Query 008551
Match_columns 561
No_of_seqs 239 out of 867
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 13:35:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008551.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008551hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02219 probable galactinol-- 100.0 4E-160 9E-165 1302.5 52.8 557 1-561 194-775 (775)
2 PLN02355 probable galactinol-- 100.0 3E-159 6E-164 1299.3 54.5 561 1-561 198-758 (758)
3 PLN02684 Probable galactinol-- 100.0 7E-158 2E-162 1284.6 53.4 552 1-561 197-750 (750)
4 PLN02982 galactinol-raffinose 100.0 7E-154 1E-158 1249.6 50.4 557 1-561 217-865 (865)
5 PLN02711 Probable galactinol-- 100.0 1E-152 3E-157 1244.0 51.9 552 1-561 208-777 (777)
6 PF05691 Raffinose_syn: Raffin 100.0 4E-149 9E-154 1228.0 50.7 540 1-545 190-747 (747)
7 PLN02229 alpha-galactosidase 100.0 4.9E-47 1.1E-51 400.1 30.0 345 5-467 62-422 (427)
8 PLN02692 alpha-galactosidase 100.0 1.2E-46 2.6E-51 395.5 29.6 341 5-465 55-411 (412)
9 PLN02808 alpha-galactosidase 100.0 1.1E-45 2.3E-50 387.7 29.5 340 4-464 30-385 (386)
10 PLN03231 putative alpha-galact 100.0 1.1E-41 2.4E-46 353.6 25.8 303 7-350 2-352 (357)
11 PLN02899 alpha-galactosidase 100.0 7.3E-40 1.6E-44 353.5 27.2 311 4-352 29-384 (633)
12 KOG2366 Alpha-D-galactosidase 100.0 4.8E-34 1E-38 290.1 18.5 345 6-466 33-413 (414)
13 PF02065 Melibiase: Melibiase; 99.9 6.5E-24 1.4E-28 225.6 18.3 211 4-262 39-257 (394)
14 COG3345 GalA Alpha-galactosida 99.8 2.2E-18 4.7E-23 182.8 13.7 199 6-264 292-524 (687)
15 cd06592 GH31_glucosidase_KIAA1 99.5 8.7E-14 1.9E-18 144.3 12.9 147 4-200 11-165 (303)
16 cd06593 GH31_xylosidase_YicI Y 99.3 7.3E-11 1.6E-15 122.7 17.5 204 13-266 14-227 (308)
17 cd06598 GH31_transferase_CtsZ 98.9 5E-08 1.1E-12 102.0 15.9 136 20-200 21-164 (317)
18 cd06595 GH31_xylosidase_XylS-l 98.8 2.7E-07 5.9E-12 95.4 18.1 201 7-270 13-219 (292)
19 cd06599 GH31_glycosidase_Aec37 98.7 4.4E-08 9.6E-13 102.4 10.5 150 7-200 12-168 (317)
20 PRK10658 putative alpha-glucos 98.7 1.3E-07 2.8E-12 107.8 14.8 140 16-200 276-418 (665)
21 cd06591 GH31_xylosidase_XylS X 98.7 2.8E-07 6.1E-12 96.5 14.6 134 20-200 21-159 (319)
22 cd06594 GH31_glucosidase_YihQ 98.6 1.6E-06 3.4E-11 90.8 17.1 200 21-267 21-236 (317)
23 cd06589 GH31 The enzymes of gl 98.6 2.7E-06 5.9E-11 86.7 18.5 82 2-117 3-85 (265)
24 cd06597 GH31_transferase_CtsY 98.6 2.5E-06 5.4E-11 90.1 18.7 223 3-268 8-256 (340)
25 cd06604 GH31_glucosidase_II_Ma 98.6 2E-07 4.2E-12 98.5 10.0 132 20-200 21-159 (339)
26 cd06602 GH31_MGAM_SI_GAA This 98.5 1.9E-06 4.2E-11 90.9 14.1 204 2-268 7-224 (339)
27 PF01055 Glyco_hydro_31: Glyco 98.4 1.4E-06 3.1E-11 95.0 12.5 210 2-268 26-258 (441)
28 cd06600 GH31_MGAM-like This fa 98.4 4.4E-06 9.6E-11 87.4 14.2 180 7-243 12-200 (317)
29 cd06601 GH31_lyase_GLase GLase 98.3 3.8E-06 8.3E-11 88.4 11.4 123 4-199 9-132 (332)
30 PF10566 Glyco_hydro_97: Glyco 98.3 9.8E-06 2.1E-10 82.5 12.7 125 16-229 25-149 (273)
31 cd06603 GH31_GANC_GANAB_alpha 98.2 4E-06 8.6E-11 88.6 8.4 141 7-200 12-162 (339)
32 PRK10426 alpha-glucosidase; Pr 98.2 2.9E-05 6.2E-10 88.5 15.4 137 21-201 219-364 (635)
33 COG1501 Alpha-glucosidases, fa 97.9 0.00023 4.9E-09 82.5 15.2 205 8-268 266-486 (772)
34 PLN02763 hydrolase, hydrolyzin 97.8 0.00014 3E-09 85.4 11.7 146 2-200 184-336 (978)
35 KOG1065 Maltase glucoamylase a 95.6 0.082 1.8E-06 60.9 11.3 142 10-200 296-448 (805)
36 TIGR01515 branching_enzym alph 91.4 9.8 0.00021 43.7 18.0 142 20-200 153-298 (613)
37 PF13200 DUF4015: Putative gly 88.5 15 0.00033 38.6 15.1 127 21-202 11-149 (316)
38 cd06596 GH31_CPE1046 CPE1046 i 86.6 18 0.00038 37.0 13.8 160 21-297 43-203 (261)
39 PRK10933 trehalose-6-phosphate 80.9 19 0.00041 40.8 12.6 31 172-202 175-205 (551)
40 cd02932 OYE_YqiM_FMN Old yello 80.6 22 0.00048 37.5 12.3 70 19-119 30-100 (336)
41 TIGR02456 treS_nterm trehalose 78.2 58 0.0013 36.8 15.4 30 172-201 172-201 (539)
42 cd04734 OYE_like_3_FMN Old yel 78.1 45 0.00098 35.4 13.7 70 19-119 30-100 (343)
43 PRK10785 maltodextrin glucosid 77.5 66 0.0014 36.9 15.7 64 21-112 177-241 (598)
44 PF02638 DUF187: Glycosyl hydr 75.6 41 0.00089 35.2 12.4 142 21-200 17-164 (311)
45 cd02871 GH18_chitinase_D-like 72.0 45 0.00098 34.8 11.7 64 172-242 92-155 (312)
46 PRK14705 glycogen branching en 71.5 1.7E+02 0.0037 36.5 17.8 68 172-239 878-957 (1224)
47 PRK12568 glycogen branching en 70.8 2E+02 0.0044 33.9 17.4 69 172-240 382-462 (730)
48 TIGR02402 trehalose_TreZ malto 69.9 1.4E+02 0.0031 33.8 15.8 28 174-201 220-248 (542)
49 COG1649 Uncharacterized protei 64.6 73 0.0016 34.8 11.5 144 19-201 60-210 (418)
50 PF00724 Oxidored_FMN: NADH:fl 64.1 1.3E+02 0.0028 31.8 13.4 70 20-119 33-103 (341)
51 PRK14706 glycogen branching en 63.8 1.9E+02 0.0041 33.5 15.5 67 172-238 280-356 (639)
52 COG0296 GlgB 1,4-alpha-glucan 61.7 65 0.0014 37.1 11.0 96 95-203 213-309 (628)
53 PRK13523 NADPH dehydrogenase N 61.5 1.8E+02 0.0039 30.8 13.8 29 171-199 133-164 (337)
54 TIGR02403 trehalose_treC alpha 58.2 1.2E+02 0.0025 34.4 12.4 30 173-202 169-198 (543)
55 cd02930 DCR_FMN 2,4-dienoyl-Co 56.8 2.6E+02 0.0056 29.7 14.1 22 97-119 78-100 (353)
56 PLN02361 alpha-amylase 56.4 2.3E+02 0.0049 30.9 13.7 77 4-112 14-91 (401)
57 PLN02784 alpha-amylase 52.9 2.8E+02 0.006 33.4 14.2 78 4-112 505-583 (894)
58 cd02929 TMADH_HD_FMN Trimethyl 51.3 3.4E+02 0.0073 29.1 14.0 22 97-119 84-106 (370)
59 PRK14582 pgaB outer membrane N 49.2 3E+02 0.0065 32.1 13.8 139 21-203 332-471 (671)
60 PRK05402 glycogen branching en 48.3 5.2E+02 0.011 30.4 17.2 29 172-200 378-407 (726)
61 cd02803 OYE_like_FMN_family Ol 48.2 52 0.0011 34.3 7.1 22 97-119 78-100 (327)
62 PLN02447 1,4-alpha-glucan-bran 44.7 6.1E+02 0.013 30.2 16.4 63 172-234 364-440 (758)
63 COG3469 Chitinase [Carbohydrat 43.8 44 0.00096 34.0 5.3 27 173-199 117-143 (332)
64 PRK08255 salicylyl-CoA 5-hydro 42.0 3.2E+02 0.0068 32.4 13.0 22 97-119 476-499 (765)
65 PRK12313 glycogen branching en 41.8 6E+02 0.013 29.3 17.5 29 172-200 283-312 (633)
66 KOG1066 Glucosidase II catalyt 40.6 93 0.002 36.2 7.7 125 8-186 359-493 (915)
67 COG1902 NemA NADH:flavin oxido 39.6 2.7E+02 0.0059 29.9 10.9 22 97-119 84-106 (363)
68 cd06544 GH18_narbonin Narbonin 37.4 72 0.0016 32.4 5.9 28 174-201 97-124 (253)
69 cd04747 OYE_like_5_FMN Old yel 37.0 5.6E+02 0.012 27.5 15.9 30 171-200 135-167 (361)
70 cd00598 GH18_chitinase-like Th 36.0 1.3E+02 0.0028 28.6 7.3 65 171-243 85-149 (210)
71 PLN02803 beta-amylase 34.3 1E+02 0.0022 34.7 6.7 62 21-119 105-168 (548)
72 cd02875 GH18_chitobiase Chitob 34.1 83 0.0018 33.6 6.0 31 171-201 93-123 (358)
73 PLN02899 alpha-galactosidase 33.5 1.1E+02 0.0025 35.0 7.1 78 366-463 550-631 (633)
74 PF15016 DUF4520: Domain of un 33.4 89 0.0019 26.4 4.8 48 503-550 9-60 (85)
75 cd04735 OYE_like_4_FMN Old yel 33.1 5.4E+02 0.012 27.3 12.0 22 97-119 79-101 (353)
76 PLN02801 beta-amylase 32.9 1.1E+02 0.0024 34.2 6.7 63 20-119 34-98 (517)
77 KOG2500 Uncharacterized conser 32.8 29 0.00064 34.4 2.1 36 434-469 41-77 (253)
78 cd02931 ER_like_FMN Enoate red 32.7 4.4E+02 0.0094 28.4 11.3 29 171-199 141-172 (382)
79 PLN02411 12-oxophytodienoate r 32.3 6.8E+02 0.015 27.1 13.8 22 97-119 88-110 (391)
80 cd06548 GH18_chitinase The GH1 31.9 1.4E+02 0.0031 31.1 7.3 31 171-201 106-136 (322)
81 PLN02705 beta-amylase 31.2 1.2E+02 0.0026 34.7 6.6 63 20-119 265-329 (681)
82 PLN00197 beta-amylase; Provisi 30.5 1.3E+02 0.0028 34.0 6.8 63 20-119 124-188 (573)
83 PRK05628 coproporphyrinogen II 30.0 4.6E+02 0.01 27.9 11.0 26 173-198 220-245 (375)
84 cd02879 GH18_plant_chitinase_c 28.8 1.9E+02 0.004 30.0 7.4 69 171-242 89-157 (299)
85 PLN02161 beta-amylase 28.7 1.4E+02 0.0031 33.4 6.6 57 20-113 114-170 (531)
86 PLN00196 alpha-amylase; Provis 28.5 1.6E+02 0.0034 32.4 7.1 33 4-38 27-59 (428)
87 PRK07379 coproporphyrinogen II 27.9 5.3E+02 0.012 27.8 11.1 70 97-198 183-252 (400)
88 cd06543 GH18_PF-ChiA-like PF-C 27.6 2.5E+02 0.0054 29.2 8.0 64 173-244 87-150 (294)
89 smart00642 Aamy Alpha-amylase 27.5 2.8E+02 0.006 26.1 7.8 81 5-112 4-85 (166)
90 PLN02905 beta-amylase 27.2 1.5E+02 0.0033 34.0 6.6 63 20-119 283-347 (702)
91 PLN03244 alpha-amylase; Provis 25.9 7.7E+02 0.017 29.6 12.1 31 172-202 505-536 (872)
92 COG0071 IbpA Molecular chapero 25.4 1.8E+02 0.0039 26.7 5.9 46 512-559 99-145 (146)
93 PRK14839 undecaprenyl pyrophos 25.4 4.2E+02 0.0092 26.8 8.9 46 288-333 168-216 (239)
94 PF00704 Glyco_hydro_18: Glyco 24.5 2.2E+02 0.0049 29.3 7.2 31 171-201 96-126 (343)
95 PF14307 Glyco_tran_WbsX: Glyc 24.4 8.5E+02 0.018 25.7 13.1 145 16-241 51-199 (345)
96 cd06546 GH18_CTS3_chitinase GH 22.9 1.8E+02 0.0039 29.5 5.9 29 172-200 94-122 (256)
