELCSWYQSFLKDCPTGRITQQQFQSIYAK-FFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKT------N 106 (207)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHH-TCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSS------S
T ss_pred HHHHHHHHHHhhCCCCCCCHHHHHHHHHH-hccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCH------H
Confidence 455567777777 7999999999999966 554 377889999999999999999999999988765432211 1
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhccc----C----------------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
..++.+|+.||+|++|+|+.+||..++... + +++.+|..+|.|+||.|+|+||+.+|...
T Consensus 107 ~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 367789999999999999999999988764 3 28899999999999999999999999864
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-17 Score=156.39 Aligned_cols=138 Identities=23% Similarity=0.357 Sum_probs=113.1
Q ss_pred ccccchHHhhhhccccccccC-----CC-C--CCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcc-cchhhHHH
Q 008547 395 ASTLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVA 465 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~ef~~ 465 (562)
.+.++++++.++.+.|..+|. |+ + |.|+.+||.. +. .++..+.. ..+|+.+|.|++|. |+|+||+.
T Consensus 42 ~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~-~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~ 116 (214)
T 2l4h_A 42 LTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LP-ELKANPFK---ERICRVFSTSPAKDSLSFEDFLD 116 (214)
T ss_dssp CCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CH-HHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hh-ccCCChHH---HHHHHHhCcCCCCCEecHHHHHH
Confidence 357899999999999999998 55 6 9999999998 63 36666654 46788999999999 99999998
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------CHH----HHHHHhcCCCCCcc
Q 008547 466 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRI 530 (562)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i 530 (562)
.+........ ....++.+|+.||.|++|+|+.+||+.++...+ +++ .+|..+|.|+||.|
T Consensus 117 ~~~~~~~~~~-----~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~I 191 (214)
T 2l4h_A 117 LLSVFSDTAT-----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 191 (214)
T ss_dssp HHHHTSSCSC-----HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSB
T ss_pred HHHHHcCCCC-----HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcC
Confidence 8765432211 135788999999999999999999999885431 233 59999999999999
Q ss_pred cHHHHHHHHHhc
Q 008547 531 SLSEFRRLLRTA 542 (562)
Q Consensus 531 ~~~eF~~~l~~~ 542 (562)
+|+||+.++...
T Consensus 192 s~~EF~~~~~~~ 203 (214)
T 2l4h_A 192 NLSEFQHVISRS 203 (214)
T ss_dssp CSHHHHHHHHTC
T ss_pred CHHHHHHHHHhC
Confidence 999999999853
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.9e-17 Score=149.89 Aligned_cols=135 Identities=22% Similarity=0.407 Sum_probs=110.0
Q ss_pred ccchHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCc-ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 397 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.++++++ .++|..||.+ ++|.|+.+||..++.. ++.. .....+..+|..+|.|++|.|+|+||...+.......
T Consensus 21 ~~~~~~i---~~~f~~fd~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 96 (193)
T 1bjf_A 21 DFTEHEI---QEWYKGFLRDCPSGHLSMEEFKKIYGN-FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK 96 (193)
T ss_dssp SCCHHHH---HHHHHHHHHHSTTSEEEHHHHHHHHTT-TSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred CCCHHHH---HHHHHHHHHHCCCCCcCHHHHHHHHHH-hcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC
Confidence 4566554 4567778887 8999999999999954 5543 3567889999999999999999999998776543211
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHH
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFR 536 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~ 536 (562)
....++.+|+.||.|++|+|+.+||..++... + .+..+|..+|.|+||.|+|+||+
T Consensus 97 ------~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 170 (193)
T 1bjf_A 97 ------LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170 (193)
T ss_dssp ------HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred ------HHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence 13578889999999999999999999988541 2 18889999999999999999999
Q ss_pred HHHHh
Q 008547 537 RLLRT 541 (562)
Q Consensus 537 ~~l~~ 541 (562)
.++..
T Consensus 171 ~~~~~ 175 (193)
T 1bjf_A 171 RGAKS 175 (193)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99874
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=146.40 Aligned_cols=136 Identities=22% Similarity=0.390 Sum_probs=110.1
Q ss_pred ccchHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 397 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
.++++++.++ |..||.+ ++|.|+.+||..++....+...+...+..+|..+|.|++|.|+++||...+........
T Consensus 21 ~~~~~~i~~~---~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREIQQW---HKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHHHHH---HHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHHHHH---HHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 4666665555 5555554 89999999999999664344456678999999999999999999999988765432211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
...++.+|+.+|.|++|+|+.+||..++... + ++..+|+.+|.|+||.|+|+||+.
T Consensus 98 ------~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 171 (190)
T 1fpw_A 98 ------EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp ------THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred ------HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 2467889999999999999999999988651 1 378899999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
++..
T Consensus 172 ~~~~ 175 (190)
T 1fpw_A 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 9985
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-16 Score=152.79 Aligned_cols=138 Identities=21% Similarity=0.358 Sum_probs=114.3
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++..+.+.|+. .+++|.|+.+||..++....+...+...+..+|..+|.|++|.|+|+||+..+.......
T Consensus 86 ~~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~- 162 (256)
T 2jul_A 86 TKFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGT- 162 (256)
T ss_dssp TTSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCC-
T ss_pred hCCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccC-
Confidence 34677777777665553 248999999999999976555677888999999999999999999999998876543211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C--------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
....++.+|+.||.|++|+|+.+||..++... | +++.+|..+|.|+||.|+|+||+.
T Consensus 163 -----~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~ 237 (256)
T 2jul_A 163 -----VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLE 237 (256)
T ss_dssp -----HHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHH
T ss_pred -----hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence 13578889999999999999999999988643 2 388999999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
++..
T Consensus 238 ~~~~ 241 (256)
T 2jul_A 238 TCQK 241 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-17 Score=157.79 Aligned_cols=141 Identities=19% Similarity=0.272 Sum_probs=115.3
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccH------HHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE------SRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~------~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.+++.+..+++++|..+|.|++|.|+..||..++.. +|..++. ..+..++..+|.+++|.|+|+||+..+...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQE-LLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHH-HHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-HHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 467778889999999999999999999999999954 6655554 788999999999999999999999876432
Q ss_pred hh------hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C------CHHH----HHHHhcCCCCCcc
Q 008547 471 HQ------LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------SIDP----LLEEADIDKDGRI 530 (562)
Q Consensus 471 ~~------~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~----~~~~~D~d~dG~i 530 (562)
.. ..... ....++.+|+.||+|++|+|+.+||..++... + ++.. +|..+|.|+||.|
T Consensus 88 ~~~~~~~~~~~~~---~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i 164 (263)
T 2f33_A 88 ENFLLLFRCQQLK---SCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKL 164 (263)
T ss_dssp TTHHHHHGGGTSS---CHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCB
T ss_pred hhHHHHHHHhhcc---HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeE
Confidence 00 01111 13478899999999999999999999998755 3 2443 9999999999999
Q ss_pred cHHHHHHHHHh
Q 008547 531 SLSEFRRLLRT 541 (562)
Q Consensus 531 ~~~eF~~~l~~ 541 (562)
+|+||+.++..
T Consensus 165 ~~~ef~~~~~~ 175 (263)
T 2f33_A 165 ELTEMARLLPV 175 (263)
T ss_dssp CHHHHHHHSCT
T ss_pred cHHHHHHHHHH
Confidence 99999998763
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=153.57 Aligned_cols=137 Identities=20% Similarity=0.309 Sum_probs=111.8
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhC---CCcccHHHHHH----HHHhcCCCCCcccchhhHHHHHhhh----
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHV---- 470 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~~~~~~----l~~~~d~~~~g~I~~~ef~~~~~~~---- 470 (562)
...++..+|..+|.|++|.|+.+||..++.... |..++..++.. ++..+|.+++|.|+|+||+..+...
T Consensus 101 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 101 SCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp CHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 345688999999999999999999999996522 88888888877 9999999999999999998766431
Q ss_pred -hhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----------CCHHHHHHH-hcCCCCCcccHHHHHHH
Q 008547 471 -HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----------GSIDPLLEE-ADIDKDGRISLSEFRRL 538 (562)
Q Consensus 471 -~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----------~~~~~~~~~-~D~d~dG~i~~~eF~~~ 538 (562)
........ ...++.+|+.||+|++|+|+.+||+.++... .+++.++.. +|.|+||.|+|+||+.+
T Consensus 181 ~~~~~~~~~---~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~ 257 (263)
T 2f33_A 181 LKFQGIKMC---GKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALI 257 (263)
T ss_dssp HHHHHTCCC---HHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHH
T ss_pred HHhcCcchH---HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHH
Confidence 00001111 3478889999999999999999999988532 258888887 79999999999999999
Q ss_pred HHh
Q 008547 539 LRT 541 (562)
Q Consensus 539 l~~ 541 (562)
|..
T Consensus 258 ~~~ 260 (263)
T 2f33_A 258 LSA 260 (263)
T ss_dssp HCC
T ss_pred Hhc
Confidence 975
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.62 E-value=7.5e-16 Score=169.39 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=117.4
Q ss_pred ccchHH-hhhhccccccccCCCCCCCCHHHHHHHHHhhC-------CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 397 TLDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 397 ~~~~~~-~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~-------~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
.+++++ ..+++++|..+| |++|.|+.+||..+|...+ +..++.+++..++..+|.|++|.|+|+||+..+.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367777 889999999999 9999999999999997642 6788999999999999999999999999998765
Q ss_pred hhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.. ..++.+|+.||+|++|+|+.+||+.+|...+ +++.+|..+| |+||.|+|+||+.+|..
T Consensus 603 ~~------------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 603 KI------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp HH------------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred HH------------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 43 3677899999999999999999999998776 4899999999 99999999999998874
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-16 Score=154.62 Aligned_cols=139 Identities=22% Similarity=0.329 Sum_probs=109.5
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhC---CCcccHHHHHH----HHHhcCCCCCcccchhhHHHHHhhhhh---
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHVHQ--- 472 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~~~~~~----l~~~~d~~~~g~I~~~ef~~~~~~~~~--- 472 (562)
..++..+|..+|.|++|.|+.+||..++.... |..++..++.. +|..+|.|++|.|+|+||+..+.....
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 45688999999999999999999999996532 77788777654 999999999999999999865532100
Q ss_pred -hc--ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----------CHHH----HHHHhcCCCCCcccHHHH
Q 008547 473 -LE--EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDP----LLEEADIDKDGRISLSEF 535 (562)
Q Consensus 473 -~~--~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~----~~~~~D~d~dG~i~~~eF 535 (562)
.. ..........++.+|+.||+|++|+|+.+||+.++...+ +++. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 00 001112245788999999999999999999999886432 2444 999999999999999999
Q ss_pred HHHHHh
Q 008547 536 RRLLRT 541 (562)
Q Consensus 536 ~~~l~~ 541 (562)
+.+|..
T Consensus 263 ~~~~~~ 268 (272)
T 2be4_A 263 ALCLGL 268 (272)
T ss_dssp HHHTTC
T ss_pred HHHHcc
Confidence 999973
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-16 Score=153.24 Aligned_cols=142 Identities=25% Similarity=0.407 Sum_probs=113.7
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHh---hCCC--cccHHHHHHH----HHhcCCCCCcccchhhHHHHH
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPW--KLKESRVLEI----LQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~---~~~~--~~~~~~~~~l----~~~~d~~~~g~I~~~ef~~~~ 467 (562)
.+++.+..+++++|..+|.|++|.|+..||..+|.. .+|. .++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 455667788999999999999999999999999952 4788 8888888764 477899999999999999874
Q ss_pred hh--------hhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C------C----HHHHHHHhcCC
Q 008547 468 LH--------VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------S----IDPLLEEADID 525 (562)
Q Consensus 468 ~~--------~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~----~~~~~~~~D~d 525 (562)
.. ......... ...++.+|+.||+|++|+|+.+||..++... + + +..+|..+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~ 160 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDN---SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKN 160 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCC---HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSS
T ss_pred hhhhHHHHHHHhhccCccc---HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccC
Confidence 32 111101111 3478889999999999999999999998754 3 1 34599999999
Q ss_pred CCCcccHHHHHHHHHh
Q 008547 526 KDGRISLSEFRRLLRT 541 (562)
Q Consensus 526 ~dG~i~~~eF~~~l~~ 541 (562)
+||.|+|+||+.++..
T Consensus 161 ~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 161 KDGRLDLNDLARILAL 176 (272)
T ss_dssp CSSEEEHHHHGGGSCC
T ss_pred CCCcCcHHHHHHHHhh
Confidence 9999999999988753
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.8e-15 Score=122.76 Aligned_cols=97 Identities=26% Similarity=0.358 Sum_probs=84.3
Q ss_pred hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 433 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
.+|. +++.++..+++.+| ++|.|+|+||+..+... .. ....++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~-----~~---~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA-----SK---SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GS---CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC-----hh---HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4788 99999999999999 78999999999876421 11 13578899999999999999999999999877
Q ss_pred ---C------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 513 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 513 ---~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+ +++.+|..+|.|+||.|+|+||+.+|.
T Consensus 71 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 71 SPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 388999999999999999999999886
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-15 Score=123.87 Aligned_cols=97 Identities=22% Similarity=0.365 Sum_probs=84.5
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
++..++++++..+++.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 72 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGLS-----SKT---PDQIKKVFGILDQDKSGFIEEEELQLFLKNFS 72 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC-----CCc---HHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh
Confidence 567789999999999999 79999999999876531 111 3578899999999999999999999999887
Q ss_pred --C------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 513 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 513 --~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+ +++.+|..+|.|+||.|+|+||+.+|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 73 SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4 389999999999999999999999986
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.6e-15 Score=123.09 Aligned_cols=98 Identities=27% Similarity=0.397 Sum_probs=84.1
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
++..++++++..+++.+|. +|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 71 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK-----GKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFS 71 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc-----cCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 4566889999999999997 8999999999876531 111 3578899999999999999999999999876
Q ss_pred --C------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 513 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 513 --~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+ +++.+|..+|.|+||.|+|+||+.+|++
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 72 AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 4 3899999999999999999999999975
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.3e-15 Score=123.45 Aligned_cols=99 Identities=28% Similarity=0.399 Sum_probs=85.1
Q ss_pred hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 433 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
++|..++..++..+++.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGLK-----AMS---ANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT-----TSC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHccC-----cch---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3577789999999999999 88999999999876321 111 3578899999999999999999999999877
Q ss_pred ---C------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 513 ---G------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 513 ---~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 72 ~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 72 AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 4 3889999999999999999999999874
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-15 Score=122.24 Aligned_cols=98 Identities=24% Similarity=0.376 Sum_probs=85.0
Q ss_pred hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 433 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
.+|..+++.++..++..+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT-----AKS---ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC-----hhh---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3788999999999999999 88999999999876421 111 3578899999999999999999999999876
Q ss_pred ---C------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 513 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 513 ---~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+ +++.+|..+|.|+||.|+|+||+.+|.
T Consensus 72 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 72 SAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp STTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 388999999999999999999999885
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-15 Score=171.47 Aligned_cols=142 Identities=20% Similarity=0.316 Sum_probs=122.5
Q ss_pred HhhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 392 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
......+++++..++.++|..||.|++|.|+..||..+|.. +|..+++.++..+|..+|.|++|.|+|+||+..+....
T Consensus 713 ~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 791 (863)
T 1sjj_A 713 TRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLIS-MGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRET 791 (863)
T ss_dssp HCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHH-HTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHS
T ss_pred HhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 34556778889999999999999999999999999999955 89999999999999999999999999999998776543
Q ss_pred hhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCC-----CCCcccHHHHHHHHHh
Q 008547 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID-----KDGRISLSEFRRLLRT 541 (562)
Q Consensus 472 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d-----~dG~i~~~eF~~~l~~ 541 (562)
..... ...+..+|+.| .|++|+|+.+||+.++. ..+++.+|..+|.+ +||.|+|+||+.+|.+
T Consensus 792 ~~~~~-----~~~l~~aF~~~-~d~~G~Is~~El~~~l~-~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 792 ADTDT-----ADQVMASFKIL-AGDKNYITVDELRRELP-PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp TTCSS-----SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred cCCCC-----HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 21111 23678899999 89999999999999996 33589999999987 7999999999999975
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.54 E-value=6.2e-15 Score=122.31 Aligned_cols=98 Identities=21% Similarity=0.280 Sum_probs=83.6
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
+|..+++.++..+++.+| ++|.|+|+||+..+... .. ....++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~---~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK-----KK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFS 71 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG-----GS---CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC-----cc---hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHh
Confidence 455678999999999999 89999999999876421 11 13578899999999999999999999999876
Q ss_pred --C------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 513 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 513 --~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 72 SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 3 3889999999999999999999999874
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-15 Score=162.08 Aligned_cols=129 Identities=15% Similarity=0.162 Sum_probs=59.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..++++|..||.|++|.|+.+||..+|.. +|..++++++..+|+.+|.|++|.|+|+||+.++..... ..
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~-lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---------~~ 80 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKE-LNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---------RA 80 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHTC---------CH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---------HH
Confidence 46899999999999999999999999954 898999999999999999999999999999988765421 13
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhccc-C-------CHHHHHHHhcCC----CCCcccHHHHHHHHHhcc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLK-G-------SIDPLLEEADID----KDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~-------~~~~~~~~~D~d----~dG~i~~~eF~~~l~~~~ 543 (562)
+++++|+.||++ +|+|+.+||+.+|... + +++++|+.+|.| +||.|+|+||..+|....
T Consensus 81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 678899999985 9999999999999743 2 388999999998 799999999999998643
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=134.05 Aligned_cols=138 Identities=17% Similarity=0.260 Sum_probs=111.6
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
..+.....+.++|..+|.|++|.|+..||..++.. ++.....+++..+|+.+|.|++|.|+++||..++..........
T Consensus 51 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~ 129 (211)
T 2ggz_A 51 LNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNL-IMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQ 129 (211)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCC
T ss_pred CCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-hccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCc
Confidence 34455567889999999999999999999999965 56667788999999999999999999999998876543211001
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.......+..+|+.+|.|++|.|+.+||..++....++.++|.. .++|+||+.+|.+..
T Consensus 130 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-------~~d~~~f~~~~~~~~ 188 (211)
T 2ggz_A 130 TLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK-------SFDFSNVLRVICNGK 188 (211)
T ss_dssp SCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH-------HSCTTHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc-------cCCHHHHHHHHhcCC
Confidence 11112457889999999999999999999999988889999984 344999999999865
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=120.36 Aligned_cols=97 Identities=21% Similarity=0.315 Sum_probs=82.9
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
++..+++.++..+++.+| ++|.|+|+||+..+... . .. ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS----K-MS---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ 71 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG----G-SC---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC----c-cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence 456778899999999998 88999999999876321 1 11 3578899999999999999999999999877
Q ss_pred --C------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 513 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 513 --~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+ +++.+|..+|.|+||.|+|+||+.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 3 388999999999999999999999885
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-14 Score=130.85 Aligned_cols=125 Identities=20% Similarity=0.201 Sum_probs=107.1
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~---~~---~~ 129 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQ---VS---EQ 129 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCC---CC---HH
Confidence 34566788899999999999999999854 3688999999999999999999999877654221 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCc--ccHHHHHHHHHh
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGR--ISLSEFRRLLRT 541 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~--i~~~eF~~~l~~ 541 (562)
.+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||. ++|+||+.++..
T Consensus 130 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 130 TFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 6788999999999999999999999988778899999999999999 789999998864
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=124.13 Aligned_cols=98 Identities=20% Similarity=0.313 Sum_probs=61.5
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------- 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------- 513 (562)
..+..+|+.+|.|++|.|+|+||+..+...... ......++.+|+.||+|++|+|+.+||+.++...+
T Consensus 3 p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~-----~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 77 (135)
T 3h4s_E 3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMDV-----EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKE 77 (135)
T ss_dssp ----------------CCCC-----------CH-----HHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHH
T ss_pred hhHHHHHHHHcCCCCCcEeHHHHHHHHHHHccc-----cchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHH
Confidence 455789999999999999999999876543221 12245788999999999999999999999998777
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
+++.+|..+|.|+||.|+|+||+.+|....
T Consensus 78 e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 78 DAQGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 289999999999999999999999998753
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.49 E-value=6.7e-14 Score=126.24 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=105.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++..+|..+|.+++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||...+...... .. ...
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~ 111 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR---LS---DQF 111 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC---CC---HHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCC---CC---HHH
Confidence 4556678889999999999999998854 3678999999999999999999999877654211 11 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCccc--HHHHHHHHHh
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRIS--LSEFRRLLRT 541 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~--~~eF~~~l~~ 541 (562)
+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||.|+ |+||+.++..
T Consensus 112 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 112 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 78899999999999999999999998777789999999999999995 8999988764
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-14 Score=163.20 Aligned_cols=125 Identities=19% Similarity=0.304 Sum_probs=100.9
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC--------cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
+..+++++|..+| +++|.|+.+||..+|.. ++. .++.+++..+++.+|.|++|.|+|+||+..+...
T Consensus 532 ~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~--- 606 (900)
T 1qxp_A 532 IDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI--- 606 (900)
T ss_dssp ---------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH---
T ss_pred HHHHHHHHHHHHc-CCCCcCCHHHHHHHHHH-hhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---
Confidence 3789999999999 99999999999999854 543 7889999999999999999999999999876543
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+| |+||.|+|+||+.+|..
T Consensus 607 ---------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 607 ---------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp ---------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred ---------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 3678899999999999999999999998776 4889999999 99999999999988864
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-14 Score=131.93 Aligned_cols=125 Identities=21% Similarity=0.289 Sum_probs=96.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc------ccc
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHD 477 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~------~~~ 477 (562)
..+..+|..+|.|++|.|+..||..++.. ++.......+..+|+.+|.|++|.|+++||..++....... ...
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~ 141 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPED 141 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence 45778899999999999999999999955 66677788999999999999999999999998876532110 111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI 530 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i 530 (562)
.......+..+|+.+|.|++|+|+.+||..++....++.++| .+|.|+||.|
T Consensus 142 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 142 ESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp GSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHHHTT-CC--------
T ss_pred cccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHHHHHHh-ccCCCCCCCC
Confidence 111235688899999999999999999999998888899999 9999999986
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=124.90 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=102.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ..++..+|+.+| |++|.|+.+||..++............ ..
T Consensus 46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~--~~ 115 (174)
T 2i7a_A 46 DECRSLVALMELKVNGRLDQEEFARLWKR-------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS--RE 115 (174)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHH-------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCC--HH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCC--HH
Confidence 35566788899999999999999998854 267889999999 999999999999887654110011101 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCC-cccHHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG-RISLSEFRRLLR 540 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG-~i~~~eF~~~l~ 540 (562)
.+..+++.+| |++|.|+.+||..++.....+.++|+.+|.|++| .++++||+.++.
T Consensus 116 ~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 116 LLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 6778899999 9999999999999988777788999999999999 459999998764
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=127.80 Aligned_cols=123 Identities=17% Similarity=0.238 Sum_probs=104.5
Q ss_pred cccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC-CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHH
Q 008547 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 490 (562)
Q Consensus 412 ~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~ 490 (562)
.++.+++|.|+.+||..++.. ++ ++..++..+|..+|.+ ++|.|+++||..++........ . ...+..+|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~-~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~--~---~~~~~~~f~ 78 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLN-TK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTD--P---KAYAQHVFR 78 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHH-SS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSC--C---HHHHHHHHH
T ss_pred hhccccCCCCCHHHHHHHHHH-cC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCC--c---HHHHHHHHH
Confidence 378899999999999999954 66 5789999999999998 7999999999988765432111 1 246888999
Q ss_pred HhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 491 KFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 491 ~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.+|.|++|.|+.+||..++...+ ++..+|+.+|.|++|.|+++||..++...
T Consensus 79 ~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 79 SFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp HHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 99999999999999999886554 59999999999999999999999999864
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6.7e-15 Score=121.89 Aligned_cols=97 Identities=23% Similarity=0.326 Sum_probs=82.6
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 512 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 512 (562)
++..+++.++..+++.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~-----~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS---KKS-----SSQLKEIFRILDNDQSGFIEEDELKYFLQRFE 71 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT---TCC-----SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHS
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC---ccc-----HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 577789999999999998 88999999999876421 111 1367789999999999999999999988765
Q ss_pred --C------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 513 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 513 --~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+ +++.+|..+|.|+||.|+|+||+.+|+
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 72 SGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 3 589999999999999999999999986
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-13 Score=129.14 Aligned_cols=124 Identities=12% Similarity=0.064 Sum_probs=104.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 87 ~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~---~~---~~ 153 (220)
T 3sjs_A 87 QTALRMMRIFDTDFNGHISFYEFMAMYKF-------MELAYNLFVMNARARSGTLEPHEILPALQQLGFY---IN---QR 153 (220)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCC---CC---HH
Confidence 34566788889999999999999999855 2678999999999999999999999887654321 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHh-cCCCCC------cccHHHHHHHHHh
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA-DIDKDG------RISLSEFRRLLRT 541 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~-D~d~dG------~i~~~eF~~~l~~ 541 (562)
.+..+|+.+| |++|.|+.+||..++.....+.++|+.+ |.+++| .|+|+||+.++..
T Consensus 154 ~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 154 TSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 6778999999 9999999999999998888899999999 999999 8999999998875
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.7e-13 Score=120.83 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=102.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..+..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~---~---~~ 113 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL---N---EH 113 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCC---C---HH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCC---C---HH
Confidence 45666788899999999999999998854 36889999999999999999999998876542211 1 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
.+..+|+.+| |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |..+|.
T Consensus 114 ~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 114 LYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp HHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 6778899999 999999999999999877789999999999999999876 665554
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-12 Score=124.49 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=109.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|.+...+|.|+.+.||++.. .|..+++|+....... ....+.+|+.+++.|..+..++++++++...+..|+||
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 478888899999999999963 4678999988643211 12357899999999976788899999999999999999
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------------------------------------- 217 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~--------------------------------------- 217 (562)
|+++|.+|.+.+ .+......++.++..+|..||+
T Consensus 90 e~i~G~~l~~~~-------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 90 SEADGVLCSEEY-------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp ECCSSEEHHHHC-------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EecCCeehhhcc-------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999887642 1122345788899999999998
Q ss_pred --------------------cCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 218 --------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 218 --------------------~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
..++|+|++|.|||++ +...+.|+||+.+.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhcc
Confidence 4589999999999997 23445699999774
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.36 E-value=6e-13 Score=146.50 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=96.0
Q ss_pred Hhhhhccccc--cccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCC-------CCCcccchhhHHHHHhhhhh
Q 008547 402 ELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC-------NTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 402 ~~~~l~~~F~--~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~-------~~~g~I~~~ef~~~~~~~~~ 472 (562)
....++++|. .||.|++|.|+..||..+|.. .+.++..+++.+|. +++|.|+|+||+.++..+..
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~------~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~ 217 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA------DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP 217 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS------CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh------hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC
Confidence 3467888999 799999999999999998732 36899999999985 78899999999988765421
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-C---------------CHHHHHHHhcCC----CCCcccH
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G---------------SIDPLLEEADID----KDGRISL 532 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~---------------~~~~~~~~~D~d----~dG~i~~ 532 (562)
..+++++|+.||+|++|+|+.+||+.+|... + +++++|+++|.| +||.|+|
T Consensus 218 ---------r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~ 288 (799)
T 2zkm_X 218 ---------RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSP 288 (799)
T ss_dssp ---------CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCH
T ss_pred ---------HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccch
Confidence 1367889999999999999999999999754 2 478999999999 8999999
Q ss_pred HHHHHHHHhc
Q 008547 533 SEFRRLLRTA 542 (562)
Q Consensus 533 ~eF~~~l~~~ 542 (562)
+||.++|...
T Consensus 289 eeF~~~L~S~ 298 (799)
T 2zkm_X 289 EGMVWFLCGP 298 (799)
T ss_dssp HHHHHHHHST
T ss_pred hhhhhcccCc
Confidence 9999999864
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=147.67 Aligned_cols=136 Identities=22% Similarity=0.301 Sum_probs=104.9
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc--------
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-------- 474 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~-------- 474 (562)
+.++..+|..+|.|++|.|+.+||..+|.. +|..+++++++.++..+| |++|.|+|+||+..+.......
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~ 683 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEA-AGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDP 683 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHH-TTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHHH-hCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCC
Confidence 367899999999999999999999999955 899999999999999999 9999999999988765321100
Q ss_pred --cc-------------------------------------ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--
Q 008547 475 --EH-------------------------------------DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 513 (562)
Q Consensus 475 --~~-------------------------------------~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 513 (562)
.. ........++++|+.+|.+ +|.|+.+||+.++...+
T Consensus 684 d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~ 762 (900)
T 1qxp_A 684 ENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTR 762 (900)
T ss_dssp SCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----
T ss_pred CCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccc
Confidence 00 0011234566778888876 88889999999987643
Q ss_pred ------------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 ------------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 ------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.++.+|+.+|.|+||.|+|+||..++..
T Consensus 763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~ 802 (900)
T 1qxp_A 763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802 (900)
T ss_dssp CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence 3788999999999999999999999865
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.9e-12 Score=116.47 Aligned_cols=118 Identities=16% Similarity=0.286 Sum_probs=99.4
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC-CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcC
Q 008547 416 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDI 494 (562)
Q Consensus 416 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 494 (562)
+..|.|+.+++..+... ++ ++..++..+|..+|.+ ++|.|+++||..++........ . ...+..+|+.+|.
T Consensus 3 ~~~~~l~~~el~~~~~~-~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~---~--~~~~~~~f~~~D~ 74 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRS-TR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGD---P--SAFAEYVFNVFDA 74 (190)
T ss_dssp CSSCCSCHHHHHHHHHH-HC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSC---H--HHHHHHHHHHHCS
T ss_pred cccccCCHHHHHHHHHh-cC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCC---c--cHHHHHHHHHhcC
Confidence 45789999999998854 44 4678999999999999 8999999999988765422111 1 2468889999999
Q ss_pred CCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 495 DRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 495 d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
|++|.|+.+||..++...+ ++..+|..+|.|++|.|+++||..++..
T Consensus 75 d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 75 DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 9999999999999998765 3788999999999999999999999876
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=115.24 Aligned_cols=122 Identities=14% Similarity=0.179 Sum_probs=101.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~ 106 (165)
T 1k94_A 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR---LS---PQ 106 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCC---CC---HH
Confidence 45666788899999999999999998854 3788999999999999999999999877654221 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.+..+|..+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |..+|..
T Consensus 107 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~~ 161 (165)
T 1k94_A 107 TLTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFI-YDDFLQG 161 (165)
T ss_dssp HHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEE-HHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeee-HHHHHHH
Confidence 677788888 899999999999999887778999999999999999877 7776654
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.33 E-value=6.9e-13 Score=115.59 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=47.4
Q ss_pred HHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----------
Q 008547 444 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---------- 513 (562)
Q Consensus 444 ~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---------- 513 (562)
..+|..+|.|++|.|+|+||...+......... .......++.+|+.||+|++|+|+.+||+.++...+
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEA-EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccccc-ccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 357777788888888888887665543221100 001235688899999999999999999999997652
Q ss_pred ----CH----HHHHHHhcCCCCCcccHHHHHHHH
Q 008547 514 ----SI----DPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 514 ----~~----~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
++ +.+|..+|.|+||.|+|+||+.+|
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 23 455699999999999999999876
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=115.56 Aligned_cols=120 Identities=15% Similarity=0.196 Sum_probs=98.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~ 108 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFR---LN---PQ 108 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCC---CC---HH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC---HH
Confidence 45666788899999999999999998854 3688999999999999999999999877643221 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
.+..+|..+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |..+|
T Consensus 109 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l 161 (167)
T 1gjy_A 109 TVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFS-YDDFI 161 (167)
T ss_dssp HHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEE-HHHHH
T ss_pred HHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEee-HHHHH
Confidence 677788888 889999999999999887778999999999999999975 44444
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4.1e-12 Score=116.33 Aligned_cols=120 Identities=26% Similarity=0.332 Sum_probs=99.1
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc------cc
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 477 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~------~~ 477 (562)
..+..+|..+|.|++|.|+..||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~ 141 (190)
T 1fpw_A 63 DFANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNED 141 (190)
T ss_dssp HHHHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCC
T ss_pred HHHHHHHHHHCCCCCCcEeHHHHHHHHHH-HccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccc
Confidence 34788899999999999999999999955 666778899999999999999999999999988765321111 00
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcC
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 524 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 524 (562)
.......+..+|+.+|.|++|.|+.+||..++.....+.++|..+|.
T Consensus 142 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~d~ 188 (190)
T 1fpw_A 142 EATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYDG 188 (190)
T ss_dssp CCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHhhccc
Confidence 01123578889999999999999999999999998889998888774
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=117.11 Aligned_cols=121 Identities=16% Similarity=0.197 Sum_probs=99.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 73 ~~~~~l~~~~D~d~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~ 139 (198)
T 1juo_A 73 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFR---LS---PQ 139 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HH
Confidence 35667788899999999999999998854 3688999999999999999999999877654221 11 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccH--HHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISL--SEFRRLL 539 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~--~eF~~~l 539 (562)
++..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+. .+|+.++
T Consensus 140 ~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 140 AVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 677788888 88999999999999988778899999999999999887 5665544
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.29 E-value=7.9e-12 Score=115.36 Aligned_cols=123 Identities=18% Similarity=0.251 Sum_probs=98.6
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc-
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH- 476 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~- 476 (562)
........+..+|..+|.|++|.|+..||..++.. ++...+...+..+|+.+|.|++|.|+++||..++.........
T Consensus 46 ~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~ 124 (198)
T 2r2i_A 46 LSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCN 124 (198)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSS
T ss_pred CCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-HccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCC
Confidence 34455567889999999999999999999999965 6667778899999999999999999999999888755322100
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHH
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 521 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 521 (562)
........+..+|+.+|.|++|.|+.+||..++....++.+++..
T Consensus 125 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 169 (198)
T 2r2i_A 125 EAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTR 169 (198)
T ss_dssp SCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHHS
T ss_pred chhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHhc
Confidence 011112457889999999999999999999999877777777764
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.3e-12 Score=102.30 Aligned_cols=59 Identities=32% Similarity=0.571 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
..+++++|+.||+|++|+|+.+||+.+|...| +++++|+.+|.|+||.|+|+||+++|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 45789999999999999999999999998776 599999999999999999999999874
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=5e-12 Score=105.39 Aligned_cols=107 Identities=17% Similarity=0.274 Sum_probs=76.6
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHh----hCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~----~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+..+..|..+|..||.| +|+|+..||+.+|.+ .++...+.+++..+++.+|.|+||.|+|+||+.++..+..
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~--- 86 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI--- 86 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---
Confidence 45678999999999988 899999999999854 2577888899999999999999999999999988765432
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCC
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKD 527 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~d 527 (562)
...+.|....+..+++...+ ..+.++|+++|.|||
T Consensus 87 --------~~he~f~~~~k~~~~~~~~d---------~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 87 --------ACNDYFVVHMKQENLYFQGD---------STVHEILSKLSLEGD 121 (121)
T ss_dssp --------HHHHHHTTSCC------------------CCHHHHHHHCCC---
T ss_pred --------HHHHHHHHHHHHhccCCCCc---------hHHHHHHHHhcccCC
Confidence 22335655555555554432 347778888887775
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.3e-12 Score=103.52 Aligned_cols=72 Identities=35% Similarity=0.570 Sum_probs=66.9
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHH
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
...++++++.+++++|..||.|++|+|+.+||+.+|.. +|..+++++++.+++.+|.|++|.|+|+||+.++
T Consensus 27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~-lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRS-LGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHH-HTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 45678899999999999999999999999999999955 8999999999999999999999999999999764
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-12 Score=113.15 Aligned_cols=120 Identities=19% Similarity=0.234 Sum_probs=95.4
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc------c
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------H 476 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~------~ 476 (562)
...+..+|..+|.|++|.|+.+||..++.. ++.....+++..+|+.+|.|++|.|+++||..++........ .
T Consensus 55 ~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~ 133 (183)
T 1s6c_A 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVL 133 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-HcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCc
Confidence 345677899999999999999999999954 555667789999999999999999999999988765421101 0
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhc
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 523 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 523 (562)
........+..+|+.+|.|++|.|+.+||..++.....+...|..+|
T Consensus 134 ~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~l~~~d 180 (183)
T 1s6c_A 134 KEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQ 180 (183)
T ss_dssp ----CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcChHHHHHHHHhh
Confidence 00011257888999999999999999999999988877777777765
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.8e-11 Score=113.21 Aligned_cols=191 Identities=14% Similarity=0.181 Sum_probs=125.0
Q ss_pred CccCccCCCCHHHHhcCccccccCCCCC---CCccHHHHHHHHhhh--hhhhhHHHH-HHhhccc--cchHHhhhhcccc
Q 008547 339 LVKDPRARLTAAQALSHPWVREGGDASE---IPIDISVLNNMRQFV--KYSRLKQFA-LRALAST--LDDEELADLRDQF 410 (562)
Q Consensus 339 l~~dP~~Rps~~~~l~hp~f~~~~~~~~---~~~~~~~l~~l~~~~--~~~~l~~~~-~~~~~~~--~~~~~~~~l~~~F 410 (562)
|..--++|.+.. .-|||-++..... -|....++..+..|. +++.++..+ +.++.+. ++--++..+.++|
T Consensus 12 l~~~we~~~~~~---~~~y~~~h~~~tt~w~~p~~~~~~~~l~~~~~~r~~~yRta~klr~lq~~~~l~lv~l~~~~~~f 88 (261)
T 1eg3_A 12 VQGPWERAISPN---KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDAL 88 (261)
T ss_dssp CCTTEEEEECTT---SCEEEEETTTTEEESSCHHHHHHHHHGGGGTTCSSHHHHHHHHHHHHHHHTTGGGCCHHHHHHHH
T ss_pred CCCCcceeECCC---CCeEeecCCcccccCCCCchhhhhcccccccceehhhHHHHHhhHhhhhhheeceeeHHHHHHHH
Confidence 333344555543 4588887765443 343344555555552 333333332 2223322 3344455566666
Q ss_pred ccccC-CCCCCCCHHHHHHHHHhh-------CCCc-----ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 411 DAIDV-DKNGSISLEEMRQALAKD-------LPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 411 ~~~D~-~~~G~i~~~el~~~l~~~-------~~~~-----~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
+.... .++..++..++..+|..+ .+.. ..+.-+..+|+.||.|++|.|+|.||+.++..+.....
T Consensus 89 ~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~l-- 166 (261)
T 1eg3_A 89 DQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL-- 166 (261)
T ss_dssp HHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCH--
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHHHcCCCH--
Confidence 65433 355678888888876442 1211 12344566999999999999999999988877654322
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc-------cC------------CHHHHHHHhcCCCCCcccHHHHHHH
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-------KG------------SIDPLLEEADIDKDGRISLSEFRRL 538 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-------~~------------~~~~~~~~~D~d~dG~i~~~eF~~~ 538 (562)
.++++-+|+.|| |+||+|+.+||..++.. .| .++.+|+.+| +||.|+.+||+..
T Consensus 167 ----eeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~ 239 (261)
T 1eg3_A 167 ----EDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDW 239 (261)
T ss_dssp ----HHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHH
T ss_pred ----HHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHH
Confidence 458899999999 99999999999988843 12 1788999986 8999999999998
Q ss_pred HHh
Q 008547 539 LRT 541 (562)
Q Consensus 539 l~~ 541 (562)
++.
T Consensus 240 ~~~ 242 (261)
T 1eg3_A 240 MRL 242 (261)
T ss_dssp HHT
T ss_pred HHh
Confidence 874
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.8e-11 Score=113.59 Aligned_cols=120 Identities=19% Similarity=0.256 Sum_probs=95.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc------c
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------D 477 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~------~ 477 (562)
..+..+|..+|.|++|.|+.+||..++.. +......+.+..+|+.+|.|++|.|+++||..++......... .
T Consensus 102 ~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~ 180 (229)
T 3dd4_A 102 TYAHFLFNAFDTDHNGAVSFEDFIKGLSI-LLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLK 180 (229)
T ss_dssp HHHHHHHHTTCSSCCSSCCHHHHHHHHHH-HHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHcCCCCCCeEeHHHHHHHHHH-HcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence 34667899999999999999999999955 4445567889999999999999999999999887754211000 0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcC
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 524 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 524 (562)
.......+..+|+.+|.|+||.|+.+||..++.....+..+|..+|.
T Consensus 181 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 181 EDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFEN 227 (229)
T ss_dssp ---CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHHHHHHHHhccc
Confidence 00012467889999999999999999999999988888889988874
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-11 Score=117.69 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=97.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc------cc
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 477 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~------~~ 477 (562)
..+..+|..+|.|++|.|+.+||..++.. ++.....+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~ 207 (256)
T 2jul_A 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSI-LLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILR 207 (256)
T ss_dssp HHHHHHHHHSSCSCCSEECSHHHHHHHHH-HHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSC
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHH-HhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccc
Confidence 45777899999999999999999999955 556677889999999999999999999999988775432110 00
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 523 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 523 (562)
.......+..+|+.+|.|+||.|+.+||..++.....+.+.|..+|
T Consensus 208 ~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~l~~~l~~~d 253 (256)
T 2jul_A 208 EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFE 253 (256)
T ss_dssp CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHHHHHHHHhhc
Confidence 0112357889999999999999999999999998888888888776
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.3e-11 Score=115.30 Aligned_cols=135 Identities=15% Similarity=0.103 Sum_probs=97.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC-cceEEEEEEcCCeEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~-iv~l~~~~~~~~~~~lv 175 (562)
.|.+....+.|..+.||++. ..+|..+++|..... ....+.+|+.+++.|..+.- +++++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 45555444566779999996 456778999986543 12356789999999975522 56689988888889999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC------------------------------------
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG------------------------------------ 219 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~------------------------------------ 219 (562)
|||++|.+|. . . ... ...++.+++..|..||+..
T Consensus 94 ~e~i~G~~l~--~--~---~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 94 LGEVPGQDLL--S--S---HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EECCSSEETT--T--S---CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEecCCcccC--c--C---cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 9999998873 2 1 112 2256667777777777643
Q ss_pred ----------------------ceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 220 ----------------------LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 220 ----------------------iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
++|+|++|.|||++ ++..+.|+|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence 99999999999997 344556999998753
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.20 E-value=7.1e-11 Score=109.70 Aligned_cols=118 Identities=19% Similarity=0.345 Sum_probs=85.9
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCcccH-HHHHHHHHhcCCC--CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHH
Q 008547 415 VDKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEK 491 (562)
Q Consensus 415 ~~~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~--~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~ 491 (562)
+|+.|.|+.+|+..+... .+....+ ..+..+|..+|.| ++|.|+++||..++.. . .... ...+.++|+.
T Consensus 11 ~~~~g~l~~~el~~l~~~-~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~-~~~~----~~~~~~~f~~ 82 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASV-TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--N-RNRR----NLFADRIFDV 82 (207)
T ss_dssp ----------CHHHHHHH-SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--C-TTCC----CHHHHHHHHH
T ss_pred hccccccCHHHHHHHHHh-CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--c-cccc----HHHHHHHHHH
Confidence 478899999999998854 4443322 3466788899999 9999999999987653 1 1111 1256679999
Q ss_pred hcCCCCCccCHHHHHHHhcccC-------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 492 FDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 492 ~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+|.|++|.|+.+||..++.... .+..+|+.+|.|++|.|+++||..++.
T Consensus 83 ~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 83 FDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp HCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred hcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999987654 278899999999999999999999986
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-11 Score=107.57 Aligned_cols=89 Identities=13% Similarity=0.273 Sum_probs=71.1
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
+++..++.++|..||.|++|.|+..||..+|.. +|..++..++..++..+|.|++|.|+|+||+.++... .
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 116 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK---R----- 116 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS---S-----
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 567889999999999999999999999999955 8999999999999999999999999999999877643 1
Q ss_pred HHHHHHHHHHHHhcCCCCCcc
Q 008547 480 KWHLRSQAAFEKFDIDRDGFI 500 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I 500 (562)
..+..+|+.||.|++|+-
T Consensus 117 ---~~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 117 ---SAVLKLVMMFEGKANESS 134 (150)
T ss_dssp ---CCHHHHHHC---------
T ss_pred ---HHHHHHHHHHcCCCCCCC
Confidence 246779999999999984
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.19 E-value=5.7e-11 Score=110.10 Aligned_cols=119 Identities=16% Similarity=0.147 Sum_probs=96.6
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc----c-
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE----H- 476 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~----~- 476 (562)
....+..+|..+|.|++|.|+.+||..++.. ++.....+++..+|+.+|.|++|.|+++||..++........ .
T Consensus 57 ~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~ 135 (204)
T 1jba_A 57 ATQYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEV 135 (204)
T ss_dssp THHHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCT
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-HccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccc
Confidence 3456777899999999999999999999965 566677889999999999999999999999988776532110 0
Q ss_pred ------ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHH
Q 008547 477 ------DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 521 (562)
Q Consensus 477 ------~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 521 (562)
........+..+|+.+|.|++|.|+.+||..++....++.++|..
T Consensus 136 ~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~ 186 (204)
T 1jba_A 136 EAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQM 186 (204)
T ss_dssp TSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHHS
T ss_pred cccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcChHHHHHHHh
Confidence 000123578889999999999999999999999988888888874
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.18 E-value=3.7e-11 Score=109.84 Aligned_cols=117 Identities=18% Similarity=0.238 Sum_probs=96.5
Q ss_pred CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC-CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC
Q 008547 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 495 (562)
Q Consensus 417 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 495 (562)
..+.++.+++..+... . ..+..++..+|+.+|.+ ++|.|+++||..++........ . ...+..+|+.+|.|
T Consensus 4 ~~~~l~~~~l~~l~~~-~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~--~---~~~~~~~f~~~D~d 75 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRK-T--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD--P---TKFATFVFNVFDEN 75 (190)
T ss_dssp CCCSCCHHHHHHHHHT-S--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSC--T---HHHHHHHHHHHCTT
T ss_pred ccccCCHHHHHHHHHc-c--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCC--h---HHHHHHHHHHHhcC
Confidence 3567899999988743 3 45788999999999988 8999999999988765422111 1 23588899999999
Q ss_pred CCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 496 RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 496 ~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
++|.|+.+||..++...+ ++..+|..+|.|++|.|+++||..++..
T Consensus 76 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 76 KDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp CSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 999999999999886553 4788999999999999999999999986
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.17 E-value=2.4e-11 Score=133.65 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=109.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.++..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 575 ~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~l---s---~~ 641 (714)
T 3bow_A 575 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL---P---CQ 641 (714)
T ss_dssp HHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEEC---C---HH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC---C---HH
Confidence 345667888999999999999999998652 7899999999999999999999998776542211 1 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHHHhccccCCC
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRN 548 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~~~~~ 548 (562)
.+..+|+.+| |+||.|+.+||..++.....+.++|+.+|.|++|.|+++|+..++.....-..+
T Consensus 642 ~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~~~~~~~ 705 (714)
T 3bow_A 642 LHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAA 705 (714)
T ss_dssp HHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEEEEEHHHHHHHHHHCCCC-
T ss_pred HHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEHHHHHHHHHHHHHHHHH
Confidence 7788999999 999999999999999877778899999999999999999998887765554444
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-11 Score=107.58 Aligned_cols=89 Identities=12% Similarity=0.261 Sum_probs=75.0
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
+++..++..+|..||.|++|.|+..||..+|.. +|..++..++..++..+|.|++|.|+|+||+..+... .
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 114 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK---R----- 114 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS---G-----
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 678899999999999999999999999999955 8999999999999999999999999999999876532 1
Q ss_pred HHHHHHHHHHHHhcCCCCCcc
Q 008547 480 KWHLRSQAAFEKFDIDRDGFI 500 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I 500 (562)
..+..+|+.||.|++|..