97 PLN02960 alpha-amylase 22.6 1.4E+03 0.031 27.7 17.4 31 172-202 530-561 (897)
98 KOG2806 Chitinase [Carbohydrat 22.5 1.7E+02 0.0036 32.2 5.9 59 171-230 144-202 (432)
99 PRK10605 N-ethylmaleimide redu 22.4 6.9E+02 0.015 26.7 10.5 22 97-119 80-102 (362)
100 COG2894 MinD Septum formation 22.1 1E+02 0.0022 31.0 3.7 26 19-46 96-121 (272)
101 PRK05799 coproporphyrinogen II 22.0 6.8E+02 0.015 26.5 10.4 70 97-198 167-236 (374)
102 PF01136 Peptidase_U32: Peptid 21.7 1.1E+02 0.0024 30.1 4.0 39 182-226 161-199 (233)
103 cd06545 GH18_3CO4_chitinase Th 21.5 1.5E+02 0.0032 29.7 5.0 30 171-200 80-109 (253)
104 cd06542 GH18_EndoS-like Endo-b 21.2 3.4E+02 0.0074 27.0 7.5 30 172-201 86-115 (255)
105 PRK09549 mtnW 2,3-diketo-5-met 21.1 2.6E+02 0.0057 30.5 6.9 68 165-243 143-210 (407)
106 PF01373 Glyco_hydro_14: Glyco 21.0 98 0.0021 33.6 3.6 53 24-113 17-69 (402)
107 KOG3043 Predicted hydrolase re 20.5 2.9E+02 0.0062 27.9 6.4 79 21-126 52-131 (242)
108 cd08210 RLP_RrRLP Ribulose bis 20.4 2.6E+02 0.0056 30.1 6.7 46 180-229 144-189 (364)
109 COG3325 ChiA Chitinase [Carboh 20.3 2.6E+02 0.0057 30.7 6.6 69 172-242 149-224 (441)
110 PRK14833 undecaprenyl pyrophos 20.2 6.5E+02 0.014 25.3 9.1 19 98-117 37-55 (233)
111 cd02872 GH18_chitolectin_chito 20.0 2.6E+02 0.0057 29.5 6.7 30 171-200 93-122 (362)
No 1
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=4.3e-160 Score=1302.50 Aligned_cols=557 Identities=65% Similarity=1.182 Sum_probs=536.1
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHK 80 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~K 80 (561)
+|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||||||+.++++++.+....++.||.+||++|++|+|
T Consensus 194 ~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~K 273 (775)
T PLN02219 194 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAK 273 (775)
T ss_pred CccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccCccccccccccccccccccchhhhhhcccccccc
Confidence 58999999999999999999999999999999999999999999999999988766556677889999999999999999
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD 160 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~ 160 (561)
|++.+ ....+|.|||++|+.||+++|||||||||||+||||||+|+++++++|++++++|..+||..+++|+++++
T Consensus 274 F~~~~----~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d 349 (775)
T PLN02219 274 FQKND----QKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMD 349 (775)
T ss_pred ccccc----cccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCCCcccccccccccccccCCCccccCcchhhh
Confidence 98621 12367889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551 161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
.+..+|+++++|+++++||++||+||+++||||||||+|+.+++++.++++|++++++|++||++|++|||+++++|+||
T Consensus 350 ~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CM 429 (775)
T PLN02219 350 SLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARNFTDNGCISCM 429 (775)
T ss_pred hhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEec
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccChhHHHHHHHHHhcCCceEecC
Q 008551 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSD 320 (561)
Q Consensus 241 s~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Haa~raisggPlyisD 320 (561)
||+++++|+.++++++|+||||||++|++|++|+++|||||||+|+++|||||||||.||+|+|||++||||||||||||
T Consensus 430 sh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD 509 (775)
T PLN02219 430 CHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSD 509 (775)
T ss_pred ccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhccccccCchhceecCccHHHHHHHHhhcCCcEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCCcceeccccccccCC
Q 008551 321 KPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDE 400 (561)
Q Consensus 321 ~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~~w~~~~~~~~~~~~ 400 (561)
+||+||++|||+|++|||+||||+.||+|||||||.||++|++++|||||.|+++||||+|||||++||++++++.+|+.
T Consensus 510 ~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn~n~~~gviG~FNcqGagW~~~~~~~~~~~~ 589 (775)
T PLN02219 510 KPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDT 589 (775)
T ss_pred CCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEEcccccceEEEEeccCCCCCchhhccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEeeeecCCCceEeeehhh
Q 008551 401 QPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480 (561)
Q Consensus 401 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv~~~~~~~~~A~lGL~ 480 (561)
+|.++|+.|+++|++++.++++.+|+++++||+|++|+++++++++.++|+|++++|||||++||+.+..+++||||||+
T Consensus 590 ~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~ 669 (775)
T PLN02219 590 SPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLKEIATNISFAPIGLL 669 (775)
T ss_pred CCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEEEecCCcEEEEEEeeEEEecCCcEEEecchh
Confidence 99999999999999999998988999999999999999999998999999999999999999999999989999999999
Q ss_pred hhhcCccceeEEEEee---c----------------------CceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEe
Q 008551 481 KMFNSGGAIKELRYES---E----------------------GTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYE 535 (561)
Q Consensus 481 ~k~~~~aAV~~~~~~~---~----------------------~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~ 535 (561)
+|||++|||+++++.. + .+..|.|+|||||+||+|||++|++|.|||++++|+|+
T Consensus 670 ~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~ 749 (775)
T PLN02219 670 DMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYD 749 (775)
T ss_pred hcccCceeeEEeEeecccccccccccccccccccccccccCCCCceEEEEEEcccceeeEecCCCeEEEECCEEeeeEEc
Confidence 9999999999999851 0 13469999999999999999999999999999999999
Q ss_pred cCceEEEEEeccCcccceeeeEEEEC
Q 008551 536 EESGLVTLTLRVPKEELYLWNISFEL 561 (561)
Q Consensus 536 ~~~gl~~v~~~~~~~~~~~~~v~~~~ 561 (561)
+++||++|+||+|++++++|.|+|++
T Consensus 750 ~~sg~~~~~l~~~~~~~~~~~v~~~~ 775 (775)
T PLN02219 750 AEVGLLTLTLPVTEEEMYRWHVEIQV 775 (775)
T ss_pred CCCCeEEEEccCCcccCceeeEEEeC
Confidence 99999999999999999999999985
No 2
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=3e-159 Score=1299.30 Aligned_cols=561 Identities=87% Similarity=1.441 Sum_probs=539.0
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHK 80 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~K 80 (561)
+|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||||||+...+..+.++...++.||.+||++|++|+|
T Consensus 198 ~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~K 277 (758)
T PLN02355 198 MPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENHK 277 (758)
T ss_pred CCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccEEEEeccccccccccccccccccccchhhhhhcccccccc
Confidence 58999999999999999999999999999999999999999999999999876655555667788999999999999999
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD 160 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~ 160 (561)
||+.+.++...+.++.|||++|+.||+++|||||||||||+||||||+|+++++++|++++++|..+||+..++|+.+++
T Consensus 278 F~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d 357 (758)
T PLN02355 278 FQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALE 357 (758)
T ss_pred ccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecceecCcCCCCcccccccccccccccCCcccccCcchhhh
Confidence 99743333334455789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551 161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
++..+|+++++|+++++||++||+||+++||||||||+|+.+++++.++++|++++++|++||++|++|||+++++|+||
T Consensus 358 ~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~~le~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CM 437 (758)
T PLN02355 358 SITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCM 437 (758)
T ss_pred hcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEec
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccChhHHHHHHHHHhcCCceEecC
Q 008551 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSD 320 (561)
Q Consensus 241 s~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Haa~raisggPlyisD 320 (561)
||+++++|++++++++|+||||||++|++|++|+++|||||||+|+++|||||||||.||+|+|||++||||||||||||
T Consensus 438 s~~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMF~S~hp~A~~HAaaRAisGGPIYvSD 517 (758)
T PLN02355 438 SHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSD 517 (758)
T ss_pred ccCchhhcccccceeeeeccccccCCCccCchhhhhhhhhhhhhccccccCcccceecCccHHHHHHHHhccCCcEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCCcceeccccccccCC
Q 008551 321 KPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDE 400 (561)
Q Consensus 321 ~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~~w~~~~~~~~~~~~ 400 (561)
+||+||++|||+|++|||+||||+.||+|||||||.||++|++++|||||+|+++|+||+|||||++||+++++|++|++
T Consensus 518 ~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~~dg~slLKIwn~nk~sGviG~FNcqGagw~~~~~~~~~~~~ 597 (758)
T PLN02355 518 KPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNEFTGVIGVFNCQGAGWCRVGKKNLIHDE 597 (758)
T ss_pred CCCCccHHHHHhhhCCCCceeccccCCCcchhhhccccccCCceEEEEEEcCCcccEEEEEeccCCcccchhccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEeeeecCCCceEeeehhh
Q 008551 401 QPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480 (561)
Q Consensus 401 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv~~~~~~~~~A~lGL~ 480 (561)
++.++++.++++|++.+.++++++|+++++||+|++|++.++++++.++|+|++++|||||++||+.+.++++||||||+
T Consensus 598 ~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l~~~~~~~~~~vtL~~~~~eiftv~Pi~~~~~~~~fApIGL~ 677 (758)
T PLN02355 598 QPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYLPKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLV 677 (758)
T ss_pred CCceeEEEEccccccchhhccccCCCCCeEEEEecCceEEecCCCCceEEEecCCceEEEEEeeEEEecCCcEEEEeehh
Confidence 99999999999999999888888899999999999999999988999999999999999999999999988999999999
Q ss_pred hhhcCccceeEEEEeecCceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEecCceEEEEEeccCcccceeeeEEEE
Q 008551 481 KMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFE 560 (561)
Q Consensus 481 ~k~~~~aAV~~~~~~~~~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~v~~~~~~~~~~~~~v~~~ 560 (561)
||||++|||+++++...++.+++|+|||+|+||+|+|.+|++|.|||++++|+|++++|+++|+||++++++++|.|+|+
T Consensus 678 ~m~nsggAV~~~~~~~~~~~~v~v~vkg~G~~g~YsS~~P~~c~vd~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~~~~ 757 (758)
T PLN02355 678 KMFNSGGAIKELRYDEDTNATVRMKVRGSGLVGAYSSSRPRRVTVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTVE 757 (758)
T ss_pred hhccCcceEEEEEeecccccEEEEEEEecceEEEEecCCCcEEEECCeEeeeEEcCCCCeEEEEcCCCcccCceeEEEEe
Confidence 99999999999999776667899999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 008551 561 L 561 (561)
Q Consensus 561 ~ 561 (561)
|
T Consensus 758 ~ 758 (758)
T PLN02355 758 L 758 (758)
T ss_pred C
Confidence 6
No 3
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=7e-158 Score=1284.59 Aligned_cols=552 Identities=62% Similarity=1.101 Sum_probs=528.4
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHK 80 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~K 80 (561)
+|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||||||+..+++.+.+.. ..+.||.+||++|++|+|
T Consensus 197 ~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDDGwQs~~~d~~~~~~~-~~~~q~~~rL~~f~en~K 275 (750)
T PLN02684 197 LPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQSVGGDPTVEAGD-EKKEQPLLRLTGIKENEK 275 (750)
T ss_pred CccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEecccccccccccccccc-cccchhhhhhccCccccc
Confidence 5899999999999999999999999999999999999999999999999998775433322 334789999999999999
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD 160 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~ 160 (561)
||+. ..++.|||++++.||+++|||||||||||+||||||+|+++++++|++++.+|..+||...++|+++++
T Consensus 276 F~~~-------~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d 348 (750)
T PLN02684 276 FKKK-------DDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTD 348 (750)
T ss_pred cccc-------cCCCccHHHHHHHHHhhcCCcEEEEEeeecccccccCCCCcchhhccccccccccCccccccCcccccc
Confidence 9961 123479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551 161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
.+..+|+|+++|+++++||++||+||+++||||||||+|+.+++++.+++++++++++|++||++|++|||+++++|+||
T Consensus 349 ~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CM 428 (750)
T PLN02684 349 VMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACM 428 (750)
T ss_pred ccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhhcccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEec
Confidence 99889999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cCCCCCCccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccChhHHHHHHHHHhcCCceEecC
Q 008551 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSD 320 (561)
Q Consensus 241 s~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Haa~raisggPlyisD 320 (561)
||+++++|++++++++|+||||||++|++|++|+++|||||||+|+++|||||||||.|++++|||++||||||||||||
T Consensus 429 s~~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMFqS~hp~A~~HAaaRAisGGPIYvSD 508 (750)
T PLN02684 429 SHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMQPDWDMFHSLHPAAEYHASARAISGGPLYVSD 508 (750)
T ss_pred ccCchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhhhccccccCcccceecCccHHHHHHHHhhcCCceEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCCcceeccccccccCC
Q 008551 321 KPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDE 400 (561)
Q Consensus 321 ~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~~w~~~~~~~~~~~~ 400 (561)
+||+||++|||+|++|||+||||+.||+|||||||.||++|++++|||||+|+++||||+|||||++||++.+++.+|+.
T Consensus 509 ~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~slLKIwn~n~~tGViG~FNcqGagw~~~~~~~~~~~~ 588 (750)
T PLN02684 509 APGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQT 588 (750)
T ss_pred CCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCccEEEEEEecCCCceEEEEeccCCccCccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeeeeccCCCCccccCCC-CCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEeeeecCCCceEeeehh
Q 008551 401 QPGTTTGFIRAKDVDYLPRVAGD-EWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGL 479 (561)
Q Consensus 401 ~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv~~~~~~~~~A~lGL 479 (561)
++.++++.++++|++++.++++. +|+++++||+|++|+++++++++.++|+|++++|||||++||+.+.++++||||||
T Consensus 589 ~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~~~~~~vtL~~~~~Ei~t~~Pv~~~~~~~~fApiGL 668 (750)
T PLN02684 589 KTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNASLPVSLKVLEHEIFTVTPIKHLAPGFSFAPLGL 668 (750)
T ss_pred CCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCCCCceEEEecCCcEEEEEEeeEEEecCCcEEEecch
Confidence 99999999999999999999886 49999999999999999999899999999999999999999999998999999999
Q ss_pred hhhhcCccceeEEEEeecCceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEecCceEEEEEeccCcccce-eeeEE
Q 008551 480 VKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELY-LWNIS 558 (561)
Q Consensus 480 ~~k~~~~aAV~~~~~~~~~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~v~~~~~~~~~~-~~~v~ 558 (561)
++|||++|||+++++... +++++|+|||||+||+|+|.+|++|.|||++++|+|++++|+++|+||+|+++++ +|.|+
T Consensus 669 ~~m~n~ggAi~~~~~~~~-~~~v~v~vkg~G~~g~YsS~~P~~c~v~~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~v~ 747 (750)
T PLN02684 669 INMYNAGGAIEGLKYEVK-KGKVVMEVKGCGKFGAYSSVKPRRCVVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVE 747 (750)
T ss_pred hhcccCcceEEEEEEecc-cceEEEEEEecceeEEEEcCCCcEEEECCEEEeeEEcCCCCeEEEEcCCCccccCcceEEE
Confidence 999999999999998764 4569999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEC
Q 008551 559 FEL 561 (561)
Q Consensus 559 ~~~ 561 (561)
|++
T Consensus 748 ~~~ 750 (750)
T PLN02684 748 VEL 750 (750)
T ss_pred EeC
Confidence 974
No 4
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=6.8e-154 Score=1249.59 Aligned_cols=557 Identities=40% Similarity=0.750 Sum_probs=523.1
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCC----CcccccccccccccccCcc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSG----FEFRADNTANFANRLTHIK 76 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~----~~~~~~~~~~~~~~l~~~~ 76 (561)
+|+++|+||||||||||++|++++|++++++|.++|+|+++||||||||+...+.++ .+....++.||..||+.|+
T Consensus 217 ~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprfvIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~ 296 (865)
T PLN02982 217 LPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRFLIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFD 296 (865)
T ss_pred CccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccEEEEecchhhccccccCCchhhhhccccccchhhhhhcch
Confidence 699999999999999999999999999999999999999999999999999876332 2346678999999999999
Q ss_pred cCcccCCCCC-CCC------------------------------------------------------------------
Q 008551 77 ENHKFQKNGK-EGQ------------------------------------------------------------------ 89 (561)
Q Consensus 77 ~~~KFP~~~~-~~~------------------------------------------------------------------ 89 (561)
+|+||++..+ ...