T Consensus 115 ---~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 115 ---SAILRMILMYEEKNKEHK 132 (147)
T ss_dssp ---GGGGGGGGGCCCC-----
T ss_pred ---HHHHHHHHHHccCCCCCC
Confidence 246668999999999985
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-11 Score=113.44 Aligned_cols=119 Identities=19% Similarity=0.251 Sum_probs=93.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc------cc
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 477 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~------~~ 477 (562)
..+..+|..+|.|++|.|+.+||..++.. ++.....+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 89 ~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~ 167 (224)
T 1s1e_A 89 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK 167 (224)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHHHhcCCCCCcEeHHHHHHHHHH-HccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCC
Confidence 45677899999999999999999999955 445567789999999999999999999999988765421100 00
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 523 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 523 (562)
.......+..+|+.+|.|+||.|+.+||..++.....+.+.|..++
T Consensus 168 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~l~~~l~~~~ 213 (224)
T 1s1e_A 168 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQ 213 (224)
T ss_dssp SSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhcCCC
Confidence 1112357888999999999999999999999987766666666543
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.8e-12 Score=109.57 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=50.6
Q ss_pred hhCCCcccHHHHHHHHHhcCCCCCcccchhhHHH-----HHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHH
Q 008547 432 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 506 (562)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~-----~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~ 506 (562)
+.+|..+++.++..++..+ +|.|+|+||+. ++..... .. .....++++|+.|| |+|+.+||+
T Consensus 3 r~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~--~~---~~~~~l~~aF~~fD----G~I~~~El~ 69 (123)
T 2kld_A 3 TAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKL--KK---NTVDDISESLRQGG----GKLNFDELR 69 (123)
T ss_dssp ---------------------------------------------------------CCSCSSTTTT----TCEEHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhc--Ch---hHHHHHHHHHHHhC----CCCCHHHHH
Confidence 3478899999999998876 78999999998 4432211 11 11235778999999 999999999
Q ss_pred HHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 507 MHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 507 ~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.++...| +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 70 ~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 70 QDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp HHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 9998887 488999999999999999999999986543
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.14 E-value=8.3e-11 Score=100.48 Aligned_cols=94 Identities=23% Similarity=0.386 Sum_probs=78.8
Q ss_pred HHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc---cC------
Q 008547 443 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL---KG------ 513 (562)
Q Consensus 443 ~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~---~~------ 513 (562)
+..+|..+|.+++|.|+++||...+........ ...+..+|+.+|.|++|.|+.+||..++.. ..
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 75 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN------EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSH------HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC------HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHH
Confidence 568999999999999999999987765432111 346888999999999999999999999852 21
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
++..+|+.+|.|++|.|+++||..++...
T Consensus 76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence 37889999999999999999999999754
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.6e-11 Score=94.63 Aligned_cols=75 Identities=27% Similarity=0.444 Sum_probs=65.1
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
|+..+++++..++..+|..+|.|++|+|+..||..++.. +| .++..++..++..+|.|++|.|+|+||+..+...
T Consensus 1 m~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp -----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CCccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 345678889999999999999999999999999999955 88 8899999999999999999999999999877643
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=104.00 Aligned_cols=100 Identities=20% Similarity=0.181 Sum_probs=82.0
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCccc-------HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-------~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
+..+|..+|.|++|.|+.+||..++......... ...+..+|+.+|.|++|.|+++||..++.... ..
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-----~~ 134 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-----MS 134 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-----CC
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-----CC
Confidence 3488999999999999999999998663333322 36689999999999999999999998776543 11
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
...+..+|+.+|.|++|.|+.+||..++....
T Consensus 135 ---~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 135 ---KAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp ---HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred ---HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 24678899999999999999999999887654
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.13 E-value=5.5e-11 Score=95.98 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhc-CCCC-CccCHHHHHHHhcc-c----C------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-K----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~----~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.|| +||+ |+|+.+||+.++.. . + +++++|+++|.|+||.|+|+||+.+|....
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~ 83 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 83 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 357889999998 8998 99999999999974 2 3 389999999999999999999999998754
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-11 Score=104.67 Aligned_cols=106 Identities=20% Similarity=0.175 Sum_probs=51.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh------
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------ 473 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~------ 473 (562)
..-...|..+|.|++|.|+.+||..++...+. .....+++..+|+.+|.|++|.|+++||..++......
T Consensus 27 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g 106 (143)
T 3a4u_B 27 AASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA 106 (143)
T ss_dssp ------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-----------
T ss_pred CCCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccC
Confidence 34456899999999999999999998855322 12345778999999999999999999998776544210
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHh
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 509 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 509 (562)
......+....+..+|+.+|.|+||.|+.+||..++
T Consensus 107 ~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 107 PLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp --CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 011122233445778899999999999999998765
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=7.7e-11 Score=97.13 Aligned_cols=63 Identities=19% Similarity=0.217 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcccc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 545 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~~ 545 (562)
.+++++|+.||+|++|+|+.+|++.++...+ ++.+++..+|.|+||.|+|+||+.+|......
T Consensus 22 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~~~ 88 (110)
T 1iq3_A 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVAR 88 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHH
Confidence 5788899999999999999999999998765 69999999999999999999999999875543
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.2e-11 Score=95.56 Aligned_cols=64 Identities=22% Similarity=0.316 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcccc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 545 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~~ 545 (562)
..+++++|+.||+|++|+|+.+|++.++...+ ++.+++..+|.|+||.|+|+||+.+|......
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~ 75 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVAR 75 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Confidence 45788899999999999999999999997665 48899999999999999999999999875543
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=8.1e-11 Score=94.52 Aligned_cols=63 Identities=24% Similarity=0.281 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
..+++++|+.||+|++|+|+.+|++.++...+ ++.+++..+|.|+||.|+|+||+.+|.....
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~ 75 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLISQ 75 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999998776 4889999999999999999999999977553
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.8e-11 Score=102.27 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=62.1
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 485 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~ 485 (562)
.+++|..+|.|++|.|+.+||..++...+.......++..+|+.+|.|++|.|+.+||..++..... .... ..++
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~---~~e~ 79 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI--EGMS---KEDA 79 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC--CCCC---HHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC--CCCC---HHHH
Confidence 4678999999999999999999988554444445678999999999999999999999987765431 0111 2468
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 486 QAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 486 ~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
..+|+.+|.|++|.|+.+||..++...
T Consensus 80 ~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 80 QGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 889999999999999999999988754
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=9e-11 Score=94.86 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.++++|+.||+|++|+|+.+|++.++...+ ++.++|..+|.|+||.|+|+||+.+|....
T Consensus 12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 75 (99)
T 1qjt_A 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 678899999999999999999999998776 489999999999999999999999997644
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.11 E-value=4e-11 Score=113.14 Aligned_cols=131 Identities=21% Similarity=0.172 Sum_probs=92.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh--hcccccHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ--LEEHDSEKWH 482 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~--~~~~~~~~~~ 482 (562)
.+.++|..+|.|++|.|+.+||..++..........+.+..+|+.+|.|++|.|+++||..++..... ..........
T Consensus 86 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~ 165 (226)
T 2zfd_A 86 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 165 (226)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 35668999999999999999999999653334556788999999999999999999999988753211 1111222233
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFR 536 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~ 536 (562)
..+..+|+.+|.|+||.|+.+||..++.....+...+.. ..-++..++|.+|+
T Consensus 166 ~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~ 218 (226)
T 2zfd_A 166 DIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL-QYLKDITTTFPSFV 218 (226)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGGGGGGCC-GGGGGHHHHC----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhch-HHhhchhhcchhHH
Confidence 456789999999999999999999998766543333322 12234455566555
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.11 E-value=3e-10 Score=115.08 Aligned_cols=142 Identities=25% Similarity=0.401 Sum_probs=104.4
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEec--ccccCchhhHHHHHHHHHHHHHccC-CCCcceEEEEEEcC---CeEEE
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDD---NYVYI 174 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~E~~~l~~l~~-hp~iv~l~~~~~~~---~~~~l 174 (562)
.+.|+.|.++.||++.. .+..+++|+.. .... ......+.+|+.+++.|.. +..+++++.++.+. +..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 45689999999999964 35678899765 3221 1123567889999999963 34578899888776 45899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL------------------------------------- 217 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~------------------------------------- 217 (562)
||||++|..+.+.. ...++......++.+++.+|..||+
T Consensus 119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99999998774321 2347788889999999999999997
Q ss_pred ---------------------cCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 218 ---------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 218 ---------------------~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
..++|+|++|.|||++..+ ...+.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3589999999999998421 13368999998864
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.09 E-value=7.9e-11 Score=103.42 Aligned_cols=89 Identities=18% Similarity=0.276 Sum_probs=72.9
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 513 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 513 (562)
.+++.+++.++..+|.+++ |.+|... .....+++.+|+.||+|++|+|+.+||+.++...+
T Consensus 20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~ 83 (150)
T 2jjz_A 20 ARQERRLAEINREFLCDQK----YSDEENL------------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK 83 (150)
T ss_dssp HHHHHHHHHHHHHHHTCGG----GSSCTTH------------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHHHHHhccCCC----chhhHhH------------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC
Confidence 3567889999999997764 4444321 11235788899999999999999999999998776
Q ss_pred ---CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 ---SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 ---~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+++.+|..+|.|+||.|+|+||+.+|..
T Consensus 84 ~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 84 THLEMKKMISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp CHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 3889999999999999999999999975
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=95.63 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhc-CCCCC-ccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.|| +|++| +|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~~ 95 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 95 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHH
Confidence 457899999999 89997 9999999999864 22 489999999999999999999999988744
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=93.08 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhc-CCCC-CccCHHHHHHHhcc-cC----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.|| +||+ |+|+.+||+.++.. .+ +++++|+++|.|+||.|+|+||+.+|....
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 83 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 83 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 357889999998 6885 89999999999874 32 489999999999999999999999998643
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-10 Score=94.94 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhc-CCCC-CccCHHHHHHHhcc-cC----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.|| +||+ |+|+.+||+.++.. .+ +++++|+++|.|+||.|+|+||+.+|....
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~ 86 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA 86 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 357889999998 7886 89999999999974 22 489999999999999999999999998643
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.3e-10 Score=103.86 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=79.1
Q ss_pred HHHHHHHHHhc-CCCCCcccchhhHHHHHhhhhhhc-ccccHHHHHHHH--------HHHHHhcCCCCCccCHHHHHHHh
Q 008547 440 ESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQLE-EHDSEKWHLRSQ--------AAFEKFDIDRDGFITPEELRMHT 509 (562)
Q Consensus 440 ~~~~~~l~~~~-d~~~~g~I~~~ef~~~~~~~~~~~-~~~~~~~~~~~~--------~~F~~~D~d~~G~I~~~El~~~l 509 (562)
..++..+|..+ |.|++|.|+++||..++....... ..........+. .+|+.+|.|++|.|+.+||..++
T Consensus 7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 86 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 35678899999 999999999999988776554110 011111112222 45999999999999999998877
Q ss_pred ccc---------------CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 510 GLK---------------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 510 ~~~---------------~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
... ..+..+|+.+|.|+||.|+++||..+++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g 135 (185)
T 2sas_A 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ 135 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC
T ss_pred HHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC
Confidence 533 1378899999999999999999999997654
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=103.02 Aligned_cols=94 Identities=21% Similarity=0.247 Sum_probs=80.6
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----C
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----S 514 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~ 514 (562)
..++..+|..+|.|++|.|+++||..++..... . ...+..+|..+|.|++|.|+.+||..++.... .
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~------~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~ 109 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGI--K------KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF 109 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--C------HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--C------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHH
Confidence 356788999999999999999999987765421 1 14678899999999999999999999887553 4
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 515 IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 515 ~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+..+|+.+|.|++|.|+.+||..++++
T Consensus 110 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 136 (180)
T 3mse_B 110 LKAAFNKIDKDEDGYISKSDIVSLVHD 136 (180)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHTTT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHcC
Confidence 889999999999999999999999984
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.2e-10 Score=98.56 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=80.6
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~ 513 (562)
.++..+|..+|.|++|.|+++||..++........ ..++..+|..+|.|++|.|+.+||..++... .
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~------~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 79 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK------KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKE 79 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHH
Confidence 56788999999999999999999987765432211 2467789999999999999999998877532 2
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
++..+|+.+|.|++|.|+.+||..++...+
T Consensus 80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 109 (143)
T 2obh_A 80 EILKAFKLFDDDETGKISFKNLKRVAKELG 109 (143)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 478899999999999999999999998654
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.08 E-value=6.6e-10 Score=98.08 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=80.9
Q ss_pred HHHHHHHHhcC-CCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc---------
Q 008547 441 SRVLEILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--------- 510 (562)
Q Consensus 441 ~~~~~l~~~~d-~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--------- 510 (562)
.++..+|..+| .+++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 86 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQT------KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCS------HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCC------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence 35677999999 999999999999987765432211 24677899999999999999999998883
Q ss_pred --ccCCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 511 --LKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 511 --~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
....+..+|+.+|.|++|.|+.+||..++...+
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELD 121 (158)
T ss_dssp TTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence 233599999999999999999999999998654
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.6e-10 Score=103.24 Aligned_cols=104 Identities=23% Similarity=0.337 Sum_probs=82.8
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc-----ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
.....++..+|..+|.|++|.|+++||..++......... ........+..+|+.+|.|++|.|+.+||..++..
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3345788999999999999999999999877654111100 01112357888999999999999999999998854
Q ss_pred cC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 512 KG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 512 ~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
.. .+..+|..+|.|++|.|+++||..++.
T Consensus 116 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred hcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 42 488899999999999999999999987
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-11 Score=96.80 Aligned_cols=79 Identities=30% Similarity=0.396 Sum_probs=63.1
Q ss_pred CCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCC
Q 008547 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDK 526 (562)
Q Consensus 453 ~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~ 526 (562)
|++|.|+|+|++ +.. ...... ...++++|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+
T Consensus 1 ~~~G~i~~~e~~--~~~--~l~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~ 72 (87)
T 1s6j_A 1 HSSGHIDDDDKH--MAE--RLSEEE----IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp CCSSSSSSHHHH--SSS--SSCSSS----TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCCCccCccHHH--HHH--HCCHHH----HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence 578999999943 221 111111 13577899999999999999999999998877 3889999999999
Q ss_pred CCcccHHHHHHHH
Q 008547 527 DGRISLSEFRRLL 539 (562)
Q Consensus 527 dG~i~~~eF~~~l 539 (562)
+|.|+|+||+.++
T Consensus 73 ~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCcCcHHHHHHHH
Confidence 9999999998754
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=127.71 Aligned_cols=125 Identities=15% Similarity=0.223 Sum_probs=105.6
Q ss_pred hhhhcccccc--ccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC-------CCcccchhhHHHHHhhhhhh
Q 008547 403 LADLRDQFDA--IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-------TDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 403 ~~~l~~~F~~--~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-------~~g~I~~~ef~~~~~~~~~~ 473 (562)
...++++|.. +|.|++|.|+..|+..+|.. ...++..+++.+|.+ ++|.|+|+||..++..+..
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~- 221 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL- 221 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC-
Confidence 3567778887 89999999999999988732 467899999999987 7899999999988765432
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-C---------------HHHHHHHhcCC----CCCcccHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S---------------IDPLLEEADID----KDGRISLS 533 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-~---------------~~~~~~~~D~d----~dG~i~~~ 533 (562)
..+++++|+.||.+++|+|+.+||+.+|.... + +.++|+.++.+ ++|.|+++
T Consensus 222 --------R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsld 293 (885)
T 3ohm_B 222 --------RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSME 293 (885)
T ss_dssp --------CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHH
T ss_pred --------HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchh
Confidence 13688999999999999999999999997542 2 78899999999 79999999
Q ss_pred HHHHHHHhc
Q 008547 534 EFRRLLRTA 542 (562)
Q Consensus 534 eF~~~l~~~ 542 (562)
+|..+|...
T Consensus 294 gF~~yL~S~ 302 (885)
T 3ohm_B 294 GFSRYLGGE 302 (885)
T ss_dssp HHHHHHTST
T ss_pred hhhhhccCc
Confidence 999999853
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=98.37 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=81.2
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~ 513 (562)
.++..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++... .
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~------~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 79 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVE------PAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSED 79 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCC------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC------HHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHH
Confidence 56788999999999999999999987765432211 2467889999999999999999999988641 1
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|..+|.|++|.|+.+||..++...+
T Consensus 80 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 109 (142)
T 2bl0_C 80 ILRQAFRTFDPEGTGYIPKAALQDALLNLG 109 (142)
T ss_dssp HHHHHHHHTCCSSCSCEEHHHHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 388899999999999999999999998653
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-10 Score=113.70 Aligned_cols=181 Identities=17% Similarity=0.242 Sum_probs=123.4
Q ss_pred ceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCC--cceEEEEEEcCC---eEEEEE
Q 008547 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFEDDN---YVYIAM 176 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~--iv~l~~~~~~~~---~~~lv~ 176 (562)
+.++.|....||++. ..+++|+.... .....+.+|+.+|+.|..+.. ++.++......+ ..|+||
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 458999999999872 45889975432 345678999999998854433 345555444333 358899
Q ss_pred eccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 008547 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------------------------------------- 217 (562)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~--------------------------------------- 217 (562)
++++|.+|..... ..++......++.+++..|..||+
T Consensus 96 ~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 96 TKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp ECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9999988865432 246778888888888888888886
Q ss_pred -------------------cCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCcccccCCCcc---cCchhc--
Q 008547 218 -------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY---VAPEVL-- 273 (562)
Q Consensus 218 -------------------~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~gt~~y---~aPE~~-- 273 (562)
..++|+|++|.||+++.. ....+.|+||+.+....+.... .....+ ..|+..
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~ 247 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDF---ISLMEDDEEYGMEFVSK 247 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHH---HTTCCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHH---HHHHhhccccCHHHHHH
Confidence 136999999999999841 1346789999998754332111 111111 233322
Q ss_pred -ccCCC------------CCcchHHHHHHHHHHHhCCCCC
Q 008547 274 -KRKSG------------PESDVWSIGVITYILLCGRRPF 300 (562)
Q Consensus 274 -~~~~~------------~~~DiwslG~il~el~~g~~pf 300 (562)
...|. ...+.|++|.++|.+.+|..+|
T Consensus 248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11121 1258999999999999998886
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-10 Score=91.57 Aligned_cols=89 Identities=28% Similarity=0.460 Sum_probs=73.4
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
.++++..++.++|..+|.+++|.|+..||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.........
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~- 80 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG- 80 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCC-
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCC-
Confidence 45677889999999999999999999999999955 8999999999999999999999999999999887755432211
Q ss_pred cHHHHHHHHHHHH
Q 008547 478 SEKWHLRSQAAFE 490 (562)
Q Consensus 478 ~~~~~~~~~~~F~ 490 (562)
....+++.+|+
T Consensus 81 --~~~~~l~~aF~ 91 (92)
T 2kn2_A 81 --NGWSRLRRKFS 91 (92)
T ss_dssp --HHHHHHHHHHT
T ss_pred --chHHHHHHHhc
Confidence 11245667774
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.06 E-value=4.1e-10 Score=100.65 Aligned_cols=97 Identities=21% Similarity=0.250 Sum_probs=80.9
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~ 513 (562)
.++..+|..+|.|++|.|+++||..++........ ...+..+|..+|.|++|.|+.+||..++... .
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 101 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK------KEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCC------HHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHH
Confidence 45678899999999999999999987765432211 2477889999999999999999999988642 2
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|+.+|.|++|.|+.+||..++...+
T Consensus 102 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 131 (169)
T 3qrx_A 102 EILKAFRLFDDDNSGTITIKDLRRVAKELG 131 (169)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 478899999999999999999999998654
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.04 E-value=8.5e-10 Score=96.90 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=83.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
.+..+|..+|.+++|.|+..||..++............+..+|+.+|.|++|.|+.+||...+...... ..........
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~ 117 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQI 117 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHH
Confidence 566688889999999999999999996544444667889999999999999999999999887653221 1122222334
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
+..+|..+|.|++|.|+.+||..++...+
T Consensus 118 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 118 VDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 44555559999999999999999987664
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.03 E-value=5.6e-10 Score=97.04 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~ 513 (562)
..+..+|..+|.+++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++... .
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 84 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPS------EAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ 84 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCC------HHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCC------HHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHH
Confidence 45667899999999999999999987765432211 2467889999999999999999999888643 2
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|..+|.|++|.|+.+||..++...+
T Consensus 85 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 114 (147)
T 4ds7_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (147)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHcC
Confidence 478899999999999999999999998654
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=90.23 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=78.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..+++++ +.++|..+| ++|.|+.+||..++.. .....+++..+|+.+|.|++|.|+.+||..++........
T Consensus 5 ~~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~ 76 (109)
T 3fs7_A 5 DILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR 76 (109)
T ss_dssp GTSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC
T ss_pred CcCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc
Confidence 3455554 445566666 7999999999998832 3456788999999999999999999999876654411011
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
... ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~~---~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 77 VLT---SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 111 24678899999999999999999998875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.3e-10 Score=98.42 Aligned_cols=97 Identities=20% Similarity=0.336 Sum_probs=80.5
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc-------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~ 513 (562)
..+..+|..+|.+++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++... .
T Consensus 23 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 96 (161)
T 3fwb_A 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELP------KREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96 (161)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCC------HHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHH
Confidence 34667899999999999999999988765432111 2468889999999999999999999888642 2
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|+.+|.|++|.|+.+||..++...+
T Consensus 97 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~ 126 (161)
T 3fwb_A 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELG 126 (161)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHHhC
Confidence 478899999999999999999999998654
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=94.07 Aligned_cols=61 Identities=25% Similarity=0.468 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhccc-----C------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+.++.+|..||.| +|+|+.+||+.+|... + +++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 35788999999998 8999999999999752 2 489999999999999999999999998754
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.01 E-value=5.7e-10 Score=98.75 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=79.6
Q ss_pred HHHHHHHHhcCCCC-CcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------
Q 008547 441 SRVLEILQAIDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~-~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 513 (562)
.++..+|..+|.|+ +|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++....
T Consensus 18 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 91 (161)
T 1dtl_A 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT------PEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91 (161)
T ss_dssp HHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCC------HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccc
Confidence 45678899999999 999999999988765432111 24678899999999999999999998876432
Q ss_pred ----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 ----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|..+|.|++|.|+.+||..++...+
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g 125 (161)
T 1dtl_A 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125 (161)
T ss_dssp CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 378899999999999999999999987543
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.01 E-value=7.5e-10 Score=91.25 Aligned_cols=103 Identities=15% Similarity=0.233 Sum_probs=78.4
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 476 (562)
.+++++ +.++|..+|. +|.|+..||..++.. .....+++..+|+.+|.|++|.|+++||..++.........
T Consensus 5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 345544 4555666666 899999999998832 34467889999999999999999999999877654210111
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
.. ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 77 LN---DTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp CC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 11 24678899999999999999999998875
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.01 E-value=6.8e-10 Score=101.42 Aligned_cols=97 Identities=21% Similarity=0.252 Sum_probs=81.2
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 514 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 514 (562)
..+..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~------~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~ 83 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM------ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN 83 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCC------HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC------HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHH
Confidence 35778999999999999999999987765432111 24678899999999999999999999886443 5
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 515 IDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 515 ~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
+..+|..+|.|++|.|+.+||..++...+
T Consensus 84 l~~~F~~~D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 84 LVSAFSYFDKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp THHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 89999999999999999999999987654
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.01 E-value=2.9e-10 Score=90.22 Aligned_cols=75 Identities=25% Similarity=0.468 Sum_probs=68.5
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
++..+++++..++..+|..+|.|++|.|+..||..++.. +|..++..++..++..+|.+++|.|+|+||+..+..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 445678889999999999999999999999999999955 899999999999999999999999999999987654
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=4e-10 Score=93.17 Aligned_cols=62 Identities=21% Similarity=0.347 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+++++|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|....
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 45788999999999999999999999998433 488999999999999999999999987654
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.6e-10 Score=101.56 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=77.6
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCC--------CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+++||..++.... ..
T Consensus 67 ~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-----~~ 141 (191)
T 2ccm_A 67 DGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-----IP 141 (191)
T ss_dssp HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-----CC
T ss_pred HHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-----CC
Confidence 34558899999999999999998865321 233356789999999999999999999998775442 11
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
...+..+|+.+|.|+||.|+.+||..++.
T Consensus 142 ---~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 170 (191)
T 2ccm_A 142 ---KSDCDAAFDTLSDGGKTMVTREIFARLWT 170 (191)
T ss_dssp ---HHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 24678899999999999999999998765
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.1e-10 Score=102.48 Aligned_cols=95 Identities=15% Similarity=0.233 Sum_probs=79.1
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 514 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 514 (562)
.++..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~ 110 (204)
T 3e3r_A 37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLD------QAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV 110 (204)
T ss_dssp ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCC------HHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHH
T ss_pred HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCC------HHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHH
Confidence 46778999999999999999999987765432211 24678899999999999999999999987654 3
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 515 IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 515 ~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+..+|+.+|.|++|.|+++||..++..
T Consensus 111 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 137 (204)
T 3e3r_A 111 IAAAFAKLDRSGDGVVTVDDLRGVYSG 137 (204)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHCCC
T ss_pred HHHHHHHhCcCCCCeEeHHHHHHHHcc
Confidence 788999999999999999999999874
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-10 Score=98.08 Aligned_cols=101 Identities=20% Similarity=0.302 Sum_probs=83.7
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++..+|..+|.+++|.|+..||..++..........+++..+|+.+|.|++|.|+.+||..++....... . ..+
T Consensus 47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~---~---~~e 120 (148)
T 2lmt_A 47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKV---T---DEE 120 (148)
T ss_dssp HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCC---C---HHH
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccc---c---HHH
Confidence 4556778889999999999999998866666677788999999999999999999999988776543221 1 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
+..+|+.+|.|+||.|+.+||.+++..
T Consensus 121 ~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 121 IDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 788999999999999999999988753
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.1e-10 Score=90.88 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhc-CCCC-CccCHHHHHHHhcc-c-------CCHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-K-------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~-------~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.|| +||+ |+|+.+||+.++.. . .+++++|..+|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 457899999999 7997 79999999999853 2 259999999999999999999999998764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.2e-10 Score=89.87 Aligned_cols=62 Identities=23% Similarity=0.331 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcCCC---CCccCHHHHHHHhccc-----C------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDR---DGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~---~G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++++|+.||+|+ +|+|+.+||+.++... + +++++|+++|.|+||.|+|+||+.+|....
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 457899999999964 7999999999998642 1 389999999999999999999999998754
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.7e-10 Score=92.49 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=64.0
Q ss_pred ccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcc
Q 008547 457 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRI 530 (562)
Q Consensus 457 ~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i 530 (562)
.++++++...+...... ....++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|
T Consensus 5 ~~~~~~~~~~l~~~~~~-------~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i 77 (105)
T 1wlz_A 5 ATADRDILARLHKAVTS-------HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRL 77 (105)
T ss_dssp TTCCHHHHHHHHHHHHH-------THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCB
T ss_pred chhHHHHHHHHHHHHHc-------hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCC
Confidence 46777887665543221 134788899999999999999999999998776 48899999999999999
Q ss_pred cHHHHHHHHHhc
Q 008547 531 SLSEFRRLLRTA 542 (562)
Q Consensus 531 ~~~eF~~~l~~~ 542 (562)
+|+||+.+|...
T Consensus 78 ~~~eF~~~~~~~ 89 (105)
T 1wlz_A 78 KYPDFLSRFSSE 89 (105)
T ss_dssp CHHHHHHHHC--
T ss_pred cHHHHHHHHhcc
Confidence 999999999864
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.5e-10 Score=88.29 Aligned_cols=74 Identities=15% Similarity=0.181 Sum_probs=67.6
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHH---HHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~---~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+...++++++.++.++|..||.+++|.|+..||..+|.. +|..++..+ +..++..+|.+++|.|+| ||+..+..
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 456678899999999999999999999999999999954 899999999 999999999999999999 99987654
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=98.87 Aligned_cols=98 Identities=21% Similarity=0.223 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 513 (562)
...+..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++....
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT------EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCC------HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence 356788999999999999999999987765432211 24678899999999999999999998875432
Q ss_pred -CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 -SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 -~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|..+|.|++|.|+.+||..++...+
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g 114 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 114 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 378899999999999999999999998754
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.00 E-value=5.1e-10 Score=91.35 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+++++|+.||+ +||+|+.+|++.++...+ ++.+++..+|.|+||.|+|+||+.+|....
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 4578889999999 999999999999998777 488999999999999999999999887643
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=96.97 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc--------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------- 512 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------- 512 (562)
.++..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++...
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 93 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT------KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK 93 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC------HHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccc
Confidence 56778999999999999999999988765432111 2467789999999999999999999887532
Q ss_pred --CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 513 --GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 513 --~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|+.+|.|++|.|+.+||..++...+
T Consensus 94 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g 126 (162)
T 1top_A 94 SEEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 2478899999999999999999999998654
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.3e-10 Score=98.50 Aligned_cols=96 Identities=21% Similarity=0.158 Sum_probs=77.1
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCc-cc-----HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LK-----ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~-----~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~ 480 (562)
..+|..+|.|++|.|+.+||..++....... .. ...+..+|+.+|.|++|.|+++||..++.... ..
T Consensus 58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-----~~-- 130 (166)
T 3akb_A 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-----VP-- 130 (166)
T ss_dssp HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-----CC--
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-----CC--
Confidence 4778999999999999999999885532111 01 23488999999999999999999998776543 11
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 481 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 131 -~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 131 -EDLARQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp -HHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 24678899999999999999999998774
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=97.39 Aligned_cols=98 Identities=19% Similarity=0.218 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------C
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 514 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 514 (562)
..+..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 100 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLK------ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDH 100 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCC------HHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHH
Confidence 44677899999999999999999987765422111 23678899999999999999999998886542 4
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 515 IDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 515 ~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
+..+|..+|.|++|.|+.+||..++...+.
T Consensus 101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~ 130 (166)
T 2aao_A 101 LFAAFTYFDKDGSGYITPDELQQACEEFGV 130 (166)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHTCC---
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence 788999999999999999999999986543
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.3e-10 Score=86.22 Aligned_cols=61 Identities=26% Similarity=0.447 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 45788999999999999999999999998776 38899999999999999999999998764
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-10 Score=83.83 Aligned_cols=58 Identities=29% Similarity=0.508 Sum_probs=53.0
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 356799999999999999999999998776 4889999999999999999999999875
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=98.99 E-value=5.1e-10 Score=97.77 Aligned_cols=100 Identities=23% Similarity=0.357 Sum_probs=80.3
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++..+|..+|.+++|.|+..||..++...+.......++..+|+.+|.|++|.|+.+||..++...... .. ...
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~ 120 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK---LT---DDE 120 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC---CC---HHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HHH
Confidence 456678889999999999999998885533333456778899999999999999999999877654221 11 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 121 VDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 78899999999999999999988764
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.8e-10 Score=87.31 Aligned_cols=71 Identities=27% Similarity=0.606 Sum_probs=65.1
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+++++..++.++|..+|.+++|.|+..||..++.. +|..++..++..+|..+|.+++|.|+|+||+..+..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 35778899999999999999999999999999965 799999999999999999999999999999987654
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.2e-10 Score=89.14 Aligned_cols=59 Identities=34% Similarity=0.572 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.+++++|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 29 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 5788999999999999999999999998776 4899999999999999999999999863
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=89.82 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=75.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++.++|..+| ++|.|+..||..++.. .......+..+|+.+|.|++|.|+++||..++........... ..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 82 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGL---TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT---DAE 82 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC---HHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHc---ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC---HHH
Confidence 3445566666 8999999999998832 1345788999999999999999999999987765420011111 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 83 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 83 TKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 78899999999999999999998764
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=98.98 E-value=9.3e-10 Score=96.28 Aligned_cols=95 Identities=18% Similarity=0.318 Sum_probs=78.7
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc--------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------- 512 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------- 512 (562)
..+..+|..+|.|++|.|+++||..++........ ...+..+|..+|.|++|.|+.+||..++...
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~------~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 84 (153)
T 3ox6_A 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPT------EMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADM 84 (153)
T ss_dssp HHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCC------HHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccccc
Confidence 34667899999999999999999987765432211 2467789999999999999999999888532
Q ss_pred ---CCHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 513 ---GSIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 513 ---~~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+..+|..+|.|++|.|+.+||..++..
T Consensus 85 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 85 IGVKELRDAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 23788999999999999999999999986
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=99.93 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----C
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----S 514 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~ 514 (562)
..++..+|..+|.|++|.|+.+||..++........ ..+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 51 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-------~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~ 123 (191)
T 3k21_A 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-------YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKL 123 (191)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-------TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-------HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHH
Confidence 356788999999999999999999988765432211 2566789999999999999999999875442 4
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 515 IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 515 ~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+..+|+.+|.|++|.|+.+||..++..
T Consensus 124 l~~~F~~~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 124 IYCAFRVFDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp HHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 788999999999999999999999976
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.5e-10 Score=91.25 Aligned_cols=71 Identities=21% Similarity=0.350 Sum_probs=62.3
Q ss_pred hHHhhhhcccccccc-CCCC-CCCCHHHHHHHHHhh----CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+.+|.++|..|| .|++ |+|+.+||+.+|... +|..++.++++.+++.+|.|+||.|+|+||+.++...
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 456789999999997 8887 999999999999653 4677889999999999999999999999999877653
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.7e-10 Score=92.17 Aligned_cols=89 Identities=19% Similarity=0.322 Sum_probs=63.8
Q ss_pred hHHhhhhccccccccC-CCCC-CCCHHHHHHHHHhhCCCc-----ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 400 DEELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~-~~~G-~i~~~el~~~l~~~~~~~-----~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
++++.++.++|..||. |++| +|+.+||..+|...+|.. .+..++..+++.+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 4567889999999995 9999 999999999996457742 5789999999999999999999999998776432
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCcc
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFI 500 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I 500 (562)
......|...| +++|.-
T Consensus 87 ----------~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ----------WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ----------HHHHC-------------
T ss_pred ----------HHHHHHHhhCC-CCCccc
Confidence 13455788888 888863
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=98.96 E-value=6.8e-10 Score=113.59 Aligned_cols=126 Identities=20% Similarity=0.207 Sum_probs=96.2
Q ss_pred ccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHH
Q 008547 411 DAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 490 (562)
Q Consensus 411 ~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~ 490 (562)
..+|.+.+|.+...++...... .-......++..+|+.+|.|++|.|+.+||..++........ ...+..+|+
T Consensus 283 k~iD~de~g~i~~~e~~~~~~~-~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s------~eel~~Lf~ 355 (450)
T 3sg6_A 283 KGIDFKEDGNILGHKLEYNTRD-QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT------EAELQDMIN 355 (450)
T ss_dssp EEESCCTTSTTTTTCBCCC----CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC------HHHHHHHHH
T ss_pred ccCCccccccchhhhhhhhhcc-cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC------HHHHHHHHH
Confidence 4578889998887766432211 111112357788999999999999999999988765432211 246788999
Q ss_pred HhcCCCCCccCHHHHHHHhcccC-------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 491 KFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 491 ~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+|.|++|.|+.+||..++.... .+..+|+.+|.|++|.|+.+||..+|....
T Consensus 356 ~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG 415 (450)
T 3sg6_A 356 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415 (450)
T ss_dssp TTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred HhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence 99999999999999999886543 378899999999999999999999998754
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=98.96 E-value=9.1e-10 Score=88.24 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhc-CCC-CCccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFD-IDR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.|| +|+ +|+|+.+||+.++.. .+ +++.+|..+|.|+||.|+|+||+.+|...
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 357889999999 798 589999999999864 22 38999999999999999999999998763
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1e-09 Score=86.98 Aligned_cols=61 Identities=33% Similarity=0.502 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||..++...+ ++..+|..+|.|+||.|+|+||+.++...
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 46788999999999999999999999998776 48999999999999999999999999764
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=89.32 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=76.3
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++.++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++........... ..+
T Consensus 10 e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 81 (109)
T 1rwy_A 10 DIKKAIGAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS---AKE 81 (109)
T ss_dssp HHHHHHHTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC---HHH
T ss_pred HHHHHHHHcC--CCCcEeHHHHHHHHhc---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC---HHH
Confidence 3445566667 8999999999998832 2345788999999999999999999999987765521011111 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
+..+|+.+|.|++|.|+.+||..++..
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 82 TKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 788999999999999999999987753
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=89.33 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=75.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++.++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++........... ..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 81 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT---DAE 81 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC---HHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC---HHH
Confidence 4455566666 7999999999998832 2345788999999999999999999999877654421011111 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 82 TKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 78899999999999999999988764
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=88.04 Aligned_cols=61 Identities=16% Similarity=0.269 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhc-CCCCC-ccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.|| +||+| +|+.+||+.++.. ++ +++.+|..+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 357889999998 89998 9999999999864 33 38999999999999999999999998764
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.2e-10 Score=84.05 Aligned_cols=56 Identities=25% Similarity=0.504 Sum_probs=51.2
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 486 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 486 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+.+|+.+|.|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 4689999999999999999999998765 4888999999999999999999999864
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=98.95 E-value=7.2e-10 Score=94.45 Aligned_cols=61 Identities=20% Similarity=0.212 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
.+++++|+.|| |+||+|+.+|++.+|...+ ++.+++..+|.|+||.|+|+||+.+|.....
T Consensus 51 ~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~~ 115 (139)
T 2jq6_A 51 PTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKV 115 (139)
T ss_dssp HHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 57889999999 9999999999999998766 5899999999999999999999999876543
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=98.95 E-value=6.4e-10 Score=89.20 Aligned_cols=71 Identities=23% Similarity=0.230 Sum_probs=63.1
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
+++++..++.++|..||+|++|+|+.+|++.++.. +| .++.++..+++.+|.|++|.|+|+||+.++....
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 46778899999999999999999999999999955 55 5688999999999999999999999998776543
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.9e-10 Score=97.75 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHh-cCCCCCccCHHHHHHHhccc---------
Q 008547 443 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKF-DIDRDGFITPEELRMHTGLK--------- 512 (562)
Q Consensus 443 ~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~-D~d~~G~I~~~El~~~l~~~--------- 512 (562)
+..+|..+|.|++|.|+++||..++........ ...+..+|..+ |.|++|.|+.+||..++...
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~------~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 79 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPT------NQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTK 79 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCC------HHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccc
Confidence 456899999999999999999987765432211 24678899999 99999999999999887655
Q ss_pred ---CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 513 ---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 513 ---~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|+.+|.|++|.|+.+||..++...+
T Consensus 80 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 113 (148)
T 1m45_A 80 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113 (148)
T ss_dssp CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHST
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 2488899999999999999999999998754
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=101.84 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=83.4
Q ss_pred cccccccCCCCCC-CCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh---cccccHHHHH
Q 008547 408 DQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHL 483 (562)
Q Consensus 408 ~~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~---~~~~~~~~~~ 483 (562)
++|..+|.|++|. |+.+||..++..........+.+..+|+.+|.|++|.|+.+||..++...... ......+...
T Consensus 95 ~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~ 174 (214)
T 2l4h_A 95 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 174 (214)
T ss_dssp HHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred HHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 4678889999999 99999999996644444456789999999999999999999999887755330 0111122233
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 515 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~ 515 (562)
.+.++|+.+|.|+||.|+.+||..++.....+
T Consensus 175 ~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p~~ 206 (214)
T 2l4h_A 175 LIDNILEESDIDRDGTINLSEFQHVISRSPDF 206 (214)
T ss_dssp HHHHHHHHHCCSCCSSBCSHHHHHHHHTCHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHhChHH
Confidence 45679999999999999999999988765433
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.9e-10 Score=88.83 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=62.7
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+++++..+++++|..||.|++|+|+.+|+..++.. +| .+..++..++..+|.|++|.|+|+||+.++...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 46788999999999999999999999999999965 55 568899999999999999999999999877644
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=86.02 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcC-CCCC-ccCHHHHHHHh-cccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDI-DRDG-FITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~-d~~G-~I~~~El~~~l-~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+ |++| +|+.+||+.++ ...+ ++..+|..+|.|+||.|+|+||+.++...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3578899999999 9999 99999999999 5554 68999999999999999999999998764
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=99.60 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=81.3
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCC----------------CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLP----------------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----------------~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+..+|..+|.|++|.|+..||..++..... .......+..+|+.+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 667788999999999999999999965443 3455678999999999999999999999988775
Q ss_pred hhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 470 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
.... .....+....+..+|+.+|.|++|.|+.+||..++....
T Consensus 143 ~~g~-~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (202)
T 2bec_A 143 MVGV-QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185 (202)
T ss_dssp SCCS-CCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred hcCC-CCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence 4111 111121223344455559999999999999999887653
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=98.94 E-value=7.1e-10 Score=102.11 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=71.7
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 513 (562)
...+..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++....
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~------~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~ 129 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKI------PPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKE 129 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----------CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHH
Confidence 345678999999999999999999988765422111 24678899999999999999999988775443
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.+..+|+.+|.|++|.|+.+||..++...
T Consensus 130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 130 VCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 47889999999999999999999999864
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=9.2e-10 Score=87.56 Aligned_cols=60 Identities=27% Similarity=0.414 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...++.+|+.||+|++|+|+.+||..++...+ +++.+|..+|.|+||.|+|+||+.++..
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 46788999999999999999999999998776 5889999999999999999999999875
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=98.94 E-value=8.5e-10 Score=110.19 Aligned_cols=107 Identities=19% Similarity=0.297 Sum_probs=82.5
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
...++++ ++.++|..+|.|++|.|+.+||..++...+......+++..+|+.+|.|++|.|+.+||..++..+....
T Consensus 332 G~~~Tee---EI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~L 408 (440)
T 3u0k_A 332 GQNPTEA---ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 408 (440)
T ss_dssp TCCCCHH---HHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCC
T ss_pred CCCCCHH---HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCC
Confidence 3344554 4566788899999999999999999866445455567899999999999999999999998776543211
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
. ..++.++|+.+|.|+||.|+.+||.++|.
T Consensus 409 S------deEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 409 T------DEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp C------HHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred C------HHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 1 24678899999999999999999999875
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-09 Score=96.66 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=81.1
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------- 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------- 513 (562)
.++..+|..+|.|++|.|+++||..++..+..... ...+..+|..+|.|++|.|+..||..++....
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~------~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~ 84 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS------EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQ 84 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCC------HHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChh------HHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHH
Confidence 35678899999999999999999887765433222 24678899999999999999999998886543
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
++..+|+.+|.|++|.|+.+||..+|...+
T Consensus 85 ~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 114 (176)
T 2lhi_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (176)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 378899999999999999999999998654
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.4e-10 Score=84.63 Aligned_cols=59 Identities=44% Similarity=0.701 Sum_probs=54.2
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||..++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 4788899999999999999999999998876 4889999999999999999999999863
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-09 Score=91.15 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=78.7
Q ss_pred cHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----
Q 008547 439 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----- 513 (562)
Q Consensus 439 ~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----- 513 (562)
+.+++..+|..+|.|++|.|+++||..++........ ...+..+|+. |++|.|+.+||..++....
T Consensus 3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~ 73 (145)
T 2bl0_B 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPT------NAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTE 73 (145)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCC------HHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGG
T ss_pred CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCC------HHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcc
Confidence 4556899999999999999999999987765432211 2356667776 7899999999999987652
Q ss_pred ---CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 ---SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ---~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|+.+|.|++|.|+.+||..++...+
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g 106 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG 106 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcC
Confidence 488899999999999999999999998754
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-09 Score=87.83 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=75.7
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
++.++|..+| ++|.|+.+||..++ . + .......+..+|..+|.|++|.|+.+||..++........... ..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~-~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 82 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALV-G-L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAE 82 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHH-T-C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHH-c-c-CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC---HHH
Confidence 4445556666 89999999999988 3 2 2345788999999999999999999999877665421011111 246
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
+..+|+.+|.|++|.|+.+||..++..
T Consensus 83 ~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 83 TKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 888999999999999999999988753
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=98.93 E-value=4.7e-09 Score=92.33 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=83.5
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..+..++..+ ..+|.+++|.|+..||..++...... ......+..+|+.+|.|++|.|+.+||..++......
T Consensus 43 ~~~~~~~~~l----~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-- 116 (156)
T 1wdc_C 43 NPRNEDVFAV----GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER-- 116 (156)
T ss_dssp CCCHHHHHHT----TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC--
T ss_pred CCCHHHHHHH----HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC--
Confidence 4455554444 66799999999999999999765443 5567889999999999999999999999887654221
Q ss_pred cccHHHHHHHHHHHHH--hcCCCCCccCHHHHHHHhcc
Q 008547 476 HDSEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~--~D~d~~G~I~~~El~~~l~~ 511 (562)
.. ..++..+|+. +|.|++|.|+.+||..++..
T Consensus 117 -~~---~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 117 -LS---DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp -CC---HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 11 2467889999 99999999999999988754
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-09 Score=85.06 Aligned_cols=61 Identities=31% Similarity=0.483 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.++...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 46789999999999999999999999998766 48899999999999999999999999764
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.7e-09 Score=92.01 Aligned_cols=96 Identities=17% Similarity=0.104 Sum_probs=79.8
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHh---cCCCCCccCHHHHHHHhccc-----
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKF---DIDRDGFITPEELRMHTGLK----- 512 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~---D~d~~G~I~~~El~~~l~~~----- 512 (562)
.++..+|..+|.+++|.|+++||..++........ ...+..+|+.+ |.|+ |.|+.+||..++...
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~------~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT------NAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC------HHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 45678999999999999999999887765432211 24677899999 9999 999999999988764
Q ss_pred ----CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 513 ----GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 513 ----~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..+|.|++|.|+.+||..++...+
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 115 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 115 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhC
Confidence 2478899999999999999999999998754
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=85.12 Aligned_cols=60 Identities=20% Similarity=0.374 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCCCCC---ccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDIDRDG---FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G---~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..++++|+.|| +++| +|+.+||+.++.. .+ +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~ 82 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 57888999999 7776 9999999999987 55 389999999999999999999999987643
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.6e-09 Score=86.28 Aligned_cols=61 Identities=33% Similarity=0.612 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++...
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~ 74 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 45788999999999999999999999998777 48999999999999999999999999764
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-09 Score=90.29 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=62.1
Q ss_pred chHHhhhhcccccccc-CCCCC-CCCHHHHHHHHHhh----CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 399 DDEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
.++++.++.++|..|| .|++| +|+.+||..+|... +|..+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 3567889999999999 89997 99999999999543 556678899999999999999999999999987654
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.3e-09 Score=87.14 Aligned_cols=104 Identities=18% Similarity=0.228 Sum_probs=77.5
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++. ++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++........
T Consensus 4 ~~~t~~e~~---~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 75 (108)
T 1rro_A 4 DILSAEDIA---AALQECQ--DPDTFEPQKFFQTSGL---SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GTSCHHHHH---HHHHHTC--STTCCCHHHHHHHHSG---GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred ccCCHHHHH---HHHHHcc--CCCCcCHHHHHHHHhc---CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC
Confidence 344555444 4555566 8999999999998731 2345778999999999999999999999876654421011
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
... ..++..+|+.+|.|++|.|+.+||..++.
T Consensus 76 ~~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 76 ELT---ESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCC---HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 111 24678899999999999999999998775
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.9e-09 Score=85.83 Aligned_cols=61 Identities=23% Similarity=0.343 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhc-CCCCC-ccCHHHHHHHhcc---cC-----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL---KG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~---~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.|| +|++| +|+.+||+.++.. .+ +++.+|..+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 357889999999 99999 9999999998864 22 59999999999999999999999999764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=86.48 Aligned_cols=71 Identities=23% Similarity=0.342 Sum_probs=60.3
Q ss_pred hHHhhhhccccccccCCC---CCCCCHHHHHHHHHhhCCCcc----cHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAIDVDK---NGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~---~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+.+|.++|..||.++ +|+|+.+||+.+|...++..+ +..+++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 456788999999999964 799999999999976555433 37889999999999999999999999887654
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.4e-09 Score=88.27 Aligned_cols=71 Identities=20% Similarity=0.402 Sum_probs=60.7
Q ss_pred hHHhhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+.+|.++|..|| .|++ |+|+.+||+.+|...+| ...+..+++.+++.+|.|+||.|+|+||+.++...
T Consensus 9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 456789999999997 7775 89999999999964454 45678999999999999999999999999877643
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=98.91 E-value=6.7e-10 Score=89.01 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhc-CCCCC-ccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.|| +||+| +|+.+||+.++.. ++ +++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 357889999999 89998 9999999999864 22 48999999999999999999999998753
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=90.33 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=63.9
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
+++++..++.++|..||.|++|+|+.+||..++. +..++.+++..+++.+|.|++|.|+|+||+.++....
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 5678889999999999999999999999999994 5677889999999999999999999999998776543
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-09 Score=87.84 Aligned_cols=70 Identities=24% Similarity=0.343 Sum_probs=62.8
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
+++++..+++++|..||+ ++|+|+.+|++.+|.. +| ++++++..+++.+|.|++|.|+|+||+.++....
T Consensus 9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHT-TT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 567889999999999999 9999999999999965 55 6788999999999999999999999998776544
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.4e-09 Score=86.59 Aligned_cols=71 Identities=20% Similarity=0.397 Sum_probs=59.5
Q ss_pred hHHhhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+.++.++|..|| .|++ |+|+.+||+.++...+| ...++.+++.+++.+|.|+||.|+|+||+..+...