T Consensus 297 En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 376 (865)
T PLN02982 297 ECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEKARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVS 376 (865)
T ss_pred hhhhhhccccccccCCCcccccccccchhhhcccchhhhhhcccccccccccccchhhhhhhhhhhhccccccccccccc
Confidence 9999998211 110
Q ss_pred -------CCCCCccCHHHHHHHHHHhc-CCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccc
Q 008551 90 -------REEDPALGLRHIVTEIKEKH-DLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDS 161 (561)
Q Consensus 90 -------~~~~~~~Glk~lv~~i~~~~-Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~ 161 (561)
+++..+.|||++|+.||+|| |||||||||||+||||||+|++ ++|++++++|+.+||..+++||+++|+
T Consensus 377 ~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~GYWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~ 453 (865)
T PLN02982 377 SESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCGAWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDK 453 (865)
T ss_pred cccccccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccCcccCcCCCC---CCCcceEEecccCccccccCcchhhhh
Confidence 12455679999999999999 5999999999999999999986 579999999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 008551 162 IAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMS 241 (561)
Q Consensus 162 ~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms 241 (561)
+..+|+|+++|+++++||++||+||+++|||+||||+|+.++++++++++|++++++|++||++++++||+++++|+|||
T Consensus 454 i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~ 533 (865)
T PLN02982 454 IVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQ 533 (865)
T ss_pred eecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecc
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred CCCCCCc-cccccCeEeecCCCCCCCccchhH--------HHHHHhhhhhhhcCCCCCCCccCcccChhHHHHHHHHHhc
Q 008551 242 HNTDGLY-SAKRSAVIRASDDFWPRDPASHTI--------HIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVG 312 (561)
Q Consensus 242 ~~~~~l~-~~~~~~~~R~SdDf~p~~~~~~~~--------hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Haa~rais 312 (561)
|+++++| +++++.+.|+||||||++|++|+| |+++||||+||||+++|||||||||.|++++|||++||||
T Consensus 534 ~~~~~~~~~tk~sav~R~SDDF~p~dP~shp~g~~wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIs 613 (865)
T PLN02982 534 QCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGVYWLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAIC 613 (865)
T ss_pred cCchhhhccCCcceeeeccccccCCCCCcCccccccccceeeeehhhhhHhhccccccCchhccccCchHHHHHHHHhhc
Confidence 9999887 578899999999999999999884 9999999999999999999999999999999999999999
Q ss_pred CCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCCcceecc
Q 008551 313 GCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVG 392 (561)
Q Consensus 313 ggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~~w~~~~ 392 (561)
||||||||+||+||++||++|++|||+||||++||+|||||||.||++|++++|||||+|+.+||||+|||||++|||++
T Consensus 614 GGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~pg~PTrDcLF~DPl~DGks~LKIWN~Nk~~GViG~FNCQGagW~~~~ 693 (865)
T PLN02982 614 GGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHYALPTRDCLFKNPLFDKKTILKIWNFNKFGGVIGAFNCQGAGWDPKE 693 (865)
T ss_pred CCCEEEeeCCCCccHHHHHhhhcCCCceeccCCCCCCCcchhccCcccCCceEEEEEeccCcCceEEEEEeccCCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceEeeeeccCCCCcc--ccCCCCCCCcEEEEEecCCeEEecCC-CCeeeEEecCCceEEEEEEeeeecC
Q 008551 393 KKNLIHDEQPGTTTGFIRAKDVDYLP--RVAGDEWTGDAIAYSHLGGEVAYLPK-NATLPITLKSREYEVYTVVPVKELS 469 (561)
Q Consensus 393 ~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~vv~~~~~g~~~~l~~-~~~~~v~L~~~~~ei~~~~Pv~~~~ 469 (561)
+++.+|++++.++++.|+++|+++.. +.++..|+++++||+++++++.++.+ ++.++|+|++.+|||||++||+.+.
T Consensus 694 ~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~ 773 (865)
T PLN02982 694 HRIKGYSECYKPVSGSVHVSDIEWDQKPEASQMGEAEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLG 773 (865)
T ss_pred ccccccCCCCcceEEEEcHHHcccccccccccCCCcccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEcc
Confidence 99999999999999999999999885 44556789999999999999998654 7899999999999999999999998
Q ss_pred CCceEeeehhhhhhcCccceeEEEEeec-CceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEecCceEEEEEeccC
Q 008551 470 SGTRFAPIGLVKMFNSGGAIKELRYESE-GTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVP 548 (561)
Q Consensus 470 ~~~~~A~lGL~~k~~~~aAV~~~~~~~~-~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~v~~~~~ 548 (561)
++++||||||+||||+||||+++++..+ .+.+++|+|||+|+|++|+|.+|++|.|||++++|+|+++ |+|+|+||++
T Consensus 774 ~~i~FApIGL~nM~NSgGAV~~~~~~~~g~~~~v~v~VrG~G~f~~Yss~~P~~c~vdg~ev~F~y~~~-g~l~~~lp~~ 852 (865)
T PLN02982 774 SSAKFAPIGLTNMFNSGGTIQEMEYGESGGECSVKVKVKGGGRFLAYSSEAPKKCYLNGKEVGFEWEEE-GKLSFFVPWT 852 (865)
T ss_pred CCcceeeeehHhhccCCceeEEeeeccCCccceEEEEEEecceEEEEecCCCeEEEECCeEeeeEECCC-CeEEEEccCC
Confidence 8999999999999999999999998643 4457999999999999999999999999999999999996 9999999999
Q ss_pred cccceeeeEEEEC
Q 008551 549 KEELYLWNISFEL 561 (561)
Q Consensus 549 ~~~~~~~~v~~~~ 561 (561)
++++++|.|+|+|
T Consensus 853 ~~~~~~~~v~~~~ 865 (865)
T PLN02982 853 EESGGISDVSFIF 865 (865)
T ss_pred cccCceeeEEEeC
Confidence 9999999999987
No 5
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.3e-152 Score=1244.01 Aligned_cols=552 Identities=43% Similarity=0.789 Sum_probs=514.5
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCC-----CcccccccccccccccCc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSG-----FEFRADNTANFANRLTHI 75 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 75 (561)
+|+++|+||||||||||++|||++|++++++|+++|+|+++||||||||+.+++.+. .+....++.||.+||++|
T Consensus 208 ~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f 287 (777)
T PLN02711 208 PPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKF 287 (777)
T ss_pred CCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEcCCcccccccCcccccccccccccccchhhhhhccc
Confidence 599999999999999999999999999999999999999999999999998765322 235567789999999999
Q ss_pred ccCcccCCCCCCCCCCCCCccCHHHHHHHHHHhcC-CcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCC
Q 008551 76 KENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHD-LKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNE 154 (561)
Q Consensus 76 ~~~~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~G-lk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~ 154 (561)
++|.||++.++ .+..++.|||++++.||++++ ||||||||||+||||||+|++++++ +.++++|+.+||...++
T Consensus 288 ~en~KF~~~~~---~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHAL~GYWGGv~P~~~~~~--~~~~~~p~~spg~~~~~ 362 (777)
T PLN02711 288 EENYKFRDYVS---PKSLSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLP--ESKVVAPKLSPGLKMTM 362 (777)
T ss_pred ccccccccccc---ccCCCCCcHHHHHHHHHhhCCCCCEEEEeeeccCcccCcCCCCCCCc--cceeeccccCccccccc
Confidence 99999997422 235688999999999999985 9999999999999999999987765 56678899999999999
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCC
Q 008551 155 PCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNN 234 (561)
Q Consensus 155 pd~~~~~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~ 234 (561)
|++++|++..+|+++++|+++++||++||+||+++||||||||+|+.++++++++++|++++++|++||++|++|||+++
T Consensus 363 ~d~~~d~~~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKVDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~n 442 (777)
T PLN02711 363 EDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGN 442 (777)
T ss_pred ccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred ceEeeccCCCCCCcc-ccccCeEeecCCCCCCCccchh--------HHHHHHhhhhhhhcCCCCCCCccCcccChhHHHH
Q 008551 235 DIICCMSHNTDGLYS-AKRSAVIRASDDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYH 305 (561)
Q Consensus 235 ~ii~cms~~~~~l~~-~~~~~~~R~SdDf~p~~~~~~~--------~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~H 305 (561)
++|+||||+++++|+ ++++++.|+||||||++|++|+ .|+++|||||||+|+++|||||||||.||+|+||
T Consensus 443 g~I~CMs~~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~W~~~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~H 522 (777)
T PLN02711 443 GVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFH 522 (777)
T ss_pred CeEeecccCchhhhccCcccceeeecccccCCCCccccccccccccceeeeehhhhhhhcccccCCchhhhccCchHHHH
Confidence 999999999998875 6789999999999999999998 4999999999999999999999999999999999
Q ss_pred HHHHHhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecC
Q 008551 306 GAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQG 385 (561)
Q Consensus 306 aa~raisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~ 385 (561)
|++||||||||||||+||+||++|||+|++|||+||||++||+|||||||.||++|++++|||||+|+++||||+|||||
T Consensus 523 AaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~pg~PtrDcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqg 602 (777)
T PLN02711 523 AASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYALPTRDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQG 602 (777)
T ss_pred HHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCCCCccchhhccccccCCceEEEEEeecCCcceEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeccccccccCCCCCceEeeeeccCCCCccccCCCC--CCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEE
Q 008551 386 AGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDE--WTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVV 463 (561)
Q Consensus 386 ~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~ 463 (561)
++||+++++|++|+++++++|+.|+++|+++..+.++.. -.+.|+||+|++|++.++++++.++|+|++.+|||||++
T Consensus 603 agW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~ 682 (777)
T PLN02711 603 GGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFELITVS 682 (777)
T ss_pred CcccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCccCceeEEEEEecCCeEEECCCCCceEEEecCcceEEEEEe
Confidence 999999999999999999999999999998654432221 256899999999999999989999999999999999999
Q ss_pred eeeecCC-CceEeeehhhhhhcCccceeEEEEeecCceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEecCceEEE
Q 008551 464 PVKELSS-GTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVT 542 (561)
Q Consensus 464 Pv~~~~~-~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~ 542 (561)
||+.+.+ +++||||||++|||++|||+++++... +.+++|+|||+|+||+|+|++|++|.|||++++|+|++ ||+|
T Consensus 683 Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~~-~~~v~v~vkg~G~lg~YsS~~P~~c~v~~~~~~f~y~~--g~~~ 759 (777)
T PLN02711 683 PVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDDA-ESSVQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYED--CMVV 759 (777)
T ss_pred eeEEecCCCceEEecchhhhccCceeEEEEEeccC-CCeEEEEEEeeeEEEEEecCCCeEEEECCEEeeeEecC--CEEE
Confidence 9999875 489999999999999999999998743 24789999999999999999999999999999999998 9999
Q ss_pred EEeccCcccceeeeEEEEC
Q 008551 543 LTLRVPKEELYLWNISFEL 561 (561)
Q Consensus 543 v~~~~~~~~~~~~~v~~~~ 561 (561)
|+||+++++ ++|.|||+|
T Consensus 760 ~~~~~~~~~-~~~~v~~~~ 777 (777)
T PLN02711 760 VQVPWSGSS-GLSLIEYLF 777 (777)
T ss_pred EEecCCCcC-CceeEEEeC
Confidence 999999966 999999987
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=4.3e-149 Score=1228.04 Aligned_cols=540 Identities=62% Similarity=1.113 Sum_probs=513.2
Q ss_pred CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCC----CcccccccccccccccCcc
Q 008551 1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSG----FEFRADNTANFANRLTHIK 76 (561)
Q Consensus 1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~----~~~~~~~~~~~~~~l~~~~ 76 (561)
+|+++|+|||||||+||++|||++|++++++|+++|+|+++||||||||+.++++++ ....+.++.||.+||.+|+
T Consensus 190 ~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~ 269 (747)
T PF05691_consen 190 YPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDDGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFK 269 (747)
T ss_pred hhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEecchhcccccCcccccccccccccccccchhhhhhh
Confidence 589999999999999999999999999999999999999999999999999887653 2456678899999999999
Q ss_pred cCcccCCCCCCCCCCCCCccCHHHHHHHHHHhc-CCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCC
Q 008551 77 ENHKFQKNGKEGQREEDPALGLRHIVTEIKEKH-DLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEP 155 (561)
Q Consensus 77 ~~~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~-Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~p 155 (561)
+|+||.+... +..+++++.|||++|++||++| |||||||||||+||||||+|++. ..|+.+++++..+||...++|
T Consensus 270 en~kF~~~~~-~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~GYWgGi~P~~~--~~~~~k~~~~~~spg~~~~~~ 346 (747)
T PF05691_consen 270 ENSKFRAYKS-GKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCGYWGGISPDGM--LAYNYKLVYPKLSPGLQGNMP 346 (747)
T ss_pred hhhhhhhccC-CCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcceecCcCCCCc--cccccceeecccCCcccccCc
Confidence 9999997432 2234578899999999999999 89999999999999999999754 468888889999999999999
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCc
Q 008551 156 CDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNND 235 (561)
Q Consensus 156 d~~~~~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ 235 (561)
+++++++..+|+++++|+++++||++||+||+++||||||||+|+.+++++.+++++++++++|++||++|+++||++++
T Consensus 347 d~~~d~~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~ 426 (747)
T PF05691_consen 347 DLAVDSIVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAILETLGEGYGGRVELARAYQDALEASVARHFSGNG 426 (747)
T ss_pred cccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhhhhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred eEeeccCCCCCCcc-ccccCeEeecCCCCCCCccc--------hhHHHHHHhhhhhhhcCCCCCCCccCcccChhHHHHH
Q 008551 236 IICCMSHNTDGLYS-AKRSAVIRASDDFWPRDPAS--------HTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHG 306 (561)
Q Consensus 236 ii~cms~~~~~l~~-~~~~~~~R~SdDf~p~~~~~--------~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Ha 306 (561)
+|+||||+++++|+ .+..+++|+||||||++|++ |++|+++||||+||+++++|||||||||.|+++++||
T Consensus 427 vI~CMsh~~~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h~~Hi~~nAyNsL~~g~~~~PDwDMF~S~h~~A~~HA 506 (747)
T PF05691_consen 427 VINCMSHNPDNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLHTWHIAHNAYNSLLLGQFVWPDWDMFQSSHPAAEFHA 506 (747)
T ss_pred eEEecCCCccchhcccccccceeccccccCCCCCCCccccchhhHHHHHHHHHHHHHHHhhcCCCcccccccCccHHHHH
Confidence 99999999999999 78899999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCC
Q 008551 307 AARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGA 386 (561)
Q Consensus 307 a~raisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~ 386 (561)
++||||||||||||+||+||++|||+|++|||+||||++||+||+||||.||++|++++|||||+|+.+||||+|||||+
T Consensus 507 aaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt~d~Lf~dp~~d~~~lLKi~n~n~~~gvig~FN~qga 586 (747)
T PF05691_consen 507 AARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPTRDCLFEDPLRDGKSLLKIWNLNKFTGVIGVFNCQGA 586 (747)
T ss_pred HHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCChhhhcccCCCCCceeEEEEecCCccceEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeccccccccCCCCCceEeeeeccCCCCccccCC--CCCCCcEEEEEecCCeEEecC-CCCeeeEEecCCceEEEEEE
Q 008551 387 GWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAG--DEWTGDAIAYSHLGGEVAYLP-KNATLPITLKSREYEVYTVV 463 (561)
Q Consensus 387 ~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~~vv~~~~~g~~~~l~-~~~~~~v~L~~~~~ei~~~~ 463 (561)
+||++++++.+|+++|+++++.++++|++++.+.++ .+|.++++||+|+++++.+++ ++++++|+|++++|||||++
T Consensus 587 gw~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~avY~~~~~~l~~l~~k~~~~~vtL~~~~~El~tv~ 666 (747)
T PF05691_consen 587 GWCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNGDFAVYSHRSGELVLLPPKSESLPVTLKPLEFELFTVS 666 (747)
T ss_pred cccchhhhccccCCCCcceEeeccccccceeccccccCcCCCccEEEEEcCCCeEEEecCCCCCceEEEcCcceEEEEEe
Confidence 999999999999999999999999999999988887 568999999999999999999 59999999999999999999
Q ss_pred eeeecCC-CceEeeehhhhhhcCccceeEEEEeecCceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEecCceEEE
Q 008551 464 PVKELSS-GTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVT 542 (561)
Q Consensus 464 Pv~~~~~-~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~ 542 (561)
||+.+.+ +++||||||+||||+||||+++++..+ +..|+|+|||||+||+|||++|++|.|||++++|+|+++ ||||
T Consensus 667 Pv~~~~~~~v~FAPIGL~nMfNsGGAV~~~~~~~~-~~~v~i~vrG~G~f~aYsS~~P~~c~vdg~ev~F~yd~~-gllt 744 (747)
T PF05691_consen 667 PVKVLGGKGVSFAPIGLVNMFNSGGAVQELEYDDD-EASVKIKVRGCGRFGAYSSARPKKCRVDGAEVEFSYDED-GLLT 744 (747)
T ss_pred eEEEecCCCeeEehhhHHHhhcCCceeEEEEEecC-ccEEEEEEEeccceeEEEecCceEEEECCEEeeEEEcCC-ceEE
Confidence 9999887 899999999999999999999999864 568999999999999999999999999999999999997 9999
Q ss_pred EEe
Q 008551 543 LTL 545 (561)
Q Consensus 543 v~~ 545 (561)
|+|
T Consensus 745 ~~v 747 (747)
T PF05691_consen 745 VDV 747 (747)
T ss_pred EeC
Confidence 985
No 7
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=4.9e-47 Score=400.11 Aligned_cols=345 Identities=17% Similarity=0.204 Sum_probs=245.3
Q ss_pred CCCccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cc
Q 008551 5 LNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HK 80 (561)
Q Consensus 5 ~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~K 80 (561)
..+|||||||+|+++|||++|++.+++|.+.|+. ++||+||||||...++.. +++.+| +|
T Consensus 62 tPpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~----------------G~l~~d~~r 125 (427)
T PLN02229 62 TPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSK----------------GQLVPDPKT 125 (427)
T ss_pred CCCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCC----------------CCEEEChhh
Confidence 4679999999999999999999999997655555 469999999998766532 334576 58
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD 160 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~ 160 (561)
||+ |||+++++||+ .||| +|+|.. . |+. .|. ..||+.+++
T Consensus 126 FP~-------------G~k~ladyiH~-~GlK-fGIy~d-~----G~~---------TC~-----~~pGS~g~e------ 165 (427)
T PLN02229 126 FPS-------------GIKLLADYVHS-KGLK-LGIYSD-A----GVF---------TCQ-----VRPGSLFHE------ 165 (427)
T ss_pred cCC-------------cHHHHHHHHHH-CCCc-eEEecc-C----CCc---------ccC-----CCCCCccHH------
Confidence 996 99999999999 6999 677633 1 221 221 224543322
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551 161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
..||+.| |+|||||||+|+|+... . ...+...++++||.++ ||+|++|+
T Consensus 166 -----------~~DA~~f--------A~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~t------GRpI~~Sl 214 (427)
T PLN02229 166 -----------VDDADIF--------ASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNAT------GRSIFYSL 214 (427)
T ss_pred -----------HHHHHHH--------HHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHhh------CCCcEEEe
Confidence 3566665 99999999999997411 1 1123344566666554 89999999
Q ss_pred cCCCCC---CccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccC-----hhHHHHHHHHHhc
Q 008551 241 SHNTDG---LYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH-----PMAEYHGAARAVG 312 (561)
Q Consensus 241 s~~~~~---l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~-----~~a~~Haa~rais 312 (561)
|+++.. .|..+.+|+||+|+|+++.|.+..+... .+...+.+.++++|||+||+..++ .+.++|+++|||+
T Consensus 215 C~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~~-~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~ 293 (427)
T PLN02229 215 CEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTIAD-LNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALM 293 (427)
T ss_pred cCCCCCCHHHHHHhhcCeeeccCCcccccccHHHHHH-HHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHH
Confidence 998642 3556789999999999999987654332 233344578999999999999886 5789999999999
Q ss_pred CCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCC--CCCCccccccCCCCCCcceEEEEeec--CCceeEEEEeecCCcc
Q 008551 313 GCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLP--GRPTRDCLFSDPARDGKSLLKIWNLN--DFTGVVGVFNCQGAGW 388 (561)
Q Consensus 313 ggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~--g~p~~d~lf~d~~~~~~~~lkv~~~~--~~~~vvg~FN~~~~~w 388 (561)
++||+++....+.+-+.++ ++.+.+||+.+|. |.+.+- ++.+. .++ -+.||... .++.+|++||.+...
T Consensus 294 ~SPLiiG~DL~~m~~~tl~--ILtNkEVIAINQD~lG~qg~~-v~~~~-~~~--~~~vW~~~L~~g~~aValfN~~~~~- 366 (427)
T PLN02229 294 KAPLLIGCDVRNMTAETME--ILSNKEVIAVNQDPLGVQGRK-IQANG-KNG--CQQVWAGPLSGDRLVVALWNRCSEP- 366 (427)
T ss_pred hCceeecCCcccCCHHHHH--HhcCHHHHhhcccccccCcEE-EEecC-CCC--ceEEEEEECCCCCEEEEEEeCCCCC-
Confidence 9999999666555544444 3566668888777 444432 22211 112 36788764 445689999976531
Q ss_pred eeccccccccCCCCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEeeee
Q 008551 389 CRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKE 467 (561)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv~~ 467 (561)
.+.++.+++++ +.. ...|-|++.++++-.-......++++|++|++-+|.+.|+..