T Consensus 6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 456789999999998 6775 89999999999965454 34578999999999999999999999999877643
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-09 Score=99.21 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=78.0
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHH-------HHhcCCCCCccCHHHHHHHhc---
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF-------EKFDIDRDGFITPEELRMHTG--- 510 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F-------~~~D~d~~G~I~~~El~~~l~--- 510 (562)
.++..+|..+|.|++|.|+++||..++.......... ...+..+| +.+|.|++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~----~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~ 111 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNAT----DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFA 111 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCC----HHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCC----HHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 3577899999999999999999988776543311111 12455555 999999999999999998875
Q ss_pred ------ccC---C-----HHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 511 ------LKG---S-----IDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 511 ------~~~---~-----~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
... . +..+|+.+|.|++|.|+.+||..++...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 158 (208)
T 2hpk_A 112 EAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD 158 (208)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred hhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 221 1 67799999999999999999999998754
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-09 Score=95.91 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=80.1
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC--CCCccCHHHHHHHhccc------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID--RDGFITPEELRMHTGLK------ 512 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~------ 512 (562)
.++..+|..+|.|++|.|+++||..++........ ...+..+|..+|.| ++|.|+.+||..++...
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~------~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~ 83 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPT------NAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCC------HHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCC
Confidence 45778999999999999999999987765422211 24688899999999 99999999999888643
Q ss_pred ---CCHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 513 ---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 513 ---~~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|+.+|.|++|.|+.+||..++...+
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 117 (151)
T 1w7j_B 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLG 117 (151)
T ss_dssp ----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSS
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 2477899999999999999999999998754
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-09 Score=84.25 Aligned_cols=61 Identities=30% Similarity=0.507 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-C------HHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S------IDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-~------~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
...++ +|+.||.|++|+|+.+||+.++...+ . +..+|..+|.|+||.|+|+||+.++....
T Consensus 8 ~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 8 EEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp HHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred HHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 35788 99999999999999999999998777 2 88999999999999999999999998643
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=9.9e-10 Score=87.35 Aligned_cols=71 Identities=32% Similarity=0.547 Sum_probs=63.3
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
...+++++..++.++|..+|.|++|.|+.+||..++.. +| .+..++..+|..+|.|++|.|+|+||+..+.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 34567888999999999999999999999999999955 77 5788999999999999999999999987664
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=96.86 Aligned_cols=106 Identities=14% Similarity=0.135 Sum_probs=81.0
Q ss_pred ccccccCCCCCC-CCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc---ccccHHHHHH
Q 008547 409 QFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---EHDSEKWHLR 484 (562)
Q Consensus 409 ~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~---~~~~~~~~~~ 484 (562)
+|..+|.+++|. |+..||..++............+..+|+.+|.|++|.|+.+||..++....... ..........
T Consensus 65 l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~ 144 (183)
T 1dgu_A 65 ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQL 144 (183)
T ss_dssp HHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHH
Confidence 566679999999 999999999976555555567899999999999999999999998876543200 0111111122
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCC
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGS 514 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~ 514 (562)
+..+|+.+|.|++|.|+.+||..++.....
T Consensus 145 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 174 (183)
T 1dgu_A 145 IDNILEESDIDRDGTINLSEFQHVISRSPD 174 (183)
T ss_dssp HHHHHHHHCTTSSSEEEHHHHHHHHCSSCH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHhChH
Confidence 345999999999999999999999876543
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-09 Score=80.66 Aligned_cols=63 Identities=21% Similarity=0.451 Sum_probs=58.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
++.++|..+|.+++|.|+.+||..++.. ++..++..++..+|..+|.|++|.|+|+||+..+.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALA-FSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHH-TCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 5778999999999999999999999955 89999999999999999999999999999997765
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=98.87 E-value=3.6e-09 Score=96.43 Aligned_cols=102 Identities=17% Similarity=0.204 Sum_probs=76.3
Q ss_pred HHHHHHHHhcCCCCCcccchhhHH-----HHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc---
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--- 512 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~-----~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--- 512 (562)
.++..+|..+|.|++|.|+++||. .++...... ..........+..+|+.+|.|++|.|+.+||..++...
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~-~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 94 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGAT-PEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATD 94 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCC-chhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcc
Confidence 457789999999999999999998 343322111 11100011157889999999999999999998876432
Q ss_pred ---------CC-HH----HHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 513 ---------GS-ID----PLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 513 ---------~~-~~----~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+ +. .+|+.+|.|++|.|+.+||..++...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 139 (191)
T 1uhk_A 95 ELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAG 139 (191)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 12 33 899999999999999999999998654
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.5e-09 Score=96.18 Aligned_cols=102 Identities=16% Similarity=0.245 Sum_probs=71.7
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHH-----HhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAA-----TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~-----~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 513 (562)
.++..+|..+|.|++|.|+++||... +..... ...........+..+|+.+|.|++|.|+.+||..++....
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~-~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 98 (195)
T 1qv0_A 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEA-TPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATS 98 (195)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTC-CHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCC-CccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhh
Confidence 34567999999999999999999843 222211 1111100112578899999999999999999988764321
Q ss_pred ----------C-HH----HHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 ----------S-ID----PLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 ----------~-~~----~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
+ +. .+|+.+|.|++|.|+.+||..+++..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g 143 (195)
T 1qv0_A 99 ELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISG 143 (195)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHS
T ss_pred hhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 2 33 899999999999999999999998654
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=88.50 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=74.2
Q ss_pred CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCC
Q 008547 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 496 (562)
Q Consensus 417 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 496 (562)
++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++....... . ..++..+|+.+|.|+
T Consensus 52 ~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~---~---~~~~~~~~~~~D~d~ 125 (143)
T 3j04_B 52 APGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRF---T---DEEVDEMYREAPIDK 125 (143)
T ss_dssp SSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCC---C---HHHHHHHHHHTTCCS
T ss_pred CCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCC---C---HHHHHHHHHHcCCCC
Confidence 8999999999999976556666778999999999999999999999998876542211 1 246788999999999
Q ss_pred CCccCHHHHHHHhcc
Q 008547 497 DGFITPEELRMHTGL 511 (562)
Q Consensus 497 ~G~I~~~El~~~l~~ 511 (562)
+|.|+.+||..++..
T Consensus 126 dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 126 KGNFNYVEFTRILKH 140 (143)
T ss_dssp SSCCCSTHHHHHHHS
T ss_pred CCcCcHHHHHHHHhc
Confidence 999999999998864
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-09 Score=118.87 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=95.0
Q ss_pred ccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc-------CCCCCcccchhhHHHHHhhhhhhcccccHHHHHHH
Q 008547 413 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-------DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 485 (562)
Q Consensus 413 ~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-------d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~ 485 (562)
||.|+||.|+..|+..++.. .+ ....++..+++.. |.+++|.|+|+||..++..+.. + .++
T Consensus 164 fd~n~dG~Is~kEl~~~l~~-~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~-R--------~EI 231 (816)
T 3qr0_A 164 TVEMEKNKIPVKAIQKCLSK-DK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE-R--------SEI 231 (816)
T ss_dssp HTSCCSSEEEHHHHHHHHCS-CH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC-C--------THH
T ss_pred ccCCCCCCCCHHHHHHHHHh-cC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC-H--------HHH
Confidence 78999999999999998832 22 1235688888887 5678899999999988776531 1 268
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHhcccC----------------CHHHHHHHhcC--C----CCCcccHHHHHHHHHhc
Q 008547 486 QAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADI--D----KDGRISLSEFRRLLRTA 542 (562)
Q Consensus 486 ~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~--d----~dG~i~~~eF~~~l~~~ 542 (562)
+++|+.||.|++|+|+. ||+.+|...+ ++.++++.++. | ++|.|++++|..+|...
T Consensus 232 ~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 232 EGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp HHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred HHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 88999999999999999 9999997543 26788888876 5 78999999999999864
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2.3e-09 Score=84.11 Aligned_cols=60 Identities=15% Similarity=0.037 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------C---HHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S---IDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~---~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||+.++...+ + +..+|..+|.|++|.|+| ||+.++...
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 45788999999999999999999999998776 5 788999999999999999 999998764
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.2e-09 Score=82.51 Aligned_cols=59 Identities=29% Similarity=0.463 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC-----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
+++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++...
T Consensus 4 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 577899999999999999999999886554 48899999999999999999999998764
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.86 E-value=2e-09 Score=86.17 Aligned_cols=67 Identities=33% Similarity=0.537 Sum_probs=60.8
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
+...+++++|..||.|++|.|+.+||..++.. +|..++.+++..+++.+|.|++|.|+|+||+..+.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34567889999999999999999999999955 89899999999999999999999999999997654
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-09 Score=81.69 Aligned_cols=66 Identities=32% Similarity=0.549 Sum_probs=60.1
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
...++.++|..+|.+++|.|+..||..++. .+|..++..++..++..+|.+++|.|+|+||+..+.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMA-GLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGG-GTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 356788999999999999999999999994 489999999999999999999999999999987654
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=98.85 E-value=3e-09 Score=84.68 Aligned_cols=71 Identities=23% Similarity=0.435 Sum_probs=61.6
Q ss_pred hHHhhhhccccccccCCCCC---CCCHHHHHHHHHhh----CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 400 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G---~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
+..+..+.++|..|| +++| +|+..||+.+|... +|...+..++..+++.+|.|+||.|+|+||+.++..+.
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~ 82 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 456788999999999 7777 99999999999542 77888999999999999999999999999998776543
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=9.6e-10 Score=84.53 Aligned_cols=65 Identities=31% Similarity=0.540 Sum_probs=58.8
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.++..+|..+|.|++|+|+.+||..++.. +| .++..++..++..+|.|++|.|+|+||+..+...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRT-LG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHH-HH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 46788999999999999999999999965 77 8899999999999999999999999999876543
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.2e-09 Score=111.71 Aligned_cols=104 Identities=19% Similarity=0.308 Sum_probs=82.9
Q ss_pred ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc--ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--
Q 008547 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 513 (562)
Q Consensus 438 ~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 513 (562)
....++..+|..+|.|++|.|+++||..++......... ........+..+|+.+|.|+||.|+.+||..++....
T Consensus 352 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~ 431 (504)
T 3q5i_A 352 EERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQIL 431 (504)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcc
Confidence 344678899999999999999999998877655332110 0011135788899999999999999999999886542
Q ss_pred ----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 ----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 ----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
++..+|+.+|.|+||.|+.+||..++..
T Consensus 432 ~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~ 463 (504)
T 3q5i_A 432 FSEERLRRAFNLFDTDKSGKITKEELANLFGL 463 (504)
T ss_dssp TCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC
T ss_pred cCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 4788999999999999999999999874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 562 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-84 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-82 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-80 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-80 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-80 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 7e-80 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-76 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-75 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-75 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-75 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-74 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-74 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-73 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-70 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-69 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-68 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-68 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 9e-68 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-66 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-62 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-62 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-62 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-62 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-60 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-60 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-59 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-59 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-58 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 7e-58 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 8e-58 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-57 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-56 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-56 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-56 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-55 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-55 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-54 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 5e-54 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 6e-54 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-53 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-53 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-53 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-53 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 8e-53 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 8e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-53 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-52 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-52 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-51 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-50 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-50 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-50 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-49 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-48 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-46 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-44 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-44 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-43 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 6e-43 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-43 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-41 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-40 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 7e-21 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-06 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-20 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-19 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 6e-19 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-18 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 6e-04 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 1e-17 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-17 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 2e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 4e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 0.001 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 0.004 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 7e-16 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 1e-08 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 9e-16 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 1e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 4e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 4e-04 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 7e-15 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 9e-09 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 8e-15 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-14 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 7e-14 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 7e-14 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 4e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-08 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 4e-13 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-08 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-12 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-06 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-12 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 2e-10 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 4e-12 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 8e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 6e-10 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 3e-11 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-08 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-11 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-07 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 4e-11 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 5e-09 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 6e-11 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 3e-06 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-10 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-06 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-10 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 4e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 6e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 0.001 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-10 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 4e-10 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-08 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-10 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-09 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-04 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 5e-10 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 3e-08 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 0.002 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-07 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 3e-07 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-09 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-05 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-09 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-08 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 0.004 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 2e-09 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 3e-09 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 4e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 6e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 1e-07 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 7e-09 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 1e-08 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 9e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-04 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-08 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 4e-08 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-08 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-07 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 6e-08 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-07 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-05 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 3e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 3e-07 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 2e-05 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 8e-07 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-06 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.002 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-06 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 4e-06 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 0.001 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 4e-06 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 0.003 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 1e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 3e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-04 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-05 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-05 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 1e-04 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 1e-04 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1sraa_ | 151 | a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPAR | 3e-04 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-04 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 0.004 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 263 bits (672), Expect = 2e-84
Identities = 115/298 (38%), Positives = 165/298 (55%), Gaps = 7/298 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y +LG G F +A DK VA+K I K + ++ E+ +L
Sbjct: 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLH 62
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ H N+V + +E ++Y+ M+L GGEL DRI + YTE+DA+ ++ Q+L
Sbjct: 63 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDA 119
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPE
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 179
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
VL +K D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+S
Sbjct: 180 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
AKDF++ L+ KDP R T QAL HPW+ G A + I SV +++ S+ KQ
Sbjct: 240 AKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 258 bits (660), Expect = 5e-82
Identities = 99/287 (34%), Positives = 148/287 (51%), Gaps = 7/287 (2%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG + +KA G K I P+ VK E+ I+ L H
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-H 85
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
++ ++AFED + + +E GGEL DRI +D + +E + +RQ H
Sbjct: 86 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMH 144
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
H +VH D+KPEN + K+ SS+K DFGL+ + P + + +A + APE++ R+
Sbjct: 145 EHSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 203
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
G +D+W+IGV+ Y+LL G PF + + + V R +F + S+S AKDF+
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 263
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382
K LL K+PR RLT AL HPW++ I S N +RQ +K
Sbjct: 264 KNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIK 310
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 251 bits (642), Expect = 2e-80
Identities = 85/280 (30%), Positives = 141/280 (50%), Gaps = 18/280 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM------ILPIAVEDVKREV 147
F Y ++LG G K AVK I+ + E +EV
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
IL+ ++GH N+++ + +E + + ++ +L + GEL D + + +EK+ ++R
Sbjct: 61 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRA 118
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L V H +VHRD+KPEN L +D ++K TDFG S + PG+K +++ G+ Y
Sbjct: 119 LLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 175
Query: 268 VAPEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+APE++ G E D+WS GVI Y LL G PFW + + + + ++ F
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 235
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 236 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 253 bits (647), Expect = 3e-80
Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 10/276 (3%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG + T++A G+ A K + E V++E++ + L H
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLR-H 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+V ++AFEDDN + + E GGEL +++ A + ++ +E +A +RQ+ + H
Sbjct: 83 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMH 141
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ VH D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV + K
Sbjct: 142 ENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 200
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
G +D+WS+GV++YILL G PF + +D + V + + IS KDF+
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 260
Query: 336 KKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 368
+KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 261 RKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 296
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 252 bits (644), Expect = 6e-80
Identities = 87/333 (26%), Positives = 155/333 (46%), Gaps = 18/333 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D ++LG G G +K ++ A+K ++ +REV++
Sbjct: 7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA--------RREVELH 58
Query: 151 QALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ ++V+ + +E+ + I ME +GGEL RI + D +TE++A+ +++
Sbjct: 59 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 118
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ H + HRD+KPEN L+ S + ++ LK TDFG + + Y
Sbjct: 119 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 178
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRR 321
YVAPEVL + D+WS+GVI YILLCG PF+ G+ + + +F
Sbjct: 179 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 238
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFV 381
W +S K ++ LL +P R+T + ++HPW+ + + P+ S + +
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE- 297
Query: 382 KYSRLKQFALRALASTLDDEELADLRDQFDAID 414
++ +K+ ALA+ D E ++ DA +
Sbjct: 298 RWEDVKEEMTSALATMRVDYEQIKIKKIEDASN 330
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 251 bits (643), Expect = 7e-80
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 12/307 (3%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ +Y I + LG G+FG + + ++ K ++ VK+E+ IL
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILN 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H N++ + +FE + + E G ++ +RI E++ V Q+
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEA 114
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H H + H D++PEN ++ + S++K +FG + +KPG F+ + + Y APE
Sbjct: 115 LQFLHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V + +D+WS+G + Y+LL G PF +T I + ++ + F + + IS
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE 233
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA 390
A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+ ++ Y L +
Sbjct: 234 AMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKD 289
Query: 391 LRALAST 397
L + S
Sbjct: 290 LNMVVSA 296
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 241 bits (616), Expect = 1e-76
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I L H
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 123
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
++HRD+KPEN L S LK DFG S P + + G+ Y+ PE+++ +
Sbjct: 124 SKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGR 179
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
+ D+WS+GV+ Y L G+ PF T +K + R + F ++ A+D +
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGARDLI 235
Query: 336 KKLLVKDPRARLTAAQALSHPWVRE 360
+LL +P R + L HPW+
Sbjct: 236 SRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 240 bits (612), Expect = 1e-75
Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 8/274 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D + K+ TE++A ++Q+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 122
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN + +K DFGL+ I G +F++I G+ +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 238 bits (608), Expect = 4e-75
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 13/278 (4%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + E + E+ +++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRE 73
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ N+V + +++ + +++ ME GG L D + ++ E A V R+ L+
Sbjct: 74 N-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPE 271
H + ++HRD+K +N L D S+K TDFG I K +VG+ Y++APE
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + +S
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAI 245
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
+DF+ + L D R +A + L H +++ S +
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 238 bits (608), Expect = 6e-75
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ L H N +++ + ++ ++ ME C G + KK E + A V L
Sbjct: 69 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGAL 125
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y++A
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANSF---VGTPYWMA 179
Query: 270 PEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PEV+ + + + DVWS+G+ L + P ++ + +N+
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PALQSG 237
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQF--VK 382
S ++FV L K P+ R T+ L H +V + I I + +R+ ++
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQ 297
Query: 383 YSRLKQF 389
Y ++K+
Sbjct: 298 YRKMKKI 304
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 235 bits (600), Expect = 5e-74
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D + + + I LG G FG Y A +K A K I+ +ED E+ IL
Sbjct: 7 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL 63
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ H N+VK +AF +N ++I +E C GG +D ++ + + TE VV +Q L
Sbjct: 64 ASCD-HPNIVKLLDAFYYENNLWILIEFCAGG-AVDAVMLELERPLTESQIQVVCKQTLD 121
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 269
H + ++HRD+K N LF D +K DFG+S + ++ +G+ Y++A
Sbjct: 122 ALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMA 178
Query: 270 PEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ R ++DVWS+G+ + P + + ++ +++P +P
Sbjct: 179 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP 238
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363
S++ KDF+KK L K+ AR T +Q L HP+V +
Sbjct: 239 -SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 234 bits (597), Expect = 7e-74
Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 14/273 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 60
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 117
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAP 270
H G+ HRD+KPEN L +LK +DFGL+ + + + G+ YVAP
Sbjct: 118 YLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 271 EVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
E+LKR+ DVWS G++ +L G P+ ++ + K + PW I
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKID 233
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
++ + K+LV++P AR+T W +
Sbjct: 234 SAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 232 bits (594), Expect = 4e-73
Identities = 86/268 (32%), Positives = 130/268 (48%), Gaps = 14/268 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVL 273
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 126 GKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
KS SD+W++G I Y L+ G PF E IF+++++ + DF A+
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKAR 238
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVRE 360
D V+KLLV D RL + + ++
Sbjct: 239 DLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (577), Expect = 4e-70
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 12/267 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + F+ ++ ME GG+L+ I + ++ A +++ H
Sbjct: 63 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
G+V+RD+K +N L +D +K DFG+ + + K G+ Y+APE+L
Sbjct: 121 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG 177
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+ D WS GV+ Y +L G+ PF + E+ +F + + P + + AKD
Sbjct: 178 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PRWLEKEAKDL 233
Query: 335 VKKLLVKDPRARLTAAQA-LSHPWVRE 360
+ KL V++P RL HP RE
Sbjct: 234 LVKLFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 221 bits (565), Expect = 5e-69
Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 9/269 (3%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 66
Query: 157 ENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y+ E + YI ME +G L D + + T K A V+ +
Sbjct: 67 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQAL 124
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG-LSDFIKPGKKFQDIVGSAYYVAPE 271
H +G++HRD+KP N + + + ++D + ++G+A Y++PE
Sbjct: 125 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 184
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
+ S SDV+S+G + Y +L G PF + + + +R P +S
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD 244
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVR 359
V K L K+P R A + VR
Sbjct: 245 LDAVVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 220 bits (562), Expect = 1e-68
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +G G +G K++G + K+++ M + + EV +L+ L H
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELK-HP 63
Query: 158 NVVKFYNAFED--DNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAA 213
N+V++Y+ D + +YI ME CEGG+L I K+ E+ V+ Q+
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 214 ECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYY 267
ECH H ++HRD+KP N ++K DFGL+ + F + VG+ YY
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
++PE + R S +SD+WS+G + Y L PF ++ + ++ K R+
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF---RRIPYR 237
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S+ + + ++L R + + L +P +
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 219 bits (559), Expect = 4e-68
Identities = 55/271 (20%), Positives = 107/271 (39%), Gaps = 16/271 (5%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R +G G F Y D VA +++ K+ + K E ++L+ L
Sbjct: 9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQ- 66
Query: 156 HENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H N+V+FY+++E + + EL G L + K+ K RQ+L+
Sbjct: 67 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKG 124
Query: 212 AAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H ++HRD+K +N S+K D GL+ K + ++G+ ++A
Sbjct: 125 LQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMA 181
Query: 270 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSIS 328
PE+ + K DV++ G+ + P+ + I++ V
Sbjct: 182 PEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAI 239
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
K+ ++ + ++ R + L+H + +
Sbjct: 240 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 218 bits (556), Expect = 9e-68
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 20/273 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
+ +Y +G LLG G FG Y ++ VA+K +EK+++ + + V EV +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 151 QAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
+ + +G V++ + FE + + +E E + L + + E+ A Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVL 120
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
CH G++HRD+K EN L LK DFG +K + D G+ Y
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSP 177
Query: 270 PEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
PE + R G + VWS+G++ Y ++CG PF E++R + FR +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QRV 227
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S+ + ++ L P R T + +HPW+++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 216 bits (550), Expect = 3e-66
Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 51/306 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ LG G G + + K +G +A K I P + RE+++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECN-S 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+V FY AF D + I ME +GG L + KK R E+ V +++
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 217 -LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H ++HRD+KP N L S +K DFG+S + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQG 177
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPDF------------ 319
+SD+WS+G+ + GR P +F +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 320 -------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ P S +DFV K L+K+P R Q +
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 355 HPWVRE 360
H +++
Sbjct: 298 HAFIKR 303
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 206 bits (524), Expect = 4e-62
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ KLLG G FG + +KA G A+K + K +I V E ++LQ H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ AF+ + + ME GGEL + ++ +TE+ A +++ H
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK 276
+V+RD+K EN + +D +K TDFGL G + G+ Y+APEVL+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F ++S AK +
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLL 236
Query: 336 KKLLVKDPRARL-----TAAQALSHPWVRE 360
LL KDP+ RL A + + H +
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 205 bits (522), Expect = 4e-62
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 18/269 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G FG ++ + NG A+K ++K ++ VE E +L + H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++ + F+D +++ M+ EGGEL L +K R+ A ++ H
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFS--LLRKSQRFPNPVAKFYAAEVCLALEYLHS 122
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
+++RD+KPEN L ++ +K TDFG + ++ + G+ Y+APEV+ +
Sbjct: 123 KDIIYRDLKPENILL---DKNGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKP 177
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
D WS G++ Y +L G PF+D ++++L + F P + KD +
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLS 233
Query: 337 KLLVKDPRARL-----TAAQALSHPWVRE 360
+L+ +D RL +HPW +E
Sbjct: 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 206 bits (525), Expect = 4e-62
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 16/273 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-- 154
+++ +++G G FG Y G A+K ++K ++ + E +L ++
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+V AF + + ++L GG+L + + ++E D +++
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 122
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
H +V+RD+KP N L E ++ +D GL+ K VG+ Y+APEVL+
Sbjct: 123 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ 178
Query: 275 RKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +D +S+G + + LL G PF E+ R + S S +
Sbjct: 179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELR 237
Query: 333 DFVKKLLVKDPRARLT-----AAQALSHPWVRE 360
++ LL +D RL A + P+ R
Sbjct: 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (517), Expect = 5e-62
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 19/268 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ T+G+ +G G FG Y VAVK + P ++ K EV +L+ H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR-H 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N++ F + + I + CEG L L ++++ + RQ + H
Sbjct: 64 VNILLFM-GYSTAPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVL 273
++HRD+K N ED ++K DFGL+ +F+ + GS ++APEV+
Sbjct: 122 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 274 KRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFRRKPWPSI 327
+ + +SDV++ G++ Y L+ G+ P+ + ++ K +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSH 355
+ K + + L K R Q L+
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (512), Expect = 2e-60
Identities = 82/315 (26%), Positives = 123/315 (39%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 62
Query: 153 LAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + VY+ L G +L + K + + Q
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQHLSNDHICYFLYQ 117
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVG 263
+LR H ++HRD+KP N L LK DFGL+ P + V
Sbjct: 118 ILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVADPDHDHTGFLTEYVA 174
Query: 264 SAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------- 314
+ +Y APE++ D+WS+G I +L R F K +L
Sbjct: 175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 234
Query: 315 ----------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 295 HPYLEQYYDPSDEPI 309
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (511), Expect = 4e-60
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 44/306 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQ 65
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLD-RILAKKDSRYTEKDA 201
I++ L H N+V+ F +D+ Y+ + ++ R ++
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+ + Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 262 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----- 314
+ S YY APE++ + DVWS G + LL G+ F + E+++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 315 ---------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
P + PW P A +LL P ARLT +A +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 355 HPWVRE 360
H + E
Sbjct: 303 HSFFDE 308
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 198 bits (505), Expect = 1e-59
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 51/302 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + + LG G++ + A + N ++V VK ++ K + +KRE+KIL+ L G
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK------KKIKREIKILENLRGG 89
Query: 157 ENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
N++ + +D + E + T+ D + ++L+
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDY 144
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
CH G++HRD+KP N + E L+ D+GL++F PG+++ V S Y+ PE+L
Sbjct: 145 CHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 275 RKS--GPESDVWSIGVITYILLCGRRPFWDKT------------------EDGIFKEVLR 314
D+WS+G + ++ + PF+ D I K +
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262
Query: 315 NKPDF----------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
P F + +S A DF+ KLL D ++RLTA +A+ HP+
Sbjct: 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
Query: 359 RE 360
Sbjct: 323 YT 324
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 5e-59
Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENV 159
LG GQF Y A DK VA+KKI+ RE+K+LQ L H N+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
+ +AF + + + + E I+ T + L+ H H
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RK 276
++HRD+KP N L E+ LK DFGL+ F P + + V + +Y APE+L R
Sbjct: 121 ILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM 177
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP----------- 325
G D+W++G I LL ++ + + WP
Sbjct: 178 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237
Query: 326 -------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ + D ++ L + +P AR+TA QAL +
Sbjct: 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (494), Expect = 4e-58
Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 19/278 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMIL-PIAVEDVKREVKILQA 152
+ + K+LG G +G ++ + G A+K ++K ++ E + E ++L+
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ +V + AF+ + +++ ++ GGEL + + R+TE + + V +++
Sbjct: 85 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGEIVLAL 142
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP--GKKFQDIVGSAYYVAP 270
H G+++RD+K EN L + + TDFGLS ++ D G+ Y+AP
Sbjct: 143 EHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199
Query: 271 EVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
++++ D WS+GV+ Y LL G PF E E+ R +
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 259
Query: 328 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 360
S AKD +++LL+KDP+ RL A + H + ++
Sbjct: 260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 193 bits (490), Expect = 7e-58
Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 36/292 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G +G Y A + G+ A+KKI K RE+ IL+ L H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKELK-H 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK Y+ + + E + L ++L + A + Q+L A CH
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVL-- 273
++HRD+KP+N L + LK DFGL+ P +K+ + + +Y AP+VL
Sbjct: 118 DRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI------ 327
+K D+WS+G I ++ G F +E + R K WP++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 328 -------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S D + K+L DP R+TA QAL H + +E
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 8e-58
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 37/299 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQA 152
D++Y +G G +G + A D NG R VA+K++ REV +L+
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRH 63
Query: 153 LAG--HENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
L H NVV+ ++ + + + + E + + + + ++
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT-TYLDKVPEPGVPTETIKDMM 122
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 265
Q+LR H H +VHRD+KP+N L S +K DFGL+ +V +
Sbjct: 123 FQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTL 179
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+Y APEVL + S D+WS+G I + + F ++ ++L + W
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239
Query: 325 P-----------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P I KD + K L +P R++A ALSHP+ ++
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (487), Expect = 4e-57
Identities = 75/314 (23%), Positives = 116/314 (36%), Gaps = 50/314 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y +G G FG + A + G +VA+KK+ RE+KILQ L H
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-H 68
Query: 157 ENVVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
ENVV +Y+ + CE ++T + V++ +
Sbjct: 69 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQML 126
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVG 263
L H + ++HRDMK N L D LK DFGL+ K + + V
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
+ +Y PE+L +R GP D+W G I + TE + +
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243
Query: 322 KPWPSISN----------------------------SAKDFVKKLLVKDPRARLTAAQAL 353
+ WP++ N A D + KLLV DP R+ + AL
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303
Query: 354 SHPWVREGGDASEI 367
+H + S++
Sbjct: 304 NHDFFWSDPMPSDL 317
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 189 bits (480), Expect = 3e-56
Identities = 56/296 (18%), Positives = 106/296 (35%), Gaps = 24/296 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K + E KI + + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + MEL + +++ K ++ QM+ H
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--------DIVGSAYYV 268
+HRD+KP+NFL K+ + + DFGL+ + + Q ++ G+A Y
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP---- 323
+ D+ S+G + G P+ ++ R P
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGGDASEIPIDISVLNN 376
+ ++ + + Q + + R+G + D ++L
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS-YDYVFDWNMLKF 295
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (477), Expect = 3e-56
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 19/263 (7%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + + +G G+FG + + G++VAVK I+ + + E ++ L
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT-----AQAFLAEASVMTQLR- 58
Query: 156 HENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V+ E+ +YI E G L+D + ++ S +
Sbjct: 59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 274
+ VHRD+ N L ED+ K +DFGL+ + + APE L+
Sbjct: 119 LEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEALR 173
Query: 275 RKS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
K +SDVWS G++ + + GR P+ + V + ++ +
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAVY 230
Query: 333 DFVKKLLVKDPRARLTAAQALSH 355
+ +K D R + Q
Sbjct: 231 EVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 4e-56
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 38/308 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ Y + +G G +G A D G +VA+KK+ + + + RE+++L+
Sbjct: 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKH 73
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLR 210
+ HENV+ + F D + + + L K K + E +V QML+
Sbjct: 74 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H G++HRD+KP N ED LK DFGL+ + V + +Y AP
Sbjct: 133 GLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ--ADSEMTGYVVTRWYRAP 187
Query: 271 EVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------------- 314
EV+ + D+WS+G I ++ G+ F KE+++
Sbjct: 188 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 247
Query: 315 ---------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
P+ +K + SI S A + ++K+LV D R+TA +AL+HP+
Sbjct: 248 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307
Query: 362 GDASEIPI 369
D + P
Sbjct: 308 HDTEDEPQ 315
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 3e-55
Identities = 69/304 (22%), Positives = 114/304 (37%), Gaps = 41/304 (13%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDR-----VAVKKIEKNKMILP 137
++ YD +F R GK+LG G FG AT VAVK +++
Sbjct: 24 REYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--S 81
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---- 193
E + E+K++ L HEN+V A +Y+ E C G+LL+ + +K++
Sbjct: 82 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 141
Query: 194 -----------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236
+ T +D Q+ + VHRD+ N L
Sbjct: 142 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---T 198
Query: 237 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY- 291
+K DFGL+ I + + ++APE L +SDVWS G++ +
Sbjct: 199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 258
Query: 292 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
I G P+ D F ++++N F+ + ++ D R R +
Sbjct: 259 IFSLGVNPYPGIPVDANFYKLIQN--GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 316
Query: 352 ALSH 355
S
Sbjct: 317 LTSF 320
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (472), Expect = 3e-55
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 34/292 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + +G G +G Y A +K G+ VA+KKI + RE+ +L+ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NH 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK + +N +Y+ E L + A + + Q+L+ A CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVL-- 273
H ++HRD+KP+N L + ++K DFGL+ P + + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS------- 326
+ D+WS+G I ++ R F +E + R WP
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 327 ------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ + + ++L DP R++A AL+HP+ ++
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 183 bits (465), Expect = 3e-54
Identities = 66/278 (23%), Positives = 106/278 (38%), Gaps = 21/278 (7%)
Query: 88 FGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
D + R + LG G FG ++ T RVA+K ++ M + E +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM----SPEAFLQ 61
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E ++++ L HE +V+ Y ++ YI E G LLD + + +
Sbjct: 62 EAQVMKKL-RHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 119
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVG 263
Q+ A VHRD++ N L E+ K DFGL+ I+ + Q
Sbjct: 120 AQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKF 176
Query: 264 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 321
+ APE +SDVWS G++ L GR P+ + +V R +R
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRM 233
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPW 357
P S D + + K+P R T + +
Sbjct: 234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 5e-54
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 17/262 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
T K LG GQFG + VA+K I++ M + ++ E K++ L+ HE
Sbjct: 6 LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HE 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR 275
+HRD+ N L + +K +DFGLS ++ + + PEVL
Sbjct: 119 KQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 276 KS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+SD+W+ GV+ + I G+ P+ T + + + +R S
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKVYT 232
Query: 334 FVKKLLVKDPRARLTAAQALSH 355
+ + R T LS+
Sbjct: 233 IMYSCWHEKADERPTFKILLSN 254
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 183 bits (464), Expect = 6e-54
Identities = 60/279 (21%), Positives = 105/279 (37%), Gaps = 23/279 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D++ ++G G FG A K +G R+ + D E+++L
Sbjct: 8 DWND-IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--------------LAKKDSRYTE 198
L H N++ A E Y+Y+A+E G LLD + S +
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
+ + R +HRD+ N L E+ K DFGLS + K
Sbjct: 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKK 183
Query: 259 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNK 316
++A E L SDVWS GV+ + ++ G P+ T +++++ +
Sbjct: 184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 242
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+R + + + D +++ + P R + AQ L
Sbjct: 243 --YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (460), Expect = 2e-53
Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 22/279 (7%)
Query: 89 GYDKDFDR-RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVK 144
+ K+ D I +++G G+FG K G R VA+K ++ D
Sbjct: 18 EFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFL 75
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E I+ H NV+ V I E E G L D L + D ++T +
Sbjct: 76 SEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGM 133
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD---- 260
+R + VHRD+ N L + K +DFGLS F++
Sbjct: 134 LRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190
Query: 261 --IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNK 316
+ APE ++ RK SDVWS G++ + ++ G RP+WD T + + +
Sbjct: 191 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-- 248
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
D+R P ++ + KD R Q ++
Sbjct: 249 -DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 3e-53
Identities = 56/270 (20%), Positives = 94/270 (34%), Gaps = 17/270 (6%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQ 151
++ + + LG G FG A + VAVK ++ + + P A++D REV +
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+L H N+++ Y + EL G LLDR+ K + + Q+
Sbjct: 67 SL-DHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEG 123
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----DIVGSAYY 267
+HRD+ N L +K DFGL + +
Sbjct: 124 MGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
APE LK ++ SD W GV + + G+ P+ I ++ + R
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PE 238
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+ + + P R T
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 4e-53
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 36/293 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G +G + A ++ + VA+K++ + RE+ +L+ L H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELK-H 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+N+V+ ++ D + + E C+ + + Q+L+ CH
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCH 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL-- 273
++HRD+KP+N L + LK +FGL+ F P + + V + +Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPS------ 326
+ D+WS G I L RP + D K + R + WPS
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 327 -------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
++ + +D ++ LL +P R++A +AL HP+ +
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 180 bits (457), Expect = 4e-53
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 15/270 (5%)
Query: 90 YDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+ +E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 64
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+++ + H N+V+ + YI E G LLD + + + Q
Sbjct: 65 AVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSA 265
+ +HRD+ N L E+ +K DFGLS +
Sbjct: 124 ISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+ APE L +SDVW+ GV+ + + + + E+L + D+R +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL--EKDYRMERP 238
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ ++ +P R + A+
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (460), Expect = 8e-53
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 18/270 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NF 100
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
L++RD+KPEN L + ++ TDFG + +K + + G+ +APE++ K
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSK 213
Query: 277 S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
D W++GV+ Y + G PF+ I+++++ K F S+ KD +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLL 269
Query: 336 KKLLVKDPRARL-----TAAQALSHPWVRE 360
+ LL D R +H W
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (460), Expect = 8e-53
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 55/319 (17%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY K +G G G A D VA+KK+ + + RE+ +++ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCV-N 74
Query: 156 HENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
H+N++ N F E+ VY+ MEL + + + + ++ QML
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LCQVIQMELDHERMSYLLYQML 129
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H G++HRD+KP N + KS D +LK DFGL+ V + YY A
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 270 PE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------------- 314
PE +L D+WS+G I ++ + F + + +V+
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 315 --------NKPDFRRKPWPSI----------------SNSAKDFVKKLLVKDPRARLTAA 350
N+P + +P + ++ A+D + K+LV DP R++
Sbjct: 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306
Query: 351 QALSHPWVREGGDASEIPI 369
AL HP++ D +E+
Sbjct: 307 DALQHPYINVWYDPAEVEA 325
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 9e-53
Identities = 56/273 (20%), Positives = 107/273 (39%), Gaps = 20/273 (7%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
++ +++ + + LG GQFG ++ +VAVK +++ M + +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLA 57
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E +++ L H+ +V+ Y + +YI E E G L+D + + T +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF--QDIVG 263
Q+ A +HRD++ N L K DFGL+ I+ + +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKF 172
Query: 264 SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 321
+ APE + +SDVWS G++ ++ GR P+ T + + + R +R
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRM 229
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ ++ + P R T S
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (451), Expect = 1e-52
Identities = 53/263 (20%), Positives = 105/263 (39%), Gaps = 17/263 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
T + +G GQFG ++ N D+VA+K I + M + ED E +++ L H
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SH 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+V+ Y + + + E E G L D + + + + + + A
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK 274
++HRD+ N L E+ +K +DFG++ F+ + + +PEV
Sbjct: 119 EACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 275 -RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS GV+ + + + + +++ + +++ FR S
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVY 232
Query: 333 DFVKKLLVKDPRARLTAAQALSH 355
+ + P R ++ L
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 5e-52
Identities = 79/311 (25%), Positives = 125/311 (40%), Gaps = 44/311 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ RY +G G +G A D G RVAVKK+ + I + RE+++L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKH 73
Query: 153 LAGHENVVKFYNAFEDDNYV-----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+ HENV+ + F + + G +L + + K + T+ ++ Q
Sbjct: 74 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQ 129
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+LR H ++HRD+KP N ED LK DFGL+ + V + +Y
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVATRWY 184
Query: 268 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR----- 320
APE++ D+WS+G I LL GR F K +LR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 244
Query: 321 ----------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ + A D ++K+LV D R+TAAQAL+H +
Sbjct: 245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 359 REGGDASEIPI 369
+ D + P+
Sbjct: 305 AQYHDPDDEPV 315
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 8e-51
Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 22/267 (8%)
Query: 102 KLLGHGQFGYTYVAT--DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
K LG G FG K VAVK + KN+ P +++ E ++Q L + +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQL-DNPYI 70
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V+ E +++ + ME+ E G L + +++ +K+ +V Q+
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----IVGSAYYVAPEVLK- 274
VHRD+ N L + K +DFGLS ++ + + + APE +
Sbjct: 128 FVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 275 RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
K +SDVWS GV+ + G++P+ + + + + R D
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYD 241
Query: 334 FVKKLLVKDPRARLTAAQ---ALSHPW 357
+ D R A L + +
Sbjct: 242 LMNLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 1e-50
Identities = 71/297 (23%), Positives = 106/297 (35%), Gaps = 36/297 (12%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILP 137
T YD ++ R + GK LG G FG AT VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--L 67
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS--- 194
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 195 -------------RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241
+D Q+ + A +HRD+ N L
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRIT 184
Query: 242 KATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGR 297
K DFGL+ IK + + ++APE + ESDVWS G+ + L
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244
Query: 298 RP-FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+ D F ++++ FR D +K DP R T Q +
Sbjct: 245 SSPYPGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 3e-50
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 23/274 (8%)
Query: 97 RYTIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
I + LG G FG + + VA+K +++ E++ RE +I+ L
Sbjct: 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQL 66
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
+ +V+ + + + ME+ GG L ++ K++ + A ++ Q+
Sbjct: 67 -DNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMK 123
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----IVGSAYYVA 269
VHRD+ N L K +DFGLS + + + A
Sbjct: 124 YLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 180
Query: 270 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
PE + RK SDVWS GV + L G++P+ + + + K R + P
Sbjct: 181 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPEC 237
Query: 328 SNSAKDFVKKLLVKDPRARLTAA---QALSHPWV 358
+ + R Q + +
Sbjct: 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (434), Expect = 6e-50
Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 18/266 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R +G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQF 65
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H ++VK +N V+I MELC GEL L + + Q+ A
Sbjct: 66 -DHPHIVKLIGVIT-ENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALA 122
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPE 271
VHRD+ N L S + +K DFGLS +++ ++ ++APE
Sbjct: 123 YLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 272 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
+ R+ SDVW GV + IL+ G +PF + + + + R P+
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPP 236
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSH 355
+ + K DP R + +
Sbjct: 237 TLYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 169 bits (429), Expect = 6e-49
Identities = 50/273 (18%), Positives = 105/273 (38%), Gaps = 22/273 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G+ +G G FG + T+ N +VA+K + ++ E + + LAG
Sbjct: 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGC 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y ++ + + ++L G L+ +L +++ K A+ +QML H
Sbjct: 61 TGIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 118
Query: 217 LHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIKPG--------KKFQDIVGSAY 266
LV+RD+KP+NFL ++K + + DFG+ F + ++ +++ G+A
Sbjct: 119 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 178
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG----IFKEVLRNKPDFRR 321
Y++ + D+ ++G + L G P+ + + + R
Sbjct: 179 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 238
Query: 322 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ ++ A
Sbjct: 239 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (427), Expect = 1e-48
Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 31/292 (10%)
Query: 90 YDKDFD---RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIA 139
D ++ R +GK LG G FG +A +VAVK ++ +
Sbjct: 4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKD 61
Query: 140 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
+ D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 121
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + + KD Q+ R +HRD+ N L
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL 181
Query: 246 FGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 303
I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 182 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
Query: 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+ +FK + R + +N ++ P R T Q +
Sbjct: 242 PVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 4e-46
Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 16/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAG 155
+ K+LG G FG Y G++V + K + P A +++ E ++ ++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-D 69
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
+ +V + I +L G LLD + KD + Q+ +
Sbjct: 70 NPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 127
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEV 272
LVHRD+ N L K +K TDFGL+ + +K + ++A E
Sbjct: 128 EDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 273 LKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
+ + +SDVWS GV + L+ G +P+ I + + + R P +
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTID 241
Query: 331 AKDFVKKLLVKDPRARLTAAQALSH 355
+ K + D +R + +
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIE 266
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 2e-44
Identities = 52/267 (19%), Positives = 98/267 (36%), Gaps = 18/267 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQA 152
T K++G G+FG Y K + + VA+K ++ D E I+
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQ 65
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
H N+++ + I E E G L + +KD ++ ++R +
Sbjct: 66 F-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGM 123
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYV 268
VHRD+ N L + K +DFGLS ++ + +
Sbjct: 124 KYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180
Query: 269 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
APE + RK SDVWS G++ + ++ + + + + + + FR
Sbjct: 181 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND--GFRLPTPMDC 238
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALS 354
++ + + ++ R A +S
Sbjct: 239 PSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 157 bits (398), Expect = 2e-44
Identities = 50/295 (16%), Positives = 96/295 (32%), Gaps = 42/295 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKRE 146
++ R + +G G FG + A VAVK +++ D +RE
Sbjct: 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQRE 66
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY---------- 196
++ + N+VK + + E G+L + + +
Sbjct: 67 AALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125
Query: 197 ------------TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 244
+ + + RQ+ A VHRD+ N L E+ +K
Sbjct: 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIA 182
Query: 245 DFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR-P 299
DFGLS I ++ + ++ PE + + ESDVW+ GV+ + + P
Sbjct: 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242
Query: 300 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
++ + + V + + ++ K P R +
Sbjct: 243 YYGMAHEEVIYYVRDGN---ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 2e-43
Identities = 53/272 (19%), Positives = 99/272 (36%), Gaps = 21/272 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQ 151
+++G G FG Y T N + AVK + + V E I++
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMK 83
Query: 152 ALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ H NV+ + + + + G+L + + + T KD Q+ +
Sbjct: 84 DFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAK 141
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-----IVGSA 265
VHRD+ N + E ++K DFGL+ + +
Sbjct: 142 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198
Query: 266 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFRRKP 323
++A E L+ +K +SDVWS GV+ + L+ P + D I +L+ + R
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR---RLLQ 255
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+ + + K R + ++ +S
Sbjct: 256 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 155 bits (391), Expect = 6e-43
Identities = 69/335 (20%), Positives = 122/335 (36%), Gaps = 64/335 (19%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL- 153
D RY + + LG G F ++A D N VA+K + +K+ E + E+K+LQ +
Sbjct: 12 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVN 67
Query: 154 ---------AGHENVVKFYNAFED---DNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 201
G +++K + F + + + G LL I +
Sbjct: 68 DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 127
Query: 202 AVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQ 259
+ +Q+L H G++H D+KPEN L + +L + L + + +
Sbjct: 128 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT 187
Query: 260 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV------ 312
+ + + Y +PEVL G +D+WS + + L+ G F K+
Sbjct: 188 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 247
Query: 313 ---------------------------LRNKPDFRRKPWPSI-----------SNSAKDF 334
LRN + P + + DF
Sbjct: 248 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 307
Query: 335 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +L DPR R A ++HPW+++ EI +
Sbjct: 308 LSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 6e-43
Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 33/288 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ T+ + LG G FG Y K RVA+K + + + E +++
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMK 78
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--------YTEKDAAV 203
+VV+ + MEL G+L + + + + +
Sbjct: 79 EF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQD 260
+ ++ A + + VHRD+ N + ED ++K DFG++ I +K
Sbjct: 138 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGK 194
Query: 261 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPD 318
+ +++PE LK SDVWS GV+ + I +P+ + + + + V+
Sbjct: 195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-- 252
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 360
+ + + ++ +P+ R + + +S P RE
Sbjct: 253 -LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 7e-41
Identities = 60/301 (19%), Positives = 107/301 (35%), Gaps = 57/301 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALA 154
R + + +G G+FG + + G+ VAVK + RE +I Q +
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE------RSWFREAEIYQTVML 54
Query: 155 GHENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN +++ + E G L D + T + +
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTAS 111
Query: 211 VAAECHLH--------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 260
A H+ + HRD+K +N L K++ + D GL+ D
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIA 168
Query: 261 ---IVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPF---------- 300
VG+ Y+APEVL +S +D++++G++ + +
Sbjct: 169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228
Query: 301 -----WDKTEDGIFKEVLRNKPDFR---RKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 352
D + + + K V K R +++ + ARLTA +
Sbjct: 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288
Query: 353 L 353
Sbjct: 289 K 289
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 1e-40