T Consensus 367 ----------------~~v~v~~~~lG-l~~------~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~~~~ 422 (427)
T PLN02229 367 ----------------ATITASWDVIG-LES------SISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQTV 422 (427)
T ss_pred ----------------EEEEEEHHHcC-CCC------CCceEEEECCCCCccCccccceEEEEECCCeEEEEEEecccc
Confidence 33346677775 210 235889999999862111256889999999999999999764
No 8
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=1.2e-46 Score=395.52 Aligned_cols=341 Identities=16% Similarity=0.205 Sum_probs=247.0
Q ss_pred CCCccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-Ccc
Q 008551 5 LNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHK 80 (561)
Q Consensus 5 ~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~K 80 (561)
..+|||||||+|+++|||++|++.+++|.+.|+. ++||+||||||...++..+ + |.+ ++|
T Consensus 55 tPpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G-------------~---~~~d~~k 118 (412)
T PLN02692 55 TPPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKG-------------N---LVPKKST 118 (412)
T ss_pred CCcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCC-------------C---eeeChhh
Confidence 4679999999999999999999999998887776 5799999999988766432 3 345 569
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD 160 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~ 160 (561)
||+ |||+++++||+ .||| +|+|.. . |. +.|.. ..|
T Consensus 119 FP~-------------G~k~ladyiH~-~GLK-fGIy~d-~----G~---------~tC~~----~~p------------ 153 (412)
T PLN02692 119 FPS-------------GIKALADYVHS-KGLK-LGIYSD-A----GY---------FTCSK----TMP------------ 153 (412)
T ss_pred cCC-------------cHHHHHHHHHH-CCCc-eEEEec-C----Cc---------cccCC----CCC------------
Confidence 996 99999999999 6999 687643 1 11 12210 012
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551 161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
+.+.||+...+++|+|||||||+|+|+.- +. ...+..+++++||.++ ||+|++|+
T Consensus 154 -------------GS~g~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~~~~~y~~m~~AL~~t------GRpI~~Sl 208 (412)
T PLN02692 154 -------------GSLGHEEQDAKTFASWGIDYLKYDNCNND-----GS-KPTVRYPVMTRALMKA------GRPIFFSL 208 (412)
T ss_pred -------------CchHHHHHHHHHHHhcCCCEEeccccCCC-----Cc-chhHHHHHHHHHHHHh------CCCeEEEe
Confidence 33567777777789999999999999731 11 1112344455555544 89999999
Q ss_pred cCCCCC---CccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccC-----hhHHHHHHHHHhc
Q 008551 241 SHNTDG---LYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH-----PMAEYHGAARAVG 312 (561)
Q Consensus 241 s~~~~~---l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~-----~~a~~Haa~rais 312 (561)
|+++.. .|..+.+|+||+|+|+++.|....... -.+...+.++++++|||+||+..++ .+.++|+++|||+
T Consensus 209 C~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~-~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWai~ 287 (412)
T PLN02692 209 CEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRA-DMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAIS 287 (412)
T ss_pred cCCCcCChhhhhhhcCCccccccccccchHhHHHHH-HHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHHHH
Confidence 998742 356678999999999999998755543 2334445578999999999999886 4779999999999
Q ss_pred CCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCC--CCCCccccccCCCCCCcceEEEEeec--CCceeEEEEeecCCcc
Q 008551 313 GCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLP--GRPTRDCLFSDPARDGKSLLKIWNLN--DFTGVVGVFNCQGAGW 388 (561)
Q Consensus 313 ggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~--g~p~~d~lf~d~~~~~~~~lkv~~~~--~~~~vvg~FN~~~~~w 388 (561)
++||+++..+.+.+-+.|+- +.+.+||+.+|. |.+.+. + ..++. +.||... .+..+|++||.++..
T Consensus 288 ~SPLiiG~DL~~~~~~~l~i--LtN~evIAiNQD~lG~q~~~-v----~~~~~--~~vW~k~l~~g~~aVal~N~~~~~- 357 (412)
T PLN02692 288 KAPLLLGCDVRNMTKETMDI--VANKEVIAVNQDPLGVQAKK-V----RMEGD--LEIWAGPLSGYRVALLLLNRGPWR- 357 (412)
T ss_pred hCcceecCCcccCCHHHHHH--hcCHHHhhhccCccccCcEE-E----EecCC--eEEEEEECCCCCEEEEEEECCCCC-
Confidence 99999996665555444332 455568888777 555432 1 12333 7788874 455689999976532
Q ss_pred eeccccccccCCCCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEee
Q 008551 389 CRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPV 465 (561)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv 465 (561)
.+.++..++++. .. ...+.|++.++++..-......++++|++|++-+|.+.|.
T Consensus 358 ----------------~~i~~~~~~lgl-~~------~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~~ 411 (412)
T PLN02692 358 ----------------NSITANWDDIGI-PA------NSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPI 411 (412)
T ss_pred ----------------EEEEEeHHHhCC-CC------CCceEEEECCCCCccCccccceEEEEECCceEEEEEEecC
Confidence 334466677652 10 2358899999998632223578899999999999999885
No 9
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=1.1e-45 Score=387.68 Aligned_cols=340 Identities=17% Similarity=0.221 Sum_probs=242.2
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-c
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-H 79 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 79 (561)
...+|||||||+|+++|||++|++.+++|++.|+. ++||+||||||...++.. +++.++ +
T Consensus 30 ~tPpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~----------------G~~~~d~~ 93 (386)
T PLN02808 30 LTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ----------------GNLVPKAS 93 (386)
T ss_pred CCCcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC----------------CCEeeChh
Confidence 35679999999999999999999999998877777 679999999998766543 233465 5
Q ss_pred ccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccc
Q 008551 80 KFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAF 159 (561)
Q Consensus 80 KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~ 159 (561)
|||+ |||+++++||+ .||| +|+|... | ..++.. ..||
T Consensus 94 rFP~-------------G~~~lad~iH~-~Glk-fGiy~~~-----G----------~~tC~~---~~pG---------- 130 (386)
T PLN02808 94 TFPS-------------GIKALADYVHS-KGLK-LGIYSDA-----G----------TLTCSK---TMPG---------- 130 (386)
T ss_pred hcCc-------------cHHHHHHHHHH-CCCc-eEEEecC-----C----------ccccCC---CCCc----------
Confidence 9996 99999999999 6999 6877431 1 112210 0123
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEee
Q 008551 160 DSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICC 239 (561)
Q Consensus 160 ~~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~c 239 (561)
.+.||+...+++|+|||||||+|+|+.- +. ...+...++.+||.++ ||+|++|
T Consensus 131 ---------------s~~~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~~~~~y~~m~~AL~~t------GRpi~~s 183 (386)
T PLN02808 131 ---------------SLGHEEQDAKTFASWGIDYLKYDNCENT-----GT-SPQERYPKMSKALLNS------GRPIFFS 183 (386)
T ss_pred ---------------chHHHHHHHHHHHHhCCCEEeecCcCCC-----Cc-cHHHHHHHHHHHHHHh------CCCeEEE
Confidence 3456666666779999999999999731 11 1123344455555443 8999999
Q ss_pred ccCCCC-CC--ccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccC-----hhHHHHHHHHHh
Q 008551 240 MSHNTD-GL--YSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH-----PMAEYHGAARAV 311 (561)
Q Consensus 240 ms~~~~-~l--~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~-----~~a~~Haa~rai 311 (561)
+|+++. .. |..+.+|+||+|+|+++.|....+.. -.++..+.+++++.|||+||+..++ .+.++|+++|||
T Consensus 184 lc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~-~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWam 262 (386)
T PLN02808 184 LCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRA-DQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWAL 262 (386)
T ss_pred ecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHHH-HhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHHH
Confidence 999762 22 55678999999999999998755533 2333445578899999999999886 578999999999
Q ss_pred cCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCC--CCCCccccccCCCCCCcceEEEEeec--CCceeEEEEeecCCc
Q 008551 312 GGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLP--GRPTRDCLFSDPARDGKSLLKIWNLN--DFTGVVGVFNCQGAG 387 (561)
Q Consensus 312 sggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~--g~p~~d~lf~d~~~~~~~~lkv~~~~--~~~~vvg~FN~~~~~ 387 (561)
+++||.||+.+.+.+-+.|.- +.+.++|+.+|- |.+.+- ++ .++. ..||... .+...|++||.++.
T Consensus 263 ~~SPLiiG~DL~~~~~~~l~i--LtNkevIAINQD~lG~~~~~-v~----~~~~--~~vW~k~L~~g~~aVal~N~~~~- 332 (386)
T PLN02808 263 AKAPLLIGCDIRSMDNETFEL--LSNKEVIAVNQDKLGVQGKK-VK----KDGD--LEVWAGPLSKKRVAVVLWNRGSS- 332 (386)
T ss_pred HhCcceecCCcCcCCHHHHHH--hcCHHHHhhcCCccccCcEE-EE----ecCC--eEEEEEECCCCCEEEEEEECCCC-
Confidence 999999997766554333222 455557777665 555432 21 2233 6777763 55678999997653
Q ss_pred ceeccccccccCCCCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEe
Q 008551 388 WCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVP 464 (561)
Q Consensus 388 w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~P 464 (561)
+ .+.++.++|+.+ .. .+.|-|++.++++..-. ....++++|+||++.+|.+.|
T Consensus 333 --------------~--~~~~~~~~~lgl-~~------~~~~~vrDlWs~~~~g~-~~~~~~~~v~pHg~~~~rlt~ 385 (386)
T PLN02808 333 --------------R--ATITARWSDIGL-NS------SAVVNARDLWAHSTQSS-VKGQLSALVESHACKMYVLTP 385 (386)
T ss_pred --------------C--EEEEEEHHHhCC-CC------CCceEEEECCCCCccCc-ccceEEEEECCceEEEEEEeC
Confidence 2 233366777652 10 24688999999975321 245689999999999999887
No 10
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=1.1e-41 Score=353.59 Aligned_cols=303 Identities=16% Similarity=0.142 Sum_probs=198.4
Q ss_pred CccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCc----ccccccccccccccCcccC-
Q 008551 7 WFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFE----FRADNTANFANRLTHIKEN- 78 (561)
Q Consensus 7 ~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~- 78 (561)
+|||||||+|+++|||+.|+++++ +.+.|+. ++||+|||||+...+.+.... ......+.. +.+.++
T Consensus 2 pMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~----G~l~pd~ 76 (357)
T PLN03231 2 PRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKW----GRPLPDP 76 (357)
T ss_pred CCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCC----CCcccCc
Confidence 699999999999999999999998 5666665 369999999997542110000 000001222 334565
Q ss_pred cccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCccccccccccc-CCCCCCCCCC---
Q 008551 79 HKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYP-VSSPGVQSNE--- 154 (561)
Q Consensus 79 ~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~-~~~~g~~~~~--- 154 (561)
+|||+++. ++|||+|+++||+ +||| +||. .+. |+...+ . +.. +| ..+||+.+++
T Consensus 77 ~rFPs~~~--------~~G~k~lADyvHs-~GLK-fGIY-~~~----G~~tca-~----~~~--~pi~G~~Gs~g~~~~a 134 (357)
T PLN03231 77 KRWPSTTG--------GKGFAPIAAKVHA-LGLK-LGIH-VMR----GISTTA-V----KKK--TPILGAFKSNGHAWNA 134 (357)
T ss_pred ccCCCCcc--------ccCcHHHHHHHHh-CCcc-eEEE-ecC----Cccchh-c----ccC--CccCCCCcccccccch
Confidence 69998433 4699999999999 6999 6884 333 343221 0 001 11 1334544432
Q ss_pred CCcccccc----ccCC-CCC-CCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHH
Q 008551 155 PCDAFDSI----AKNG-LGL-VNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIA 228 (561)
Q Consensus 155 pd~~~~~~----~~~g-~g~-~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~ 228 (561)
.|++.... .... +++ .+++.||+||+...+++|+|||||||+|+|+.-. ....+...++++||.++
T Consensus 135 ~Dia~~~~~c~~~~~~~~~v~~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~~------~~~~~~y~~m~~AL~~t-- 206 (357)
T PLN03231 135 KDIALMDQACPWMQQCFVGVNTSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGAE------NPQLDEILTVSKAIRNS-- 206 (357)
T ss_pred hhhccccccccccccccccccccchhHHHHHHHHHHHHHHhCCCEEeecccCCCC------cccHHHHHHHHHHHHHh--
Confidence 22221100 0111 244 4578999999999999999999999999876311 11223345566666654
Q ss_pred hhCCCCceEeeccCCCCCC--cc---ccccCeEeecCCCCCCCccchhHHHHHHhhhh-------hhhcCCCCCCCccCc
Q 008551 229 RNFRNNDIICCMSHNTDGL--YS---AKRSAVIRASDDFWPRDPASHTIHIASVAYNT-------IFLGEFMQPDWDMFH 296 (561)
Q Consensus 229 ~~f~g~~ii~cms~~~~~l--~~---~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~ns-------l~~~~~~~pD~DMf~ 296 (561)
||+|++|+|++.... |. .+.+|+||+|+|+++.|..........+.+.. -+.|+++|||+||+.