Identities = 67/295 (22%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAV 140
YD F R R +GK LG G FG A A VAVK +++
Sbjct: 3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEH 60
Query: 141 EDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKD------ 193
+ E+KIL + H NVV A + + + +E C+ G L + +K++
Sbjct: 61 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 120
Query: 194 --------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
T + Q+ + +HRD+ N L E + +K D
Sbjct: 121 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICD 177
Query: 246 FGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRR-PF 300
FGL+ I + D ++APE + R +SDVWS GV+ + + P+
Sbjct: 178 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 237
Query: 301 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
D F L+ R + + + +P R T ++ + H
Sbjct: 238 PGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.2 bits (215), Expect = 7e-21
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
+S L +E++A+ ++ F D D NGSIS E+ + E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDG 59
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 513
+ ++FSEF+A + + + E AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLE-----AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 514 -----SIDPLLEEADIDKDGRISLSEFRRLLR 540
+D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (107), Expect = 2e-06
Identities = 23/129 (17%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 396
L KD +++++ L+ G SE ++ + +F
Sbjct: 17 ALFDKDNNGSISSSE-LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
++ +L + F D + +G IS E++ L + KL ++ V ++L+ + + G
Sbjct: 76 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDMLREVS-DGSG 133
Query: 457 LVDFSEFVA 465
++ +F A
Sbjct: 134 EINIQQFAA 142
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 85.0 bits (209), Expect = 5e-20
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
+ L +E +A+ + FD D D G IS +E+ + + + I++ +D +
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGS 70
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 514
G +DF EF+ + + + + L F FD + DGFI EEL G
Sbjct: 71 GTIDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEH 128
Query: 515 -----IDPLLEEADIDKDGRISLSEFRRLL 539
I+ L++++D + DGRI EF +++
Sbjct: 129 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 83.4 bits (205), Expect = 1e-19
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E++A+ ++ F D D +G+I+ +E+ + E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGT 61
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL------ 511
+DF EF++ + ++ + E AF+ FD D +G I+ ELR
Sbjct: 62 IDFPEFLSLMARKMKEQDSEEELIE-----AFKVFDRDGNGLISAAELRHVMTNLGEKLT 116
Query: 512 KGSIDPLLEEADIDKDGRISLSEFRRLLRT 541
+D ++ EADID DG I+ EF R++ +
Sbjct: 117 DDEVDEMIREADIDGDGHINYEEFVRMMVS 146
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 6e-19
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 28/177 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+LK + L ++E+ F +G + ++ + P+
Sbjct: 3 SKLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTK 60
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ D N DG ++FSEF+ A L + + AF+ +D+D DG+IT
Sbjct: 61 FATFVFNVFDENKDGRIEFSEFIQA------LSVTSRGTLDEKLRWAFKLYDLDNDGYIT 114
Query: 502 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
E+ + +D + D + DG+++L EF+ +
Sbjct: 115 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 81.4 bits (200), Expect = 1e-18
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+L+ ++ L + + E+ + F +G +S+EE ++ P+
Sbjct: 2 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 59
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 60 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 113
Query: 502 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
E+ + + + + + D ++DG++SL EF R +
Sbjct: 114 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 80.8 bits (198), Expect = 1e-18
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 392 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 450
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 60
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510
D + G VDF EF+ + + + + L F FD + DG+I EEL++
Sbjct: 61 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 118
Query: 511 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 540
G I+ L+++ D + DGRI EF ++
Sbjct: 119 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 80.8 bits (198), Expect = 3e-18
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP---------WKLKESRVLEILQ 448
+ + + F+ +DV+ NG ISL+EM + + K + V
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 449 AIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
D+ ++ AT + + +++ + A F+ D D++G IT +
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 504 ELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540
E + +T G + DID+ G++ + E R
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 38.8 bits (89), Expect = 6e-04
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 2/152 (1%)
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK-YSRLKQ 388
S + V K + + V + +++ + +L
Sbjct: 30 SLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT 89
Query: 389 FALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQ 448
L A FD +D D+NG+I+L+E + K E +
Sbjct: 90 DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGIIQSSEDCEETFR 148
Query: 449 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 480
D + G +D E L + EK
Sbjct: 149 VCDIDESGQLDVDEMTRQHLGFWYTMDPACEK 180
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.3 bits (189), Expect = 1e-17
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 459
+E+ ++R+ FD D D G+I ++E+ + + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 460 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513
F +F+ ++ E AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILK-----AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 514 SIDPLLEEADIDKDGRISLSEFRRLL 539
+ +++EAD D DG +S EF R++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIM 141
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 77.5 bits (190), Expect = 4e-17
Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 35/205 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM---------------ILPIAVED 142
IGKL+G G+ + + VK + +A+
Sbjct: 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60
Query: 143 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
+ E + LQ L V K Y + + MEL + + R ++
Sbjct: 61 ARNEFRALQKLQ-GLAVPKVYAWEGN----AVLMELIDAK---------ELYRVRVENPD 106
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
V+ +L A+ + G+VH D+ N L + + DF S + + +++I+
Sbjct: 107 EVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQSVEVGE-EGWREIL 161
Query: 263 GSAYYVAPEVLKRKSGPESDVWSIG 287
R E D+ S
Sbjct: 162 ERDVRNIITYFSRTYRTEKDINSAI 186
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.2 bits (184), Expect = 2e-16
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 384 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 441
S+L + L L + D E+ F + +G ++ E+ + + P+ E
Sbjct: 6 SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63
Query: 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ D + +G + F EF+ + + W AFE +D++ DG+IT
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSW------AFELYDLNHDGYIT 117
Query: 502 PEELR----MHTGLKGS--------------IDPLLEEADIDKDGRISLSEFRRLLRT 541
+E+ + GS + + + D ++DG I+L EFR +
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 74.3 bits (181), Expect = 4e-16
Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 15/155 (9%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK----------DLPWKLKESRVLEILQA 449
D + ++ F+ ID DK+G+I+ + + + +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 450 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 506
+D + F+ ++ F D + D I+ +E
Sbjct: 62 TAVAGGKGIDETTFI-NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 507 -MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
M K + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 38.1 bits (87), Expect = 0.001
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 17/75 (22%)
Query: 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---------------- 521
S+ W + + F + D D+DG IT + + E
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 522 -ADIDKDGRISLSEF 535
+ I + F
Sbjct: 61 LTAVAGGKGIDETTF 75
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 36.2 bits (82), Expect = 0.004
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 459 DFSEFVAATLHVHQLEEHDSEKW 481
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 70.8 bits (173), Expect = 7e-16
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 392 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 451
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 452 CNTDGLVDFSEFVAATLH 469
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 50.3 bits (120), Expect = 1e-08
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512
++ G +D + A E SE+ + F+ D D G IT +EL+
Sbjct: 1 HSSGHIDDDDKHMA--------ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52
Query: 513 GS------IDPLLEEADIDKDGRISLSEF 535
GS I L++ ADIDK G I EF
Sbjct: 53 GSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 73.1 bits (178), Expect = 9e-16
Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------------WKLKESRVLEILQAI 450
L+ +FD D D NG++ + + + +
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--QAAFEKFDIDRDGFITPEELRMH 508
+DG + +F+ T ++ + S L + D + DG I +E
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127
Query: 509 TGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSP 553
G + D + +G +SL E +R R
Sbjct: 128 LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR-DFHFGRLDVELL 175
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.3 bits (179), Expect = 1e-15
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 26/161 (16%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
EL L F + +G ++ E +Q A+ P + + A D G
Sbjct: 10 FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-------- 509
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 121
Query: 510 ----------GLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ +D ++ D +KDG ++L EF +
Sbjct: 122 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.4 bits (171), Expect = 4e-15
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTDGLVDFSE 462
+ ++ F+ D +G I + + + L + VL++L D VDF
Sbjct: 1 EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 59
Query: 463 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPL- 518
F+ V + + + +L F FD + +G + ELR G K + + +
Sbjct: 60 FLPMLQAVAKNRGQGTYEDYL---EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVE 116
Query: 519 -LEEADIDKDGRISLSEFRRLL 539
+ D +G I+ F + +
Sbjct: 117 TVLAGHEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (89), Expect = 4e-04
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466
+ F D + NG + E+R L K+ E V +L +++G +++ F+
Sbjct: 80 LEGFRVFDKEGNGKVMGAELRHV-LTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKH 137
Query: 467 TL 468
L
Sbjct: 138 IL 139
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 68.8 bits (168), Expect = 7e-15
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 445 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+I +A+D +G + +F A + F+ D D GFI E
Sbjct: 10 DIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKK--------VFKAIDADASGFIEEE 61
Query: 504 ELRMH------TGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
EL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 109
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.1 bits (122), Expect = 9e-09
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 452
L D++ F AID D +G I EE++ L L ++ L+A D
Sbjct: 32 LVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADK 91
Query: 453 NTDGLVDFSEFVA 465
+ DG + EF
Sbjct: 92 DGDGKIGIDEFET 104
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 70.8 bits (172), Expect = 8e-15
Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 20/163 (12%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAID-- 451
+ + + FD +D++ NG I+L+E+ + D L ++++ ++
Sbjct: 8 DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR 67
Query: 452 ---CNTDGLVDFSEFVAA-----TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+ F +F+ T + + ++ A F+ FD D G IT +
Sbjct: 68 GCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 127
Query: 504 ELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 540
E + + + G + D+D G + + E R
Sbjct: 128 EWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 69.3 bits (168), Expect = 2e-14
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 455 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 513
G +D+ EF+AAT+H+++LE + +AF FD D G+IT +E++ G
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE------NLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 514 ---SIDPLLEEADIDKDGRISLSEFRRLLR 540
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 68.1 bits (165), Expect = 7e-14
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 22/165 (13%)
Query: 398 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLPW--------------KLKESR 442
L+D + ++ FD D++ +GSI + + + E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 443 VLEILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
++ D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 500 ITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540
+ EE + + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 68.0 bits (165), Expect = 7e-14
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 396 STLDDEELADLRDQFDAID--VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 453
+ E+ L + F I V +G I+ EE + AL K + + D
Sbjct: 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF--ADRVFDLFDTK 66
Query: 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 506
+G++ F EF H + + +F+ +D+ + GFI +E++
Sbjct: 67 HNGILGFEEF-----ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121
Query: 507 -------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
T ++ ID EEAD DG+I E+R L+
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.2 bits (163), Expect = 2e-13
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 30/181 (16%)
Query: 382 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 439
K L + L L +EEL+ F +G I+ +E + +K P
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61
Query: 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
++ + ++ D N+DG +DF E+V A + + +W AF +D+D +G
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEW------AFSLYDVDGNGT 115
Query: 500 ITPEEL--------------------RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
I+ E+ + + + D +++ EF
Sbjct: 116 ISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT 175
Query: 540 R 540
Sbjct: 176 L 176
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 63.8 bits (155), Expect = 4e-13
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
LK + + + A G D+ F + + + FE D D+
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTDAQ--------VKEVFEILDKDQS 55
Query: 498 GFITPEELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 542
GFI EEL+ G + LL D D DG+I EF +++ A
Sbjct: 56 GFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 391 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQ 448
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 449 AIDCNTDGLVDFSEFVA 465
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.0 bits (160), Expect = 4e-13
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 31/167 (18%)
Query: 398 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ + A L++ + + +G++ + E ++ K + V + +A D N D
Sbjct: 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDN 73
Query: 457 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTGLK 512
+DF E+VAA V + KW F+ +D DR+G I +E + LK
Sbjct: 74 TIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCIDRQELLDIVESIYKLK 127
Query: 513 GS-------------------IDPLLEEADIDKDGRISLSEFRRLLR 540
+ +D + D + DG++SL+EF R
Sbjct: 128 KACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (156), Expect = 1e-12
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLE-ILQAIDCNT 454
L +E+ +F + + S+ Q + + +LK + E I + +
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70
Query: 455 -DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 506
+ F +F+ D + + AF FD D DG + E+L
Sbjct: 71 AKDSLSFEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRLVNCLT 125
Query: 507 --------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ +K ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 126 GEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 62.3 bits (151), Expect = 1e-12
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
LK++ V L A C+ EF A + K + AF D D+
Sbjct: 5 LKDADVAAALAA--CSAADSFKHKEFFAKVGL--------ASKSLDDVKKAFYVIDQDKS 54
Query: 498 GFITPEELRMHTGLKGSIDP---------LLEEADIDKDGRISLSEFRRLLR 540
GFI +EL++ L + D D DG I + EF +++
Sbjct: 55 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 452
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 31 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 90
Query: 453 NTDGLVDFSEFVA 465
+ DG++ EF A
Sbjct: 91 DGDGMIGVDEFAA 103
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.4 bits (146), Expect = 2e-12
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
+S L +E++A+ ++ F D D NGSIS E+ + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATV-MRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 455 DGLVDFSEFVA 465
+ ++FSEF+A
Sbjct: 60 NHQIEFSEFLA 70
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.2 bits (104), Expect = 1e-06
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
+ AF FD D +G I+ EL G ++ L+ E D+D + +I SEF L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.1 bits (148), Expect = 3e-12
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 18/107 (16%)
Query: 445 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 503
+I A+ +C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 504 ELR------MHTGLKGSIDP---LLEEADIDKDGRISLSEFRRLLRT 541
EL+ + + L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.1 bits (135), Expect = 2e-10
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 452
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 453 NTDGLVDFSEFVA 465
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (150), Expect = 4e-12
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 453
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTD 60
Query: 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--- 510
+G VDF EF+ + +K + D + L+M G
Sbjct: 61 GNGEVDFKEFIEGVSQFSV-KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 119
Query: 511 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 549
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 120 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 162
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 60.5 bits (145), Expect = 8e-12
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 410 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469
F IDV+ +G++S EE++ ++K K ++ + +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ----LLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 470 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKD 527
++ D + + ++ D+D DG +T EE+ G + + +AD + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 528 GRISLSEFRRLL 539
G I+L EF
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466
F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF FV
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 153
Query: 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ + L + F++ D + G I
Sbjct: 154 LVRLEILFK------------IFKQLDPENTGTIQ 176
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 60.5 bits (146), Expect = 2e-11
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 26/156 (16%)
Query: 397 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 448
L +EE+ D + F + + IS++E++ L + + ++
Sbjct: 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 70
Query: 449 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 506
+D + +G + EF + F KFD+D+ G ++ E+R
Sbjct: 71 LMDRDGNGKLGLVEFNILWNRIRNYLTI------------FRKFDLDKSGSMSAYEMRMA 118
Query: 507 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
L + ++ D + I F R L
Sbjct: 119 IEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 57.5 bits (139), Expect = 2e-11
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
++ F D + +G I +E + + K L ++ V E ++ D + +G++D EF+
Sbjct: 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62
Query: 465 A 465
Sbjct: 63 D 63
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 53.3 bits (128), Expect = 6e-10
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRL 538
AF+ FD + DG I +E + G ++ ++EAD D +G I + EF L
Sbjct: 5 LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 64
Query: 539 LR 540
++
Sbjct: 65 IK 66
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 57.6 bits (139), Expect = 3e-11
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 459
+++AD F D + +G IS E+ AL E R ++ ID + DG +
Sbjct: 2 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVR--RMMAEIDTDGDGFIS 59
Query: 460 FSEFVA 465
F EF
Sbjct: 60 FDEFTD 65
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 49.5 bits (118), Expect = 2e-08
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 486 QAAFEKFDIDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ F++FD + DG I+ EL + + + ++ E D D DG IS EF R
Sbjct: 9 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 68
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 57.3 bits (138), Expect = 3e-11
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E +A+ + FD D D G IS +E+ + + + I++ +D + G
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 66
Query: 458 VDFSEFVA 465
+DF EF+
Sbjct: 67 IDFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 47.3 bits (112), Expect = 1e-07
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
+AAF+ FD D G I+ +EL + G +D ++EE D D G I EF ++
Sbjct: 17 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 57.7 bits (139), Expect = 4e-11
Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 19/114 (16%)
Query: 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 497
L + + + A D +F +K + F D D+
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMV--------GLKKKSADDVKKVFHILDKDKS 55
Query: 498 GFITPEELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 542
GFI +EL L+ D D DG+I + EF L+ +
Sbjct: 56 GFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 51.9 bits (124), Expect = 5e-09
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 452
L + D++ F +D DK+G I +E+ L L ++ A D
Sbjct: 32 MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDK 91
Query: 453 NTDGLVDFSEFVA 465
+ DG + EF
Sbjct: 92 DGDGKIGVEEFST 104
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 56.1 bits (135), Expect = 6e-11
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +E++A+ ++ F D D +G+I+ +E+ + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGT 60
Query: 458 VDFSEFVA 465
+DF EF+
Sbjct: 61 IDFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 42.7 bits (100), Expect = 3e-06
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539
+ AF FD D DG IT +EL G + ++ E D D +G I EF ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-10
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 392 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 450
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 61
Query: 451 DCNTDGLVDFSEFVA 465
D + G VDF EF+
Sbjct: 62 DEDGSGTVDFDEFLV 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 44.6 bits (105), Expect = 1e-06
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 486 QAAFEKFDID-RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 538
+AAF+ F + DG I+ +EL + G + +++E D D G + EF +
Sbjct: 18 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 77
Query: 539 L 539
+
Sbjct: 78 M 78
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 55.6 bits (134), Expect = 1e-10
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ + ++ F D D +G+I+++++R+ K+L L E + E++ D N D +
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVA-KELGENLTEEELQEMIAEADRNDDNEI 62
Query: 459 DFSEFVA 465
D EF+
Sbjct: 63 DEDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 54.1 bits (130), Expect = 4e-10
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDG 528
E DS + AF FD D G IT ++LR G + ++ EAD + D
Sbjct: 4 ERDSRE---EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 529 RISLSEFRRLLRTASI 544
I EF R+++ S+
Sbjct: 61 EIDEDEFIRIMKKTSL 76
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 1e-10
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 25/144 (17%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFS 461
+ F A+ ++G + EE+++ L + ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 462 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 521
F + + F D D G + ELR + L +
Sbjct: 61 AFK------------ELWAALNAWKENFMTVDQDGSGTVEHHELRQ--AIGLMGYRLSPQ 106
Query: 522 ------ADIDKDGRISLSEFRRLL 539
K+GRI ++
Sbjct: 107 TLTTIVKRYSKNGRIFFDDYVACC 130
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 6e-10
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 409 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468
F +D D +G++ E+RQA+ + ++L + I++ +G + F ++VA +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCV 131
Query: 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ L + F K D + G
Sbjct: 132 KLRALTD------------FFRKRDHLQQGSAN 152
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (87), Expect = 0.001
Identities = 15/92 (16%), Positives = 23/92 (25%), Gaps = 1/92 (1%)
Query: 453 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512
DG VD E L + S + D D G + +
Sbjct: 11 GQDGEVDAEELQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69
Query: 513 GSIDPLLEEADIDKDGRISLSEFRRLLRTASI 544
+ D D G + E R+ +
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGY 101
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 1e-10
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 21/149 (14%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDG 456
+ L F A+ ++G I +E+++ L + ++ +D + G
Sbjct: 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62
Query: 457 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 514
+ F+EF ++ +H F FD DR G + P+EL+ + T
Sbjct: 63 TMGFNEFKELWAVLNGWRQH------------FISFDTDRSGTVDPQELQKALTTMGFRL 110
Query: 515 IDPLLEE--ADIDKDGRISLSEFRRLLRT 541
+ +G+I+ ++
Sbjct: 111 SPQAVNSIAKRYSTNGKITFDDYIACCVK 139
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 57.1 bits (137), Expect = 4e-10
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 26/156 (16%)
Query: 397 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 448
++E++ D R F + ++ IS E++ L + L ++
Sbjct: 10 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVD 68
Query: 449 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 506
+D + G + EF + + Q + + D+DR G + E+R
Sbjct: 69 MLDEDGSGKLGLKEF------------YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 116
Query: 507 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
L + ++ D + I F R L
Sbjct: 117 LEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 152
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466
+ + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF FV
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 151
Query: 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ + L + F++ D + G I
Sbjct: 152 LVRLEILFK------------IFKQLDPENTGTIQ 174
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.8 bits (129), Expect = 4e-10
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 463
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 464 VAA 466
+
Sbjct: 60 TSC 62
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 51.5 bits (123), Expect = 3e-09
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELR------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
+ FEKFD ++DG ++ +E R + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 540 R 540
Sbjct: 64 E 64
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.8 bits (85), Expect = 3e-04
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 500
S + + D N DG + EF FE+ D+D +G +
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREV------ALAFSPYFTQEDIVKFFEEIDVDGNGEL 54
Query: 501 TPEE 504
+E
Sbjct: 55 NADE 58
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 53.8 bits (129), Expect = 5e-10
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
F FD + DG+I EEL++ G I+ L+++ D + DGRI EF +
Sbjct: 18 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
Query: 540 R 540
+
Sbjct: 78 K 78
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 48.8 bits (116), Expect = 3e-08
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
EE +L D F D + +G I LEE++ L + E + E+++ D N DG +
Sbjct: 12 KTEE--ELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDKNNDGRI 68
Query: 459 DFSEFVA 465
D+ EF+
Sbjct: 69 DYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 35.3 bits (81), Expect = 0.002
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 426 MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 485
M + + D K +E + ++ + D N DG +D E L+
Sbjct: 1 MVRCMKDDSKGKTEE-ELSDLFRMFDKNADGYIDLEELK------IMLQATGETITEDDI 53
Query: 486 QAAFEKFDIDRDGFITPEE-LRMHTGLK 512
+ + D + DG I +E L G++
Sbjct: 54 EELMKDGDKNNDGRIDYDEFLEFMKGVE 81
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 57.3 bits (137), Expect = 1e-09
Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 387 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 446
LR L +E+ LR F + V +G S ++++Q L + E + ++
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVL-AKYADTIPEGPLKKL 163
Query: 447 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--------------------- 485
++ +T G + + VA + L + +
Sbjct: 164 FVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS 223
Query: 486 --QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 543
A F D D + E + L AD DK G++S E +++L A
Sbjct: 224 VQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAH 283
Query: 544 IS 545
I
Sbjct: 284 IP 285
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEE 521
V E L + + D D+ G ++ EE++ + + +
Sbjct: 239 DVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSV 298
Query: 522 ADIDKDGRISLSEFRRLL 539
D+D +S EF L+
Sbjct: 299 VDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 410 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465
+ D DK+G +S EE+++ L + + +D + + + EFV
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 52.1 bits (125), Expect = 2e-09
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 459
EL + +++ A + +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKE-GDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 460 FSEFVAATLHVHQ 472
F EF + Q
Sbjct: 66 FEEFQVLVKKISQ 78
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 40.6 bits (95), Expect = 2e-05
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 486 QAAFEKFDI--DRDGFITPEELR--MHTGLKG------SIDPLLEEADIDKDGRISLSEF 535
++ FEK+ ++ EEL+ + ++D L +E D + DG +S EF
Sbjct: 10 KSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69
Query: 536 RRLLR 540
+ L++
Sbjct: 70 QVLVK 74
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 51.8 bits (124), Expect = 2e-09
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539
F FD + DGFI EEL G I+ L++++D + DGRI EF +++
Sbjct: 12 ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71
Query: 540 R 540
Sbjct: 72 E 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 49.5 bits (118), Expect = 1e-08
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
EE +L + F D + +G I +EE+ + + + E + ++++ D N DG +
Sbjct: 6 KSEE--ELANCFRIFDKNADGFIDIEELGEI-LRATGEHVIEEDIEDLMKDSDKNNDGRI 62
Query: 459 DFSEFVA 465
DF EF+
Sbjct: 63 DFDEFLK 69
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 34.1 bits (78), Expect = 0.004
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 499
E + + D N DG +D E L + + D + DG
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELG------EILRATGEHVIEEDIEDLMKDSDKNNDGR 61
Query: 500 ITPEE-LRMHTGLK 512
I +E L+M G++
Sbjct: 62 IDFDEFLKMMEGVQ 75
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 2e-09
Identities = 17/148 (11%), Positives = 33/148 (22%), Gaps = 30/148 (20%)
Query: 413 IDVDKNGSISLEEMRQALAKD-LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471
+ ++ G I ++ Q D + S D + + + +
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 75
Query: 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----------------- 514
E F + ++T E L K
Sbjct: 76 PRPE---------IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQV 126
Query: 515 ---IDPLLEEADIDKDGRISLSEFRRLL 539
ID + G++S L
Sbjct: 127 QGLIDKYEPSGINAQRGQLSPEGMVWFL 154
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 53.5 bits (127), Expect = 3e-09
Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 457
L +++ ++++ F IDVD++G +S E+++ + + A+ G
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKEL-----TAMLKEAPGP 55
Query: 458 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------MHTGL 511
++F+ F ++ + AF FD + E ++
Sbjct: 56 LNFTMF-----LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN 110
Query: 512 KGSIDPLLEEADIDKDGRISLSEFRRLLR 540
K + +EA ++ G+ +F +++
Sbjct: 111 KDEMRMTFKEAPVE-GGKFDYVKFTAMIK 138
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.6 bits (127), Expect = 4e-09
Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 6/140 (4%)
Query: 406 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEF 463
+D F D G+I+ + + L P ++ ++ + +D
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 464 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE-ELRMHTGLKGS---IDPLL 519
+ ++ + + + G K + +D LL
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 520 EEADIDKDGRISLSEFRRLL 539
+ ++D +G I +F +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDV 143
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 53.4 bits (127), Expect = 6e-09
Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQAIDCN 453
EE+ R F + + +S E+ L K + ++ +D +
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----MH 508
T G + F EF + QA +++FD+DR G I EL
Sbjct: 60 TTGKLGFEEF------------KYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107
Query: 509 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 539
L + ++ D+ G + F L
Sbjct: 108 FHLNEHLYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 49.5 bits (117), Expect = 1e-07
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466
+ + DVD++G+I E+ A + + L E I++ G +DF F++
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAF-EAAGFHLNEHLYSMIIRRYSDE-GGNMDFDNFISC 137
Query: 467 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 501
+ + + AF+ D D G I
Sbjct: 138 LVRLDAMFR------------AFKSLDKDGTGQIQ 160
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 52.7 bits (125), Expect = 7e-09
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 10/151 (6%)
Query: 398 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 455
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAV-GGTHKMGE 58
Query: 456 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 514
+ F EF+ A + E+ + + F++ + G + S
Sbjct: 59 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFK-TFDREGQGFISGAELRHVLTALGERLSD 117
Query: 515 --IDPLLEEADI--DKDGRISLSEFRRLLRT 541
+D +++ D+ D +G + +F + +
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 1e-08
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------------DLPWKLKESRVL 444
D + + F D++ +G + +E+ K + +
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71
Query: 445 EILQAIDCNTDGLVDFSEFVAAT 467
+++ +D N D LV EF+A+T
Sbjct: 72 HVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.1 bits (114), Expect = 9e-08
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 24/92 (26%)
Query: 471 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----------------------MH 508
+L+ D +++ + F DI+ DG + +EL M
Sbjct: 6 EELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 63
Query: 509 TGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540
+ +++ D ++D ++L EF +
Sbjct: 64 EERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 50.0 bits (119), Expect = 2e-08
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTD 455
+ + + F DK G ++ E++R + K+ P + V +I++ +D D
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 456 GLVDFSEFVA 465
G V F F +
Sbjct: 64 GKVGFQSFFS 73
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 38.0 bits (88), Expect = 3e-04
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 487 AAFEKFDIDRDGFITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLSEF 535
F KF D G++T E+LR + ++D ++++ D +DG++ F
Sbjct: 13 FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71
Query: 536 RRLL 539
L+
Sbjct: 72 FSLI 75
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.0 bits (123), Expect = 2e-08
Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 24/164 (14%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 454
A+ + + L + F +D D++G IS E++QAL+ V I+ D
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 455 DGLVD------------------------FSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 490
V+ S + L
Sbjct: 70 KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129
Query: 491 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSE 534
KFD G I ++ + + + D D+DG I +S
Sbjct: 130 KFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 173
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 48.7 bits (116), Expect = 4e-08
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 401 EELADLRDQFDA-IDVDKNGSI-SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 458
+ L + D + + N +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 459 DFSEFVA 465
+F EF+
Sbjct: 67 NFQEFLI 73
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 35.2 bits (81), Expect = 0.002
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 487 AAFEKF-DIDRDGFI-TPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 537
+ K+ I + ++L+ K D +E DI+ DG ++ EF
Sbjct: 14 DVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLI 73
Query: 538 LL 539
L+
Sbjct: 74 LV 75
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.7 bits (113), Expect = 5e-08
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
++R+ F D D NG IS E+R +L KL + V E+++ D + DG V++ EFV
Sbjct: 4 EIREAFRVFDKDGNGYISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 62
Query: 465 A 465
Sbjct: 63 Q 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.0 bits (106), Expect = 5e-07
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 539
+ AF FD D +G+I+ ELR G +D ++ EADID DG+++ EF +++
Sbjct: 6 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 49.6 bits (117), Expect = 6e-08
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 9/142 (6%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 460
+ + + F D G I + DL ++ L + I+ VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSI-----GDLLRACGQNPTLAEITEIESTLPAEVDM 56
Query: 461 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS---IDP 517
+F+ + + + ++ F+K G + G K S +D
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDE 116
Query: 518 LLEEADIDKDGRISLSEFRRLL 539
LL+ + DG ++ +F +++
Sbjct: 117 LLKGVPVK-DGMVNYHDFVQMI 137
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.6 bits (110), Expect = 1e-07
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
D F D + G +S+ ++R L L KL ++ V E+L+ ++ +++G +D+ +F+
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.2 bits (96), Expect = 1e-05
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 486 QAAFEKFDIDRDGFITPE---ELRMHTGLKGS---IDPLLEEADIDKDGRISLSEF 535
AF+ FD + G ++ + G K + +D LL+ ++D +G I +F
Sbjct: 4 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 46.9 bits (111), Expect = 2e-07
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQ 448
++T + + + D F ++ I + + ++ P K + + ++ +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 449 AIDCNTDGLVDFSEFV 464
D N D +DFSEF+
Sbjct: 60 KKDKNEDKKIDFSEFL 75
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 46.4 bits (110), Expect = 3e-07
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLPW----KLKESRVLEIL 447
A L+ + L + F K G ++ E+++ L ++LP + E+ +++
Sbjct: 1 ACPLE-KALDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLM 58
Query: 448 QAIDCNTDGLVDFSEFVA 465
+D N D VDF E+
Sbjct: 59 SNLDSNRDNEVDFQEYCV 76
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 38.7 bits (90), Expect = 1e-04
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 15/72 (20%)
Query: 487 AAFEKFDIDRDG---FITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISL 532
+ F K+ ++G + EL+ + + L+ D ++D +
Sbjct: 13 STFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 71
Query: 533 SEFRRLLRTASI 544
E+ L ++
Sbjct: 72 QEYCVFLSCIAM 83
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.7 bits (108), Expect = 3e-07
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCNTDGLV 458
EE+ + F A + D IS EE++ + S + E+++ +D N DG V
Sbjct: 4 PEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 459 DFSEFVA 465
F EF+
Sbjct: 63 SFEEFLV 69
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 486 QAAFEKFDID--RDGFITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 535
+ AFE F I+ EEL+ ++D ++EE D + DG +S EF
Sbjct: 8 KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67
Query: 536 RRLLRTAS 543
+++ S
Sbjct: 68 LVMMKKIS 75
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 45.3 bits (107), Expect = 8e-07
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 401 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGL 457
E + + F A + S+S+ E ++ + + LP LK+ L E ++++D N D
Sbjct: 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70
Query: 458 VDFSEFVA 465
+ F+E+
Sbjct: 71 LKFNEYWR 78
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 35.6 bits (82), Expect = 0.002
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 487 AAFEKFDIDRDG---FITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 535
F F ++G ++ E + GS+D ++ D+++D + +E+
Sbjct: 18 TTFFTFA-RQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEY 76
Query: 536 RRLL 539
RL+
Sbjct: 77 WRLI 80
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 44.4 bits (105), Expect = 1e-06
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 400 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLP----WKLKESRVLEILQAIDC 452
++ +A + F + G + E+++ L K+L + +E + + +D
Sbjct: 5 EQAVAAIVCTFQEYA-GRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 63
Query: 453 NTDGLVDFSEFVA 465
N D VDF E+V
Sbjct: 64 NKDCEVDFVEYVR 76
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 35.6 bits (82), Expect = 0.002
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 13/66 (19%)
Query: 487 AAFEKF-DIDRDGF-ITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLS 533
F+++ D + + EL+ + + + D +KD +
Sbjct: 13 CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFV 72
Query: 534 EFRRLL 539
E+ R L
Sbjct: 73 EYVRSL 78
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 25/162 (15%)
Query: 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEIL 447
A ++D + +L + F A+D D +G+IS+ E+ AL+ KL
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 448 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD-------------- 493
I + + + D +AA
Sbjct: 69 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 128
Query: 494 --IDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS 533
R G + ++ + + + D ++ G+++ +
Sbjct: 129 FDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFT 170
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 43.0 bits (101), Expect = 4e-06
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDG 456
E L ++ + DK +S +E++ L +L + V +I++ +D N DG
Sbjct: 9 ETLINVFHAHSGKEGDK-YKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 457 LVDFSEFVA 465
VDF EFV
Sbjct: 68 EVDFQEFVV 76
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 36.5 bits (84), Expect = 0.001
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 487 AAFEKFDIDRDG---FITPEELRMHTGLKGS-----------IDPLLEEADIDKDGRISL 532
F ++G ++ +EL+ + S +D +++E D + DG +
Sbjct: 13 NVFHAHS-GKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDF 71
Query: 533 SEFRRLL 539
EF L+
Sbjct: 72 QEFVVLV 78
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 4e-06
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 464
+ +F+ D K +IS EE R + L + + + + N G + + +F+
Sbjct: 21 AITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 79
Query: 465 AA 466
+
Sbjct: 80 SR 81
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.7 bits (79), Expect = 0.003
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 472 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPLLEEA---DID 525
+L + + +H FE FD + I+ EE R + + ++
Sbjct: 10 RLHKAVTSHYH-AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVN 68
Query: 526 KDGRISLSEFRRLL 539
GR+ +F
Sbjct: 69 AKGRLKYPDFLSRF 82
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (98), Expect = 1e-05
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 58
Query: 457 LVDFSEFVAA 466
++D EF A
Sbjct: 59 MLDRDEFAVA 68
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 3e-05
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ E A + F D D +G +S E+R+ L L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIF---LKTGLPSTLLAHIWSLCDTKDCG 59
Query: 457 LVDFSEFVAATLHVHQ 472
+ +F A + Q
Sbjct: 60 KLSKDQFALAFHLISQ 75
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 2e-04
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE----EADIDKDGRISLSEF---RRL 538
F K D D DGF++ E+R G LL D G++S +F L
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72
Query: 539 LRTASISSRNVPPS 552
+ I + P
Sbjct: 73 ISQKLIKGIDPPHV 86
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 39.8 bits (93), Expect = 5e-05
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 400 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTD 455
D+ + L F + + ++S +E+++ + K+ + KL+++ + +++ +D N D
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 456 GLVDFSEFVA 465
V+F E+V
Sbjct: 65 QEVNFQEYVT 74
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 39.4 bits (92), Expect = 9e-05
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 400 DEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCN 453
+E L + + F ++ ++S E++Q L K+L ++ + EI Q +D N
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 454 TDGLVDFSEFV 464
D VDF EF+
Sbjct: 64 QDEQVDFQEFI 74
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 38.6 bits (90), Expect = 1e-04
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 456
L D+ Q+ + DK+ + E+++ + +L L+E + V ++++ +D + DG
Sbjct: 9 VALIDVFHQYSGREGDKH-KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDG 67
Query: 457 LVDFSEFV 464
DF EF+
Sbjct: 68 ECDFQEFM 75
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 456
E L + + D + IS E + +L + + + +++ +D ++DG
Sbjct: 9 ESLIAIFQKHAGRDGNNT-KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 67
Query: 457 LVDFSEFV 464
+DF EF+
Sbjct: 68 QLDFQEFL 75
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.5 bits (89), Expect = 2e-04
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 456
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 457 LVDFSEFVAA 466
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.5 bits (89), Expect = 2e-04
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 486 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRT 541
+ + + + G + + G D +L + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 542 ASISSRNVPPSPS 554
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 151 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (90), Expect = 3e-04
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 469 HVHQLEEHDSEKWHLRSQAA----FEKFDIDR-DGFITPEEL----RMHTGLKGSIDPLL 519
H +L D EK + F + D DG+++ EL ++
Sbjct: 59 HPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFF 118
Query: 520 EEADIDKDGRISLSEF 535
E D+D D I+L E+
Sbjct: 119 ETCDLDNDKYIALDEW 134
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 37.0 bits (86), Expect = 5e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 412 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 464
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 35.0 bits (81), Expect = 0.002
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 416 DKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 464
+++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 24 GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 77
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 33.0 bits (76), Expect = 0.004
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 488 AFEKFDIDRDGFITPEELR 506
AF FD D +G+I+ ELR
Sbjct: 8 AFRVFDKDGNGYISAAELR 26
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.85 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.84 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.83 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.83 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.83 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.82 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.8 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.8 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.8 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.8 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.79 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.78 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.78 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.75 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.74 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.74 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.73 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.73 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.72 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.72 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.72 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.71 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.71 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.71 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.7 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.67 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.67 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.66 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.65 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.65 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.65 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.65 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.64 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.64 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.62 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.61 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.56 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.53 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.52 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.39 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.38 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.38 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.37 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.31 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.31 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.31 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.31 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.3 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.3 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.29 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.28 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.28 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.27 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.27 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.26 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.25 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.25 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.25 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.24 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.23 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.22 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.2 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.2 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.19 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.19 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.17 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.16 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.15 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.14 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.13 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.12 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.12 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.11 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.1 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.1 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.09 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.08 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.06 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.06 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.05 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.04 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.04 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 98.99 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.98 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.98 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.97 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.96 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.95 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 98.95 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 98.93 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 98.93 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.92 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.92 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.91 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.89 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.89 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 98.89 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 98.89 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.88 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.88 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.88 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 98.87 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 98.85 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.84 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.82 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.8 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.79 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.77 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.77 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.76 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.76 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.72 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.72 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.72 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.71 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.71 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.7 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.69 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.69 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.67 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.66 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.65 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.65 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.63 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.63 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.63 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.59 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.58 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.58 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.57 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.55 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.55 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.54 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.53 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.53 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.5 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.48 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.47 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.46 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.46 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.43 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.42 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.41 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.37 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.27 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.26 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.17 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.12 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.09 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.05 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.01 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.91 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.9 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 97.8 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 97.78 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.74 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 97.74 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.69 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.49 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.37 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.1 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.9 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.75 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.55 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 93.98 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 90.66 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 90.57 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 89.28 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 87.77 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 85.82 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 84.52 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 84.49 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 83.34 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 81.02 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 80.61 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 80.27 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.9e-61 Score=476.48 Aligned_cols=286 Identities=38% Similarity=0.681 Sum_probs=229.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 91 ~~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
.+++.++|++.+.||+|+||+||+|.++.+|+.||||++.+.... .....+.+|+.+|+.+ +|||||++++++.+++
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 80 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKI-KHPNIVALDDIYESGG 80 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence 345677899999999999999999999999999999999765432 2345688999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.+|||||||+||+|.+++. ..+.+++..+..++.||+.||.|||++||+||||||+|||+....+++.+||+|||+|+
T Consensus 81 ~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~ 158 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 158 (307)
T ss_dssp EEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred EEEEEEeccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence 9999999999999999884 44679999999999999999999999999999999999999865567899999999999
Q ss_pred ccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCH
Q 008547 251 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329 (562)
Q Consensus 251 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (562)
.........+.+||+.|+|||++.+. ++.++|||||||+||+|++|+.||.+....++...+......++.+.++.+|+
T Consensus 159 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 238 (307)
T d1a06a_ 159 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238 (307)
T ss_dssp --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred EccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCH
Confidence 87766666778999999999998764 68999999999999999999999999999999999999888887777889999
Q ss_pred HHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhh
Q 008547 330 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 382 (562)
Q Consensus 330 ~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~~~~~l~~l~~~~~ 382 (562)
++.+||.+||..||.+|||+.++|+||||+..... ...........+++...
T Consensus 239 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~-~~~~~~~~~~~~~~~~~ 290 (307)
T d1a06a_ 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTAL-DKNIHQSVSEQIKKNFA 290 (307)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCCC-CCCCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCcc-ccccchhHHHHHHHHHH
Confidence 99999999999999999999999999999864322 22333344444554433
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-60 Score=458.17 Aligned_cols=255 Identities=29% Similarity=0.576 Sum_probs=228.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||+|++.+.........+.+.+|+.+++.+ +|||||++++++.+++.+|+|
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999765443344567889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|......
T Consensus 85 mEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a~~~~~~ 159 (263)
T d2j4za1 85 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS 159 (263)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCSCSCCCCC
T ss_pred EeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCCEeecccceeeecCCC
Confidence 9999999999988543 5799999999999999999999999999999999999998 4789999999999876543
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.....+||+.|+|||++.+. ++.++|||||||+||+|++|+.||.+.+..+++..+......++ +.+|+++.+|
T Consensus 160 -~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 234 (263)
T d2j4za1 160 -RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 234 (263)
T ss_dssp -CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHH
T ss_pred -cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHH
Confidence 34567899999999999875 58999999999999999999999999998888888887665443 4589999999
Q ss_pred HHHcCccCccCCCCHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
|.+||+.||++|||+.++|+||||+..
T Consensus 235 i~~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 235 ISRLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp HHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence 999999999999999999999999853
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-60 Score=457.67 Aligned_cols=259 Identities=33% Similarity=0.580 Sum_probs=219.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++++.||+|+||+||+|.++.+|+.||||++..... ....+.+.+|+.+|+++ +|||||++++++.+++.+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence 34579999999999999999999999999999999976542 22446789999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+||+|.+++ .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+...
T Consensus 80 ivmEy~~gg~L~~~l--~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~~~~ 154 (271)
T d1nvra_ 80 LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR 154 (271)
T ss_dssp EEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECE
T ss_pred EEEeccCCCcHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhheeec
Confidence 999999999999987 4456799999999999999999999999999999999999998 47889999999998764
Q ss_pred CCC---CcccccCCCcccCchhcccC-C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 254 PGK---KFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 254 ~~~---~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
... .....+||+.|+|||++.+. + +.++|||||||++|+|++|++||.................. ...+++.+|
T Consensus 155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s 233 (271)
T d1nvra_ 155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKID 233 (271)
T ss_dssp ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSC
T ss_pred cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCC
Confidence 332 24567899999999998764 3 56799999999999999999999876654444333333322 334456789
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+++.+||.+||+.||++|||+.++|+||||++.
T Consensus 234 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 234 SAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 999999999999999999999999999999864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-58 Score=455.27 Aligned_cols=257 Identities=28% Similarity=0.490 Sum_probs=224.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEE
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~l 174 (562)
.++|++.+.||+|+||+||+|.++.+|+.||||++...... ..+.+.+|+.+|+.+ +|||||++++++.+++.+||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i 94 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 94 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEEE
Confidence 35799999999999999999999999999999998765432 356789999999999 59999999999999999999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||||+||+|.+.+.. ..+++..++.++.||+.||.|||++|||||||||+|||++ .++++||+|||+|+.+..
T Consensus 95 vmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhheeecc
Confidence 9999999999987643 4699999999999999999999999999999999999998 478999999999987654
Q ss_pred C-CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 G-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.......+...... ....++.+|++++
T Consensus 169 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ 247 (293)
T d1yhwa1 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFR 247 (293)
T ss_dssp TTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHH
T ss_pred ccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHH
Confidence 3 344567899999999998765 589999999999999999999999988877777666654322 2223456899999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||.+||..||.+|||+.++|+||||+...
T Consensus 248 ~li~~~L~~dP~~R~s~~eil~Hp~~~~~~ 277 (293)
T d1yhwa1 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (293)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhCCCC
Confidence 999999999999999999999999998643
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-58 Score=457.49 Aligned_cols=267 Identities=36% Similarity=0.634 Sum_probs=237.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
+++.++|++++.||+|+||+||+|.++.+|+.||||++.+..... ....+.+.+|+.+|++| +|||||++++++.+
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN 84 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence 346678999999999999999999999999999999997654322 22467899999999999 59999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCC-CCCCeEEeecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFG 247 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~-~~~~vkl~DfG 247 (562)
.+.+|||||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++..+ ....+||+|||
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG 162 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred CCEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchh
Confidence 99999999999999999988544 5799999999999999999999999999999999999998532 23469999999
Q ss_pred CccccCCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
+|............+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++...++.
T Consensus 163 ~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (293)
T d1jksa_ 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242 (293)
T ss_dssp TCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred hhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCC
Confidence 99988777777778999999999998764 68999999999999999999999999999999999988877666555678
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+|+++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 243 ~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 99999999999999999999999999999999864
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.8e-58 Score=449.07 Aligned_cols=263 Identities=33% Similarity=0.623 Sum_probs=237.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc------hhhHHHHHHHHHHHHHccCCCCcceEEEEEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL------PIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~ 167 (562)
|.++|++.+.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.++++|..||||+++++++.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 3468999999999999999999999999999999997654322 1234568899999999977999999999999
Q ss_pred cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 168 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
+++.+|||||||+||+|.+++..+ +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~~kl~DFG 155 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFG 155 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCT
T ss_pred cCcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc---CCCCeEEccch
Confidence 999999999999999999998543 5799999999999999999999999999999999999998 58899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc-------CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+|+.+.........+||+.|+|||++.+ .++.++||||+||+||+|++|+.||.+.+.......+..+...++
T Consensus 156 ~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~ 235 (277)
T d1phka_ 156 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 235 (277)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred heeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 9998877666677899999999998753 247789999999999999999999999999888888998887777
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.+.++.+|+++++||.+||+.||.+|||+.++|+||||++.
T Consensus 236 ~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 236 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 77778899999999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.7e-58 Score=464.25 Aligned_cols=264 Identities=35% Similarity=0.592 Sum_probs=238.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++++.||+|+||+||+|.++.+|+.||||++.+.. ......+.+|+.+|++| +|||||+++++|.+++.+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence 3457999999999999999999999999999999987653 23456788999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+||+|.+.+. .....+++..++.++.||+.||.|||++|||||||||+||||+.. .++.+||+|||+|....
T Consensus 103 ivmE~~~gg~L~~~~~-~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 103 LILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLN 180 (352)
T ss_dssp EEEECCCCCBHHHHTT-CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECC
T ss_pred EEEEcCCCChHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc-CCCeEEEeecccceecC
Confidence 9999999999988763 234569999999999999999999999999999999999999742 46899999999999887
Q ss_pred CCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++...++.+|+++.
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 260 (352)
T d1koba_ 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260 (352)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 77667778999999999998765 68999999999999999999999999999999999999888877777889999999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
+||.+||+.||.+|||+.++|+||||+....
T Consensus 261 ~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 9999999999999999999999999987543
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-58 Score=454.42 Aligned_cols=256 Identities=33% Similarity=0.579 Sum_probs=224.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||||++.+.........+.+.+|+.+|+++ +|||||++++++.+++.+|+|
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999765433344567899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||+||+|.+++... +.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.+...
T Consensus 87 mEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~---~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECC--
T ss_pred EEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC---CCceEEecccccceecccC
Confidence 9999999999987543 6799999999999999999999999999999999999998 5789999999999876432
Q ss_pred C---CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 K---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~---~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
. .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++.++......++ ..+++++
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~ 237 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKA 237 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHH
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHH
Confidence 2 33457899999999998764 68899999999999999999999999999899999888765543 4689999
Q ss_pred HHHHHHcCccCccCCCCHHH------HhcCcccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 361 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~------~l~hp~f~~~ 361 (562)
++||.+||+.||.+|||++| +++||||+..
T Consensus 238 ~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp HHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 99999999999999999987 5889999864
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.8e-58 Score=462.78 Aligned_cols=263 Identities=34% Similarity=0.625 Sum_probs=237.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+-++|++++.||+|+||+||+|.++.+|+.||||++.... ....+.+.+|+.+|++|+ |||||++++++.+++.+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3458999999999999999999999999999999997553 235677899999999995 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
||||||+||+|.+++.. ..+.+++..++.++.||+.||.|||++|||||||||+|||++.. .++.+||+|||+|+.+.
T Consensus 100 ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 100 MIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TSCCEEECCCTTCEECC
T ss_pred EEEEcCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-CCCeEEEeecchheecc
Confidence 99999999999988743 33579999999999999999999999999999999999999742 35789999999999887
Q ss_pred CCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+......++...++.+|++++
T Consensus 178 ~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 257 (350)
T d1koaa2 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257 (350)
T ss_dssp TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHH
T ss_pred cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 76666778999999999998764 58899999999999999999999999999999999988877777666778999999
Q ss_pred HHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+||.+||+.||++|||+.++|+||||+...
T Consensus 258 ~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 258 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 999999999999999999999999999754
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-58 Score=445.03 Aligned_cols=253 Identities=21% Similarity=0.350 Sum_probs=216.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----CCeEE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVY 173 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~----~~~~~ 173 (562)
|++.+.||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+++|++++ |||||++++++.+ +..+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEE
Confidence 4788899999999999999999999999999876543 3345678999999999995 9999999999864 45789
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+||||+++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. +++.+||+|||+|+.
T Consensus 89 ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~--~~~~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL 164 (270)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGG
T ss_pred EEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC--CCCCEEEeecCccee
Confidence 999999999999988543 57999999999999999999999998 999999999999973 467899999999986
Q ss_pred cCCCCCcccccCCCcccCchhcccCCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... ......+||+.|+|||++.+.++.++|||||||++|+|++|+.||.+.... .+...+..+.. +......++++
T Consensus 165 ~~~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 241 (270)
T d1t4ha_ 165 KRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPE 241 (270)
T ss_dssp CCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHH
T ss_pred ccC-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC--CcccCccCCHH
Confidence 543 334567899999999999999999999999999999999999999776544 44455544322 11223457899
Q ss_pred HHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 331 AKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
+.+||.+||..||++|||+.|+|+||||+
T Consensus 242 ~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 242 VKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 99999999999999999999999999996
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.9e-58 Score=455.92 Aligned_cols=260 Identities=27% Similarity=0.432 Sum_probs=227.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 92 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
+++.+.|.+++.||+|+||+||+|.++.+|+.||||++...........+.+.+|+.+|++| +|||||++++++.+++.
T Consensus 11 ~dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~ 89 (309)
T d1u5ra_ 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHT 89 (309)
T ss_dssp SCHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTE
T ss_pred cCcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCE
Confidence 34556799999999999999999999999999999999876655556677899999999999 49999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+|+|||||++|+|...+. ....+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|..
T Consensus 90 ~~iv~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~~Kl~DFG~a~~ 164 (309)
T d1u5ra_ 90 AWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASI 164 (309)
T ss_dssp EEEEEECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBS
T ss_pred EEEEEEecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---CCCCEEEeecccccc
Confidence 999999999998865543 346799999999999999999999999999999999999998 578999999999987
Q ss_pred cCCCCCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 252 IKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 252 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... ....+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+....+.+..+........ ....+
T Consensus 165 ~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~ 239 (309)
T d1u5ra_ 165 MAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHW 239 (309)
T ss_dssp SSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SCTTS
T ss_pred cCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCC
Confidence 543 345689999999999853 368899999999999999999999999888888888777654322 23468
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
|+++.+||.+||..||.+|||+.++|+||||+...
T Consensus 240 s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence 99999999999999999999999999999998643
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-58 Score=452.11 Aligned_cols=257 Identities=31% Similarity=0.477 Sum_probs=224.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
+.|++++.||+|+||+||+|.++.+|+.||||++.... ....+.+.+|+++|++| +|||||++++++.+++.+|+|
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lv 87 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWIL 87 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEEE
Confidence 46999999999999999999999999999999987643 23456788999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 88 mEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 88 IEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp EECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECHHH
T ss_pred EecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhhhccCCC
Confidence 9999999999876543 46799999999999999999999999999999999999998 4789999999999764322
Q ss_pred -CCcccccCCCcccCchhcc------cCCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 256 -KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
......+||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+... ..++.+|
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s 242 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWS 242 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-SSGGGSC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CccccCC
Confidence 2234578999999999973 2357899999999999999999999999999888888887754322 2235689
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 243 ~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-57 Score=456.06 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=230.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +||||+++++++.+.+.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccccc
Confidence 4699999999999999999999999999999999865443344567889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC-
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 254 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~- 254 (562)
||||+||+|..++... ..+++..++.++.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+....
T Consensus 84 ~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~---~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 84 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCSCCT
T ss_pred eeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec---CCCCEEEeecccccccccC
Confidence 9999999999988543 6799999999999999999999999999999999999998 578999999999987643
Q ss_pred CCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
.......+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+++..+......++ ..+|+++++
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~d 234 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence 445567899999999999875 468999999999999999999999999999999999888776554 468999999
Q ss_pred HHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
||.+||++||.+|++ +.++++||||+..
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 999999999999994 8999999999863
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-57 Score=442.49 Aligned_cols=255 Identities=26% Similarity=0.475 Sum_probs=212.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~~ 173 (562)
++|++.+.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+.+++++ +|||||++++++.+ .+.+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEE
Confidence 479999999999999999999999999999999977654 344567899999999999 59999999999864 56689
Q ss_pred EEEeccCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHcC-----ceeccCCCCceEeccCCCCCCeEEeec
Q 008547 174 IAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-----iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
+|||||++|+|.+++.. .....+++..++.++.||+.||.|||+.| ||||||||+||||+ .++.+||+||
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~---~~~~vkl~DF 158 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDF 158 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC---TTSCEEECCH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC---CCCcEEEeec
Confidence 99999999999998853 24567999999999999999999999976 99999999999998 4789999999
Q ss_pred cCccccCCCC-CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 247 GLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 247 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
|+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..++...+..+.... .+
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---~~ 235 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IP 235 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CC
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---CC
Confidence 9998765433 3356789999999999865 46899999999999999999999999998888888887765432 23
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcCccc
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f 358 (562)
..+|+++.+||.+||+.||.+|||+.++|+|||+
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 4689999999999999999999999999999995
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-57 Score=452.06 Aligned_cols=263 Identities=29% Similarity=0.548 Sum_probs=236.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++-++|.+++.||+|+||+||+|.++.+|+.||||++.... .....+.+|+.+|+.+ +|||||++++++.+++.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence 34568999999999999999999999999999999997653 2445688999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||||||+||+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. +...+||+|||++...
T Consensus 77 ~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~ 154 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQL 154 (321)
T ss_dssp EEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-CceEEEEcccchhhcc
Confidence 999999999999998733 23479999999999999999999999999999999999999742 3568999999999987
Q ss_pred CCCCCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.........+||+.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+..+++..+......++...|+.+|+++
T Consensus 155 ~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 234 (321)
T d1tkia_ 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234 (321)
T ss_dssp CTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred ccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHH
Confidence 766666677899999999988654 5889999999999999999999999999999999999988777776777899999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++||.+||..||.+|||+.++|+||||++..
T Consensus 235 ~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 265 (321)
T d1tkia_ 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence 9999999999999999999999999998643
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.6e-57 Score=447.90 Aligned_cols=254 Identities=28% Similarity=0.556 Sum_probs=227.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+.+.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeE
Confidence 3699999999999999999999999999999999765433344567899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||+||+|...+. ....+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+....
T Consensus 83 mE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~---~~g~vkL~DFG~a~~~~~- 156 (316)
T d1fota_ 83 MDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYVPD- 156 (316)
T ss_dssp ECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSSCEECSS-
T ss_pred eeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc---CCCCEEEecCccceEecc-
Confidence 99999999988774 446789999999999999999999999999999999999998 578999999999987653
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+..+...++ +.+|+++.++
T Consensus 157 -~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 231 (316)
T d1fota_ 157 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDL 231 (316)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred -ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 33467899999999998765 68999999999999999999999999999999999988765443 4689999999
Q ss_pred HHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|.+||..||.+|+ |++++++||||++.
T Consensus 232 i~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 232 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 9999999999996 99999999999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-57 Score=454.79 Aligned_cols=268 Identities=29% Similarity=0.569 Sum_probs=224.0
Q ss_pred cccceeecc-eeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc----
Q 008547 94 FDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (562)
Q Consensus 94 ~~~~y~i~~-~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~---- 168 (562)
+.++|.+.. .||+|+||+||+|.++.+|+.||||++... ..+.+|+.++.++.+|||||+++++|.+
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence 345798864 699999999999999999999999998643 3467899998777679999999999875
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
+..+|||||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.....+.+||+|||+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~ 160 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 160 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccce
Confidence 56799999999999999998655556799999999999999999999999999999999999998655678899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh----CCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----NKPDFRRKP 323 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~ 323 (562)
|+...........+||+.|+|||++.+ .++.++|||||||+||+|+||++||.+.+.......+.. ....++.+.
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (335)
T d2ozaa1 161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 240 (335)
T ss_dssp CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence 998777666777899999999999876 468999999999999999999999987765554444333 333344444
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCCCCCCCc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~~~~~~~ 369 (562)
++.+|+++.+||.+||+.||++|||+.++|+||||++.......+.
T Consensus 241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~~ 286 (335)
T d2ozaa1 241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286 (335)
T ss_dssp HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCEE
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCCc
Confidence 5568999999999999999999999999999999987655444443
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-57 Score=451.13 Aligned_cols=257 Identities=26% Similarity=0.401 Sum_probs=214.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
..++|++++.||+|+||+||+|.++.+|+.||+|++.... .+.....+.+|+.+|+.+ +|||||+++++|.+.+.+|
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 80 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS 80 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence 3468999999999999999999999999999999987543 234567899999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
+||||++||+|.+++... +.+++..++.++.||+.||.|||+ +||+||||||+||||+ .++.+||+|||+|+..
T Consensus 81 iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~~~ 155 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQL 155 (322)
T ss_dssp EEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHH
T ss_pred EEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CCCCEEEeeCCCcccc
Confidence 999999999999988543 579999999999999999999997 5999999999999998 5789999999999865
Q ss_pred CCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHH--------------------
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-------------------- 311 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-------------------- 311 (562)
... ...+.+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+.......
T Consensus 156 ~~~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (322)
T d1s9ja_ 156 IDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234 (322)
T ss_dssp HHH-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred CCC-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence 432 2345799999999999876 579999999999999999999999977654322110
Q ss_pred ----------------------HHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 312 ----------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 312 ----------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+.... .+..+...+++++.+||.+||..||.+|||++++|+||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 235 RPLSSYGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp -----------CCCCHHHHHHHHHTSC--CCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccccccccccchhHHHHHhhhhccC--CccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 00000 0011112367899999999999999999999999999999864
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-56 Score=449.07 Aligned_cols=254 Identities=28% Similarity=0.500 Sum_probs=227.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+...+++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccccc
Confidence 4799999999999999999999999999999999765433344567889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+.+|+|...+... +.+++..++.++.||+.||.|||++|||||||||+||||+ .++++||+|||+|+.+...
T Consensus 120 ~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECSSC
T ss_pred cccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCCEEeeeceeeeecccc
Confidence 9999999999988544 5799999999999999999999999999999999999998 4789999999999876532
Q ss_pred CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 008547 256 KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334 (562)
Q Consensus 256 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (562)
....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+...++..+......++ +.+++++.+|
T Consensus 195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 268 (350)
T d1rdqe_ 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDL 268 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHH
T ss_pred --cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHH
Confidence 3457899999999998765 58999999999999999999999999998888888888765443 4689999999
Q ss_pred HHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 335 VKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 335 l~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
|.+||..||.+|+ |++++++||||+..
T Consensus 269 i~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 9999999999995 99999999999864
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-56 Score=442.38 Aligned_cols=257 Identities=28% Similarity=0.502 Sum_probs=225.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|+||+||+|.++.+|+.||||++.+.........+.+..|..++.+..+|||||++++++.+++.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 36999999999999999999999999999999997654333345567778888776433699999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++++||+|||+|+.....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~---~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBCCCCT
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec---CCCceeccccchhhhcccc
Confidence 999999999998854 35799999999999999999999999999999999999998 5789999999999865443
Q ss_pred -CCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..++...+....+.++ +.+|+++.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~d 232 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKD 232 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence 33455789999999999876 468999999999999999999999999999999998888765443 468999999
Q ss_pred HHHHcCccCccCCCCHH-HHhcCcccccc
Q 008547 334 FVKKLLVKDPRARLTAA-QALSHPWVREG 361 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~-~~l~hp~f~~~ 361 (562)
||.+||+.||.+|||+. ++++||||++.
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 99999999999999995 89999999864
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2e-55 Score=445.55 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=215.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHH---HHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE---VKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E---~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+| +.+++.+ +|||||++++++.+.+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCEE
Confidence 369999999999999999999999999999999875443222333444555 5555555 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+..
T Consensus 83 ~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~---~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF 157 (364)
T ss_dssp EEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---SSSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc---CCCcEEEeeeceeeec
Confidence 9999999999999988543 6789999999999999999999999999999999999998 5789999999999876
Q ss_pred CCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHH
Q 008547 253 KPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330 (562)
Q Consensus 253 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (562)
... .....+||+.|+|||++.. .++.++|||||||+||+|++|+.||.+......... ...........++.+|++
T Consensus 158 ~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~ 235 (364)
T d1omwa3 158 SKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVELPDSFSPE 235 (364)
T ss_dssp SSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSSSCCCCCCSSSCHH
T ss_pred CCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHH
Confidence 543 3445689999999999853 368999999999999999999999987665443332 222222333344579999
Q ss_pred HHHHHHHcCccCccCCCC-----HHHHhcCcccccc
Q 008547 331 AKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 361 (562)
Q Consensus 331 ~~~ll~~~l~~dP~~Rps-----~~~~l~hp~f~~~ 361 (562)
+.+||.+||..||.+||| ++++++||||+..
T Consensus 236 ~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 236 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 999999999999999999 7999999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-55 Score=434.22 Aligned_cols=257 Identities=26% Similarity=0.365 Sum_probs=212.0
Q ss_pred ecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEe
Q 008547 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (562)
Q Consensus 100 i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 177 (562)
.+++||+|+||+||+|.++.+|+.||||++....... ....+.+.+|+.+|+.+ +|||||++++++.+++.+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence 3578999999999999999999999999987543321 11235688999999999 59999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC-C
Q 008547 178 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-K 256 (562)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~-~ 256 (562)
|+.++++.... .....+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+..... .
T Consensus 81 ~~~~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~---~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 81 FMETDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp CCSEEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGSTTTSCCC
T ss_pred hhcchHHhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec---CCCccccccCccccccCCCcc
Confidence 99887665443 4556799999999999999999999999999999999999998 5789999999999876443 3
Q ss_pred CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCC------------
Q 008547 257 KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK------------ 322 (562)
Q Consensus 257 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------ 322 (562)
.....+||+.|+|||++.. .++.++|||||||++|||++|.+||.+.+..+.+..+..........
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence 3456789999999998754 35889999999999999999999999988888777765421111100
Q ss_pred ------------CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 323 ------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 323 ------------~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.++.+++++.+||.+||+.||++|||+.|+|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence 0235688999999999999999999999999999999764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-54 Score=428.01 Aligned_cols=261 Identities=26% Similarity=0.439 Sum_probs=217.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+|+.||||++..... .....+.+.+|+++|+++ +|||||++++++.+++.+|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeEE
Confidence 479999999999999999999999999999999965532 223456789999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+.+ .+...+.......+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.....
T Consensus 80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTHHHHHCCC
T ss_pred EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCcceeccCCcceeccCC
Confidence 999965 566666666667899999999999999999999999999999999999998 4789999999999876543
Q ss_pred -CCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC---------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--------- 323 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 323 (562)
......+||+.|+|||++... .+.++|||||||++|+|++|+.||.+.+..+.+..+...........
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence 334566899999999986543 47899999999999999999999998887776666543211111111
Q ss_pred ----------------CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 324 ----------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 324 ----------------~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
++.+++++.+||.+||..||.+|||+.++|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence 235688999999999999999999999999999998754
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-55 Score=424.92 Aligned_cols=253 Identities=29% Similarity=0.537 Sum_probs=213.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHcc-CCCCcceEEEEEEcC
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA-GHENVVKFYNAFEDD 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~~l~~l~-~hp~iv~l~~~~~~~ 169 (562)
+.++|++++.||+|+||+||+|.++.+|+.||||++.+...... .....+.+|+.+|+++. .|||||++++++.+.
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 45689999999999999999999999999999999876543221 11234668999999985 389999999999999
Q ss_pred CeEEEEEeccCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 NYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 ~~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
+.+|+||||+.+ +++.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++. +++.+||+|||+
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~ 157 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGS 157 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTT
T ss_pred CeEEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCCeEEECcccc
Confidence 999999999986 566666643 357999999999999999999999999999999999999984 457899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccC-C-CCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
|+.... ....+.+||+.|+|||++.+. + +.++|||||||++|+|++|+.||.+. ..+..+...++ +.
T Consensus 158 a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~ 226 (273)
T d1xwsa_ 158 GALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QR 226 (273)
T ss_dssp CEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SC
T ss_pred ceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CC
Confidence 986543 334567899999999998754 3 56789999999999999999999653 23444443333 46
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
+|+++.+||.+||..||++|||+.++|+||||++.
T Consensus 227 ~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 227 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 89999999999999999999999999999999864
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.1e-54 Score=421.25 Aligned_cols=261 Identities=28% Similarity=0.434 Sum_probs=220.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC--
Q 008547 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (562)
Q Consensus 93 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~-- 170 (562)
.+.++|++.+.||+|+||+||+|.+..+|+.||||++.+.....+.....+.+|+.+++.+ +|||||++++++...+
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCC
Confidence 3557899999999999999999999999999999999877666666778899999999999 5999999999987543
Q ss_pred --eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 --YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.+||||||++||+|...+... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||.
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~ 157 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGI 157 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTSCEEECCCTT
T ss_pred CceEEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---ccccceeehhhh
Confidence 489999999999999877443 5799999999999999999999999999999999999998 578899999999
Q ss_pred ccccCCCC----CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCC
Q 008547 249 SDFIKPGK----KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323 (562)
Q Consensus 249 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 323 (562)
+....... .....+||+.|+|||++.+. +++++|||||||++|+|+||++||.+.+..+....+....+.++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T d1o6ya_ 158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 237 (277)
T ss_dssp CEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGT
T ss_pred hhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchh
Confidence 87553322 33456899999999998764 68899999999999999999999999988888888888777666666
Q ss_pred CCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccc
Q 008547 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359 (562)
Q Consensus 324 ~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~ 359 (562)
++.+|+++.+||.+||..||.+||+..+.|.|+|.+
T Consensus 238 ~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 238 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp SSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 778999999999999999999999544555677765
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=423.83 Aligned_cols=263 Identities=26% Similarity=0.371 Sum_probs=216.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-CCEEEEEEecccccCchhhHHHHHHHHHHHHHcc--CCCCcceEEEEEE----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE---- 167 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~l~~~~~---- 167 (562)
.++|++++.||+|+||+||+|.+..+ ++.||||++....... .....+.+|+.+|+.|. +||||++++++|.
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-hHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46899999999999999999999766 5679999986543321 12334667888887774 5999999999985
Q ss_pred -cCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeec
Q 008547 168 -DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246 (562)
Q Consensus 168 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~Df 246 (562)
....++++|||+.++.+. .........+++..++.++.||+.||+|||++|||||||||+|||++ ..+.+||+||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~---~~~~~kl~df 160 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTT-YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADF 160 (305)
T ss_dssp SSEEEEEEEEECCSCBHHH-HHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECSC
T ss_pred ccCceEEEEEEeccCCchh-hhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc---CCCCeeecch
Confidence 345789999999886554 34445567799999999999999999999999999999999999998 5789999999
Q ss_pred cCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC-----
Q 008547 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR----- 320 (562)
Q Consensus 247 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----- 320 (562)
|++............+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+.+..+........
T Consensus 161 g~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (305)
T d1blxa_ 161 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 240 (305)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred hhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccc
Confidence 99987666566667899999999998865 568999999999999999999999999888777776654211000
Q ss_pred ------------------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 321 ------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 321 ------------------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
...++.+++++.+||.+||.+||++|||+.|+|+||||++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred ccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 012345789999999999999999999999999999999764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-53 Score=416.92 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=214.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++.+.||+|+||+||+|.++.+|+.||||++..... ..+.+.+|+.+|++|+ |||||+++++|.+++.+|+|
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEEE
Confidence 579999999999999999999999999999999875532 4567999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||++|+|..++.......+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+.....
T Consensus 92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFG~a~~~~~~ 168 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGD 168 (287)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCCTTTCCSS
T ss_pred eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC---CCCcEEEccccceeecCCC
Confidence 9999999999998777677899999999999999999999999999999999999998 4789999999999876543
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....||+.|+|||++.+ .++.++|||||||++|||++|..||... +...+...+..+ . ....++.+|+++
T Consensus 169 ~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~--~~~~~~~~~~~l 245 (287)
T d1opja_ 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y--RMERPEGCPEKV 245 (287)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-C--CCCCCTTCCHHH
T ss_pred CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-C--CCCCCccchHHH
Confidence 32 234468999999998764 5688999999999999999976665544 444444444333 2 223335789999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
.+||.+||+.||++|||+.++++ +|+.
T Consensus 246 ~~li~~cl~~dP~~Rps~~ei~~--~L~~ 272 (287)
T d1opja_ 246 YELMRACWQWNPSDRPSFAEIHQ--AFET 272 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHH--HHHH
Confidence 99999999999999999999975 4543
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.9e-53 Score=415.25 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=212.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++ +|+.||||++..... .....+.+.+|+.+|+++ +|||||++++++..++..+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeEE
Confidence 48999999999999999999985 789999999976543 233457889999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
+||+.++.+.... ...+.+++..+..++.||+.||+|||++|||||||||+||||+ .++.+||+|||+|......
T Consensus 79 ~e~~~~~~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~---~~~~~kl~DfG~a~~~~~~ 153 (286)
T d1ob3a_ 79 FEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLARAFGIP 153 (286)
T ss_dssp EECCSEEHHHHHH--TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHHHHHCC-
T ss_pred EEeehhhhHHHHH--hhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc---CCCCEEecccccceecccC
Confidence 9999776554433 4457899999999999999999999999999999999999998 4789999999999876433
Q ss_pred -CCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCC-----------
Q 008547 256 -KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----------- 321 (562)
Q Consensus 256 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 321 (562)
.......||+.|+|||.+.+ .++.++|||||||++|||++|+.||.+.+..+.+..+.........
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (286)
T d1ob3a_ 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (286)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhh
Confidence 23345679999999998864 3589999999999999999999999988877776665432111110
Q ss_pred --------------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccc
Q 008547 322 --------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360 (562)
Q Consensus 322 --------------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~ 360 (562)
...+.+++++.+||++||.+||++|||+.|+|+||||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 112457889999999999999999999999999999985
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-53 Score=411.59 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=204.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|+||+||+|++. ..||||++..... .....+.+.+|+.+|+++ +|||||++++++.. +.+++|
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~-~~~~lv 81 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA-PQLAIV 81 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec-cEEEEE
Confidence 57999999999999999999643 3699999875543 344678899999999999 59999999998754 568999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
||||++|+|.+++... ...+++..+..++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+.....
T Consensus 82 ~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 82 TQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCSCC----
T ss_pred EecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEEccccceeecccc
Confidence 9999999999988543 35699999999999999999999999999999999999998 5789999999999876432
Q ss_pred ---CCcccccCCCcccCchhccc----CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCC-CCC-CCCCCC
Q 008547 256 ---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-DFR-RKPWPS 326 (562)
Q Consensus 256 ---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 326 (562)
......+||+.|+|||++.+ .++.++|||||||+||||+||+.||.+.........+..... ... ....+.
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence 23346789999999999853 357889999999999999999999988766555544443322 211 223457
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+|+++.+||.+||..||.+|||+.+++++
T Consensus 238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 89999999999999999999999999865
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-53 Score=411.26 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=213.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++ ++..||||++..... ..+.+.+|+.+++++ +|||||++++++.+ +.+|+|
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~iv 85 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYII 85 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC----CHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEEE
Confidence 57999999999999999999975 577899999975432 456799999999999 59999999998765 557999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.......+++..+..++.||+.||.|||+++|+||||||+||||+ .++.+||+|||+|+.....
T Consensus 86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~---~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee---cccceeeccccceEEccCC
Confidence 9999999999877555555699999999999999999999999999999999999998 5789999999999877544
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhC-CCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....||+.|+|||++.+ .++.++|||||||++|||+|| .+||......++...+..+... .....+|+++
T Consensus 163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~---~~p~~~~~~l 239 (272)
T d1qpca_ 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPEEL 239 (272)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHH
T ss_pred ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---CCcccChHHH
Confidence 32 234678999999999864 568899999999999999995 5556666666777777655322 2225689999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc--Cccccc
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS--HPWVRE 360 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~--hp~f~~ 360 (562)
.+||.+||+.||++|||+.++++ ++||..
T Consensus 240 ~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 99999999999999999999998 788863
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=420.11 Aligned_cols=253 Identities=25% Similarity=0.345 Sum_probs=213.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC-----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|++++.||+|+||+||+|++..+++ .||+|.+..... ......+.+|+.++.++.+|||||++++++.+.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 579999999999999999999876554 699998865432 2345678999999999967999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 008547 171 YVYIAMELCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 229 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N 229 (562)
.+|+|||||++|+|.+++..... ..+++..++.++.||+.||.|||++|||||||||+|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N 194 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence 99999999999999999865432 358999999999999999999999999999999999
Q ss_pred eEeccCCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCC
Q 008547 230 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT 304 (562)
Q Consensus 230 Ill~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~ 304 (562)
||++ .++.+||+|||+|+....... ....+||+.|+|||++.+ .++.++|||||||+||||++ |++||.+..
T Consensus 195 ill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 195 VLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp EEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred cccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 9998 578999999999987654332 235678999999998764 56889999999999999997 899999887
Q ss_pred hhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....+.++......++ .++.+|+++.+||.+||+.||++|||+++|++|
T Consensus 272 ~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 272 VDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7777777776654333 335689999999999999999999999999875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.2e-52 Score=419.39 Aligned_cols=253 Identities=26% Similarity=0.508 Sum_probs=212.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc--CCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~--~~~~~ 173 (562)
++|++++.||+|+||+||+|+++.+|+.||||++... ..+.+.+|+.+|+.+.+||||+++++++.. ...++
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 4799999999999999999999999999999998654 346788999999999779999999999974 45799
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+|||||.+++|.... +.+++..++.++.||+.||.|||++||+||||||+|||++. ++..+||+|||+|....
T Consensus 109 ~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 109 LVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEECC
T ss_pred EEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeecccccceecc
Confidence 999999999986643 56999999999999999999999999999999999999984 34579999999999887
Q ss_pred CCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChh-hHHHHHHh-------------CCC
Q 008547 254 PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR-------------NKP 317 (562)
Q Consensus 254 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~-------------~~~ 317 (562)
........++|+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.. ...
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 7777777899999999998765 3588999999999999999999999765432 21111110 000
Q ss_pred C--------------------CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 318 D--------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 318 ~--------------------~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
. +....+..+++++.+||++||++||++|||++++|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0 0111123478999999999999999999999999999999874
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-52 Score=411.61 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=203.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
.+|++.+.||+|+||+||+|.++.+|+ .||||.+.... .....+.+.+|+.+|++| +|||||++++++..++.+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEE
Confidence 479999999999999999999887765 58889876543 344567899999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+|||||++|+|.+++.. ..+.+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+..
T Consensus 103 ~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFL 178 (299)
T ss_dssp EEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC------
T ss_pred EEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC---CCCcEEECCcccceEc
Confidence 999999999999987653 345799999999999999999999999999999999999998 5789999999999876
Q ss_pred CCCCCc------ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCC
Q 008547 253 KPGKKF------QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324 (562)
Q Consensus 253 ~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 324 (562)
...... ....||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+....++...+..+.. .+..
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~---~~~~ 255 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR---LPPP 255 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCC
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCC
Confidence 543221 22457899999999865 56889999999999999998 8999999988888887766532 2234
Q ss_pred CCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 325 ~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..+|+++.+||.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 5789999999999999999999999998753
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-52 Score=418.99 Aligned_cols=255 Identities=28% Similarity=0.430 Sum_probs=212.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc------CC
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------DN 170 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------~~ 170 (562)
+|..+++||+|+||+||+|+++.+|+.||||++...... ..+|+.+|++| +||||++++++|.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-------~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-------CCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-------HHHHHHHHHhc-CCCCCCcEEEEEEecCccCCce
Confidence 699999999999999999999999999999999765422 24799999999 59999999999853 34
Q ss_pred eEEEEEeccCCCChHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 YVYIAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
++|||||||+++ +...+. ......+++..++.++.||+.||+|||++||+||||||+||||+. +...+||+|||+
T Consensus 93 ~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--~~~~~kl~DFG~ 169 (350)
T d1q5ka_ 93 YLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169 (350)
T ss_dssp EEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TTCCEEECCCTT
T ss_pred EEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--CCCceeEecccc
Confidence 689999999765 433332 234567999999999999999999999999999999999999984 345899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC----------
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---------- 316 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~---------- 316 (562)
|..........+.+||+.|+|||.+.+ .++.++|||||||++|||++|++||...+..+.+..+....
T Consensus 170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence 988776666677899999999998754 46899999999999999999999998888777666654310
Q ss_pred -------CCCC--------CCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 -------PDFR--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 -------~~~~--------~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
..++ ....+.+++++.+||.+||.+||++|||+.|+|+||||++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 0000 011245789999999999999999999999999999998754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-52 Score=407.46 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=212.7
Q ss_pred cceeecce-eeccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKL-LGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~-lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|.+.+. ||+|+||+||+|.++.+ +..||||++.... .....+.+.+|+.+|+++ +|||||++++++.++ .+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhC-CCCCEeeEeeeeccC-eE
Confidence 35778774 99999999999987644 4579999987543 345667899999999999 599999999999764 58
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|||||||++|+|.+++. .....+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+..
T Consensus 84 ~lvmE~~~~g~L~~~l~-~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKAL 159 (285)
T ss_dssp EEEEECCTTEEHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHhh-ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec---cCCceeeccchhhhcc
Confidence 99999999999998763 3346799999999999999999999999999999999999998 4789999999999876
Q ss_pred CCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..... ....+||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++...+..+... ...+.
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~ 236 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 236 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTT
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCc
Confidence 54332 234578999999999864 56889999999999999998 99999988888887777765432 22357
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHH---hcCccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVRE 360 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~---l~hp~f~~ 360 (562)
+|+++.+||.+||..||++|||+.++ |+|+|+.-
T Consensus 237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999888 56777753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-52 Score=404.15 Aligned_cols=247 Identities=21% Similarity=0.370 Sum_probs=202.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|.+++.||+|+||+||+|.+. +++.||||++..... ..+.+.+|+.++++++ |||||++++++..++.+|+|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEE
Confidence 46999999999999999999875 567899999976432 4467999999999995 99999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 79 ~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp EECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---GGGCEEECSCC--------
T ss_pred EEecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---CCCCeEecccchheeccCC
Confidence 999999999998754 345689999999999999999999999999999999999998 4789999999999876543
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||...+..++...+..+..... ...+++++
T Consensus 155 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l 231 (263)
T d1sm2a_ 155 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV 231 (263)
T ss_dssp ----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHH
T ss_pred CceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHH
Confidence 32 234678999999999875 56889999999999999999 5777777777777777777543222 24578999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+||.+||+.||++|||++++++|
T Consensus 232 ~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 232 YQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999999999999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-52 Score=400.01 Aligned_cols=247 Identities=22% Similarity=0.333 Sum_probs=215.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++ +++.||||++.+... ..+.+.+|+.+++++ +||||++++++|.+.+.+++|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Confidence 36889999999999999999974 678999999976543 346799999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|..++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.....
T Consensus 78 ~Ey~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~---~~~~~kl~DfG~a~~~~~~ 153 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDD 153 (258)
T ss_dssp EECCTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC---TTCCEEECCCSSCCBCSSS
T ss_pred EEccCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc---CCCcEEECcchhheeccCC
Confidence 9999999998886544 35689999999999999999999999999999999999998 5789999999999876543
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++...+..+... ..+..+++++
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l 230 (258)
T d1k2pa_ 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLASEKV 230 (258)
T ss_dssp SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---CCCTTCCHHH
T ss_pred CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCC---CCcccccHHH
Confidence 32 234678999999999865 56889999999999999998 89999999988888888765432 2235688999
Q ss_pred HHHHHHcCccCccCCCCHHHHhcC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
.+||.+||+.||++|||+.++++|
T Consensus 231 ~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 231 YTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-52 Score=413.38 Aligned_cols=259 Identities=28% Similarity=0.428 Sum_probs=210.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-------
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------- 168 (562)
++|++++.||+|+||+||+|.++.+|+.||||++...... ......+.+|+.+|+.++ ||||+++++++..
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC-------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHhc-CCCccceEeeeecccccccc
Confidence 5899999999999999999999999999999998665432 234567889999999994 9999999998865
Q ss_pred -CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 169 -DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+.+|+||||+.++.+... ......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~--~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~---~~~~~kl~dfg 162 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFG 162 (318)
T ss_dssp ---CEEEEEECCCEEHHHHH--TCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCT
T ss_pred cCceEEEEEeccCCCccchh--hhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec---CCCcEEeeecc
Confidence 4568999999987655432 34556799999999999999999999999999999999999998 57899999999
Q ss_pred CccccCCCC-----CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC
Q 008547 248 LSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320 (562)
Q Consensus 248 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 320 (562)
+|..+.... .....+||+.|+|||++.+ .+++++|||||||++|+|++|+.||.+.........+......+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 997654322 2334689999999998754 468999999999999999999999998887777666554332222
Q ss_pred CCCCCC----------------------------CCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 321 RKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 321 ~~~~~~----------------------------~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
...+.. .++++.+||.+||.+||++|||+.|+|+||||++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence 222111 26678899999999999999999999999999964
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=407.47 Aligned_cols=246 Identities=22% Similarity=0.298 Sum_probs=204.4
Q ss_pred ceeeccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEEecc
Q 008547 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (562)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 179 (562)
+.||+|+||+||+|.+. .+++.||||++..... .+...+.+.+|+.+|++| +|||||+++++|..+ ..+|||||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccC-CEEEEEEcC
Confidence 47999999999999764 4567899999865432 344567899999999999 599999999999765 578999999
Q ss_pred CCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCCCCc-
Q 008547 180 EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF- 258 (562)
Q Consensus 180 ~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~~~~- 258 (562)
++|+|.+++. ....+++..+..++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+........
T Consensus 90 ~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~---~~~~~kl~DFGla~~~~~~~~~~ 164 (277)
T d1xbba_ 90 ELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYY 164 (277)
T ss_dssp TTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTCSEE
T ss_pred CCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc---ccCcccccchhhhhhcccccccc
Confidence 9999999874 346799999999999999999999999999999999999998 4789999999999876543322
Q ss_pred ---ccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008547 259 ---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333 (562)
Q Consensus 259 ---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (562)
....||+.|+|||++.+ .++.++|||||||++|||++ |+.||.+.+..++...+..+.. .+..+.+|+++.+
T Consensus 165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~---~~~p~~~~~~~~~ 241 (277)
T d1xbba_ 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER---MGCPAGCPREMYD 241 (277)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTTCCHHHHH
T ss_pred ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcccCHHHHH
Confidence 24578999999998865 46889999999999999997 8999999888888777766542 2223568999999
Q ss_pred HHHHcCccCccCCCCHHHHh---cCccc
Q 008547 334 FVKKLLVKDPRARLTAAQAL---SHPWV 358 (562)
Q Consensus 334 ll~~~l~~dP~~Rps~~~~l---~hp~f 358 (562)
||.+||+.||++|||+.+++ +|+|+
T Consensus 242 li~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 242 LMNLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 99999999999999999984 56654
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=417.40 Aligned_cols=258 Identities=29% Similarity=0.489 Sum_probs=211.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
+.++|++++.||+|+||+||+|.++.+|+.||||++.+... .....+.+.+|+.+|+.+ +|||||+++++|...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~~ 93 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLD 93 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTT
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCcccc
Confidence 56789999999999999999999999999999999976533 445667889999999999 5999999999998654
Q ss_pred ---eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeecc
Q 008547 171 ---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247 (562)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG 247 (562)
.+|+||||+ +++|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 94 ~~~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~---~~~~~kl~Dfg 166 (346)
T d1cm8a_ 94 DFTDFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFG 166 (346)
T ss_dssp TCCCCEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCT
T ss_pred ccceEEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc---ccccccccccc
Confidence 579999999 556665542 25799999999999999999999999999999999999998 58899999999
Q ss_pred CccccCCCCCcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCC---------
Q 008547 248 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------- 316 (562)
Q Consensus 248 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------- 316 (562)
+|+.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+..+....
T Consensus 167 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (346)
T d1cm8a_ 167 LARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 244 (346)
T ss_dssp TCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHh
Confidence 9987643 3456789999999998864 34889999999999999999999998887665554433211
Q ss_pred --------------CCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 317 --------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 317 --------------~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
+..... ..+.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 111111 2346789999999999999999999999999999998754
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-51 Score=402.41 Aligned_cols=260 Identities=23% Similarity=0.403 Sum_probs=217.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.+ +||||+++++++.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeEE
Confidence 479999999999999999999999999999999976543 344678899999999999 599999999999999999999
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
++++.+++|...+ ...+.+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||.|......
T Consensus 80 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~~~~~~ 154 (292)
T d1unla_ 80 FEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EECCSEEHHHHHH--HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSC
T ss_pred eeecccccccccc--ccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchhhcccCC
Confidence 9999988877655 4557899999999999999999999999999999999999998 4678999999999876543
Q ss_pred C-CcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCC-CChhhHHHHHHhCCCCC------------
Q 008547 256 K-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF------------ 319 (562)
Q Consensus 256 ~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~~~~~~~~~------------ 319 (562)
. ......+++.|+|||++... ++.++|||||||++|+|++|+.||.. .+..+....+.......
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (292)
T d1unla_ 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred CccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence 3 33445678899999987653 48899999999999999999998654 44454555443211110
Q ss_pred -------------CCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccC
Q 008547 320 -------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362 (562)
Q Consensus 320 -------------~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~ 362 (562)
.....+.+++.+.+||.+||++||.+||||+|+|+||||++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 0111245788999999999999999999999999999998764
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-51 Score=415.54 Aligned_cols=260 Identities=28% Similarity=0.459 Sum_probs=210.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC---
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~--- 170 (562)
++.+|++++.||+|+||+||+|.++.+|+.||||++.+.. .....+.+.+|+.+|+.| +||||+++++++....
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~ 82 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ 82 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccc
Confidence 4468999999999999999999999999999999997543 344567889999999999 5999999999987543
Q ss_pred --eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 171 --YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
.+|++ +++.+|+|.+++.. ..+++..++.++.||+.||+|||++|||||||||+||||+ .++.+||+|||+
T Consensus 83 ~~~~~l~-~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~---~~~~~kl~DfG~ 155 (345)
T d1pmea_ 83 MKDVYLV-THLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGL 155 (345)
T ss_dssp CCCEEEE-EECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred cceEEEE-EeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---CCCCEEEcccCc
Confidence 34555 55668999998843 4699999999999999999999999999999999999998 578999999999
Q ss_pred ccccCCCC----CcccccCCCcccCchhccc--CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhC-------
Q 008547 249 SDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN------- 315 (562)
Q Consensus 249 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~------- 315 (562)
|....... .....+||+.|+|||++.. .++.++||||+||++|+|++|+.||.+.............
T Consensus 156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
T d1pmea_ 156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 235 (345)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred eeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence 97654322 2345689999999998743 3578899999999999999999999887765544443221
Q ss_pred ----------------CCCCCCC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 316 ----------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 316 ----------------~~~~~~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.+..... .++.+++++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 1111111 13568899999999999999999999999999999997654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-52 Score=414.55 Aligned_cols=261 Identities=26% Similarity=0.474 Sum_probs=217.1
Q ss_pred cceeecceeeccCCeEEEEEEE---cCCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
++|++++.||+|+||+||+|.+ +.+|+.||||++.+.... .....+.+.+|+.+++++.+||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 4699999999999999999987 447899999998654321 122345678999999999756999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
+++||||+.+|+|.+.+... +.+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+|+.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKE 178 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEE
T ss_pred eeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccchhh
Confidence 99999999999999988544 5688999999999999999999999999999999999998 478999999999986
Q ss_pred cCCC--CCcccccCCCcccCchhcccC---CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 252 IKPG--KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 252 ~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
.... .......||+.|+|||.+.+. ++.++|||||||+||+|++|+.||.+.........+............+.
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 258 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCccc
Confidence 5432 223457899999999988642 47789999999999999999999988766555554444332222223356
Q ss_pred CCHHHHHHHHHcCccCccCCC-----CHHHHhcCcccccc
Q 008547 327 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 361 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rp-----s~~~~l~hp~f~~~ 361 (562)
+++++.+||.+||.+||.+|| +++|+++||||+..
T Consensus 259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 899999999999999999999 58999999999863
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-51 Score=401.50 Aligned_cols=255 Identities=24% Similarity=0.343 Sum_probs=209.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 175 (562)
++|++++.||+|+||+||+|.++.+ +.||||++..... ..+.+.+|+.+++++ +|||||++++++.+ +.+++|
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~~lv 89 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 89 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhc-ccCCEeEEEEEEec-CCeEEE
Confidence 5799999999999999999998655 5799999975542 346799999999999 59999999999865 557899
Q ss_pred EeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCCC
Q 008547 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255 (562)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~~ 255 (562)
|||+++|+|..++.......+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+.....
T Consensus 90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~---~~~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDN 166 (285)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC-----
T ss_pred EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC---CCCcEEEcccchhhhccCC
Confidence 9999999999888666666799999999999999999999999999999999999998 4789999999999876543
Q ss_pred CC--cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCC-CCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHH
Q 008547 256 KK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331 (562)
Q Consensus 256 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (562)
.. .....||+.|+|||++.. .++.++|||||||++|||++|. +|+.+....+++..+..+. ..+..+.+|+++
T Consensus 167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l 243 (285)
T d1fmka3 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESL 243 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTSCHHH
T ss_pred CceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC---CCCCCcccCHHH
Confidence 32 234678999999998864 5688999999999999999955 5555556666666666543 222346789999
Q ss_pred HHHHHHcCccCccCCCCHHHHhc--CccccccCC
Q 008547 332 KDFVKKLLVKDPRARLTAAQALS--HPWVREGGD 363 (562)
Q Consensus 332 ~~ll~~~l~~dP~~Rps~~~~l~--hp~f~~~~~ 363 (562)
.+||.+||+.||++|||+.+++. ++||+...+
T Consensus 244 ~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p 277 (285)
T d1fmka3 244 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277 (285)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred HHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence 99999999999999999999988 899987643
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-51 Score=396.80 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=202.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|++++.||+|+||+||+|.+..++ ..||||++.... .....+.+.+|+.+|+++ +|||||++++++. .+.+
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCeE
Confidence 47999999999999999999987654 468899885433 345667899999999999 5999999999986 4678
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
|+||||+++|+|..++.. ....+++..++.++.||+.||.|||+++|+||||||+||+++ .++.+||+|||+|+..
T Consensus 83 ~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~---~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYM 158 (273)
T ss_dssp EEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC-------
T ss_pred EEEEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec---CCCcEEEccchhheec
Confidence 999999999999887654 346799999999999999999999999999999999999998 4788999999999876
Q ss_pred CCCC--CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCC
Q 008547 253 KPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328 (562)
Q Consensus 253 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (562)
.... ......||+.|+|||++.+ .++.++|||||||++|||++ |.+||.+.+..++...+..+.. .+.++.+|
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~ 235 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER---LPMPPNCP 235 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC---CCCCTTCC
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCC
Confidence 5332 2334578999999999865 56889999999999999998 8999999999888888877643 23346799
Q ss_pred HHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 329 NSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 329 ~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
+++.+||.+||..||++|||+.+++++
T Consensus 236 ~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999754
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-51 Score=411.02 Aligned_cols=260 Identities=30% Similarity=0.435 Sum_probs=213.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcC----
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~---- 169 (562)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||++++++...
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~ 93 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 93 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTT
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccc
Confidence 34689999999999999999999999999999999976543 334556788999999999 599999999998643
Q ss_pred -CeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 170 -NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...++|++|+.||+|.+++ ..+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|++|||+
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~---~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~---~~~~~kl~dfg~ 167 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGL 167 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCC--
T ss_pred cCceEEEEEeecCCchhhhc---ccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc---ccccccccccch
Confidence 3345667777899999877 235799999999999999999999999999999999999998 578999999999
Q ss_pred ccccCCCCCcccccCCCcccCchhcccC--CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHhCCCCCC------
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR------ 320 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------ 320 (562)
|.... .......||+.|+|||++.+. ++.++|||||||++|+|++|++||.+.+.......+........
T Consensus 168 a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T d2gfsa1 168 ARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245 (348)
T ss_dssp --CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred hcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 97643 334566899999999986553 47899999999999999999999998887766666544321111
Q ss_pred -----------------CC----CCCCCCHHHHHHHHHcCccCccCCCCHHHHhcCccccccCC
Q 008547 321 -----------------RK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363 (562)
Q Consensus 321 -----------------~~----~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~~~ 363 (562)
.. .+..+++++++||.+||+.||.+|||+.|+|+||||++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence 11 12467899999999999999999999999999999997654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-50 Score=392.65 Aligned_cols=249 Identities=21% Similarity=0.305 Sum_probs=200.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCe
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~ 171 (562)
..|.+.++||+|+||+||+|.++.++ ..||||++.... .......+.+|+.++++|+ |||||++++++.+.+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc
Confidence 46899999999999999999887655 369999986543 2345667899999999995 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccc
Q 008547 172 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251 (562)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~ 251 (562)
.++||||+.+|++.+.+.. ....+++..+..++.||+.||.|||+++|+||||||+||||+ .++.+||+|||+|+.
T Consensus 84 ~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~ 159 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSRV 159 (283)
T ss_dssp EEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC---
T ss_pred eEEEEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC---CCCeEEEcccchhhc
Confidence 9999999999998887643 446799999999999999999999999999999999999998 578999999999987
Q ss_pred cCCCCC----cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCC-CCCCCCChhhHHHHHHhCCCCCCCCCCC
Q 008547 252 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWP 325 (562)
Q Consensus 252 ~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (562)
...... .....||+.|+|||++.+ .++.++|||||||++|||++|. +|+...+..+++..+..+.. .+...
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~---~~~~~ 236 (283)
T d1mqba_ 160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LPTPM 236 (283)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCT
T ss_pred ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC---CCCch
Confidence 644322 234568999999998865 5688999999999999999954 45555566666666655432 22335
Q ss_pred CCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 326 SISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 326 ~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.+|+++.+||.+||..||++|||+.++++
T Consensus 237 ~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 237 DCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp TCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 68899999999999999999999999975
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-50 Score=409.30 Aligned_cols=257 Identities=28% Similarity=0.452 Sum_probs=201.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc------
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------ 168 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~------ 168 (562)
.++|+++++||+|+||+||+|.++.+|+.||||++.+... .......+.+|+.+|+++ +|||||+++++|..
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~ 93 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEE 93 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeccccccc
Confidence 3689999999999999999999999999999999976543 344567789999999999 59999999999963
Q ss_pred CCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccC
Q 008547 169 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 248 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~ 248 (562)
...+|+|||||.+ ++...+ ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|++|||+
T Consensus 94 ~~~~~iv~Ey~~~-~l~~~~----~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~ 165 (355)
T d2b1pa1 94 FQDVYLVMELMDA-NLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 165 (355)
T ss_dssp CCEEEEEEECCSE-EHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC
T ss_pred CceeEEEEeccch-HHHHhh----hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---cccceeeechhh
Confidence 4789999999966 455544 25689999999999999999999999999999999999998 478899999999
Q ss_pred ccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHHh-------------
Q 008547 249 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------------- 314 (562)
Q Consensus 249 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------- 314 (562)
++...........+||+.|+|||++.+ .+++++||||+||++|+|++|++||.+.+.......+..
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (355)
T d2b1pa1 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_dssp ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred hhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence 987776666677789999999999865 468899999999999999999999988776655554432
Q ss_pred ---------CCCCCCCCCC----------------CCCCHHHHHHHHHcCccCccCCCCHHHHhcCcccccc
Q 008547 315 ---------NKPDFRRKPW----------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361 (562)
Q Consensus 315 ---------~~~~~~~~~~----------------~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~hp~f~~~ 361 (562)
.........+ ...++++.+||++||..||++||||+|+|+||||++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 1111111110 0135678999999999999999999999999999874
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-50 Score=392.40 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=202.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-C--CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKAN-G--DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~-~--~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
++|++.+.||+|+||.||+|.+..+ + ..||||++.+.........+.+.+|+.+|+++ +|||||++++++.++ .+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~-~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTP-PM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS-SC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeec-ch
Confidence 4699999999999999999986433 3 36899998876655566778899999999999 599999999999764 67
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++||||+++|+|.+.+... ...+++..++.++.||+.||.|||++||+||||||+||||+. ++.+||+|||+++..
T Consensus 86 ~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~---~~~vkl~DfGl~~~~ 161 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRAL 161 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEEC
T ss_pred heeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc---ccceeeccchhhhhc
Confidence 8999999999999877654 356999999999999999999999999999999999999984 678999999999876
Q ss_pred CCCCC----cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCC
Q 008547 253 KPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326 (562)
Q Consensus 253 ~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (562)
..... .....||+.|+|||++.+. ++.++|||||||++|||+| |+.||.+.+..+....+......+ +.++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~ 239 (273)
T d1u46a_ 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPED 239 (273)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC--CCCTT
T ss_pred ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC--CCccc
Confidence 54432 2345678899999998764 5788999999999999998 899999999999988887765433 23467
Q ss_pred CCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 327 ISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 327 ~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
+|+++.+||.+||..||++|||+.+++
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~ 266 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALR 266 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 899999999999999999999999986
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-50 Score=398.74 Aligned_cols=248 Identities=22% Similarity=0.281 Sum_probs=205.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~ 172 (562)
+|++++.||+|+||+||+|.+..+|+ .||+|++.... .....+.+.+|+.+++++ +|||||+++++|.+++ .