T Consensus 207 ----GRpIv~Slc~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~ 282 (357)
T PLN03231 207 ----GRPMIYSLSPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLP 282 (357)
T ss_pred ----CCCeEEEecCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchh
Confidence 899999999864332 22 35689999999999999875544322222222 145778999999998
Q ss_pred ccC------------------hhHHHHHHHHHhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCC
Q 008551 297 SLH------------------PMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPT 350 (561)
Q Consensus 297 s~~------------------~~a~~Haa~raisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~ 350 (561)
.++ .+.++|+++|||+.+||+++..+.+.+-+.|.- |.+.+||+.+|-.+-.
T Consensus 283 vG~~g~~~~~~g~~~~~glT~~E~rthfslWam~~SPLiiG~DL~~~~~~tl~i--LtN~evIAINQD~lG~ 352 (357)
T PLN03231 283 FGRLTDPAAAYGPYRNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRLDNETLSL--LTNPTVLEVNSHSTGN 352 (357)
T ss_pred cCCCCCCcccccccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHH--hcChHHheecCCcccc
Confidence 873 367999999999999999997766655544443 4555588887755433
No 11
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=7.3e-40 Score=353.49 Aligned_cols=311 Identities=15% Similarity=0.158 Sum_probs=196.8
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCc-ccccccccccccccCcccC-
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFE-FRADNTANFANRLTHIKEN- 78 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~- 78 (561)
...+|||||||+|+++|||+.|+++++. .+.|+. ++||+||||||...+++.... ...+..+.++ || .++
T Consensus 29 ~TPPMGWNSWn~f~~~I~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~G-rL---vPDp 103 (633)
T PLN02899 29 SFPPRGWNSYDSFSWIVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWG-RP---IPDP 103 (633)
T ss_pred CCCCCCCcchhhhccCCCHHHHHHHHHH-HHcchHhhCCeEEEEccccccccccccccccccccccCCCC-CC---ccCc
Confidence 4568999999999999999999999995 345555 369999999997643321100 0001112222 34 465
Q ss_pred cccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCC-----CCcccccccccccCCCCCCCCC
Q 008551 79 HKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGV-----TGMEHYESKMQYPVSSPGVQSN 153 (561)
Q Consensus 79 ~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~-----~~~~~y~~~~~~~~~~~g~~~~ 153 (561)
+|||++++ ++|||+++++||+ +||| +|| |.+.| +...+ |+.... +...|+..-++ -.
T Consensus 104 ~RFPSs~~--------g~GmK~LADYVHs-kGLK-FGI-Y~~~G----i~tcA~~~~~PI~gs~-~g~~y~~s~~~--~~ 165 (633)
T PLN02899 104 GRWPSSRG--------GKGFTEVAEKVHA-MGLK-FGI-HVMRG----ISTQAVNANTPILDAV-KGGAYEESGRQ--WR 165 (633)
T ss_pred ccCCCCcc--------CCCcHHHHHHHHh-CCcc-eEE-EecCC----CcccccccCCcccccc-ccccccccccc--cc
Confidence 69998433 4699999999999 6999 688 45544 42211 110000 00000000000 01
Q ss_pred CCCccccccc----cCC-CCC-CCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHH
Q 008551 154 EPCDAFDSIA----KNG-LGL-VNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASI 227 (561)
Q Consensus 154 ~pd~~~~~~~----~~g-~g~-~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~ 227 (561)
..|++....+ ..| .++ .+++.+++||+++++.+|+|||||||+|+|+. + . ...+..+++++||.++
T Consensus 166 a~DIa~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-~----~--~~~~ey~~ms~AL~aT- 237 (633)
T PLN02899 166 AKDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-D----D--FDLEEITYVSEVLKEL- 237 (633)
T ss_pred hhhccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-C----C--CChHHHHHHHHHHHHh-
Confidence 2222211110 011 122 23567899999999999999999999998763 1 1 1233355667776665
Q ss_pred HhhCCCCceEeeccCCCCCC--cc---ccccCeEeecCCCCCCCccchhHHHHHHhhhh-hhh---c--CCCCCCCccCc
Q 008551 228 ARNFRNNDIICCMSHNTDGL--YS---AKRSAVIRASDDFWPRDPASHTIHIASVAYNT-IFL---G--EFMQPDWDMFH 296 (561)
Q Consensus 228 ~~~f~g~~ii~cms~~~~~l--~~---~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~ns-l~~---~--~~~~pD~DMf~ 296 (561)
||+|++|+|++.... |. .+++|+||+++|+|+.|............+.. ... + ++.|||+||+.
T Consensus 238 -----GRPIvySLspG~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~ 312 (633)
T PLN02899 238 -----DRPIVYSLSPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLP 312 (633)
T ss_pred -----CCCeEEEecCCcccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceec
Confidence 899999999865432 22 35689999999999999875543222222221 111 1 24899999998
Q ss_pred ccC------------------hhHHHHHHHHHhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCCcc
Q 008551 297 SLH------------------PMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRD 352 (561)
Q Consensus 297 s~~------------------~~a~~Haa~raisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d 352 (561)
.+. .+.++|+++|||+.+||+++..+.+.+-+.|.-| .+.+||+.+|.+.-.+.
T Consensus 313 VG~lg~~~~n~G~~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~IL--TNkeVIAINQds~~n~~ 384 (633)
T PLN02899 313 LGWLTDPGSNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLI--TNPTLLEINSHSSNNME 384 (633)
T ss_pred ccCCCccccccCccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHh--cCHHHeEEccCccCCee
Confidence 771 3679999999999999999976666665554444 44458888888776544
No 12
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-34 Score=290.13 Aligned_cols=345 Identities=17% Similarity=0.233 Sum_probs=235.8
Q ss_pred CCccccchhhhccCCC----------HHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCcccccccccccccc
Q 008551 6 NWFGWCTWDAFYTDVT----------GEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFEFRADNTANFANRL 72 (561)
Q Consensus 6 ~~~GWcTW~a~~~~vt----------e~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l 72 (561)
.+|||++|+.|.|+++ |+.+++.++.|++.|+. +.||+|||||....++.++ ||
T Consensus 33 P~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~g-------------rL 99 (414)
T KOG2366|consen 33 PQMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDG-------------RL 99 (414)
T ss_pred CCcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCcc-------------cc
Confidence 5799999999999888 99999999999998877 5799999999999887552 45
Q ss_pred cCcccCcccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCC
Q 008551 73 THIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQS 152 (561)
Q Consensus 73 ~~~~~~~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~ 152 (561)
. .++++||+ |++++++++|+ .|||+ ||+.+. + .|.| .-+ ||++.
T Consensus 100 v--a~~~rFP~-------------Gi~~ladyvHs-~GLKl------------GiYsD~-G--~~TC-~g~----PGS~~ 143 (414)
T KOG2366|consen 100 V--ADPSRFPS-------------GIKALADYVHS-KGLKL------------GIYSDA-G--NFTC-AGY----PGSLG 143 (414)
T ss_pred c--cChhhccc-------------chhhhhhchhh-cCCce------------eeeecc-C--chhh-ccC----Ccccc
Confidence 3 23468996 99999999999 59994 677774 3 3444 333 55544
Q ss_pred CCCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCC
Q 008551 153 NEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFR 232 (561)
Q Consensus 153 ~~pd~~~~~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~ 232 (561)
++ ..||+.| |+|||||+|+|+|+.... ..++....+.+||. + +
T Consensus 144 ~e-----------------~~DA~tF--------A~WgvDylKlD~C~~~~~------~~~~~Yp~ms~aLN----~--t 186 (414)
T KOG2366|consen 144 HE-----------------ESDAKTF--------ADWGVDYLKLDGCFNNLI------TMPEGYPIMSRALN----N--T 186 (414)
T ss_pred hh-----------------hhhhhhh--------HhhCCcEEeccccccccc------cccccchhHHHHHh----c--c
Confidence 43 3678887 999999999999985211 11222233444544 3 4
Q ss_pred CCceEeeccCCCCC---Ccc-------ccccCeEeecCCCCCCCccchhHHHHH---HhhhhhhhcCCCCCCCccCcccC
Q 008551 233 NNDIICCMSHNTDG---LYS-------AKRSAVIRASDDFWPRDPASHTIHIAS---VAYNTIFLGEFMQPDWDMFHSLH 299 (561)
Q Consensus 233 g~~ii~cms~~~~~---l~~-------~~~~~~~R~SdDf~p~~~~~~~~hi~~---~a~nsl~~~~~~~pD~DMf~s~~ 299 (561)
||+|++|+|.||.. +++ ++..|.||++||+.+.|.+.-.+--+. +-..+...|++.|+|+||+.+++
T Consensus 187 Grpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WNDpDmL~iGN 266 (414)
T KOG2366|consen 187 GRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWNDPDMLEIGN 266 (414)
T ss_pred CCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCChhHhhcCC
Confidence 89999999999853 341 357799999999999888655543322 22223466889999999999886
Q ss_pred -----hhHHHHHHHHHhcCCceEecCCCC---CCCHHHHhhhcCCCCcEEeeCCCC--CCCccccccCCCCCCcceEEEE
Q 008551 300 -----PMAEYHGAARAVGGCAIYVSDKPG---QHDFNLLRKLVLPDGSILRAKLPG--RPTRDCLFSDPARDGKSLLKIW 369 (561)
Q Consensus 300 -----~~a~~Haa~raisggPlyisD~pg---~~d~~lL~~l~~~dg~vlr~~~~g--~p~~d~lf~d~~~~~~~~lkv~ 369 (561)
++...|++.||+..+||.+|.... ....+ ++.+..++..+|-- ..-|. .+.++. .+.||
T Consensus 267 ~G~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~-----il~nk~~IaiNQDplgiqGr~-----i~~e~~-~ievw 335 (414)
T KOG2366|consen 267 GGMSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKE-----ILQNKEVIAINQDPLGIQGRK-----IVLEGD-SIEVW 335 (414)
T ss_pred CCccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHH-----HhcChhheeccCCccchhhee-----eeecCC-ceEEE
Confidence 567889999999999999995532 22233 35666666666531 11111 111222 27888
Q ss_pred eecCCceeEEEEeecCCcceeccccccccCCCCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeee
Q 008551 370 NLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLP 449 (561)
Q Consensus 370 ~~~~~~~vvg~FN~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~ 449 (561)
...-..-.+++|+++... + ..|..++ .+++.+.+... ...|-+.+.+++....++..+++.