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~-~ 85 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-V 85 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESSS-E
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC-e
Confidence 69999999999999999999988886 57888775432 234567899999999999 5999999999998754 6
Q ss_pred EEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCcccc
Q 008547 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 252 (562)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~ 252 (562)
++++||+.+|+|.+.+... ...+++..++.++.||+.||.|||++|||||||||+||||+ .++++||+|||+|+..
T Consensus 86 ~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCCSHHHHT
T ss_pred eEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---CCCCeEeeccccceec
Confidence 7888999999999877543 46799999999999999999999999999999999999998 4789999999999876
Q ss_pred CCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 253 KPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 253 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
..... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+.+..++...+..+... +..+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~p~~~ 238 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPIC 238 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC---CCCTTB
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccc
Confidence 54332 234568999999998765 56889999999999999998 89999888888877777665422 223568
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
++++.+||.+||..||.+|||+.+++.|
T Consensus 239 ~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999999999999999976
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-50 Score=399.09 Aligned_cols=252 Identities=24% Similarity=0.326 Sum_probs=210.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCE--EEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
++|++.+.||+|+||+||+|.++.+|.. ||||++.... .....+.+.+|+.+|+++.+|||||++++++.+++.+|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 4789999999999999999999888875 6777765332 23345679999999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCC
Q 008547 174 IAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~ 239 (562)
+||||+++|+|.+++... ....+++..+..++.||+.||.|||+++|+||||||+|||++ .++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---CCC
Confidence 999999999999988533 236799999999999999999999999999999999999998 467
Q ss_pred CeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCC-CCCCCCChhhHHHHHHhCCC
Q 008547 240 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 240 ~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~ 317 (562)
.+||+|||+|+............||+.|+|||.+.+ .++.++|||||||++|||++|. +||.+.+..++...+..+.
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~- 243 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY- 243 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC-
Confidence 999999999987665555556689999999999865 4688999999999999999965 6788888888887776643
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
....+..+++++.+||.+||+.||++|||+.+++++
T Consensus 244 --~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 244 --RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp --CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 223345789999999999999999999999999975
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-50 Score=388.27 Aligned_cols=243 Identities=22% Similarity=0.331 Sum_probs=201.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCeEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYI 174 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~~~l 174 (562)
++|++++.||+|+||.||+|.+ +|..||||++++.. ..+.+.+|+.+++++ +||||+++++++.+ .+.+|+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEE
Confidence 3699999999999999999986 47899999997543 456789999999999 59999999999864 566899
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
||||+++|+|.+++.......+++..++.++.||+.||.|||+.+|+||||||+|||++ .++.+||+|||+++....
T Consensus 79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC------
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec---CCCCEeecccccceecCC
Confidence 99999999999998665545689999999999999999999999999999999999998 578999999999987543
Q ss_pred CCCcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008547 255 GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332 (562)
Q Consensus 255 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (562)
. .....+|+.|+|||++. +.+++++|||||||++|||+| |++||......++...+..+.. .+..+.+++++.
T Consensus 156 ~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~ 230 (262)
T d1byga_ 156 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAVY 230 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHHH
T ss_pred C--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC---CCCCccCCHHHH
Confidence 2 33457899999999875 456889999999999999998 7999988888888888765432 222356889999
Q ss_pred HHHHHcCccCccCCCCHHHHhc
Q 008547 333 DFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 333 ~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
+||.+||..||.+|||+.++++
T Consensus 231 ~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 231 EVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcccCHhHCcCHHHHHH
Confidence 9999999999999999999975
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-49 Score=394.42 Aligned_cols=253 Identities=24% Similarity=0.304 Sum_probs=201.1
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-C
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~ 169 (562)
++|++++.||+|+||+||+|.+.. +++.||||++.... .....+.+.+|..++.++.+||||+.+++++.. +
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 479999999999999999998754 45689999986543 234567788999999988789999999998765 4
Q ss_pred CeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC
Q 008547 170 NYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235 (562)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~ 235 (562)
..+++|||||++|+|.+++.... ...+++..++.++.||+.||.|||++|||||||||+||||+
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~-- 168 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-- 168 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--
T ss_pred CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC--
Confidence 56899999999999999986542 23589999999999999999999999999999999999998
Q ss_pred CCCCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhC-CCCCCCCChhhHHH
Q 008547 236 KEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFK 310 (562)
Q Consensus 236 ~~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~ 310 (562)
.++++||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||++| .+||.+....+.+.
T Consensus 169 -~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~ 247 (299)
T d1ywna1 169 -EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 247 (299)
T ss_dssp -GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred -CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 47899999999998654332 2345689999999998865 468899999999999999986 56787776665555
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
..+.....+. ....+++++.+||.+||+.||++|||+.++++|
T Consensus 248 ~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 248 RRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5544433222 234689999999999999999999999999875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-49 Score=388.48 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=209.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC-------CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~ 168 (562)
++|.+++.||+|+||.||+|++..++ ..||||++.+.. .......+.+|...+.++.+|||||+++++|.+
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 48999999999999999999876554 479999987543 234567889999999999779999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 169 DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
++.+++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+++||||||||+|||++
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~- 169 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT- 169 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeec-
Confidence 999999999999999999986443 24589999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCC---CcccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||+++...... .....+||+.|+|||++. +.++.++|||||||++|||++ |.+||.+.....++
T Consensus 170 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~ 247 (299)
T d1fgka_ 170 --EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247 (299)
T ss_dssp --TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred --CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHH
Confidence 57899999999998764432 234567899999999875 467899999999999999998 79999888888777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
..+..+. .+ ...+.+++++.+||.+||+.||.+|||+.++++
T Consensus 248 ~~i~~~~-~~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 248 KLLKEGH-RM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHTTC-CC--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCC-CC--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 7666543 22 223568999999999999999999999999975
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.6e-49 Score=389.73 Aligned_cols=250 Identities=20% Similarity=0.249 Sum_probs=211.8
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|++++.||+|+||+||+|+++ .+++.||||++.... .....+.+.+|+.+|+++ +||||+++++++...+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~ 89 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAVGK 89 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhc-CCCCcccceeeeccCC
Confidence 47999999999999999999875 356789999987543 344567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 008547 171 YVYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 228 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~ 228 (562)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+++||||||||+
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~ 169 (301)
T d1lufa_ 90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 169 (301)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEccc
Confidence 9999999999999999885432 234889999999999999999999999999999999
Q ss_pred ceEeccCCCCCCeEEeeccCccccCCCC---CcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCC-CCCCCC
Q 008547 229 NFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDK 303 (562)
Q Consensus 229 NIll~~~~~~~~vkl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~-~pf~~~ 303 (562)
||||+ .++.+||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||++|. +||.+.
T Consensus 170 NILld---~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~ 246 (301)
T d1lufa_ 170 NCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 246 (301)
T ss_dssp GEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ceEEC---CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC
Confidence 99998 47889999999997654322 2335678999999998876 5688999999999999999985 788888
Q ss_pred ChhhHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 304 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
...++...+..+... +.+..+|+++.+||.+||+.||++|||+.++++
T Consensus 247 ~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 247 AHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp CHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 888888887766432 223578999999999999999999999999953
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-48 Score=385.47 Aligned_cols=252 Identities=26% Similarity=0.324 Sum_probs=212.7
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|++++.||+|+||.||+|.+. .+++.||||++.... .......+.+|+.+++.+.+|||||++++++.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 58999999999999999999863 466789999997654 34456789999999999977999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEecc
Q 008547 171 YVYIAMELCEGGELLDRILAKK----------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 234 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~ 234 (562)
.+++|||||++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~- 179 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT- 179 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc-
Confidence 9999999999999999886543 23589999999999999999999999999999999999998
Q ss_pred CCCCCCeEEeeccCccccCCCCC---cccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHh-CCCCCCCCChhhHH
Q 008547 235 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 309 (562)
Q Consensus 235 ~~~~~~vkl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~ 309 (562)
.++.+||+|||+++....... ....+||+.|+|||++.. .++.++|||||||++|||+| |.+||......+.+
T Consensus 180 --~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~ 257 (311)
T d1t46a_ 180 --HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (311)
T ss_dssp --TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred --ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478999999999987654332 234688999999998865 56889999999999999998 66667676666666
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.++........ ....+|+++.+||.+||+.||++|||+.++++
T Consensus 258 ~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 258 YKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 66655443222 22468899999999999999999999999984
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-48 Score=386.47 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=216.8
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~ 170 (562)
++|.+++.||+|+||+||+|.+.. ++..||||++.... .......+.+|+.+++++ +|||||++++++..++
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCC
Confidence 589999999999999999998753 35789999997543 334566789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 171 YVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+||||+ .++++|
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld---~~~~~K 173 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVK 173 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCCEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec---CCceEE
Confidence 9999999999999998875432 23578999999999999999999999999999999999998 578999
Q ss_pred EeeccCccccCCCCC---cccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhC-CCCCCCCChhhHHHHHHhCCC
Q 008547 243 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNKP 317 (562)
Q Consensus 243 l~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~ 317 (562)
|+|||+|+....... .....||+.|+|||.+.+. ++.++|||||||++|||+|| .+||.+.+..+.+..+..+..
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~ 253 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 253 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCC
Confidence 999999986643322 2345789999999988654 57899999999999999998 588888888888888776543
Q ss_pred CCCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHhc------Cccccc
Q 008547 318 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 360 (562)
Q Consensus 318 ~~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~------hp~f~~ 360 (562)
....+.+|+.+.+||.+||+.||.+|||+.++++ +|+|++
T Consensus 254 ---~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 254 ---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred ---CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence 2223568899999999999999999999999987 566654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-48 Score=386.02 Aligned_cols=261 Identities=21% Similarity=0.294 Sum_probs=205.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++++.||+|+||+||+|.+..+|+.||||++..... ...+..|+++++.+.+|++|+.+.+++.+++..+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 34589999999999999999999999999999998865432 2346789999999975556667777778899999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccC
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~ 253 (562)
+||||+ +++|...+. .....+++..+..++.||+.||+|||++|||||||||+|||++..+.+..+||+|||+|+...
T Consensus 80 ivme~~-~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~ 157 (299)
T d1ckia_ 80 MVMELL-GPSLEDLFN-FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157 (299)
T ss_dssp EEEECC-CCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred EEEEEc-CCchhhhhh-hccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence 999999 556666553 345679999999999999999999999999999999999999765567789999999998765
Q ss_pred CCC--------CcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhhHHHHHH---hCCCCC-C
Q 008547 254 PGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---RNKPDF-R 320 (562)
Q Consensus 254 ~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~---~~~~~~-~ 320 (562)
... .....+||+.|+|||++.+. ++.++|||||||++|||++|+.||...........+. ...... .
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ckia_ 158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 237 (299)
T ss_dssp CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH
T ss_pred ccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh
Confidence 432 22456899999999998764 6899999999999999999999997765543332221 111001 1
Q ss_pred CCCCCCCCHHHHHHHHHcCccCccCCCCHHH---HhcCcccccc
Q 008547 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQ---ALSHPWVREG 361 (562)
Q Consensus 321 ~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~---~l~hp~f~~~ 361 (562)
...++.+|+++.+||.+||..||++||++.+ +|+|+|.+..
T Consensus 238 ~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~ 281 (299)
T d1ckia_ 238 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281 (299)
T ss_dssp HHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence 1123568999999999999999999999874 5677776543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-47 Score=376.09 Aligned_cols=247 Identities=21% Similarity=0.240 Sum_probs=199.8
Q ss_pred eecceeeccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEc-CCeEEE
Q 008547 99 TIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYI 174 (562)
Q Consensus 99 ~i~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~-~~~~~l 174 (562)
.+.++||+|+||+||+|.+..++ ..||||++... ......+.+.+|+++|++++ ||||+++++++.. ++.+++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 106 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLV 106 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEE
Confidence 44678999999999999986654 36899998643 24556788999999999995 9999999998764 678999
Q ss_pred EEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeEEeeccCccccCC
Q 008547 175 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254 (562)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~~~~~ 254 (562)
|||||++|+|.+++. .....+++..++.++.|++.||.|||+.+|+||||||+||||+ +++.+||+|||+++....
T Consensus 107 v~E~~~~g~l~~~~~-~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---~~~~~kL~DFG~~~~~~~ 182 (311)
T d1r0pa_ 107 VLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYD 182 (311)
T ss_dssp EEECCTTCBHHHHHH-CTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSSGGGCCTTT
T ss_pred EEEEeecCchhhhhc-cccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---CCCCEEEecccchhhccc
Confidence 999999999988764 3445678899999999999999999999999999999999998 578999999999987643
Q ss_pred CCC-----cccccCCCcccCchhcc-cCCCCCcchHHHHHHHHHHHhCCCCCCCC-ChhhHHHHHHhCCCCCCCCCCCCC
Q 008547 255 GKK-----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSI 327 (562)
Q Consensus 255 ~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 327 (562)
... .....||+.|+|||.+. +.++.++|||||||++|||++|..||... +..+....+..+... . ..+.+
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~-~--~p~~~ 259 (311)
T d1r0pa_ 183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-L--QPEYC 259 (311)
T ss_dssp TTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCC-C--CCTTC
T ss_pred cccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-C--CcccC
Confidence 322 22357899999999876 45688999999999999999977777654 334445555554322 2 22467
Q ss_pred CHHHHHHHHHcCccCccCCCCHHHHhcC
Q 008547 328 SNSAKDFVKKLLVKDPRARLTAAQALSH 355 (562)
Q Consensus 328 ~~~~~~ll~~~l~~dP~~Rps~~~~l~h 355 (562)
++++.+||.+||..||++|||+.++++|
T Consensus 260 ~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 260 PDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 8999999999999999999999999876
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=9.7e-47 Score=371.28 Aligned_cols=253 Identities=20% Similarity=0.313 Sum_probs=205.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 94 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
+.++|++++.||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.|.+|+||+.+++++..+...+
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 35689999999999999999999999999999998865432 2346789999999987799999999999999999
Q ss_pred EEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccC--CCCCCeEEeeccCccc
Q 008547 174 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDSSLKATDFGLSDF 251 (562)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~--~~~~~vkl~DfG~a~~ 251 (562)
+||||+ +++|.+.+. .....++...+..++.|++.||+|||++|||||||||+|||++.. ...+.+||+|||+|+.
T Consensus 78 ~vme~~-~~~l~~~~~-~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~ 155 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLD-LCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155 (293)
T ss_dssp EEEECC-CCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEEEec-CCCHHHHHH-hhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence 999999 679888764 344679999999999999999999999999999999999999742 2357899999999987
Q ss_pred cCCC--------CCcccccCCCcccCchhcccC-CCCCcchHHHHHHHHHHHhCCCCCCCCChhh---HHHHHHhCCCC-
Q 008547 252 IKPG--------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPD- 318 (562)
Q Consensus 252 ~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~- 318 (562)
.... ......+||+.|+|||++.+. ++.++|||||||++|||++|+.||.+..... ....+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (293)
T d1csna_ 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235 (293)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence 5432 123456899999999998765 6889999999999999999999997654432 22222221111
Q ss_pred CCCCCCCCCCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 319 ~~~~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
......+.+|+++.+++..|+..+|++||+++.+.
T Consensus 236 ~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 11112356889999999999999999999987664
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=372.00 Aligned_cols=247 Identities=22% Similarity=0.280 Sum_probs=187.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCC----
Q 008547 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (562)
Q Consensus 95 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~---- 170 (562)
.++|.+.+.||+|+||.||+|++ +|+.||||++.... ........|+..+..+ +|||||++++++.+.+
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~ 74 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcce
Confidence 46799999999999999999974 68999999986542 1222233455555667 5999999999997543
Q ss_pred eEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------cCceeccCCCCceEeccCCCCCCeE
Q 008547 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------HGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~--------~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
.+|+||||+++|+|.+++.. ..+++..+..++.|++.||.|||+ +|||||||||+||||+ .++.+|
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~---~~~~~K 148 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCC 148 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC---TTSCEE
T ss_pred EEEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc---CCCCeE
Confidence 68999999999999999854 368999999999999999999996 5999999999999998 578999
Q ss_pred EeeccCccccCCCC-----CcccccCCCcccCchhcccC-------CCCCcchHHHHHHHHHHHhCCCCCCCCC------
Q 008547 243 ATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKT------ 304 (562)
Q Consensus 243 l~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~el~~g~~pf~~~~------ 304 (562)
|+|||+++...... .....+||+.|+|||++.+. ++.++|||||||+||||+||..||....
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 99999998764433 22356899999999998653 3567999999999999999988873221
Q ss_pred --------hhhHHHHHHh-CCCCCCC-CCC--CCCCHHHHHHHHHcCccCccCCCCHHHHhc
Q 008547 305 --------EDGIFKEVLR-NKPDFRR-KPW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 354 (562)
Q Consensus 305 --------~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~ll~~~l~~dP~~Rps~~~~l~ 354 (562)
.......... ....... ..+ ...+..+.+|+.+||..||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1112222222 1111000 001 112245889999999999999999999875
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-44 Score=365.86 Aligned_cols=266 Identities=26% Similarity=0.427 Sum_probs=200.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHcc----------CCCCcceEEEE
Q 008547 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----------GHENVVKFYNA 165 (562)
Q Consensus 96 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------~hp~iv~l~~~ 165 (562)
++|++++.||+|+||+||+|+++.+|+.||||++.+.. ...+.+.+|+.+++.+. +||||++++++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 57999999999999999999999999999999997543 34567788999998874 26889999988
Q ss_pred EEc--CCeEEEEEeccCCCC-hHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeccCCCC---
Q 008547 166 FED--DNYVYIAMELCEGGE-LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKED--- 238 (562)
Q Consensus 166 ~~~--~~~~~lv~e~~~~g~-L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~NIll~~~~~~--- 238 (562)
+.. ....+++++++..+. ............+++..++.++.||+.||.|||+ .||+||||||+||||+..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence 763 456677777765543 3444445566789999999999999999999998 899999999999999853211
Q ss_pred CCeEEeeccCccccCCCCCcccccCCCcccCchhccc-CCCCCcchHHHHHHHHHHHhCCCCCCCCChh------hHHHH
Q 008547 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED------GIFKE 311 (562)
Q Consensus 239 ~~vkl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~ 311 (562)
..++|+|||.|..... .....+||+.|+|||++.+ .++.++||||+||++++|++|+.||...... .....
T Consensus 169 ~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp EEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred ceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 2499999999976543 3345689999999998764 5689999999999999999999999654321 11111
Q ss_pred HHh--C-------------------------CCCCCC-----------CCCCCCCHHHHHHHHHcCccCccCCCCHHHHh
Q 008547 312 VLR--N-------------------------KPDFRR-----------KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353 (562)
Q Consensus 312 ~~~--~-------------------------~~~~~~-----------~~~~~~~~~~~~ll~~~l~~dP~~Rps~~~~l 353 (562)
... + ...... ..++..++++.+||.+||.+||.+|||++|+|
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 100 0 000000 00112356789999999999999999999999
Q ss_pred cCccccccCCCCCC
Q 008547 354 SHPWVREGGDASEI 367 (562)
Q Consensus 354 ~hp~f~~~~~~~~~ 367 (562)
+||||++......+
T Consensus 327 ~Hp~f~~~~~~~~~ 340 (362)
T d1q8ya_ 327 NHPWLKDTLGMEEI 340 (362)
T ss_dssp TCGGGTTCTTCTTC
T ss_pred cCcccCCCCCcccC
Confidence 99999976544443
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=1.1e-25 Score=205.80 Aligned_cols=166 Identities=23% Similarity=0.218 Sum_probs=122.2
Q ss_pred eeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccC---------------chhhHHHHHHHHHHHHHccCCCCcceE
Q 008547 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---------------LPIAVEDVKREVKILQALAGHENVVKF 162 (562)
Q Consensus 98 y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~~~~~E~~~l~~l~~hp~iv~l 162 (562)
+.++++||+|+||+||+|.+ .+|+.||||++...... .........+|...+.++. |++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 46889999999999999987 47899999987532110 0112344567899999995 9999998
Q ss_pred EEEEEcCCeEEEEEeccCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeccCCCCCCeE
Q 008547 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 242 (562)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~NIll~~~~~~~~vk 242 (562)
+++.. .++||||++++.+. .++...+..++.||+.+|.|||++||+||||||+|||++ +..++
T Consensus 80 ~~~~~----~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~~~~~ 142 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIW 142 (191)
T ss_dssp EEEET----TEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEE
T ss_pred EEecC----CEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----CCCEE
Confidence 86532 27999999886542 245556778999999999999999999999999999998 34599
Q ss_pred EeeccCccccCCCCCcccccCCCcccC------chhcccCCCCCcchHHHHHH
Q 008547 243 ATDFGLSDFIKPGKKFQDIVGSAYYVA------PEVLKRKSGPESDVWSIGVI 289 (562)
Q Consensus 243 l~DfG~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DiwslG~i 289 (562)
|+|||+|........ ..|.. .+.+...++.++|+||+.--
T Consensus 143 liDFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 143 IIDFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp ECCCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred EEECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence 999999976532211 11221 12344567899999997543
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.85 E-value=1.7e-21 Score=169.54 Aligned_cols=138 Identities=29% Similarity=0.539 Sum_probs=123.3
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 476 (562)
+++++++.+|+++|..+|.+++|.|+.+||..++.. .+..++...+..++..+|.+++|.|+|+||+..+........
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~- 79 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD- 79 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHh-cCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccC-
Confidence 478899999999999999999999999999999965 788899999999999999999999999999987754433211
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
....++.+|+.||.|++|+|+.+||+.++...+ +++++|+.+|.|+||+|+|+||+++|.
T Consensus 80 ----~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 80 ----SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp ----HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred ----hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 235788999999999999999999999998777 489999999999999999999999986
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.84 E-value=4.7e-21 Score=169.76 Aligned_cols=144 Identities=28% Similarity=0.484 Sum_probs=125.8
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++++++.+++++|..+|++++|.|+..||..++.. ++..+++..+..++..+|.+++|.+++.||+..+.......
T Consensus 12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~- 89 (162)
T d1topa_ 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED- 89 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH-
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhc-cCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhh-
Confidence 3467899999999999999999999999999999954 89999999999999999999999999999987765433221
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
....+...++.+|+.||.|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+++|.+.
T Consensus 90 -~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 161 (162)
T d1topa_ 90 -AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp -HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred -cccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence 1223446788899999999999999999999998777 48999999999999999999999999874
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.83 E-value=2.7e-21 Score=167.15 Aligned_cols=134 Identities=18% Similarity=0.356 Sum_probs=117.1
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++++++++++++|..+|.+++|.|+..||..+|. .+|..++..++..++. +++|.|+|++|+..+.........
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~- 74 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISE-QLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDS- 74 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHH-HHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCC-
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHH-HhhcCCCHHHHHHHHH----hccCccccccccccccccccccch-
Confidence 4789999999999999999999999999999995 4899999999988875 578999999999887754332221
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||+|++|+|+.+||+.++...+ +++++|+.+|.| +|+|+|+||+++|++.
T Consensus 75 ----~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 75 ----EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp ----HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred ----hhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence 24788999999999999999999999998877 489999999998 6999999999999874
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.83 E-value=8.2e-21 Score=167.04 Aligned_cols=146 Identities=26% Similarity=0.471 Sum_probs=124.7
Q ss_pred hccccchHHhhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
....++++++.+++++|..||.++ +|.|+..||..+|.. +|..++..++..++..++.+++|.+++++|...+.....
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 82 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHH-cCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccc
Confidence 345788999999999999999995 899999999999954 999999999999999999999999999999876554332
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.... ......++.+|+.||.|++|+|+.+||+.++...+ +++.+|+.+|.|+||+|+|+||+++|+|+
T Consensus 83 ~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g~ 156 (156)
T d1dtla_ 83 DDSK--GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 156 (156)
T ss_dssp -------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cccc--ccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcCC
Confidence 2111 12245788999999999999999999999998887 48999999999999999999999999874
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=3e-21 Score=167.86 Aligned_cols=138 Identities=30% Similarity=0.508 Sum_probs=123.3
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
.+++++++.+++++|..+|.|++|+|+.+||..++.. .|..+++..+..++..++.++.+.++|++|...+........
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND 80 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh-cCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence 5789999999999999999999999999999999955 899999999999999999999999999999987665433322
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
....++.+|+.||+|++|+|+.+||+.++...+ ++.++|..+| |+||+|+|+||+++|.
T Consensus 81 -----~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 81 -----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145 (146)
T ss_dssp -----HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred -----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence 135788899999999999999999999998777 4899999999 9999999999999985
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.6e-20 Score=162.13 Aligned_cols=135 Identities=27% Similarity=0.478 Sum_probs=120.9
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccccc
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 478 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 478 (562)
++++.++++++|..+|+|++|+|+..||..++.. ++..++...+..++..+|.+++|.|+++||...+.......
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~---- 75 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEK---- 75 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHh-cCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhh----
Confidence 4678899999999999999999999999999955 89999999999999999999999999999998776443222
Q ss_pred HHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 479 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 479 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
.....++.+|+.+|.+++|+|+.+||..++...+ ++..+|+.+|.|+||+|+|+||+++|
T Consensus 76 -~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 76 -DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp -HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred -ccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 2245788999999999999999999999998887 38999999999999999999999987
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.82 E-value=1.8e-20 Score=160.35 Aligned_cols=129 Identities=26% Similarity=0.378 Sum_probs=113.8
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 486 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~ 486 (562)
..+|..+|.|++|.|+..||..++.. ++..++..++..+|..+|.+++|.|+|+||+..+...... ........++
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~---~~~~~~~~~~ 78 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ---DLSDDKIGLK 78 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHT-TCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCC---SSHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhhhccccccccccccccccccccc---cccccccccc
Confidence 46899999999999999999999954 8999999999999999999999999999999876543322 2233345788
Q ss_pred HHHHHhcCCCCCccCHHHHHHHhcccCC--HHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 487 AAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 487 ~~F~~~D~d~~G~I~~~El~~~l~~~~~--~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
.+|+.+|.|++|+|+.+|++.++...+. +.++|..+|.|+||+|+|+||+++|
T Consensus 79 ~~F~~~D~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 79 VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHhcCcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999998874 8889999999999999999999987
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.9e-20 Score=166.20 Aligned_cols=145 Identities=28% Similarity=0.459 Sum_probs=121.7
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
|.+.++++++.+|+++|..+|+|++|.|+.+||..++.. +. .+.++.+|..+|.+++|.|+|+||+..+......
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~--~~---~~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~ 80 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL--QQ---NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK 80 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHH--HT---CTTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhc--cC---CHHHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence 678899999999999999999999999999999877632 22 2356789999999999999999999887754332
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.. ....++.+|+.+|.|++|+|+.+||..++.... .+..+|..+|.|+||+|+|+||+++|.+.
T Consensus 81 ~~-----~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 81 GD-----KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp CC-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred hh-----hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 21 135788999999999999999999999885431 26789999999999999999999999988
Q ss_pred cccCCC
Q 008547 543 SISSRN 548 (562)
Q Consensus 543 ~~~~~~ 548 (562)
.+..++
T Consensus 156 ~~~~k~ 161 (165)
T d1auib_ 156 DIHKKM 161 (165)
T ss_dssp CGGGGC
T ss_pred ChhhCc
Confidence 766554
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.80 E-value=4e-20 Score=160.42 Aligned_cols=134 Identities=16% Similarity=0.263 Sum_probs=113.3
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC--CCcccchhhHHHHHhhhhhhcccccHH
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEEHDSEK 480 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~ef~~~~~~~~~~~~~~~~~ 480 (562)
.++++++|..||.|++|.|+..||..+|. .+|..++..++..++..++.+ ++|.|+|+||+..+..........
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~-~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~--- 78 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQG--- 78 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHH-HhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccc---
Confidence 46788999999999999999999999995 489999999999999988665 688999999998776543322211
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 481 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
....++++|+.||+|++|+|+.+||+.+|...| +++.+++ .|.|+||+|+|+||+++|..
T Consensus 79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIMS 144 (145)
T ss_pred hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHhc
Confidence 234688999999999999999999999998877 3888887 48899999999999998863
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.80 E-value=3.5e-20 Score=162.12 Aligned_cols=138 Identities=22% Similarity=0.389 Sum_probs=116.8
Q ss_pred cchHHhhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 398 LDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
++++++.+++++|..||. +++|.|+..||..+|. .+|..+++.++..+. ..+.+++|.|+|+||+.++........
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~-~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~ 78 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCR-CLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQ 78 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHH-HTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHH-HhccCccHhhhhhhh-hhhccccccccccccccccccccccch
Confidence 468899999999999994 8999999999999995 599999999998764 457788999999999988765443222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCC--CCCcccHHHHHHHHHh
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADID--KDGRISLSEFRRLLRT 541 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d--~dG~i~~~eF~~~l~~ 541 (562)
.. ...+.++|+.||+|++|+|+.+||+.+|...| +++++++.+|.+ ++|+|+|+||++.|..
T Consensus 79 ~~----~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 79 GT----FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp CC----HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred hH----HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence 11 24688899999999999999999999998887 489999999965 5689999999999874
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.80 E-value=1.7e-20 Score=169.27 Aligned_cols=140 Identities=34% Similarity=0.642 Sum_probs=124.8
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
.+++++++.+|+++|..+|.|++|+|+..||..+|.. ++..++..++..++..+|.+++|.|+|++|+..+........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~-l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTT-TTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHH-cCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence 5678999999999999999999999999999999954 899999999999999999999999999999987665443322
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
. ..++.+|+.+|.+++|+|+.+||+.++...+ +++.+|+.+|.|+||+|+|+||+++|+..
T Consensus 81 ~------e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~ 145 (182)
T d1s6ia_ 81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (182)
T ss_dssp C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred H------HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhC
Confidence 2 2567799999999999999999999998766 48999999999999999999999999854
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.79 E-value=6.3e-20 Score=159.07 Aligned_cols=136 Identities=19% Similarity=0.286 Sum_probs=113.6
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
|+++++.+++++|..+|.+++|.|+.+||..+|. .+|..++..++ +..++.+.+|.|+|++|+..+.........
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~-~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~- 75 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFA-AMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKGADP- 75 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccccch-
Confidence 5788999999999999999999999999999995 48866554433 344555788999999999877643332221
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++.+|+.||++++|+|+.+||+.+|...| ++++++..+|.|+||+|+|.||+++|++.
T Consensus 76 ----~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~ 142 (145)
T d2mysb_ 76 ----EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 142 (145)
T ss_pred ----HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence 34688899999999999999999999998777 48999999999999999999999999753
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.78 E-value=7.2e-20 Score=157.60 Aligned_cols=130 Identities=20% Similarity=0.300 Sum_probs=110.6
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
..+++++|..||.+++|.|+..||..+|. .+|..++..++..+ +.+.+|.|+|++|+..+........... .
T Consensus 4 ~~~fke~F~~~D~d~dG~I~~~el~~~l~-~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~---~ 75 (140)
T d1ggwa_ 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLR-ACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGD---P 75 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHH-HTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCC---H
T ss_pred HHHHHHHHHHHCCCCCCeECHHHHHHHHH-HHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhH---H
Confidence 36789999999999999999999999995 59999999887654 5678999999999988765443322222 3
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++++|+.||+|++|+|+.+||+.+|...| +++++|+.+|.| ||+|+|+||+++|..
T Consensus 76 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence 4688999999999999999999999998766 489999999988 999999999999863
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=5.3e-20 Score=159.83 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=112.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc-CCCCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
+.++++|..||.+++|.|+.+||..+|. .+|..++.+++..++... +.+.+|.|+|++|...+...............
T Consensus 2 ~~~k~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~ 80 (146)
T d1m45a_ 2 RANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT 80 (146)
T ss_dssp CCCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred hHHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchH
Confidence 4578999999999999999999999995 489999999999999754 45667899999999887654332221111113
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+.++|+.||.+++|+|+.+||+.+|...| +++.+|..+|.|+||.|+|+||++.|.+
T Consensus 81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 4688899999999999999999999998777 4899999999999999999999987753
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.75 E-value=1.2e-18 Score=156.98 Aligned_cols=127 Identities=24% Similarity=0.376 Sum_probs=114.1
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
+.++|+++|..+|.|++|+|+..||..+|. .++..++..++..++..+|.|++|.|+|+||...+..
T Consensus 16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~-~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------------ 82 (182)
T d1y1xa_ 16 DNQELMEWFRAVDTDGSGAISVPELNAALS-SAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------------ 82 (182)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHHC-BTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------------
T ss_pred cHHHHHHHHHHHcCCCcCCCCHHHHHHHHH-HhcccCchhhhhhhhcccccccccccccccccccccc------------
Confidence 346899999999999999999999999994 4899999999999999999999999999999875532
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...+..+|+.+|.+++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.++..
T Consensus 83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~ 148 (182)
T d1y1xa_ 83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 148 (182)
T ss_dssp HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence 13567789999999999999999999999887 3899999999999999999999998753
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.74 E-value=2.3e-18 Score=156.21 Aligned_cols=136 Identities=24% Similarity=0.305 Sum_probs=110.6
Q ss_pred chHHhhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 399 DDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++-...+|+++|..|+.+ ++|.|+..||..+|. ..+...+...++.+|+.+|.|++|.|+|.||+..+........
T Consensus 16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~-~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~-- 92 (189)
T d1jbaa_ 16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFK-VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL-- 92 (189)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHH-CCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC--
T ss_pred CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHH-HcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch--
Confidence 334444555555555444 589999999999994 5888888999999999999999999999999988876544322
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------------------CHHHHHHHhcCCCCCcccHHH
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------------------SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------------------~~~~~~~~~D~d~dG~i~~~e 534 (562)
...++.+|+.||.|++|.|+.+|+..++.... .++.+|..+|.|+||.|+|+|
T Consensus 93 ----~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~E 168 (189)
T d1jbaa_ 93 ----EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE 168 (189)
T ss_dssp ----THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred ----HHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHH
Confidence 24678899999999999999999988764321 167899999999999999999
Q ss_pred HHHHHHh
Q 008547 535 FRRLLRT 541 (562)
Q Consensus 535 F~~~l~~ 541 (562)
|+++++.
T Consensus 169 F~~~~~~ 175 (189)
T d1jbaa_ 169 FVEGARR 175 (189)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.74 E-value=2.4e-18 Score=155.19 Aligned_cols=141 Identities=27% Similarity=0.403 Sum_probs=116.9
Q ss_pred ccccchHHhhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 395 ASTLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
.+.++++++..|.+.|..+|.+ ++|.|+.+||..++.. .+... ...++.+|+.+|.+++|.|+|+||+..+.....
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~~-~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~ 85 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKE-SLFADRVFDLFDTKHNGILGFEEFARALSVFHP 85 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCC-CHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHh-cCCCC-CHHHHHHHHHHccCCCCcCcHHHHHHHHHhhhc
Confidence 4779999999999999999876 6999999999999843 55544 457899999999999999999999987765432
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc----C----------CHHHHHHHhcCCCCCcccHHHHHHH
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------SIDPLLEEADIDKDGRISLSEFRRL 538 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------~~~~~~~~~D~d~dG~i~~~eF~~~ 538 (562)
... ....++.+|+.||.|++|+|+.+|++.++... + .++.+|..+|.|+||.|+|+||..+
T Consensus 86 ~~~-----~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~ 160 (183)
T d2zfda1 86 NAP-----IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL 160 (183)
T ss_dssp TSC-----HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHH
T ss_pred cCc-----HHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 211 13478889999999999999999999977532 1 1677899999999999999999999
Q ss_pred HHhc
Q 008547 539 LRTA 542 (562)
Q Consensus 539 l~~~ 542 (562)
+...
T Consensus 161 ~~~~ 164 (183)
T d2zfda1 161 VLRH 164 (183)
T ss_dssp HHHS
T ss_pred HHHC
Confidence 8763
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.73 E-value=2.6e-18 Score=154.73 Aligned_cols=139 Identities=22% Similarity=0.395 Sum_probs=115.8
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
++++++++..+.+.|.. .+++|.|+..||..++....+.......++++|..+|.+++|.|+|+||+..+........
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 56899999999988854 5678999999999999654444445677899999999999999999999988776543222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
...++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||+|+|+||.+
T Consensus 94 ------~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~ 167 (181)
T d1bjfa_ 94 ------EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 167 (181)
T ss_dssp ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH
T ss_pred ------HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 35788899999999999999999999886331 278899999999999999999999
Q ss_pred HHHhc
Q 008547 538 LLRTA 542 (562)
Q Consensus 538 ~l~~~ 542 (562)
++...
T Consensus 168 ~~~~~ 172 (181)
T d1bjfa_ 168 GAKSD 172 (181)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 98753
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.73 E-value=3.6e-18 Score=156.58 Aligned_cols=139 Identities=20% Similarity=0.268 Sum_probs=115.2
Q ss_pred ccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 474 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~ 474 (562)
.+.++..++..|.+.|. +.+++|.|+.+||..++....+...+...++.+|+.+|.+++|.|+|.||+..+.......
T Consensus 19 ~t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~ 96 (201)
T d1omra_ 19 NTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK 96 (201)
T ss_dssp GCSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSC
T ss_pred hCCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc
Confidence 35688999999988885 4567899999999999977555566677889999999999999999999998776554332
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--------------------CHHHHHHHhcCCCCCcccHHH
Q 008547 475 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------------------SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 475 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------------------~~~~~~~~~D~d~dG~i~~~e 534 (562)
. ...++.+|+.||.|++|+|+.+|+..++.... .++.+|..+|.|+||.|+|+|
T Consensus 97 ~------~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~E 170 (201)
T d1omra_ 97 T------NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKE 170 (201)
T ss_dssp G------GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHH
T ss_pred h------HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHH
Confidence 2 23678899999999999999999998775332 167899999999999999999
Q ss_pred HHHHHHh
Q 008547 535 FRRLLRT 541 (562)
Q Consensus 535 F~~~l~~ 541 (562)
|+..+..
T Consensus 171 F~~~~~~ 177 (201)
T d1omra_ 171 FIEGTLA 177 (201)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987765
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=4.5e-18 Score=153.99 Aligned_cols=139 Identities=21% Similarity=0.325 Sum_probs=115.7
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+.+++.++..|.+.|... +.+|.++..+|..++....+.......+..+|+.+|.+++|.|+|+||+..+........
T Consensus 17 t~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~ 94 (187)
T d1g8ia_ 17 TYFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 94 (187)
T ss_dssp SSSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCch
Confidence 457899999998888654 578999999999999775555556677788999999999999999999988776543222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
.++++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|+|+||++
T Consensus 95 ------~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 168 (187)
T d1g8ia_ 95 ------DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 168 (187)
T ss_dssp ------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred ------hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 35788899999999999999999998875321 277899999999999999999999
Q ss_pred HHHhc
Q 008547 538 LLRTA 542 (562)
Q Consensus 538 ~l~~~ 542 (562)
++...
T Consensus 169 ~~~~~ 173 (187)
T d1g8ia_ 169 GSKAD 173 (187)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 98753
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=4.3e-18 Score=154.46 Aligned_cols=138 Identities=21% Similarity=0.353 Sum_probs=115.9
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+.+++.++.+|.+.|.. .+.+|.|+..||..++....+.....+.++.+|..+|.+++|.|+|+||+..+........
T Consensus 20 t~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~ 97 (190)
T d1fpwa_ 20 TYFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CCSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred cCCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCch
Confidence 45889999999988854 5678999999999999775556666677899999999999999999999988776543222
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
..+++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|+|+||.+
T Consensus 98 ------~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 171 (190)
T d1fpwa_ 98 ------EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp ------THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred ------HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 24788899999999999999999998885331 178899999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
++..
T Consensus 172 ~~~~ 175 (190)
T d1fpwa_ 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHH
Confidence 8875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.72 E-value=4.9e-18 Score=152.69 Aligned_cols=128 Identities=27% Similarity=0.343 Sum_probs=111.3
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccH
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 479 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 479 (562)
.+.+.|..+|..+|.|++|+|+.+||..+|.. ++ ...+.+++..+++.+|.+++|.|+|+||+..+...
T Consensus 16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~-~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~--------- 85 (181)
T d1hqva_ 16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 85 (181)
T ss_dssp SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH---------
T ss_pred ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc---------
Confidence 44577999999999999999999999999954 55 44688999999999999999999999999766432
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||.+++|+|+.+||+.++...+ ++.+++..+|.+++|+|+|+||+.++..
T Consensus 86 ---~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~ 150 (181)
T d1hqva_ 86 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150 (181)
T ss_dssp ---HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred ---cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2456799999999999999999999998766 3888999999999999999999987743
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=4.8e-19 Score=152.35 Aligned_cols=130 Identities=20% Similarity=0.300 Sum_probs=107.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCC--CCCcccchhhHHHHHhhhhhhcccccHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATLHVHQLEEHDSEKWH 482 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~--~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 482 (562)
+++++|..||.+++|.|+..||..+|. .+|..+++.++..++..++. +++|.|+|.+|...+......... ...
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~-~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~---~~~ 76 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ---GTY 76 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHH-HhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccc---cHH
Confidence 478899999999999999999999995 59999999999999988774 578999999999877643322211 112
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
..+.++|+.||+|++|+|+.+||+.++...| +++.++. .|.|+||+|+|.||+++|
T Consensus 77 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 77 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLKHI 138 (139)
T ss_dssp -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT-TCCCTTSEEEHHHHHHHT
T ss_pred HHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHh-hCCCCCCeEeHHHHHHHh
Confidence 4578899999999999999999999998887 3777776 588999999999999886
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.71 E-value=1.3e-17 Score=150.63 Aligned_cols=152 Identities=17% Similarity=0.208 Sum_probs=119.1
Q ss_pred cchHHhhhhcccccc-ccCCCCCCCCHHHHHHHHHhhC---CCccc-----------HHHHHHHHHhcCCCCCcccchhh
Q 008547 398 LDDEELADLRDQFDA-IDVDKNGSISLEEMRQALAKDL---PWKLK-----------ESRVLEILQAIDCNTDGLVDFSE 462 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~-~D~~~~G~i~~~el~~~l~~~~---~~~~~-----------~~~~~~l~~~~d~~~~g~I~~~e 462 (562)
+++.+..+++++|.. +|.|++|.|+..||..++.+.. ..... ......++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 577889999999997 5999999999999999986521 11111 12234466778999999999999
Q ss_pred HHHHHhhhhhhcc---cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHH
Q 008547 463 FVAATLHVHQLEE---HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEF 535 (562)
Q Consensus 463 f~~~~~~~~~~~~---~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF 535 (562)
|...+........ .........+..+|+.+|.|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~EF 161 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence 9987765432211 11112234688899999999999999999999998776 6999999999999999999999
Q ss_pred HHHHHhccccCCCC
Q 008547 536 RRLLRTASISSRNV 549 (562)
Q Consensus 536 ~~~l~~~~~~~~~~ 549 (562)
..++.....+..++
T Consensus 162 ~~~~~~f~~~~~~d 175 (185)
T d2sasa_ 162 KELYYRLLTSPAAD 175 (185)
T ss_dssp HHHHHHHHHCSSCS
T ss_pred HHHHHHHhcCCCCC
Confidence 99999877666665
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.71 E-value=2.3e-17 Score=149.56 Aligned_cols=163 Identities=17% Similarity=0.285 Sum_probs=121.4
Q ss_pred ccc-chHHhhhhccccccccCCCCCCCCHHHHHHHHH----hhCCCcccHHHHHHH-----HHhcCCCCCcccchhhHHH
Q 008547 396 STL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEI-----LQAIDCNTDGLVDFSEFVA 465 (562)
Q Consensus 396 ~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~----~~~~~~~~~~~~~~l-----~~~~d~~~~g~I~~~ef~~ 465 (562)
+.| +++.+.+++++|..+|.|++|+|+.+||..++. +.++..++..+...+ +...+.+..+.|++++|..
T Consensus 5 ~~f~~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~ 84 (189)
T d1qv0a_ 5 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 84 (189)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHH
Confidence 445 568889999999999999999999999987653 346777666665443 3444667888999999988
Q ss_pred HHhhhhhhc-----ccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHH
Q 008547 466 ATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSE 534 (562)
Q Consensus 466 ~~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~e 534 (562)
.+....... ..........+..+|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~E 164 (189)
T d1qv0a_ 85 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 164 (189)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 776533211 111222335677899999999999999999999998776 389999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCCCCC
Q 008547 535 FRRLLRTASISSRNVPPSPSGHRN 558 (562)
Q Consensus 535 F~~~l~~~~~~~~~~~~~~~~~~~ 558 (562)
|++++.+.+.+.++..++=-++.-
T Consensus 165 F~~~~~~~~~~~d~~~~g~~~~~~ 188 (189)
T d1qv0a_ 165 MTRQHLGFWYTLDPEADGLYGNGV 188 (189)
T ss_dssp HHHHHHHHHTTCCGGGTTTTTTSC
T ss_pred HHHHHHHhCCCCCCCCCCcCCCCC
Confidence 999999988887775454334443
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.70 E-value=1.6e-17 Score=149.06 Aligned_cols=138 Identities=25% Similarity=0.360 Sum_probs=113.9
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
+.+++.++..+.+.|.. .+++|.|+.+||..++....+...+...++.+|..+|.+++|.|+|+||+..+........
T Consensus 8 t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 56888999998888754 4568999999999999775555556777899999999999999999999988765543322
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------------------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
...++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|||+||.+
T Consensus 86 ------~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~ 159 (178)
T d1s6ca_ 86 ------HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 159 (178)
T ss_dssp ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred ------HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 35788899999999999999999987764321 167899999999999999999999
Q ss_pred HHHh
Q 008547 538 LLRT 541 (562)
Q Consensus 538 ~l~~ 541 (562)
++..
T Consensus 160 ~i~~ 163 (178)
T d1s6ca_ 160 SCQE 163 (178)
T ss_dssp HTTS
T ss_pred HHHH
Confidence 8764
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.67 E-value=6.4e-17 Score=144.49 Aligned_cols=146 Identities=18% Similarity=0.231 Sum_probs=111.7
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhC---CCcccH-H----HHHHHHHh--cCCCCCcccchhhHHHHHh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKE-S----RVLEILQA--IDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~-~----~~~~l~~~--~d~~~~g~I~~~ef~~~~~ 468 (562)
++.++++|+.+|..+|.|++|.|+.+||..++.+.. ...... . .....+.. .+.++++.|+++||+..+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~ 80 (174)
T d2scpa_ 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMK 80 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHH
Confidence 356788999999999999999999999999885521 222211 1 12222332 2667889999999998876
Q ss_pred hhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
........ .......+..+|+.+|+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+++....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~ 159 (174)
T d2scpa_ 81 EMVKNPEA-KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFM 159 (174)
T ss_dssp HHTSCGGG-THHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred hhhcchhh-HHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhh
Confidence 54433221 222234588899999999999999999999987665 5999999999999999999999999988655
Q ss_pred c
Q 008547 545 S 545 (562)
Q Consensus 545 ~ 545 (562)
+
T Consensus 160 ~ 160 (174)
T d2scpa_ 160 N 160 (174)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.67 E-value=1.7e-17 Score=149.33 Aligned_cols=130 Identities=22% Similarity=0.372 Sum_probs=93.1
Q ss_pred cchHHhh-hhccccccccCCCCCCCCHHHHHHHHHhhCCCc--------ccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 398 LDDEELA-DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK--------LKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 398 ~~~~~~~-~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~--------~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
++++++. .++++|..+| +++|.|+..||..+|.. ++.. .+.+.++.++..+|.|++|.|+|+||...+.
T Consensus 13 ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 13 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHH-hCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 4566654 5999999999 55899999999988743 3322 4567899999999999999999999987654
Q ss_pred hhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 469 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
.. ..++.+|+.||+|++|+|+..||+.+|...| ++..++...|.|++|.|+|+||+.+|..
T Consensus 91 ~~------------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~~~~~ 156 (188)
T d1qxpa2 91 RI------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 156 (188)
T ss_dssp HH------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHH
T ss_pred hh------------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Confidence 32 3566799999999999999999999998877 3455555567899999999999988654
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.66 E-value=2.6e-17 Score=148.63 Aligned_cols=131 Identities=18% Similarity=0.293 Sum_probs=108.8
Q ss_pred cchHHh-hhhccccccccCCCCCCCCHHHHHHHHHhh-------CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 398 LDDEEL-ADLRDQFDAIDVDKNGSISLEEMRQALAKD-------LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 398 ~~~~~~-~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-------~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
.+++++ +.++++|..+| +++|.|+..||..+|... -+...+.+.+..++..+|.|++|.|+|+||...+..
T Consensus 11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 89 (186)
T d1df0a1 11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 89 (186)
T ss_dssp CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence 345555 45899999998 999999999999999552 123356788999999999999999999999876543
Q ss_pred hhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 470 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
. ..++.+|+.||+|++|+|+.+||+.+|...+ ++.+++...|.|+||.|+|+||+.+|..
T Consensus 90 ~------------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~ 154 (186)
T d1df0a1 90 I------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 154 (186)
T ss_dssp H------------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred H------------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence 2 3566799999999999999999999998777 3666777899999999999999988765
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.65 E-value=3.5e-17 Score=145.98 Aligned_cols=127 Identities=23% Similarity=0.327 Sum_probs=105.6
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC--------CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
+++.+++++|..+|. +||.|+..||..+|.. ++ ...+.+.+..++..+|.|++|.|+|+||+..+...
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~-~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~-- 76 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-- 76 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHH-HHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHH-hCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh--
Confidence 478899999999994 4899999999999965 32 23467889999999999999999999998765422
Q ss_pred hcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCC-----HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-----~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|.|+.+||+.+|...+. +.+.|..+|.|++|.|+|+||+.+|..
T Consensus 77 ----------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 77 ----------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ----------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred ----------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHH
Confidence 24567899999999999999999999987762 455566778899999999999988854
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.3e-16 Score=140.32 Aligned_cols=119 Identities=20% Similarity=0.338 Sum_probs=99.0
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCcc-----cHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-----~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
..+|+++ .+.+|.|+.+||+.+|.. +|... +.+.++.++..+|.|++|.|+|+||+..+...
T Consensus 3 ~~~F~~~-a~~dG~I~~~EL~~~L~~-~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~----------- 69 (165)
T d1k94a_ 3 YTYFSAV-AGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------- 69 (165)
T ss_dssp HHHHHHH-HGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-----------
T ss_pred HHHHHHh-cCCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc-----------
Confidence 3456666 578999999999999965 55443 56789999999999999999999998765432
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++.+|+.||+|++|+|+.+||+.++...| +++.++..+| .+|.|+|+||+.+|..
T Consensus 70 -~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d--~~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 70 -NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVK 132 (165)
T ss_dssp -HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC--BTTBCBHHHHHHHHHH
T ss_pred -chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC--CCCcCcHHHHHHHHHH
Confidence 3567799999999999999999999999887 3888999886 4689999999887654
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=5.8e-17 Score=145.21 Aligned_cols=138 Identities=24% Similarity=0.356 Sum_probs=107.0
Q ss_pred ccccchHHhhhhccccccccCCCCCC--------CCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCC-CCcccchhhHHH
Q 008547 395 ASTLDDEELADLRDQFDAIDVDKNGS--------ISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVA 465 (562)
Q Consensus 395 ~~~~~~~~~~~l~~~F~~~D~~~~G~--------i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~ef~~ 465 (562)
.+.++++++..+.+.|..+|++++|. ++.++|..+.. ...+..++++|+.+|.+ ++|.|+|+||+.
T Consensus 8 ~T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~-----l~~~~~~~rif~~fd~~~~~g~I~f~EFv~ 82 (180)
T d1xo5a_ 8 LTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-----LKANPFKERICRVFSTSPAKDSLSFEDFLD 82 (180)
T ss_dssp CCCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH-----HHTCTTHHHHHHHHCCSTTCCEECHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc-----cccChHHHHHHHhccCCCCCCcCcHHHHHH
Confidence 36789999999999999998888765 44555543221 11123467899999987 689999999998
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------C----HHHHHHHhcCCCCCcc
Q 008547 466 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------S----IDPLLEEADIDKDGRI 530 (562)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~----~~~~~~~~D~d~dG~i 530 (562)
++........ ...+++.+|+.||.|++|+|+.+||..++.... + ++.+|+.+|.|+||+|
T Consensus 83 ~l~~~~~~~~-----~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~I 157 (180)
T d1xo5a_ 83 LLSVFSDTAT-----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 157 (180)
T ss_dssp HHHHHSTTSC-----HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSB
T ss_pred HHHHHhhcCC-----HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcC
Confidence 8765533212 135788999999999999999999999886431 1 6678999999999999
Q ss_pred cHHHHHHHHHhc
Q 008547 531 SLSEFRRLLRTA 542 (562)
Q Consensus 531 ~~~eF~~~l~~~ 542 (562)
||+||.+++...
T Consensus 158 s~~EF~~~~~~~ 169 (180)
T d1xo5a_ 158 NLSEFQHVISRS 169 (180)
T ss_dssp CHHHHHHHHHHC
T ss_pred cHHHHHHHHHhC
Confidence 999999999863
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.65 E-value=3.1e-16 Score=141.68 Aligned_cols=152 Identities=19% Similarity=0.251 Sum_probs=118.3
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHh----hCCCcccHHHHHHHHH-----hcCCCCCcccchhhHHHHHhh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQ-----AIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~----~~~~~~~~~~~~~l~~-----~~d~~~~g~I~~~ef~~~~~~ 469 (562)
++..+.+++++|..+|.|++|.|+.+||..++.. .++..++..++...+. ......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 4677899999999999999999999999877643 3566666665444333 334556778999999877665
Q ss_pred hhhhcc-----cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHH
Q 008547 470 VHQLEE-----HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 538 (562)
Q Consensus 470 ~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~ 538 (562)
...... .........+..+|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||+|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 432211 11122235578899999999999999999999998766 3899999999999999999999999
Q ss_pred HHhccccCCCCC
Q 008547 539 LRTASISSRNVP 550 (562)
Q Consensus 539 l~~~~~~~~~~~ 550 (562)
+.+...+.++..
T Consensus 167 ~~~~~~~~d~~~ 178 (187)
T d1uhka1 167 HLGFWYTMDPAC 178 (187)
T ss_dssp HHHHHTTCCGGG
T ss_pred HHHhcccCCccc
Confidence 999888877653
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.64 E-value=2.6e-16 Score=127.58 Aligned_cols=94 Identities=29% Similarity=0.449 Sum_probs=77.4
Q ss_pred ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc---C-
Q 008547 438 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G- 513 (562)
Q Consensus 438 ~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~- 513 (562)
++.+++..++..+| ++|.|+|+||+..+.... .. ...++.+|+.||+|++|+|+.+||+.++... +
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~~--~~------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~ 75 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLKA--MS------ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR 75 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCTT--SC------HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHcc--CC------HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC
Confidence 45788888888775 567899999987664221 11 2467889999999999999999999998765 2
Q ss_pred -----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 -----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+++.+|+.+|.|+||+|+|+||+++|..
T Consensus 76 ~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 76 DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 3889999999999999999999999974
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.64 E-value=9.6e-17 Score=158.05 Aligned_cols=144 Identities=21% Similarity=0.297 Sum_probs=117.3
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc-
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE- 474 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~- 474 (562)
..+++++...++++|..+|.|++|.|+..||..+|.. +|..++..++..++..+|.|++|.|+|.||+..+.......
T Consensus 114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 192 (321)
T d1ij5a_ 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192 (321)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH-cCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence 4567888999999999999999999999999999955 88889999999999999999999999999975442211000
Q ss_pred --------------------------cccc--------------------------HHHHHHHHHHHHHhcCCCCCccCH
Q 008547 475 --------------------------EHDS--------------------------EKWHLRSQAAFEKFDIDRDGFITP 502 (562)
Q Consensus 475 --------------------------~~~~--------------------------~~~~~~~~~~F~~~D~d~~G~I~~ 502 (562)
.... ......+..+|..+|.|++|+|+.
T Consensus 193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~ 272 (321)
T d1ij5a_ 193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK 272 (321)
T ss_dssp CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence 0000 001123455799999999999999
Q ss_pred HHHHHHhcccC-------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 503 EELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 503 ~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.
T Consensus 273 ~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 273 EEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999986554 589999999999999999999999985
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.6e-16 Score=141.49 Aligned_cols=126 Identities=19% Similarity=0.353 Sum_probs=97.1
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCc-----ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 473 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~ 473 (562)
+.++...+++.|..++ ++||.|+..||..+|.+ +|.. ++.+.+..++..+|.|++|.|+|+||+..+...
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~-~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~--- 76 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 76 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh---
Confidence 4456677889999986 88999999999999965 5543 457889999999999999999999998765422
Q ss_pred cccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 474 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 474 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
.....+|+.||+|++|+|+.+|++.+|...+ ++..+++.+| .+|.|+|+||+.+|.
T Consensus 77 ---------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~ 138 (172)
T d1juoa_ 77 ---------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCV 138 (172)
T ss_dssp ---------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHH
T ss_pred ---------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHH
Confidence 2455689999999999999999999997766 2555555543 345555555555543
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.62 E-value=3.1e-16 Score=127.12 Aligned_cols=95 Identities=27% Similarity=0.434 Sum_probs=77.8
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc---C
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G 513 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~ 513 (562)
.++.+++.+++..++ .+|.|+|+||+..+.. . ... ...++++|+.||+|++|+|+.+||+.+|... +
T Consensus 5 ~l~~~di~~~~~~~~--~~G~idf~eF~~~~~~--~---~~~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g 74 (109)
T d5pala_ 5 VLKADDINKAISAFK--DPGTFDYKRFFHLVGL--K---GKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74 (109)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--T---TCC---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTC
T ss_pred HccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh--c---CCC---HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhcc
Confidence 456788888888876 4578999999976542 1 111 2478899999999999999999999988543 2
Q ss_pred ------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 ------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 ------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+++++|+.+|.|+||.|+|+||+++|.+
T Consensus 75 ~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 75 RDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 3899999999999999999999999975
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.61 E-value=1.5e-15 Score=135.45 Aligned_cols=145 Identities=17% Similarity=0.218 Sum_probs=112.3
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhh---CCCcccHHHH-----------HHHHHhcCCCCCcccchhhHHHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKD---LPWKLKESRV-----------LEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~---~~~~~~~~~~-----------~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
..++|+++|..+|.|++|.|+..||..++.+. .+......++ ..++...+.+++|.|++.++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 45678999999999999999999999998552 3333333332 335566688999999999998766
Q ss_pred hhhhhhccc--ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 468 LHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 468 ~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
......... ........++.+|..||.|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 544332211 1122235688899999999999999999999988766 4899999999999999999999999987
Q ss_pred ccccC
Q 008547 542 ASISS 546 (562)
Q Consensus 542 ~~~~~ 546 (562)
...+.
T Consensus 165 ~~~~~ 169 (176)
T d1nyaa_ 165 FHFGR 169 (176)
T ss_dssp CSSSC
T ss_pred HhcCC
Confidence 65443
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.56 E-value=7e-15 Score=118.65 Aligned_cols=94 Identities=28% Similarity=0.390 Sum_probs=78.3
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 513 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 513 (562)
.++..++..++..++.+ |.|+|.||+..+... . .. ..+++.+|+.||+|++|+|+.+||+.++..++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~ 73 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGLA----S-KS---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 73 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTGG----G-SC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTS
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhcc----c-CC---HHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhccc
Confidence 35678899999988754 569999999765421 1 11 24789999999999999999999999987763
Q ss_pred ------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 514 ------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 514 ------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+++++|+.+|.|+||+|+|+||+.+|+
T Consensus 74 ~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 74 RALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 389999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.53 E-value=8.5e-15 Score=118.81 Aligned_cols=95 Identities=23% Similarity=0.316 Sum_probs=78.2
Q ss_pred cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---
Q 008547 437 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 513 (562)
Q Consensus 437 ~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 513 (562)
.++.+++..++..++. +|.|+|+||+..+.... .. ...++.+|+.||+|++|+|+.+||+.++...+
T Consensus 5 ~~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~~-----~~---~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~ 74 (109)
T d1rwya_ 5 LLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKK-----KS---ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDA 74 (109)
T ss_dssp HSCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGGG-----SC---HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTC
T ss_pred hcCHHHHHHHHHhccc--CCCcCHHHHHHHHcccc-----CC---HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhcccc
Confidence 3567888889888764 57899999988764321 11 24778899999999999999999999986543
Q ss_pred ------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 514 ------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 514 ------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
+++.+|+.+|.|+||+|+|+||+++|..
T Consensus 75 ~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 75 RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 3889999999999999999999999974
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=9.8e-15 Score=118.06 Aligned_cols=97 Identities=21% Similarity=0.308 Sum_probs=79.6
Q ss_pred CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 434 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 434 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
++..++.+++..++..++ .+|.|+|++|+..+... ... ...++.+|+.||+|++|+|+.+||+.++...+
T Consensus 2 ~~d~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~ 71 (108)
T d1rroa_ 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS-----KMS---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ 71 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG-----GSC---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred hhhhCCHHHHHHHHHhcc--cCCCccHHHHHHHHccC-----cCC---HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHH
Confidence 455678899999988876 45679999998654321 111 24788999999999999999999999997653
Q ss_pred ---------CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 514 ---------SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 514 ---------~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+++.+|+.+|.|+||.|+|+||+.+|+
T Consensus 72 ~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 389999999999999999999999986
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.39 E-value=9.9e-13 Score=117.41 Aligned_cols=123 Identities=15% Similarity=0.238 Sum_probs=101.8
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..+..+|..+|.+++|.|+..||..++.. .......|+.+|.+++|.|+.+||..++........ ..
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~-------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~------~e 122 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLS------DQ 122 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCC------HH
T ss_pred HHHHHHhhccccccccchhhhHHHhhhhh-------ccccccccccccccccchhhhHHHHHHHHHcCCcch------hH
Confidence 45566677889999999999999998853 356788999999999999999999888765432211 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc--cHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 539 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~eF~~~l 539 (562)
.+..+++.+|.+++|.|+.+||..++.....+.++|+.+|.++||.| +++||+.+|
T Consensus 123 ~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 123 FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 67789999999999999999999888766668889999999999965 799999876
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=8.4e-13 Score=115.45 Aligned_cols=122 Identities=13% Similarity=0.134 Sum_probs=97.9
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
.++.++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+.+||..++........ ...
T Consensus 41 ~~~~li~~~D~~~~G~i~~~EF~~l~~~-------~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~------~~~ 107 (165)
T d1k94a_ 41 TCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLS------PQT 107 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCC------HHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHhhc-------cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCC------HHH
Confidence 3445566689999999999999988754 367888999999999999999999887765533222 236
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc--cHHHHHHHHHh
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLRT 541 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~eF~~~l~~ 541 (562)
+..+|+.+|+ +|.|+.+||..++.....+.++|+.+|.|++|.| +++||+.++.+
T Consensus 108 ~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~~ 164 (165)
T d1k94a_ 108 LTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMA 164 (165)
T ss_dssp HHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEEHHHHHHHHHT
T ss_pred HHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHHc
Confidence 7778888986 4899999998877766667788999999999976 78999988764
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.38 E-value=8.9e-13 Score=116.85 Aligned_cols=123 Identities=16% Similarity=0.165 Sum_probs=100.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
.....++..+|.+++|.|+..||..++.. ......+|+.+|.+++|.|+..||..++........ .
T Consensus 47 ~~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~-------~ 112 (173)
T d1alva_ 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN-------E 112 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC-------H
T ss_pred HHHHHHHHHhccCCCCcccchhhhhhhhh-------hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhH-------H
Confidence 34556678899999999999999988743 356788999999999999999999987765432211 1
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc--cHHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR 540 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~eF~~~l~ 540 (562)
.....|..+|.|++|.|+.+||..++.....+..+|+.+|.|+||.| +|+||+.+..
T Consensus 113 ~~~~~~~~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~~~D~d~~G~it~~~~efl~~~~ 171 (173)
T d1alva_ 113 HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171 (173)
T ss_dssp HHHHHHHHHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEHHHHHHHHH
T ss_pred HHHHHhhccccCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 34456778888999999999999998877778899999999999987 6999998753
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.37 E-value=7.1e-13 Score=118.94 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=101.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..+..++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+.+|+..++........ .
T Consensus 61 ~~~~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~-------~ 126 (186)
T d1df0a1 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-------C 126 (186)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECC-------H
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHh-------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhccc-------H
Confidence 34566688889999999999999988743 367888999999999999999999988765432222 1
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc--cHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 539 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~eF~~~l 539 (562)
.+.++|..+|.|++|.|+.+||..++.....+..+|+.+|.|++|.| +|.||+.+.
T Consensus 127 ~~~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 127 QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHHHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 34457888999999999999999988877778999999999999986 899999875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.31 E-value=9.6e-13 Score=98.53 Aligned_cols=59 Identities=34% Similarity=0.587 Sum_probs=55.6
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
++++.+|+.||+|++|+|+.+||+.+|..++ +++.+|..+|.|+||+|+|+||+++|.+
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 5788999999999999999999999999888 4999999999999999999999999975
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.31 E-value=5.2e-13 Score=100.87 Aligned_cols=72 Identities=32% Similarity=0.551 Sum_probs=68.1
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
++++++++.+++++|..||.|++|+|+..||..+|.. +|..++..++..++..+|.+++|.|+|+||+.++.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 5789999999999999999999999999999999955 89999999999999999999999999999998764
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.31 E-value=3.7e-12 Score=113.67 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=100.5
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 476 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 476 (562)
.+++.+ +.++|..+|.|++|.|+..||...+.. ...+...|..+|.+++|.|+.+||..++........
T Consensus 50 ~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~-------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls- 118 (182)
T d1y1xa_ 50 PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVS- 118 (182)
T ss_dssp CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCC-
T ss_pred cCchhh---hhhhhcccccccccccccccccccccc-------ccccccchhccccccchhhhhHHHHHHHHHhCCchh-
Confidence 345544 445567788999999999999988743 356778899999999999999999877764322111
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCc--ccHHHHHHH
Q 008547 477 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGR--ISLSEFRRL 538 (562)
Q Consensus 477 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~--i~~~eF~~~ 538 (562)
...+..+|+.+|.|++|.|+.+||.+++.....+.++|+.+|.+++|. ++|+||+..
T Consensus 119 -----~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 119 -----EQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp -----HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred -----HHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 246778999999999999999999998876667888999999999999 478999864
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.31 E-value=7.9e-13 Score=100.69 Aligned_cols=69 Identities=28% Similarity=0.483 Sum_probs=63.2
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+++++.+++++|..||.|++|.|+..||..+|.. +| .++..++..+++.+|.|++|.|+|+||+.++..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~-lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-hh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4789999999999999999999999999999954 78 578999999999999999999999999987653
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.30 E-value=1.3e-12 Score=99.48 Aligned_cols=60 Identities=32% Similarity=0.598 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
++++++|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||+|+|+||+++|++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~ 80 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 80 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence 5788999999999999999999999998887 49999999999999999999999999863
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.30 E-value=1.3e-12 Score=99.55 Aligned_cols=75 Identities=24% Similarity=0.440 Sum_probs=69.0
Q ss_pred hccccchHHhhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
....++++++.+++++|..||.++ +|.|+..||+.+|. .+|..+++.+++.+++.+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~-~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 5 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 345789999999999999999995 89999999999995 4999999999999999999999999999999988763
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.29 E-value=8.1e-13 Score=96.83 Aligned_cols=59 Identities=31% Similarity=0.512 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
++++++|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3678899999999999999999999998886 3899999999999999999999999975
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.28 E-value=1.7e-12 Score=98.88 Aligned_cols=72 Identities=26% Similarity=0.483 Sum_probs=67.4
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
.++++++.+++++|..||.|++|+|+..||..+|. .+|..+++.++..++..+|.|++|.|+|+||+.++..
T Consensus 7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 36899999999999999999999999999999995 5999999999999999999999999999999987753
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.28 E-value=9.3e-13 Score=98.21 Aligned_cols=70 Identities=24% Similarity=0.569 Sum_probs=66.3
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
++++++.+++++|..||.+++|+|+..||..+|.. +|..++++++..+++.+|.+++|.|+|+||+.++.
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 67899999999999999999999999999999955 99999999999999999999999999999998764
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.27 E-value=1.8e-12 Score=97.86 Aligned_cols=62 Identities=32% Similarity=0.462 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.++++++|+.||+|++|+|+.+||+.+|...+ ++..+|+.+|.|++|.|+|+||+++|++.+
T Consensus 8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~ 75 (77)
T d1oqpa_ 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 75 (77)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence 45789999999999999999999999998877 489999999999999999999999998754
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.27 E-value=1.6e-12 Score=94.47 Aligned_cols=57 Identities=37% Similarity=0.654 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
++++.+|+.||+|++|+|+.+||+.++...+ ++..+++.+|.|++|.|+|+||+++|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 4688999999999999999999999999888 48999999999999999999999875
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=4e-12 Score=114.33 Aligned_cols=117 Identities=26% Similarity=0.371 Sum_probs=96.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc------ccccH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHDSE 479 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~------~~~~~ 479 (562)
..++|..+|.+++|.|+..||..++.. +.....++.+..+|+.+|.|++|.|+++||..++....... .....
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~-~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~ 143 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHH-HccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhh
Confidence 356799999999999999999999954 66667789999999999999999999999998876543211 11111
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhc
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 523 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 523 (562)
.....+..+|+.+|.|+||.|+.+||.+++.....+.+.|..+|
T Consensus 144 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~~~d 187 (190)
T d1fpwa_ 144 TPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD 187 (190)
T ss_dssp CHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHHHHHHhhhhc
Confidence 22456888999999999999999999999998888888888776
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=3.6e-13 Score=118.73 Aligned_cols=120 Identities=12% Similarity=0.110 Sum_probs=83.0
Q ss_pred ccCCCCCCCCHHHHHHHHHhhCCC--cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHH
Q 008547 413 IDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 490 (562)
Q Consensus 413 ~D~~~~G~i~~~el~~~l~~~~~~--~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~ 490 (562)
+|.|++|.|+..||..++.. .+. ......+..++...|.+++|.|+|+||...+..+.. + .++..+|.
T Consensus 16 ~d~n~dG~Is~~el~k~l~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~-r--------~ei~~~F~ 85 (170)
T d2zkmx1 16 MQLNSEGKIPVKNFFQMFPA-DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP-R--------PEIDEIFT 85 (170)
T ss_dssp HSCCTTSCEEHHHHHHHSCS-CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-C--------HHHHTTCC
T ss_pred cccCCCCCCcHHHHHHHHHH-hhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC-H--------HHHHHHHH
Confidence 79999999999999988732 221 122334555677778899999999999988765432 1 25778999
Q ss_pred HhcCCCCCccCHHHHHHHhcccC----------------CHHHHHHHhcCCCC----CcccHHHHHHHHHhc
Q 008547 491 KFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADIDKD----GRISLSEFRRLLRTA 542 (562)
Q Consensus 491 ~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~d~d----G~i~~~eF~~~l~~~ 542 (562)
.||.|++|+||.+||..+|.... .+..++..+..+.+ |.|++++|..+|.+.
T Consensus 86 ~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~ 157 (170)
T d2zkmx1 86 SYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP 157 (170)
T ss_dssp --------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred HHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCc
Confidence 99999999999999999996432 47888888877654 889999999999754
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.25 E-value=6.3e-13 Score=102.64 Aligned_cols=73 Identities=33% Similarity=0.682 Sum_probs=68.2
Q ss_pred hhccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHH
Q 008547 393 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466 (562)
Q Consensus 393 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~ 466 (562)
.|+..++++++.+++++|..||.+++|.|+..||..+|.. +|..+++.++..+++.+|.|++|.|+|+||+.+
T Consensus 12 ~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~a 84 (87)
T d1s6ja_ 12 HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHT-TTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHH
Confidence 4667889999999999999999999999999999999955 999999999999999999999999999999854
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.25 E-value=2.9e-12 Score=93.71 Aligned_cols=57 Identities=30% Similarity=0.518 Sum_probs=53.5
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
++++|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 57799999999999999999999998887 4999999999999999999999999975
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.24 E-value=5.6e-12 Score=95.85 Aligned_cols=60 Identities=33% Similarity=0.512 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+++++|+.||+||+|+|+.+||+.+|...| ++.++|..+|.|+||.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35788999999999999999999999999887 4899999999999999999999999975
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.23 E-value=5.9e-12 Score=95.73 Aligned_cols=61 Identities=31% Similarity=0.483 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
...++++|+.||+|++|+|+.+||+.+|..++ ++.++|..+|.|++|.|+|+||+.+|+..
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~ 70 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 70 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence 45788999999999999999999999999887 48999999999999999999999998753
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.22 E-value=8.7e-12 Score=111.35 Aligned_cols=120 Identities=17% Similarity=0.149 Sum_probs=81.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 484 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~ 484 (562)
.++.++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+..||..++........ . ..
T Consensus 64 ~~~~li~~~D~d~~G~i~~~EF~~l~~~-------~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~---~---~~ 130 (188)
T d1qxpa2 64 SCRSMVNLMDRDGNGKLGLVEFNILWNR-------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP---C---QL 130 (188)
T ss_dssp HHHHHHHHHCC--CCCCCSSSHHHHHHH-------HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECC---H---HH
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHhh-------hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCC---H---HH
Confidence 3455567778888888888888877643 256677888888888888888888776654332211 1 23
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcc--cHHHHHHH
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL 538 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~eF~~~ 538 (562)
+..++.. |.|++|.|+.+||..++.....+.++|+.+|.+++|.| +++||+.+
T Consensus 131 ~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 131 HQVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp HHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred HHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 3444555 35788888888887777666566777888888888865 78888765
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.20 E-value=1.3e-11 Score=93.88 Aligned_cols=60 Identities=27% Similarity=0.465 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCC-CCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDR-DGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~-~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
...++++|+.||+|| +|+|+..||+.+|..+| +++++|.++|.|+||.|+|+||+.+|.+
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 467889999999996 79999999999999888 4999999999999999999999999976
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.20 E-value=5.1e-12 Score=90.37 Aligned_cols=54 Identities=28% Similarity=0.470 Sum_probs=50.6
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRR 537 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~ 537 (562)
+++++|+.||+|++|+|+.+||+.+|...+ ++..+|+.+|.|++|.|+|+||++
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 578899999999999999999999999887 499999999999999999999984
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.19 E-value=7.1e-12 Score=94.45 Aligned_cols=60 Identities=32% Similarity=0.481 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+++++|+.||.|++|+|+.+||+.+|...| ++.++|..+|.|++|.|+|+||+.+|.+
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45788999999999999999999999998877 4899999999999999999999999865
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.19 E-value=6.6e-12 Score=93.47 Aligned_cols=60 Identities=32% Similarity=0.488 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+++.+|+.||+|++|+|+.+||+.++...| ++..+++.+|.|++|.|+|+||+.+|.+
T Consensus 7 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 45788999999999999999999999998887 3899999999999999999999999864
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.17 E-value=1.5e-11 Score=92.31 Aligned_cols=60 Identities=30% Similarity=0.511 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCC--CCCccCHHHHHHHhcccC--------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFDID--RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
++++++|+.||.+ ++|+|+.+||+.+|...+ +++++|..+|.|+||.|+|+||+.+|.+.
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 4788999999765 479999999999997543 48999999999999999999999999864
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.16 E-value=5e-11 Score=106.94 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=92.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc--------
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-------- 475 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~-------- 475 (562)
..+..+|..+|.|++|.|+..||..++.. +.....++.+..+|+.+|.|++|.|+++||..++........
T Consensus 58 ~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~-~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~ 136 (189)
T d1jbaa_ 58 QYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA 136 (189)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred HHHHHHHHHhccCCCCeEeehhHHHHHHh-hcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchh
Confidence 44677899999999999999999999965 445566788999999999999999999999877654332110
Q ss_pred ---cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHH
Q 008547 476 ---HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 520 (562)
Q Consensus 476 ---~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 520 (562)
.........+..+|+.+|+|+||.|+.+||.+++.....+.++|.
T Consensus 137 ~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~ 184 (189)
T d1jbaa_ 137 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQ 184 (189)
T ss_dssp STTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHH
T ss_pred hhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhc
Confidence 000111346778999999999999999999999998888887776
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.15 E-value=1.1e-11 Score=89.84 Aligned_cols=62 Identities=35% Similarity=0.610 Sum_probs=58.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 466 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~ 466 (562)
++|+++|..||++++|+|+.+||+.++.. +|..+++.++..+++.+|.|++|.|+|+||+.+
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~-lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~ 64 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 64 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence 46889999999999999999999999955 999999999999999999999999999999864
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.14 E-value=2.6e-12 Score=99.13 Aligned_cols=78 Identities=31% Similarity=0.396 Sum_probs=62.7
Q ss_pred CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCC
Q 008547 454 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKD 527 (562)
Q Consensus 454 ~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~d 527 (562)
.+|.|+.++.. +.. .....+ ...++.+|+.||+|++|+|+.+||+.++...| ++..+|+.+|.|++
T Consensus 2 ~~g~id~~~~~--ma~--~l~~~~----i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~ 73 (87)
T d1s6ja_ 2 SSGHIDDDDKH--MAE--RLSEEE----IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 73 (87)
T ss_dssp CSSSSSSHHHH--SSS--SSCSSS----TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCS
T ss_pred CCCccCchHHH--HHh--hCCHHH----HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCC
Confidence 57889998854 221 111111 23577899999999999999999999999887 49999999999999
Q ss_pred CcccHHHHHHHH
Q 008547 528 GRISLSEFRRLL 539 (562)
Q Consensus 528 G~i~~~eF~~~l 539 (562)
|.|+|+||+.+|
T Consensus 74 g~I~~~EFl~am 85 (87)
T d1s6ja_ 74 GTIDYGEFIAAT 85 (87)
T ss_dssp SEECHHHHTTCC
T ss_pred CeEeHHHHHHHH
Confidence 999999998755
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.13 E-value=1.7e-11 Score=91.58 Aligned_cols=65 Identities=26% Similarity=0.440 Sum_probs=60.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
.++.++|..||.+++|+|+..||+.+|.. +|..++..++..+++.+|.+++|.|+|+||+.++..
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~-lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRA-TGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHH-SSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHh-cCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 46888999999999999999999999955 999999999999999999999999999999987653
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.12 E-value=2.2e-11 Score=88.86 Aligned_cols=64 Identities=20% Similarity=0.447 Sum_probs=59.1
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
.++++|..+|.|++|+|+..||..++. .+|..++.+++..+|..+|.|++|.|+|+||+..+..
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHH-HTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHH-HhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 357899999999999999999999995 4999999999999999999999999999999987653
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.12 E-value=1.5e-11 Score=93.40 Aligned_cols=64 Identities=30% Similarity=0.481 Sum_probs=60.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
.+|+++|..||.+++|+|+..||..+|.. +|..++..++..++..+|.|++|.|+|+||+.++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQA-TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHT-SSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHh-cCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 56889999999999999999999999954 99999999999999999999999999999998764
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.11 E-value=1.9e-11 Score=87.34 Aligned_cols=61 Identities=26% Similarity=0.579 Sum_probs=57.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 465 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~ 465 (562)
++++++|..||++++|+|+..||+.+|.. +|..+++.++..+++.+|.|++|.|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~-~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTG-LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHH-TTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHH-cCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 36788999999999999999999999955 99999999999999999999999999999973
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.10 E-value=1.4e-10 Score=97.54 Aligned_cols=94 Identities=23% Similarity=0.370 Sum_probs=78.9
Q ss_pred HHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---------
Q 008547 443 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------- 513 (562)
Q Consensus 443 ~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------- 513 (562)
.+.+|+.+|.|++|.|+++||..++..+..... ...+..+|..+|.+++|.|+.+||..++....
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~------~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~ 75 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN------EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSH------HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 468999999999999999999887765432211 34678899999999999999999999886543
Q ss_pred CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 514 SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 514 ~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.+..+|+.+|.|++|.|+.+||..++...
T Consensus 76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~ 104 (134)
T d1jfja_ 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred cccccccccccccCCcccHHHHHHHHHhc
Confidence 26789999999999999999999998754
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.10 E-value=2.5e-11 Score=91.32 Aligned_cols=68 Identities=24% Similarity=0.425 Sum_probs=62.2
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+..++++++|..||.|++|+|+..||..+|.. ++..++..++..+++.+|.|++|.|+|+||+.++..
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKE-LGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 44567999999999999999999999999955 999999999999999999999999999999987653
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1e-10 Score=103.74 Aligned_cols=115 Identities=14% Similarity=0.137 Sum_probs=89.5
Q ss_pred hccccccccCC-CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc---ccccHHH
Q 008547 406 LRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---EHDSEKW 481 (562)
Q Consensus 406 l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~---~~~~~~~ 481 (562)
..++|+.||.+ ++|.|+..||..++.........++.+..+|+.+|.|++|.|+.+|+..++..+.... .......
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 35678889987 6999999999999965455666678899999999999999999999998776543211 1112223
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHH
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 520 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 520 (562)
...+..+|+.+|.|+||.|+.+||.+++....++.+.|.
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P~~~~~f~ 177 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFK 177 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCHHHHhhCe
Confidence 455778999999999999999999999987766655554
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.08 E-value=8.4e-11 Score=106.55 Aligned_cols=119 Identities=19% Similarity=0.247 Sum_probs=94.8
Q ss_pred CCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhc-CCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC
Q 008547 417 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 495 (562)
Q Consensus 417 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 495 (562)
+.|.|+.+++..+. + -...+..++..+++.| +.+++|.|+++||..++......... ...+..+|..+|.|
T Consensus 4 ~~~~l~~e~l~~l~-~--~t~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~-----~~~~~~if~~~D~~ 75 (201)
T d1omra_ 4 KSGALSKEILEELQ-L--NTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADP-----KAYAQHVFRSFDAN 75 (201)
T ss_dssp SSCTHHHHHHHHHG-G--GCSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCC-----HHHHHHHHHTTTSC
T ss_pred ccCCCCHHHHHHHH-H--hCCCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCH-----HHHHHHHHHHhccC
Confidence 46789989998776 3 3446789999999886 66789999999999887654332221 23567799999999
Q ss_pred CCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 496 RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 496 ~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
++|.|+..||...+.... .+..+|+.+|.|++|.|+++||..+++...
T Consensus 76 ~~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~ 129 (201)
T d1omra_ 76 SDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129 (201)
T ss_dssp SSSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred CCCeEeehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHH
Confidence 999999999988774332 489999999999999999999999987643
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=2.8e-11 Score=108.41 Aligned_cols=116 Identities=22% Similarity=0.257 Sum_probs=90.6
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhc------ccccHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHDSEK 480 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~------~~~~~~ 480 (562)
..+|..+|.+++|.|+..||..++.. +.....++.+..+|+.+|.|++|.|+.+|+..++....... ......
T Consensus 63 ~~if~~~d~~~dg~I~~~EF~~~l~~-~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~ 141 (187)
T d1g8ia_ 63 TFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 141 (187)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred HHHHHHhCcCCCCCCcHHHHHHHHHH-hccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence 45789999999999999999999855 43445577899999999999999999999987775432211 111111
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhc
Q 008547 481 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 523 (562)
Q Consensus 481 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 523 (562)
....+..+|+.+|.|+||+|+.+||.+++.....+.++|..+|
T Consensus 142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~~~l~~~~ 184 (187)
T d1g8ia_ 142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 184 (187)
T ss_dssp HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCCBT
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHHHHhh
Confidence 2356788999999999999999999999988777777766554
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.06 E-value=2e-11 Score=89.19 Aligned_cols=64 Identities=20% Similarity=0.443 Sum_probs=58.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCc-ccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
+++.++|..||.+++|+|+..||..+|. .+|.. .+.++++.+++.+|.|++|.|+|+||+.++.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQ-KVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSS-TTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHH-HhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4688999999999999999999999994 47775 6999999999999999999999999997764
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.05 E-value=4e-10 Score=90.47 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=69.3
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC
Q 008547 416 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 495 (562)
Q Consensus 416 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 495 (562)
+++|.|+..||..++. + ...+.+++..+|+.+|.|++|.|+.+|+..++..+.......+ ..++..+|+.+|.|
T Consensus 19 d~dG~idf~EF~~~~~--~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls---~~ev~~~~~~~D~d 92 (109)
T d1pvaa_ 19 KAEGSFNHKKFFALVG--L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAETKAFLKAADKD 92 (109)
T ss_dssp CSTTCCCHHHHHHHHT--C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHHHHHHHHHHCTT
T ss_pred CCCCCCcHHHHHHHHH--H-ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHCCC
Confidence 4678999999988772 2 2345688999999999999999999999866654322111111 24678899999999
Q ss_pred CCCccCHHHHHHHhcc
Q 008547 496 RDGFITPEELRMHTGL 511 (562)
Q Consensus 496 ~~G~I~~~El~~~l~~ 511 (562)
+||.|+.+||..++..
T Consensus 93 ~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 93 GDGKIGIDEFETLVHE 108 (109)
T ss_dssp CSSSBCHHHHHHHHHC
T ss_pred CcCcEeHHHHHHHHHh
Confidence 9999999999998753
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.04 E-value=9.8e-11 Score=103.86 Aligned_cols=116 Identities=20% Similarity=0.268 Sum_probs=89.0
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc------ccH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DSE 479 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~------~~~ 479 (562)
+..+|..+|.+++|.|+.+||..++.. +.....++.+..+|+.+|.+++|.|+++|+...+......... ...
T Consensus 53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~-~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~ 131 (178)
T d1s6ca_ 53 AHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 131 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC----------
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHH-HhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHH
Confidence 356788999999999999999998844 4445567889999999999999999999998776543322110 001
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHh
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA 522 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~ 522 (562)
.....+..+|+.+|.|+||.||.+||.+++....++-+++..+
T Consensus 132 ~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~~~~~l~~~ 174 (178)
T d1s6ca_ 132 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLF 174 (178)
T ss_dssp -CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHhhhh
Confidence 1124567899999999999999999999998887776666544
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.04 E-value=1.7e-10 Score=102.69 Aligned_cols=109 Identities=22% Similarity=0.218 Sum_probs=86.0
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc--cccHHHHH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE--HDSEKWHL 483 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~--~~~~~~~~ 483 (562)
...+|..+|.+++|.|+..||..++.........++.+..+|+.+|.|++|.|+.+|+..++........ ........
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 4577999999999999999999998553444556778999999999999999999999887664432211 12223345
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccCC
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS 514 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~ 514 (562)
.+..+|+.+|.|+||.|+.+||..++.....
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 166 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHCHH
Confidence 6788999999999999999999998875543
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=98.99 E-value=1.1e-09 Score=87.92 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=71.5
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++.+++.++ +..+| .+|.|+..||..++. + ...+++++..+|+.+|.|++|.|+.+|+..++..........
T Consensus 6 l~~~di~~~---~~~~~--~~G~idf~eF~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~ 77 (109)
T d5pala_ 6 LKADDINKA---ISAFK--DPGTFDYKRFFHLVG--L-KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp SCHHHHHHH---HHHTC--STTCCCHHHHHHHHT--C-TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred ccHHHHHHH---HHhcC--CCCcCcHHHHHHHHH--h-cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcC
Confidence 344454443 33343 468899999987662 2 233567899999999999999999999887665432221111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
. ..++.++|+.+|.|+||.|+.+||..++.
T Consensus 78 ~---~~e~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 78 N---DTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred C---HHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 1 24678889999999999999999988775
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.98 E-value=1.8e-10 Score=89.26 Aligned_cols=60 Identities=25% Similarity=0.458 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
+.+..+|..||.| +|+|+.+||+.++.... .++++|+.+|.|+||+|+|+||..+|.+..
T Consensus 9 e~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 79 (92)
T d1a4pa_ 9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (92)
T ss_dssp HHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 5688899999987 89999999999986422 389999999999999999999999987643
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.2e-10 Score=92.16 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=50.4
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHhcccC----------------------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 485 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 485 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
++.+|+.||.||||+|+.+||+.++.... .++.+|..+|.|+||.|||+||++++++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 56689999999999999999999885321 16789999999999999999999998753
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.97 E-value=2.1e-10 Score=86.02 Aligned_cols=60 Identities=27% Similarity=0.464 Sum_probs=52.1
Q ss_pred HHHHHHHHHhcC-C-CCCccCHHHHHHHhcccC--------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFDI-D-RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D~-d-~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
..++.+|..||. + ++|+|+.+||+.++.... +++++|..+|.|+||.|+|+||+.+|.+.
T Consensus 7 ~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 578899999975 3 459999999999996542 48999999999999999999999999864
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.96 E-value=6.8e-10 Score=87.01 Aligned_cols=61 Identities=16% Similarity=0.302 Sum_probs=52.5
Q ss_pred HHHHHHHHHh-cCCCC-CccCHHHHHHHhcccC--------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..| |+||+ |+|+.+||+.++...+ .++++|..+|.|+||.|+|+||+.+|.+..
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~ 84 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA 84 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 4677889887 78885 9999999999996432 499999999999999999999999997643
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.95 E-value=2.2e-10 Score=89.33 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=52.7
Q ss_pred HHHHHHHHHh-cCCCC-CccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+.++|..| |+||+ |+|+.+||+++|.... .+.++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~ 82 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4788899888 89985 9999999999996543 388999999999999999999999997643
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=98.95 E-value=1.3e-09 Score=87.55 Aligned_cols=103 Identities=18% Similarity=0.195 Sum_probs=75.4
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++.+++.++...| +.+|.|+..||..++. + ...+.+++..+|+.+|.|++|.|+++||..++..+.......
T Consensus 6 ~~~~~i~~~~~~~-----~~~~~i~f~eF~~~~~--~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~ 77 (109)
T d1rwya_ 6 LSAEDIKKAIGAF-----TAADSFDHKKFFQMVG--L-KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp SCHHHHHHHHHTT-----CSTTCCCHHHHHHHHT--G-GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred cCHHHHHHHHHhc-----ccCCCcCHHHHHHHHc--c-ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccC
Confidence 4555555555444 3357899999988772 2 223567888999999999999999999988776543322111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
. ..++..+|+.+|.|+||.|+.+||.+++..
T Consensus 78 ~---~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 78 S---AKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred C---HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 1 246778999999999999999999988753
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.93 E-value=6.1e-10 Score=98.88 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=86.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc------cccH
Q 008547 406 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDSE 479 (562)
Q Consensus 406 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~------~~~~ 479 (562)
..++|..+|.+++|.|+.+||..++.. +-.....+.+..+|+.+|.|++|.|+.+||...+........ ....
T Consensus 61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~-~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~ 139 (181)
T d1bjfa_ 61 AEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 139 (181)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGS
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHHHH-HhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccc
Confidence 466789999999999999999999855 444556788999999999999999999999988775433211 0111
Q ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHH
Q 008547 480 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID 516 (562)
Q Consensus 480 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~ 516 (562)
.....+..+|+.+|.|+||.|+.+||.+++....++-
T Consensus 140 ~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~ 176 (181)
T d1bjfa_ 140 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIV 176 (181)
T ss_dssp SHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHH
T ss_pred cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHH
Confidence 1234678899999999999999999999887655433
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=8.3e-10 Score=97.09 Aligned_cols=58 Identities=26% Similarity=0.579 Sum_probs=29.6
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
...|+.+|.+++|.|+.+|+..+|.. +|...+.+++..+++.+| .+|.|+|++|+..+
T Consensus 80 ~~~f~~~D~d~sG~i~~~El~~~l~~-~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~ 137 (172)
T d1juoa_ 80 RQHFISFDTDRSGTVDPQELQKALTT-MGFRLSPQAVNSIAKRYS--TNGKITFDDYIACC 137 (172)
T ss_dssp HHHHHTTCTTCCSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHH
T ss_pred hHHHHHhCcCCCCcCCHHHHHHHHHH-HHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHH
Confidence 33455555555555555555555533 455555555555555554 23445555555443
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=4.5e-10 Score=87.85 Aligned_cols=58 Identities=24% Similarity=0.312 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
..++++|+.+|+|++|+|+.+|++.++...+ ++..++..+|.|+||.|+|+||+.+|.
T Consensus 10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 4678899999999999999999999998877 489999999999999999999987664
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=6.7e-10 Score=84.67 Aligned_cols=57 Identities=25% Similarity=0.394 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CHHHHHHHhcCCCCCcccHHHHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 539 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~eF~~~l 539 (562)
..+.++|+.||.+++|+|+.+||+.+|...+ ++..+|..+|.|++|.|+|.||+..+
T Consensus 20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 20 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4688899999999999999999999998776 48999999999999999999999875
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.91 E-value=4.6e-10 Score=86.76 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=53.5
Q ss_pred HHHHHHHHHh-cCCCCC-ccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 483 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
..+..+|..| |+||+| +|+.+||+++|.... .++++|+.+|.|+||.|+|+||+.+|.+..+
T Consensus 9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~~ 83 (93)
T d1ksoa_ 9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCL 83 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHH
Confidence 4677889887 999999 599999999986432 3899999999999999999999999987653
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.89 E-value=1.1e-09 Score=84.96 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=52.0
Q ss_pred HHHHHHHHHh-cCCCCC-ccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+.++|..| |+||+| +|+.+||+++|.... +++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~ 82 (93)
T d3c1va1 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 82 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence 4678899998 677765 799999999996532 388999999999999999999999998754
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.89 E-value=1.3e-09 Score=83.12 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=52.6
Q ss_pred HHHHHHHHHh-cCCCCCcc-CHHHHHHHhcc-cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRDGFI-TPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~G~I-~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..| |+||+|.+ +.+||+.++.. .+ .++++|+++|.|+||.|+|+||+.+|.+..
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~la 79 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMG 79 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 4567788887 99999965 99999999864 34 599999999999999999999999998754
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=98.89 E-value=9.8e-10 Score=93.75 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=80.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 483 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~ 483 (562)
..+..+|..+|.+++|.|+..||..++...+......+.+..+|+.+|.|++|.|+..||...+........ ..
T Consensus 45 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~ 118 (146)
T d1exra_ 45 AELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT------DD 118 (146)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCC------HH
T ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCC------HH
Confidence 445666788899999999999999988553333334678889999999999999999999887765432222 24
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
.+..+|+.+|.|++|.|+.+||.++|.
T Consensus 119 ~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 119 EVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 778899999999999999999998764
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.89 E-value=2.5e-09 Score=85.59 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=73.4
Q ss_pred cccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc
Q 008547 396 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 475 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 475 (562)
..++.+++..+.+. .+.+|.++..+|...+ . + ...+.++++.+|+.+|.|++|.|+++||..++..+.....
T Consensus 4 d~ls~~dI~~~l~~-----~~~~~s~~~~~F~~~~-~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (108)
T d1rroa_ 4 DILSAEDIAAALQE-----CQDPDTFEPQKFFQTS-G-L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GTSCHHHHHHHHHH-----TCSTTCCCHHHHHHHH-S-G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred hhCCHHHHHHHHHh-----cccCCCccHHHHHHHH-c-c-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccC
Confidence 34556665554433 3456789999987655 1 2 2345678889999999999999999999877655432211
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 476 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 476 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
..+ ..++..+|+.+|.|+||.|+.+||..++.
T Consensus 76 ~l~---~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 76 ELT---ESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCC---HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 111 24678889999999999999999998875
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=6.2e-10 Score=87.03 Aligned_cols=69 Identities=23% Similarity=0.223 Sum_probs=61.7
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+++++..++.++|..+|+|++|+|+.+|+..++.+ .+ ++.+++..+++.+|.|++|.|+|+||+.++..
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-cC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 57888999999999999999999999999999954 44 57889999999999999999999999876643
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.88 E-value=7.7e-10 Score=85.97 Aligned_cols=59 Identities=24% Similarity=0.350 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..++++|+.+|+|++|+|+.+|++.++...+ ++..++..+|.|+||.|+|+||+.+|.-
T Consensus 9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 4678899999999999999999999998776 4899999999999999999999865543
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=7.2e-10 Score=84.52 Aligned_cols=65 Identities=18% Similarity=0.347 Sum_probs=60.0
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHH
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 467 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~ 467 (562)
....+.++|..+|.+++|.|+..||+.+|.. ++..++++++..++..+|.+++|.|+|.||+..+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~-~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHH-hCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4567889999999999999999999999965 8999999999999999999999999999998654
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=2.4e-09 Score=93.40 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=83.5
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHH
Q 008547 407 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 486 (562)
Q Consensus 407 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~ 486 (562)
.++|..+|.+++|.|+..||..++............+..+|+.+|.|++|.|+.+|+...+...... ..........+.
T Consensus 51 ~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~-~~~~~~~~~~~~ 129 (165)
T d1auib_ 51 QRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVD 129 (165)
T ss_dssp HHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTT-SSCHHHHHHHHH
T ss_pred HHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccc-cCchHHHHHHHH
Confidence 4568889999999999999999986544455566779999999999999999999999877543221 112222345678
Q ss_pred HHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 487 AAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 487 ~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
.+|..+|.|++|.|+.+||.+++...
T Consensus 130 ~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 130 KTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp HHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred HHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 89999999999999999999988744
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.85 E-value=3.8e-09 Score=89.86 Aligned_cols=99 Identities=16% Similarity=0.077 Sum_probs=78.6
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC--CCCccCHHHHHHHhcccC----
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID--RDGFITPEELRMHTGLKG---- 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~---- 513 (562)
.++++++|..+|.|++|.|+++||..++..+..... ..++..++..+|.+ ++|.|+.+||..++....
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~------~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 76 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT------NAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD 76 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcch------hhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc
Confidence 478899999999999999999999987765432222 23556677766655 689999999998875432
Q ss_pred -----CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 514 -----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 514 -----~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
++..+|+.+|.|++|.|+.+||..+|...+.
T Consensus 77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 112 (145)
T d2mysc_ 77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE 112 (145)
T ss_pred cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCC
Confidence 3778999999999999999999999987543
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.84 E-value=1.1e-09 Score=85.07 Aligned_cols=69 Identities=28% Similarity=0.328 Sum_probs=61.9
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
+++++...+.++|..+|.|++|+|+.+|+..++.+ .+ ++..++..+++.+|.|++|.|+|+||+.++..
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHH-cc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 57889999999999999999999999999999966 44 56789999999999999999999999865543
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.82 E-value=3.1e-09 Score=83.52 Aligned_cols=57 Identities=19% Similarity=0.255 Sum_probs=52.5
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
...++|+.+|+|++|+|+.+|+++++...+ ++..++..+|.|+||.|+++||+.+|+
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 456789999999999999999999998877 589999999999999999999998886
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=7.2e-09 Score=87.54 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=82.1
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 513 (562)
..++.++|..+|.+++|.|++.||..++........ ...+...|..+|.+++|.|+.+||...+....
T Consensus 5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 78 (141)
T d2obha1 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK------KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK 78 (141)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchh------HHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccH
Confidence 357889999999999999999999987665432222 24677889999999999999999988875443
Q ss_pred -CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 514 -SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 514 -~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
++..+|..+|.+++|.|+..||..++...+.
T Consensus 79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~ 110 (141)
T d2obha1 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGE 110 (141)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccCCCCccHHHHHHHHHHhCC
Confidence 3788999999999999999999999987653
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.80 E-value=9.5e-09 Score=81.93 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=69.8
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccc
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 477 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 477 (562)
++.+++..+ +...+ .+|.|+..||..++ . +. ..+.+++..+|+.+|.+++|.|+.+||..++..+.......
T Consensus 5 ls~~di~~~---~~~~~--~~gsi~~~eF~~~~-~-l~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~ 76 (107)
T d2pvba_ 5 LKDADVAAA---LAACS--AADSFKHKEFFAKV-G-LA-SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARAL 76 (107)
T ss_dssp SCHHHHHHH---HHHTC--STTCCCHHHHHHHH-T-GG-GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCC
T ss_pred CCHHHHHHH---HHhcc--CCCCcCHHHHHHHH-h-cc-cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccC
Confidence 445554433 44443 45679998888776 2 21 23567788899999999999999999987665443211111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 478 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 478 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
. ...++++|+.+|.|+||.|+.+||..+++
T Consensus 77 ~---~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 77 T---DAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp C---HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred C---HHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 1 24677889999999999999999988764
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.79 E-value=2.6e-09 Score=84.07 Aligned_cols=60 Identities=25% Similarity=0.323 Sum_probs=50.6
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..|| +++|.|+.+||+.++.... .++++|..+|.|+||.|+|+||+.+|.+..
T Consensus 10 ~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 82 (100)
T d1psra_ 10 IGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIA 82 (100)
T ss_dssp HHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 35566777776 7899999999999997532 389999999999999999999999998754
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=5.1e-09 Score=81.52 Aligned_cols=58 Identities=21% Similarity=0.346 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
....+++|+.+| |++|+|+.+|++.++...+ ++..++..+|.|+||.|+|+||+.+|.
T Consensus 9 ~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 9 KAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 356888999999 8999999999999999887 489999999999999999999976554
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.77 E-value=8.7e-10 Score=82.35 Aligned_cols=66 Identities=26% Similarity=0.432 Sum_probs=54.3
Q ss_pred hhhccccccccCC--CCCCCCHHHHHHHHHhhCCCccc--HHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 404 ADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 404 ~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~--~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
++++++|..||.+ ++|+|+.+||+.+|.. +|..++ ..++..+++.+|.|++|.|+|+||+.++...
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~-lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQT-LGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHH-HGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHH-hCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 4678888888654 4799999999999965 665554 4579999999999999999999999877543
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.76 E-value=1.9e-09 Score=82.46 Aligned_cols=61 Identities=25% Similarity=0.374 Sum_probs=52.7
Q ss_pred HHHHHHHHHh-cCCCCC-ccCHHHHHHHhccc---C------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLK---G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~---~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..| |+||+| .|+..||+.++... + +++++|+++|.|+||.|+|+||+.+|.+..
T Consensus 9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la 80 (89)
T d1k8ua_ 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA 80 (89)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 4677789888 999999 69999999998642 2 389999999999999999999999998754
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=4.6e-09 Score=84.11 Aligned_cols=58 Identities=21% Similarity=0.259 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC----CHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
..++++|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+++||+.+|+
T Consensus 22 ~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 4678899999999999999999999998766 599999999999999999999996664
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.72 E-value=5.7e-09 Score=81.04 Aligned_cols=71 Identities=27% Similarity=0.406 Sum_probs=59.6
Q ss_pred hHHhhhhccccccc-cCCCC-CCCCHHHHHHHHHhhC----CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+.++|..+ |.|++ |+|+.+||+.+|.... ....+.+.+..+++.+|.|+||.|+|+||+.++..+
T Consensus 5 E~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34567899999987 88875 9999999999997643 245678999999999999999999999999877644
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.72 E-value=1.7e-08 Score=87.37 Aligned_cols=96 Identities=20% Similarity=0.210 Sum_probs=77.2
Q ss_pred HHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC--------
Q 008547 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------- 513 (562)
Q Consensus 442 ~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------- 513 (562)
++.++|..+|.+++|.|+++||..++........ ...+..+|..+|.+++|.++..|+...+....
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 94 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT------KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKS 94 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchh------HHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCc
Confidence 5678899999999999999999876664433222 24677899999999999999999866543221
Q ss_pred --CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 514 --SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 514 --~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.+..+|+.+|.|++|.|+.+||..+|....
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~ 126 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhC
Confidence 367789999999999999999999998653
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=5e-09 Score=81.57 Aligned_cols=69 Identities=25% Similarity=0.364 Sum_probs=60.5
Q ss_pred cchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 398 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 398 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+++++..++.++|..+| +++|+|+..|++.+|.+ .| ++.+++..+++.+|.|++|.|+++||+.++..+
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~-~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~Li 72 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 72 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTT-SS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 57889999999999999 89999999999999943 44 567899999999999999999999997655433
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.71 E-value=6.4e-09 Score=62.00 Aligned_cols=31 Identities=35% Similarity=0.508 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcccC
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG 513 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 513 (562)
++++++|+.||+||||+|+..||+.+|..+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4788999999999999999999999998765
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.71 E-value=2.4e-08 Score=84.79 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=78.5
Q ss_pred HHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------CH
Q 008547 443 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SI 515 (562)
Q Consensus 443 ~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~ 515 (562)
+..+|..+|.|++|.|+++||..++........ ...+..++..++.++.+.++.+++..++.... ++
T Consensus 12 l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (146)
T d1lkja_ 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPS------EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQEL 85 (146)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCC------HHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCC------HHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHH
Confidence 456799999999999999999987765433222 24677789999999999999999988775433 37
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 516 DPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 516 ~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
..+|+.+|.|++|.|+.+||..++...+.
T Consensus 86 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 114 (146)
T d1lkja_ 86 LEAFKVFDKNGDGLISAAELKHVLTSIGE 114 (146)
T ss_dssp HHHHHHHCSSSSCEEEHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence 78999999999999999999999987653
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.70 E-value=3.6e-09 Score=80.63 Aligned_cols=71 Identities=20% Similarity=0.393 Sum_probs=61.9
Q ss_pred hHHhhhhccccccc-cCCCCCC-CCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+.++|..+ |.+++|. ++.+||+.++...+|...++..++.+++.+|.|+||.|+|+||+..+...
T Consensus 6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 44567888899888 8999986 59999999997778888888899999999999999999999999877643
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.69 E-value=5.5e-09 Score=81.69 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=58.7
Q ss_pred HHhhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCC-CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
..+..+.++|..| |.+++ |+|+..||+.+|....+ ...+...++.++..+|.|+||.|+|+||+..+..+
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 5577899999987 77875 99999999999976544 33455679999999999999999999999887654
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.69 E-value=2.4e-09 Score=82.70 Aligned_cols=70 Identities=20% Similarity=0.340 Sum_probs=58.6
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhC----CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+..+|..+|.| +|.|+.+||..+|.... +...+...++.+++.+|.|+||.|+|+||+..+..+
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 45678899999999987 89999999999996532 233456789999999999999999999999877654
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.67 E-value=6.6e-08 Score=81.62 Aligned_cols=90 Identities=7% Similarity=0.052 Sum_probs=62.9
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCC
Q 008547 416 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 495 (562)
Q Consensus 416 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 495 (562)
+++|.|+..||..++...+....+.+.+...|+.+|.+++|.|+.+||..++..+..... ..++.++|+.+|.|
T Consensus 51 ~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt------~~e~~~l~~~~d~~ 124 (142)
T d1wdcb_ 51 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN------KDEMRMTFKEAPVE 124 (142)
T ss_dssp TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCC------HHHHHHHHHHCCEE
T ss_pred hccCccccccccccccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCC------HHHHHHHHHHhCCC
Confidence 567788888888777655665566777788888888888888888888776654422111 23566778888877
Q ss_pred CCCccCHHHHHHHhccc
Q 008547 496 RDGFITPEELRMHTGLK 512 (562)
Q Consensus 496 ~~G~I~~~El~~~l~~~ 512 (562)
+|.|+.+||..+++..
T Consensus 125 -~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 125 -GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp -TTEECHHHHHHHHHTS
T ss_pred -CCEEcHHHHHHHHhcC
Confidence 4888888888777644
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.66 E-value=2.4e-08 Score=88.35 Aligned_cols=97 Identities=21% Similarity=0.260 Sum_probs=80.5
Q ss_pred HHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC------CH
Q 008547 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SI 515 (562)
Q Consensus 442 ~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~ 515 (562)
++.++|..+|.|++|.|+++||..++........ ...+..+|..+|.+++|.|+.+++..+..... ++
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l 84 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELM------ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENL 84 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCC------HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCST
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccc------cccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHH
Confidence 4678999999999999999999988765432211 24678899999999999999999988765443 48
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 516 DPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 516 ~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
..+|..+|.+++|.|+.+||.++++....
T Consensus 85 ~~aF~~~D~d~~G~i~~~el~~~l~~~gl 113 (182)
T d1s6ia_ 85 VSAFSYFDKDGSGYITLDEIQQACKDFGL 113 (182)
T ss_dssp HHHHHHTTTTCSSEEEHHHHHHTTTTTTC
T ss_pred HHHHHHHhhcCCCccchhhhhhhhhhcCc
Confidence 88999999999999999999998876543
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.65 E-value=1.5e-08 Score=76.77 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=50.7
Q ss_pred HHHHHHHHHh-cCCCCC-ccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..| +++|++ +|+.+||++++.... .++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l~ 81 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIAL 81 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence 4677889888 566665 699999999996421 399999999999999999999999998753
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.65 E-value=1.5e-09 Score=81.27 Aligned_cols=71 Identities=23% Similarity=0.395 Sum_probs=58.2
Q ss_pred hHHhhhhccccccccC-C-CCCCCCHHHHHHHHHhhC-CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAIDV-D-KNGSISLEEMRQALAKDL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~-~-~~G~i~~~el~~~l~~~~-~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+....+|..+|..||. + +.|+|+..||+.+|...+ +...+..+++.++..+|.|+||.|+|+||+..+..+
T Consensus 3 e~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp SCCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3456789999999975 3 458999999999997644 355566779999999999999999999999877643
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.63 E-value=1.6e-08 Score=78.07 Aligned_cols=71 Identities=18% Similarity=0.371 Sum_probs=59.1
Q ss_pred hHHhhhhccccccc-cCCCCC-CCCHHHHHHHHHhh----CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
++.+..+.++|..| |.|++| +|+.+||+++|... ++...++++++.+++.+|.|+||.|+|+||+..+..+
T Consensus 5 E~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 34577899999998 667665 69999999999653 3566788999999999999999999999999876543
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.63 E-value=7.3e-08 Score=84.33 Aligned_cols=105 Identities=11% Similarity=0.143 Sum_probs=77.1
Q ss_pred HHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhccc---ccHHHHHHHHHHHHH--hcCCCCCccCHHHHHHHhcccC-
Q 008547 440 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH---DSEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGLKG- 513 (562)
Q Consensus 440 ~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~---~~~~~~~~~~~~F~~--~D~d~~G~I~~~El~~~l~~~~- 513 (562)
..+++.+|+.+|.|++|.|+++||..++......... ............|.. .|.+++|.|+.+|+...+....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 4678899999999999999999998877654332211 111122233344443 3778899999999988775432
Q ss_pred ----------CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 514 ----------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 514 ----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
.+..+|..+|.|+||.|+.+||..+++....
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 125 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL 125 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh
Confidence 2677999999999999999999999876543
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.63 E-value=1.1e-08 Score=78.75 Aligned_cols=71 Identities=23% Similarity=0.390 Sum_probs=60.2
Q ss_pred hHHhhhhccccccc-cCCCCC-CCCHHHHHHHHHhhC----CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+..+|..+ |.+++| .|+..||+.+|...+ +.......+..+++.+|.|+||.|+|+||+..+..+
T Consensus 5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 45678889999987 999999 599999999997643 344568899999999999999999999999877654
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.59 E-value=6.5e-08 Score=85.51 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=78.2
Q ss_pred HHHHHHHHHh-cCCCCCcccchhhHHHHHhhhhhhcccc--c-------HHHHHHHHHHHHHhcCCCCCccCHHHHHHHh
Q 008547 440 ESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEHD--S-------EKWHLRSQAAFEKFDIDRDGFITPEELRMHT 509 (562)
Q Consensus 440 ~~~~~~l~~~-~d~~~~g~I~~~ef~~~~~~~~~~~~~~--~-------~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 509 (562)
..++..+|.. +|.|++|.|+++||..++..+....... . .........++...|.+++|.|+.+++..++
T Consensus 7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~ 86 (185)
T d2sasa_ 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence 4568889997 5999999999999988776543221100 0 0111233456788999999999999998776
Q ss_pred cccC---------------CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 510 GLKG---------------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 510 ~~~~---------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
.... .+..+|..+|.|++|.|+.+||..++....+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l 136 (185)
T d2sasa_ 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL 136 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC
Confidence 4221 1788999999999999999999999986544
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.58 E-value=2e-08 Score=85.23 Aligned_cols=67 Identities=18% Similarity=0.243 Sum_probs=60.9
Q ss_pred HhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhh
Q 008547 402 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 469 (562)
Q Consensus 402 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~ 469 (562)
....+.++|..||.+++|+|+..||+.+|.. +|..++.+++..+++.+|.|++|.|+|.+|+.++..
T Consensus 75 ~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~-~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 75 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTT-GGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred hHHHHHHHHHhhhhcccchhhHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 3456888999999999999999999999954 899999999999999999999999999999987753
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.58 E-value=4.9e-08 Score=82.22 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=75.2
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC-------
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------- 513 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------- 513 (562)
.+.++.|..+|.+++|.|+++||..++..+..... . .+ +..+|.+++|.|+.+||..++....
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t---~---~e----i~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~ 74 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPT---L---AE----ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGD 74 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCC---H---HH----HHHHHTTSCSSEEHHHHHHHHCTTSSSSSSCC
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhH---H---Hh----hhhhhccccccccchhhhhhhhhhhhcchhhH
Confidence 45678999999999999999999887765432222 1 12 4556889999999999999886432
Q ss_pred --CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 514 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 514 --~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
++.++|+.+|.|++|.|+.+||..+|...+.
T Consensus 75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 107 (140)
T d1ggwa_ 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE 107 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhccCCCcchHHHHHHHHHHcCC
Confidence 2778899999999999999999999987653
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=4.9e-09 Score=83.96 Aligned_cols=71 Identities=24% Similarity=0.298 Sum_probs=61.5
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.+++++...+.++|..+|+|++|+|+.+|++.+|.+ . .++.+++..+++.+|.|++|.|+++||+.++..+
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~-s--~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li 85 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-S--KLSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-S--SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHh-h--ccchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence 357888999999999999999999999999999833 3 4566789999999999999999999998766543
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.55 E-value=1.8e-08 Score=85.61 Aligned_cols=65 Identities=26% Similarity=0.556 Sum_probs=59.9
Q ss_pred hhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 403 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 403 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
.+.+.++|..+|.+++|.|+.+||..+|.. +|..++++++..++..+|.|++|.|+|+||+..+.
T Consensus 80 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~ 144 (146)
T d1m45a_ 80 TEDFVKAFQVFDKESTGKVSVGDLRYMLTG-LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 144 (146)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHH-STTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccccchhhhhhhhcc-cCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 356888899999999999999999999965 89999999999999999999999999999987664
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.55 E-value=1.7e-07 Score=87.74 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=63.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEEEEE
Q 008547 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (562)
Q Consensus 97 ~y~i~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 176 (562)
.|++.+..+.++.+.||++. ..+..+++|........ ....+.+|..+++.|..+--+++++.++..++..++||
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~ 89 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEE
Confidence 46666665556667999985 56677888987654322 22346789999988866655788888888889999999
Q ss_pred eccCCCChHHH
Q 008547 177 ELCEGGELLDR 187 (562)
Q Consensus 177 e~~~~g~L~~~ 187 (562)
++++|.++...
T Consensus 90 ~~l~G~~~~~~ 100 (263)
T d1j7la_ 90 SEADGVLCSEE 100 (263)
T ss_dssp ECCSSEEHHHH
T ss_pred Eeccccccccc
Confidence 99998877543
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.54 E-value=4.4e-08 Score=87.10 Aligned_cols=72 Identities=18% Similarity=0.132 Sum_probs=58.8
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
......+..+|..+|.|++|+|+.+||..++.. +|..++.+++..+|+.+|.|+||.|+|+||+..+.....
T Consensus 103 ~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~-~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~~~~ 174 (189)
T d1qv0a_ 103 TLIREWGDAVFDIFDKDGSGTITLDEWKAYGKI-SGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFWY 174 (189)
T ss_dssp CHHHHHHHHHHHHTC----CEECHHHHHHHHHH-HSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCCCCcccchhhHHHHHh-cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhCC
Confidence 334456777899999999999999999999965 899999999999999999999999999999987765433
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.53 E-value=1.5e-08 Score=77.43 Aligned_cols=71 Identities=21% Similarity=0.400 Sum_probs=60.3
Q ss_pred hHHhhhhccccccc-cCCCCC-CCCHHHHHHHHHhh--CCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~--~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+.++|..+ |++++| .|+..||+.++... .+...+.+.++.+++.+|.|+||.|+|+||+..+..+
T Consensus 5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 45678889999888 999999 59999999999664 3455667889999999999999999999999877644
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.53 E-value=4.1e-08 Score=84.34 Aligned_cols=100 Identities=18% Similarity=0.306 Sum_probs=69.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCC---CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHH
Q 008547 405 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP---WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 481 (562)
Q Consensus 405 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~---~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 481 (562)
++.+++..++.+++|.++..++...+...+. .....+.+..+|+.+|.+++|.|+.+||..++..... ..+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~---~ls--- 125 (156)
T d1dtla_ 52 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE---TIT--- 125 (156)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-----CCC---
T ss_pred HHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCC---CCC---
Confidence 3445556677888888888887766543222 2345667888899999999999999998765443222 111
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
..++..+|+.+|.|+||.|+.+||.++|+
T Consensus 126 ~~e~~~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 126 EDDIEELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 24677889999999999999999988775
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.50 E-value=1.2e-08 Score=80.20 Aligned_cols=71 Identities=18% Similarity=0.353 Sum_probs=57.5
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCC------cccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~------~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.+..+..+.++|..+| +++|.|+..||+.+|...++. ..+...++.+++.+|.|+||.|+|+||+.++..+
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 4567888899999997 789999999999999664432 1233568899999999999999999999877653
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.48 E-value=4e-07 Score=77.57 Aligned_cols=107 Identities=13% Similarity=0.117 Sum_probs=77.6
Q ss_pred hccccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhh
Q 008547 394 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 472 (562)
Q Consensus 394 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~ 472 (562)
+....+++++..+. ..|.+++|.|+..||..++...+. ......++...|+.+|.+++|.|+.+||..++.....
T Consensus 38 lG~~~t~~e~~~~~----~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~ 113 (152)
T d1wdcc_ 38 LGINPRNEDVFAVG----GTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE 113 (152)
T ss_dssp TTCCCCHHHHHHTT----CCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS
T ss_pred hccCccHhhhhhhh----hhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCC
Confidence 33445566655543 357788999999999988865444 3455678889999999999999999999887765432
Q ss_pred hcccccHHHHHHHHHHHHHhcC--CCCCccCHHHHHHHhc
Q 008547 473 LEEHDSEKWHLRSQAAFEKFDI--DRDGFITPEELRMHTG 510 (562)
Q Consensus 473 ~~~~~~~~~~~~~~~~F~~~D~--d~~G~I~~~El~~~l~ 510 (562)
... ..++..+++.+|. |++|.|+.+||.+.+.
T Consensus 114 ~ls------~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~ 147 (152)
T d1wdcc_ 114 RLS------DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147 (152)
T ss_dssp CCC------HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred CCC------HHHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence 221 2467778888885 4568999999987654
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.47 E-value=2.9e-07 Score=80.32 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=79.0
Q ss_pred cHHHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcc--cccH-------HHHHHHHHHHHHhcCCCCCccCHHHHHHHh
Q 008547 439 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE--HDSE-------KWHLRSQAAFEKFDIDRDGFITPEELRMHT 509 (562)
Q Consensus 439 ~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~--~~~~-------~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 509 (562)
+.+.+..+|+.+|.|++|.|+++||..++........ .... .........+...|.+++|.|+..++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 4678999999999999999999999887765432211 1000 111223557789999999999999987766
Q ss_pred cccC--------------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 510 GLKG--------------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 510 ~~~~--------------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
.... .+..+|..+|.|+||.|+.+||..++....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~ 132 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG 132 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC
Confidence 4332 267789999999999999999999987643
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.46 E-value=1e-07 Score=84.45 Aligned_cols=71 Identities=21% Similarity=0.220 Sum_probs=62.5
Q ss_pred chHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 399 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 399 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
.......+..+|..+|.|++|+|+.+||+.+|.. +|...+.+++..+|+.+|.|++|.|+|+||+..+...
T Consensus 100 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~~ 170 (187)
T d1uhka1 100 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA-AGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 170 (187)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCcccchHHHHHHHHH-hCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHh
Confidence 3444566888999999999999999999999964 8889999999999999999999999999998766543
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.46 E-value=6.4e-08 Score=81.29 Aligned_cols=97 Identities=13% Similarity=0.051 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhc--CCCCCccCHHHHHHHhcccC------
Q 008547 442 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD--IDRDGFITPEELRMHTGLKG------ 513 (562)
Q Consensus 442 ~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D--~d~~G~I~~~El~~~l~~~~------ 513 (562)
++++.|..+|.+++|.|+.+|+..++..+..... ..++.+++..+| .+++|.|+.+||..++....
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t------~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~ 74 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPT------NAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG 74 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCC------HHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCC------HHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc
Confidence 3678999999999999999999887765433222 235666776666 46899999999988775322
Q ss_pred ---CHHHHHHHhcCCCCCcccHHHHHHHHHhccc
Q 008547 514 ---SIDPLLEEADIDKDGRISLSEFRRLLRTASI 544 (562)
Q Consensus 514 ---~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~~ 544 (562)
++.++|+.+|.|++|.|+.+||.+++...+.
T Consensus 75 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 108 (139)
T d1w7jb1 75 TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE 108 (139)
T ss_dssp ---CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSS
T ss_pred HHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCC
Confidence 4778899999999999999999999987653
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.43 E-value=1.6e-07 Score=70.98 Aligned_cols=71 Identities=28% Similarity=0.389 Sum_probs=57.5
Q ss_pred hHHhhhhccccccc-cCCCCC-CCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 400 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 400 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
+..+..+.++|..+ +.++++ .|+..||+.+|...++ ...+...++.+++.+|.|+||.|+|+||+..+..+
T Consensus 4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 34677889999988 556565 6999999999976443 34567889999999999999999999999876643
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.42 E-value=8.5e-08 Score=75.03 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=56.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
..+.++|+.+|.+++|+|+.+|+..++.+ .| ++.+++..+|+.+|.|++|.|+++||+.++..+.
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li~ 75 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHH-cC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHH
Confidence 35668899999999999999999999954 44 6789999999999999999999999987765443
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=1.9e-07 Score=73.13 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhcc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGL 511 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 511 (562)
..+..+|+.+|.|+||+||.+||.+++..
T Consensus 68 ~~v~~~~~~~D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 68 RMREHVMKNVDTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp HHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 46788999999999999999999988764
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.37 E-value=1.1e-07 Score=53.85 Aligned_cols=30 Identities=33% Similarity=0.382 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 483 LRSQAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 483 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
+++.+.|++||+|+||+|+.+||..++...
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 578889999999999999999999988653
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.27 E-value=5.9e-07 Score=68.00 Aligned_cols=61 Identities=20% Similarity=0.335 Sum_probs=50.1
Q ss_pred HHHHHHHHHh-cCCCC-CccCHHHHHHHhccc-----C------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..| +++|+ +.|+..||+.++... . .++++|+.+|.|+||.|+|+||+.++.+..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~la 82 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 82 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 4577789888 45665 579999999999742 1 289999999999999999999999987643
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.26 E-value=9.6e-07 Score=67.40 Aligned_cols=61 Identities=23% Similarity=0.370 Sum_probs=49.8
Q ss_pred HHHHHHHHHhc-CCCC-CccCHHHHHHHhcccC-----------CHHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 483 LRSQAAFEKFD-IDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 483 ~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
..+..+|..|. ++|+ +.|+..||+.++...- .++++|+.+|.|+||.|+|+||+.++.+..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la 82 (95)
T d1qlsa_ 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA 82 (95)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 35667888774 4565 6799999999996522 299999999999999999999999987654
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=7.2e-08 Score=83.99 Aligned_cols=96 Identities=10% Similarity=0.047 Sum_probs=67.1
Q ss_pred HHHHHHh--cCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccC---CHHH
Q 008547 443 VLEILQA--IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---SIDP 517 (562)
Q Consensus 443 ~~~l~~~--~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---~~~~ 517 (562)
+..++.. +|.|++|.|+++|+..++....... ......+..+|...|.+++|.|+.+||..++.... ++..
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~----~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~ 82 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRV----EAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDE 82 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHH----HHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhH----HHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHH
Confidence 3445544 7999999999999987764322110 11124566789999999999999999998887554 5888
Q ss_pred HHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 518 LLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 518 ~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
+|..+|.|++|.||.+||..+|...
T Consensus 83 ~F~~~d~d~~~~it~~el~~fL~~~ 107 (170)
T d2zkmx1 83 IFTSYHAKAKPYMTKEHLTKFINQK 107 (170)
T ss_dssp TCC--------CCCHHHHHHHHHHT
T ss_pred HHHHHcCCCCCcccHHHHHHHHHHH
Confidence 9999999999999999999999864
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.12 E-value=2.5e-06 Score=64.49 Aligned_cols=70 Identities=20% Similarity=0.378 Sum_probs=55.6
Q ss_pred HHhhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
..+..+..+|..+ +.+++ +.|+..||+.++.+.++ .......++.+++.+|.|+||.|+|+||+..+..+
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4567788889887 45554 57999999999977443 34456779999999999999999999998776643
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.09 E-value=6.7e-07 Score=86.18 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=66.1
Q ss_pred HHHHHHHHhcCCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHH
Q 008547 441 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 520 (562)
Q Consensus 441 ~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 520 (562)
..+..+|..+|.|++|.|+++||..++......... ..+..+|..+|.|++|.|+..||..+......+...|.
T Consensus 122 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F~ 195 (321)
T d1ij5a_ 122 NILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPE------GPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFR 195 (321)
T ss_dssp HHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCS------SHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCHH
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccH------HHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHHH
Confidence 346689999999999999999999877654332221 25777899999999999998888765543333333455
Q ss_pred HhcCCCCCcccHHHHHHHHHhc
Q 008547 521 EADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 521 ~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
.+|.+++|.++..+|...+...
T Consensus 196 ~~d~d~~~~i~~~~~~~~~~~~ 217 (321)
T d1ij5a_ 196 KIDTNSNGTLSRKEFREHFVRL 217 (321)
T ss_dssp HHCTTCCSEECHHHHHHHHHHT
T ss_pred HHhhcccccchhHHHhhhhhcc
Confidence 5566666666666665555443
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.05 E-value=2.7e-06 Score=64.79 Aligned_cols=60 Identities=20% Similarity=0.322 Sum_probs=48.8
Q ss_pred HHHHHHHHHhc-CCCC-CccCHHHHHHHhcc-----cC------CHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 008547 483 LRSQAAFEKFD-IDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 483 ~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~eF~~~l~~~ 542 (562)
..+..+|..|. ++|+ +.++..||+.++.. .. .++++|+.+|.|+||.|+|+||+.++.+.
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 35677898884 4554 58999999999964 11 39999999999999999999999998764
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.01 E-value=7e-06 Score=81.28 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=50.6
Q ss_pred cceeeccCCeEEEEEEEcCCCCEEEEEEeccccc----CchhhHHHHHHHHHHHHHccCC--CCcceEEEEEEcCCeEEE
Q 008547 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM----ILPIAVEDVKREVKILQALAGH--ENVVKFYNAFEDDNYVYI 174 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~E~~~l~~l~~h--p~iv~l~~~~~~~~~~~l 174 (562)
.+.||.|....||++.+..+|+.|++|.-..... .-+........|...|+.+..+ ..+++++.+. ....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence 4468999999999998777788999996432110 0111233456788888877543 2355666543 344578
Q ss_pred EEeccCCCCh
Q 008547 175 AMELCEGGEL 184 (562)
Q Consensus 175 v~e~~~~g~L 184 (562)
|||++++..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987554
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.91 E-value=9.5e-06 Score=60.03 Aligned_cols=59 Identities=17% Similarity=0.296 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcC-CCC-CccCHHHHHHHhcccC---------C---HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 008547 483 LRSQAAFEKFDI-DRD-GFITPEELRMHTGLKG---------S---IDPLLEEADIDKDGRISLSEFRRLLRT 541 (562)
Q Consensus 483 ~~~~~~F~~~D~-d~~-G~I~~~El~~~l~~~~---------~---~~~~~~~~D~d~dG~i~~~eF~~~l~~ 541 (562)
..+..+|..|.. +|+ +.++..||+.++...- + ++++|+.+|.|+||.|+|+||+.++.+
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 356778988863 433 6899999999986311 2 799999999999999999999998864
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.90 E-value=1.4e-05 Score=73.69 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=52.0
Q ss_pred eeccC-CeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCC-CcceEEEEEEcCCeEEEEEeccCC
Q 008547 104 LGHGQ-FGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAMELCEG 181 (562)
Q Consensus 104 lG~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp-~iv~l~~~~~~~~~~~lv~e~~~~ 181 (562)
+..|. -+.||+.. ...+..+++|...... ...+..|...++.|..+. .+++++.+..+++..++||++++|
T Consensus 18 ~~~G~s~~~v~r~~-~~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLS-AQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp CSCTTSSCEEEEEE-CTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCcccCCeEEEEE-eCCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence 34444 46899886 3456678889765432 234677888888776432 256788888888899999999988
Q ss_pred CCh
Q 008547 182 GEL 184 (562)
Q Consensus 182 g~L 184 (562)
.++
T Consensus 91 ~~~ 93 (255)
T d1nd4a_ 91 QDL 93 (255)
T ss_dssp EET
T ss_pred ccc
Confidence 654
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=97.80 E-value=5.9e-06 Score=62.90 Aligned_cols=70 Identities=21% Similarity=0.288 Sum_probs=54.1
Q ss_pred HHhhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCC----CcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
..+..+..+|..+. .+++ +.|+..||+.+|..-++ .......++.+++.+|.|+||.|+|+||+..+..+
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 34667788888764 4554 57999999999965333 23345779999999999999999999998777654
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=97.78 E-value=3.1e-06 Score=50.11 Aligned_cols=28 Identities=36% Similarity=0.672 Sum_probs=25.8
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALA 431 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~ 431 (562)
++++++|+.||+|++|+|+..||+.+|.
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~ 30 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMT 30 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4788999999999999999999999983
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=5.2e-06 Score=66.57 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=64.8
Q ss_pred cccchHHhhhhcccccccc---CCCCCCCCHHHHHHHHHhhCCCc-ccHHHHHHHHHhcCCCCC--------cccchhhH
Q 008547 396 STLDDEELADLRDQFDAID---VDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTD--------GLVDFSEF 463 (562)
Q Consensus 396 ~~~~~~~~~~l~~~F~~~D---~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~--------g~I~~~ef 463 (562)
+++++.++..|.+.|.... .+.+|.|+.++|+.++...++.. .++..++.+|+.||.+++ |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 4578889999999997543 25689999999999997766654 457899999999999876 88999999
Q ss_pred HHHHhhhhhhcc
Q 008547 464 VAATLHVHQLEE 475 (562)
Q Consensus 464 ~~~~~~~~~~~~ 475 (562)
+..+..+.....
T Consensus 100 v~~LS~l~~G~~ 111 (118)
T d1tuza_ 100 SCYFSLLEGGRP 111 (118)
T ss_dssp HHHHHHHHSCCC
T ss_pred HHHHHHHcCCCH
Confidence 988877665443
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=97.74 E-value=1.3e-05 Score=60.81 Aligned_cols=70 Identities=24% Similarity=0.409 Sum_probs=53.3
Q ss_pred HHhhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCCCc----ccHHHHHHHHHhcCCCCCcccchhhHHHHHhhh
Q 008547 401 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWK----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 470 (562)
Q Consensus 401 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~~~----~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~ 470 (562)
..+..+..+|..+. .+++ +.|+..||+.++.+-++.- .....++.+++.+|.|+||.|+|+||+..+..+
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 45667888888873 4444 4799999999997755532 334569999999999999999999999777543
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.69 E-value=2.1e-05 Score=58.12 Aligned_cols=68 Identities=21% Similarity=0.352 Sum_probs=52.6
Q ss_pred HHhhhhcccccccc-CCC-CCCCCHHHHHHHHHhhCCCcc-----cHHHHHHHHHhcCCCCCcccchhhHHHHHh
Q 008547 401 EELADLRDQFDAID-VDK-NGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 401 ~~~~~l~~~F~~~D-~~~-~G~i~~~el~~~l~~~~~~~~-----~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~ 468 (562)
..+..+..+|..+. .++ .+.|+..||+.++..-++.-+ ....++.+++.+|.|+||.|+|+||+..+.
T Consensus 7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 34567778888874 333 468999999999987665322 345589999999999999999999997654
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=2.8e-05 Score=62.12 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcC------CCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHH
Q 008547 416 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID------CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 489 (562)
Q Consensus 416 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d------~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F 489 (562)
+..+.|+.++|.++... . ..+..++..+++.|. ...+|.|++++|..++.......... ..-+.++|
T Consensus 3 ~~~s~l~p~~l~~L~~~-T--~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~----~~l~~rlF 75 (118)
T d1tuza_ 3 KERGLISPSDFAQLQKY-M--EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP----RHLSLALF 75 (118)
T ss_dssp CCCSCSCHHHHHHHHHH-H--HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCC----HHHHHHHH
T ss_pred cccCCCCHHHHHHHHHH-c--CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCch----HHHHHHHH
Confidence 45678999999998744 2 345567778887773 13578999999998776544322211 23678899
Q ss_pred HHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 490 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 490 ~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
+.||+|+++.++ ..++|.|+|.||+..|-
T Consensus 76 ~~FD~~~d~~~~----------------------~~~~g~I~f~efv~~LS 104 (118)
T d1tuza_ 76 QSFETGHCLNET----------------------NVTKDVVCLNDVSCYFS 104 (118)
T ss_dssp HHSCCCCCTTCC----------------------CCCSCCEEHHHHHHHHH
T ss_pred HHHccccccccc----------------------cCCCceeeHHHHHHHHH
Confidence 999999874433 33567777777776654
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.37 E-value=3.3e-05 Score=43.53 Aligned_cols=27 Identities=30% Similarity=0.592 Sum_probs=20.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHH
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQAL 430 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l 430 (562)
.+|.+.|..||+|.||+|+.+||..++
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~il 30 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEIL 30 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHH
Confidence 456667777788888888888887777
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.10 E-value=0.00067 Score=66.60 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=52.2
Q ss_pred cceeeccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCcceEEEEEEcCCeEE
Q 008547 101 GKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (562)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~l~~~~~~~~~~~ 173 (562)
++.|+.|---.+|++.... .++.|++++.-... ......+|..+++.+..+.-.+++++++.+ .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-----~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-----hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 3568888888999987543 34567777764221 223456899999999766555678887753 5
Q ss_pred EEEeccCCCCh
Q 008547 174 IAMELCEGGEL 184 (562)
Q Consensus 174 lv~e~~~~g~L 184 (562)
+|+||++|..|
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 78999987544
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.00023 Score=58.35 Aligned_cols=53 Identities=25% Similarity=0.379 Sum_probs=46.1
Q ss_pred HHHHhcCC-CCCccCHHHHHHHhcccC--C--HHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 488 AFEKFDID-RDGFITPEELRMHTGLKG--S--IDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 488 ~F~~~D~d-~~G~I~~~El~~~l~~~~--~--~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
-|..+|.| .||+|+..||+.+...+. + +..+|..-|.|+||.||+.||...+.
T Consensus 82 ~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 82 QFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred ehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 59999999 599999999998765332 2 78899999999999999999998875
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.75 E-value=0.0027 Score=60.25 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=44.9
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHccCCCCc--ceEE-----EEEEcCCeEEEEEeccC
Q 008547 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV--VKFY-----NAFEDDNYVYIAMELCE 180 (562)
Q Consensus 108 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i--v~l~-----~~~~~~~~~~lv~e~~~ 180 (562)
.--.||++. ..+|..|++|+...... ..+++..|...+..|..+ .| +..+ ..+...+..+.++++++
T Consensus 34 ~EN~vy~v~-~~dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~-gipv~~p~~~~g~~~~~~~~~~~~l~~~~~ 107 (325)
T d1zyla1 34 YENRVYQFQ-DEDRRRFVVKFYRPERW----TADQILEEHQFALQLVND-EVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 107 (325)
T ss_dssp SSSEEEEEC-CTTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHT-TCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred ccceeEEEE-cCCCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhc-CCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence 345899996 35788899998765432 346677899988888622 12 1111 12234667889999997
Q ss_pred CC
Q 008547 181 GG 182 (562)
Q Consensus 181 ~g 182 (562)
|.
T Consensus 108 G~ 109 (325)
T d1zyla1 108 GR 109 (325)
T ss_dssp CE
T ss_pred Cc
Confidence 64
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.55 E-value=0.012 Score=55.24 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=25.0
Q ss_pred cCceeccCCCCceEeccCCCCCCeEEeeccCcc
Q 008547 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 250 (562)
Q Consensus 218 ~~iiHrDlkp~NIll~~~~~~~~vkl~DfG~a~ 250 (562)
.|+||+|+.++||+++. +..+-|+||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~---~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLG---DELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEET---TEEEEECCCTTCE
T ss_pred cccccCCcchhhhhccc---ccceeEecccccc
Confidence 47999999999999983 4455799999875
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.98 E-value=0.017 Score=46.94 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcCCC-CCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhccc
Q 008547 440 ESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 512 (562)
Q Consensus 440 ~~~~~~l~~~~d~~-~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 512 (562)
..-+...|..+|.| .||.|+..|...+...+. ..+ .-++..|+..|.|+||.|+..|...-+...
T Consensus 76 ~~~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~---~~e-----~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v~ 141 (151)
T d1sraa_ 76 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PME-----HCTTRFFETCDLDNDKYIALDEWAGCFGIK 141 (151)
T ss_dssp HHHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS---TTG-----GGHHHHHHHHCTTCSSSEEHHHHHHHTTCC
T ss_pred cccceeehhhcCCCCCCCccCHHHHHHHHHhhc---CCc-----hHHHHHHHHhcCCCCCcCCHHHHHHHcCCC
Confidence 34677899999999 589999999865322111 111 246667899999999999999998877643
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.66 E-value=0.19 Score=37.16 Aligned_cols=58 Identities=17% Similarity=0.134 Sum_probs=45.6
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHhcccC--------CHHHHHHHhcCCC----CCcccHHHHHHHHHhc
Q 008547 484 RSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEEADIDK----DGRISLSEFRRLLRTA 542 (562)
Q Consensus 484 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~----dG~i~~~eF~~~l~~~ 542 (562)
++..+|..+-.+ .+.++.++|.+.|...- .+..+|..+..+. .|.+++++|..+|...
T Consensus 9 ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~ 78 (94)
T d1qasa1 9 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 78 (94)
T ss_dssp HHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred HHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence 678899999654 47899999999997432 1677888887653 4779999999999754
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.57 E-value=0.3 Score=33.69 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccCCHHHHHHHhcC-----CCCCcccHHHHHHHHHhc
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI-----DKDGRISLSEFRRLLRTA 542 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~-----d~dG~i~~~eF~~~l~~~ 542 (562)
.+++..+|+.+- ++..+||.+||++-|... +++-++..+-. -..|..+|..|.+.|-+.
T Consensus 7 aEqv~~aFr~lA-~~KpyVT~~dL~~~L~pe-qaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ge 70 (73)
T d1h8ba_ 7 AEQVIASFRILA-SDKPYILAEELRRELPPD-QAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGE 70 (73)
T ss_dssp HHHHHHHHHHHT-TSCSSBCHHHHHHHSCHH-HHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHh-CCCCeeCHHHHHhhcCHH-HHHHHHHHCcccCCCCCCCCcccHHHHHHHHhcc
Confidence 357888999995 678999999999988755 47777777632 247789999999888654
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=89.28 E-value=0.28 Score=32.69 Aligned_cols=48 Identities=31% Similarity=0.426 Sum_probs=37.6
Q ss_pred cCCCCCccCHHHHHHHhcccC---C-HHHHHHHhcCCCCCcccHHHHHHHHH
Q 008547 493 DIDRDGFITPEELRMHTGLKG---S-IDPLLEEADIDKDGRISLSEFRRLLR 540 (562)
Q Consensus 493 D~d~~G~I~~~El~~~l~~~~---~-~~~~~~~~D~d~dG~i~~~eF~~~l~ 540 (562)
|.|+||.|+.-++..+..-.- . -+..+..+|.|+||.|+..+...+.+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDDAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChhhhhccccCCCCCCCHHHHHHHHH
Confidence 679999999999987664321 1 34567779999999999999987765
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.77 E-value=0.21 Score=37.00 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=50.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCC-cccHHHHHHHHHhcCCCC----CcccchhhHHHHHhhh
Q 008547 404 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNT----DGLVDFSEFVAATLHV 470 (562)
Q Consensus 404 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~----~g~I~~~ef~~~~~~~ 470 (562)
.++..+|..+-.+ .+.++.++|..+|...=+. ..+.+.+..++..+.++. .+.+++++|...+...
T Consensus 8 ~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~ 78 (94)
T d1qasa1 8 AEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 78 (94)
T ss_dssp HHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred HHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence 4566778777444 4679999999999764443 467788899999998763 4679999999877643
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=85.82 E-value=0.74 Score=30.45 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=36.9
Q ss_pred CCCCCcccchhhHHHHHhhhhhhcccccHHHHHHHHHHHHHhcCCCCCccCHHHHHHHhc
Q 008547 451 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 510 (562)
Q Consensus 451 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 510 (562)
|.|+||.|+..+.......+........ ..|...|.|+||.|+..++..+.+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~--------~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTD--------DAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCH--------HHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCh--------hhhhccccCCCCCCCHHHHHHHHH
Confidence 6788999999988766554433222111 147889999999999999877654
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=84.52 E-value=2 Score=28.15 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=56.7
Q ss_pred ccchHHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcC-CCCC-cccchhhHHHHHh
Q 008547 397 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID-CNTD-GLVDFSEFVAATL 468 (562)
Q Consensus 397 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d-~~~~-g~I~~~ef~~~~~ 468 (562)
.+-+++..+--++|+.||.+....-...+-..+|.+ +|...+..+.+.+++..- +.+| ..|--+|++..+.
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltk-lgqtytkreteaimkeargpkgdkknigpeewltlcs 79 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCS 79 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHH-hhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHH
Confidence 355677888889999999999998889999999976 999999999999888763 3343 3588888886554
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=84.49 E-value=0.48 Score=32.79 Aligned_cols=18 Identities=39% Similarity=0.462 Sum_probs=12.0
Q ss_pred CCCCCcccchhhHHHHHh
Q 008547 451 DCNTDGLVDFSEFVAATL 468 (562)
Q Consensus 451 d~~~~g~I~~~ef~~~~~ 468 (562)
|.|+||.|+..+....+.
T Consensus 8 DvN~DG~Vd~~D~~~~~~ 25 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKR 25 (71)
T ss_dssp CSSSSSBSSGGGHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHH
Confidence 567777777777664443
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
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class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=83.34 E-value=2.1 Score=31.71 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=53.0
Q ss_pred hHHhhhhccccccccCCCCCCCCHHHHHHHHHh--hC-CCcccHHHHHHHHHhcCCCCCcccchhhHHHHHhhhh
Q 008547 400 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 471 (562)
Q Consensus 400 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~--~~-~~~~~~~~~~~l~~~~d~~~~g~I~~~ef~~~~~~~~ 471 (562)
..++...-+.|..|-.-..-.++...|..++.. ++ +...+..+++-+|..+-..+ .+|+|++|..++..+.
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~lA 77 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFVA 77 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHHH
Confidence 455666677777776433346999999999966 45 35688899999999987654 4699999998876543
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=81.02 E-value=0.15 Score=35.52 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=36.5
Q ss_pred cCCCCCccCHHHHHHHhcccC-C-HHHHHHHhcCCCCCcccHHHHHHHHHhcc
Q 008547 493 DIDRDGFITPEELRMHTGLKG-S-IDPLLEEADIDKDGRISLSEFRRLLRTAS 543 (562)
Q Consensus 493 D~d~~G~I~~~El~~~l~~~~-~-~~~~~~~~D~d~dG~i~~~eF~~~l~~~~ 543 (562)
|.|+||.|+..++..++.... . -..-+..+|.|+||.|+..++..+.+-..
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~~~~aDvn~DG~Id~~D~~~l~~~il 60 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISINTDNADLNEDGRVNSTDLGILKRYIL 60 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCCCGGGTCSSSSSSCSSHHHHHHHHHTT
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcCCCcceecCCCCCcCHHHHHHHHHHHH
Confidence 679999999999876654321 0 01112358999999999999998777643
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.61 E-value=0.87 Score=31.32 Aligned_cols=59 Identities=17% Similarity=0.325 Sum_probs=43.6
Q ss_pred HHhhhhccccccccCCCCCCCCHHHHHHHHHhhCCCcccHHHHHHHHHhcCC----C-CCcccchhhHHHHHh
Q 008547 401 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC----N-TDGLVDFSEFVAATL 468 (562)
Q Consensus 401 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~----~-~~g~I~~~ef~~~~~ 468 (562)
+..+++.+.|+.+ .+++.+|+.+||++.| +.++++-+...+-. + ..|..||..|...+.
T Consensus 5 ~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L--------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ 68 (73)
T d1h8ba_ 5 DTAEQVIASFRIL-ASDKPYILAEELRREL--------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 68 (73)
T ss_dssp STHHHHHHHHHHH-TTSCSSBCHHHHHHHS--------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred ccHHHHHHHHHHH-hCCCCeeCHHHHHhhc--------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence 4456777888888 5779999999999765 34567777777632 2 367899999987664
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=80.27 E-value=1.7 Score=28.46 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHhcccCC------HHHHHHHhcC-CCCC-cccHHHHHHHH
Q 008547 482 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADI-DKDG-RISLSEFRRLL 539 (562)
Q Consensus 482 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~-d~dG-~i~~~eF~~~l 539 (562)
..+..++|+.||+|..+.--..+-..+|..+|+ .+.+++++-. .||. .|.-+||..+-
T Consensus 13 kdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlc 78 (86)
T d1j7qa_ 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLC 78 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHH
Confidence 357888999999999999999999999988873 6778887642 3443 38888988654
|