T Consensus 336 ~~pls~~~~Ava~lNr~~----~-------~~~~~It-~~~l~~~g~~~-------~~~~~~~dLw~~~~~~~~~~~~i~ 396 (414)
T KOG2366|consen 336 SGPLSGKSVAVAFLNRRK----T-------GIPARIT-AASLRELGLTN-------PASYTAHDLWSGVLGFLPTKDSIS 396 (414)
T ss_pred eeccCCceEEEEEecccC----C-------CCCcccc-HHHHhhcCCCC-------CceeEeeehhhccccccccCCeEE
Confidence 875333334444443321 0 0122233 12344433211 345778888888766667789999
Q ss_pred EEecCCceEEEEEEeee
Q 008551 450 ITLKSREYEVYTVVPVK 466 (561)
Q Consensus 450 v~L~~~~~ei~~~~Pv~ 466 (561)
++++|++.-+|.+.|..
T Consensus 397 ~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 397 AQVNPHGVVLFVLHPSN 413 (414)
T ss_pred EEECCCCcEEEEEEecc
Confidence 99999999999998864
No 13
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.91 E-value=6.5e-24 Score=225.59 Aligned_cols=211 Identities=21% Similarity=0.301 Sum_probs=130.6
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQ 82 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP 82 (561)
--.++|||||++|++++||++|++.++.+++.|++ +++||||||..+++.. ..+++|.++ +|||
T Consensus 39 ~~~pv~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e--~fviDDGW~~~r~~d~-------------~~~GdW~~~~~kFP 103 (394)
T PF02065_consen 39 KPPPVGWNSWEAYYFDITEEKILELADAAAELGYE--YFVIDDGWFGGRDDDN-------------AGLGDWEPDPKKFP 103 (394)
T ss_dssp SS--EEEESHHHHTTG--HHHHHHHHHHHHHHT-S--EEEE-SSSBCTESTTT-------------STTSBECBBTTTST
T ss_pred CCCceEEEcccccCcCCCHHHHHHHHHHHHHhCCE--EEEEcCccccccCCCc-------------ccCCceeEChhhhC
Confidence 34679999999999999999999999999999997 9999999998754321 257788876 5999
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccccc
Q 008551 83 KNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSI 162 (561)
Q Consensus 83 ~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~ 162 (561)
+ ||++++++||+ +|+| +|+|.++. -+.|+++..+.+...++.....+.. .
T Consensus 104 ~-------------Gl~~l~~~i~~-~Gmk-~GlW~ePe----~v~~~S~l~~~hPdw~l~~~~~~~~-----------~ 153 (394)
T PF02065_consen 104 N-------------GLKPLADYIHS-LGMK-FGLWFEPE----MVSPDSDLYREHPDWVLRDPGRPPT-----------L 153 (394)
T ss_dssp T-------------HHHHHHHHHHH-TT-E-EEEEEETT----EEESSSCHCCSSBGGBTCCTTSE-E-----------C
T ss_pred C-------------cHHHHHHHHHH-CCCe-EEEEeccc----cccchhHHHHhCccceeecCCCCCc-----------C
Confidence 6 99999999999 6999 79999875 3667776544333332211110000 0
Q ss_pred ccCC--CCCCCHHHHHHH-HHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHH---HHHHHHhhCCCCce
Q 008551 163 AKNG--LGLVNPEKVFHF-YDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQA---LEASIARNFRNNDI 236 (561)
Q Consensus 163 ~~~g--~g~~~p~~a~~f-y~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~A---l~~s~~~~f~g~~i 236 (561)
..+. +.+. .++|++| ++.+.+.|++|||||+|+|++..+...+....+ +...+|..+ |-..+++.||+.-|
T Consensus 154 ~r~~~vLD~~-~pev~~~l~~~i~~ll~~~gidYiK~D~n~~~~~~~~~~~~--~~~~~~~~~~y~l~~~L~~~~P~v~i 230 (394)
T PF02065_consen 154 GRNQYVLDLS-NPEVRDYLFEVIDRLLREWGIDYIKWDFNRDITEAGSPSLP--EGYHRYVLGLYRLLDRLRARFPDVLI 230 (394)
T ss_dssp BTTBEEB-TT-SHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-TTS-SSTTS---GHHHHHHHHHHHHHHHHHHHTTTSEE
T ss_pred cccceEEcCC-CHHHHHHHHHHHHHHHHhcCCCEEEeccccCCCCCCCCCch--HHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 0111 2333 3567777 455778899999999999998755433222111 333334332 23446778898878
Q ss_pred EeeccCCCCCCcc-ccccCeEeecCCC
Q 008551 237 ICCMSHNTDGLYS-AKRSAVIRASDDF 262 (561)
Q Consensus 237 i~cms~~~~~l~~-~~~~~~~R~SdDf 262 (561)
.+|-|.+...=+. -.+....-+||+-
T Consensus 231 E~CssGG~R~D~g~l~~~~~~w~SD~t 257 (394)
T PF02065_consen 231 ENCSSGGGRFDPGMLYYTPQSWTSDNT 257 (394)
T ss_dssp EE-BTTBTTTSHHHHCCSSEEESBST-
T ss_pred EeccCCCCccccchheeccccccCCcc
Confidence 8887775432221 1344555566644
No 14
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2.2e-18 Score=182.83 Aligned_cols=199 Identities=22% Similarity=0.328 Sum_probs=128.9
Q ss_pred CCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccCCC
Q 008551 6 NWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKN 84 (561)
Q Consensus 6 ~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~ 84 (561)
.++|||||+++|.++|++.|+++++.+++.|++ +++||||||..++|.. ..|+||-.| +|||+
T Consensus 292 rPi~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd~-------------~slGDWlv~seKfPs- 355 (687)
T COG3345 292 RPIGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDDL-------------KSLGDWLVNSEKFPS- 355 (687)
T ss_pred CcceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcch-------------hhhhceecchhhccc-
Confidence 579999999999999999999999999999976 9999999998877633 247788876 69996
Q ss_pred CCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccccc--
Q 008551 85 GKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSI-- 162 (561)
Q Consensus 85 ~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~-- 162 (561)
|+..+++.|++ .|++ +|+|.+++- |+.+|+. |+ .+|||.+..-
T Consensus 356 ------------giE~li~~I~e-~Gl~-fGIWlePem----vs~dSdl---fr--------------qHPDWvvk~~G~ 400 (687)
T COG3345 356 ------------GIEELIEAIAE-NGLI-FGIWLEPEM----VSEDSDL---FR--------------QHPDWVVKVNGY 400 (687)
T ss_pred ------------cHHHHHHHHHH-cCCc-cceeecchh----cccchHH---Hh--------------hCCCeEEecCCc
Confidence 99999999999 7999 799988763 6666544 33 3466653210
Q ss_pred --c--cCCCC--CCCHHH--------HHHHHHHHHHHHH-HcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHH
Q 008551 163 --A--KNGLG--LVNPEK--------VFHFYDELHSYLA-SAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASI 227 (561)
Q Consensus 163 --~--~~g~g--~~~p~~--------a~~fy~~~~~~la-~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~ 227 (561)
. .+.++ +-.|.- ++.+.....+|++ ++|..++|.|+... +.- .+.. ...++-. .-+
T Consensus 401 p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~----~~l-~qqr---y~ly~l~-~~l 471 (687)
T COG3345 401 PLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFW----GAL-PQQR---YQLYRLF-DQL 471 (687)
T ss_pred cccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCC----ccc-cchH---HHHHHHH-HHh
Confidence 0 11122 223443 4444444444555 45555555555331 000 0111 1112222 234
Q ss_pred HhhCCCCceEeeccCCCC----------CCccccc------cCeEeecCCCCC
Q 008551 228 ARNFRNNDIICCMSHNTD----------GLYSAKR------SAVIRASDDFWP 264 (561)
Q Consensus 228 ~~~f~g~~ii~cms~~~~----------~l~~~~~------~~~~R~SdDf~p 264 (561)
..+|+.....+|-+.... .+|++.. -.+.|.+.+++|
T Consensus 472 ~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iqrg~s~~~P 524 (687)
T COG3345 472 NLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQRGGSYTYP 524 (687)
T ss_pred hhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhccccccCcccCC
Confidence 567777667778776531 2354422 356799999999
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.52 E-value=8.7e-14 Score=144.32 Aligned_cols=147 Identities=20% Similarity=0.348 Sum_probs=102.3
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQ 82 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP 82 (561)
++....||||++++..+|+++|++.++.+++.|||+..++|||+||+..+ +|.- ++|||
T Consensus 11 ~~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g--------------------~f~~d~~~FP 70 (303)
T cd06592 11 MFRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG--------------------DFDFDPTKFP 70 (303)
T ss_pred HhCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC--------------------ccccChhhCC
Confidence 46677899999999999999999999999999999999999999996432 3444 45999
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccc---cccccCCCCCCCCCCCCccc
Q 008551 83 KNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYES---KMQYPVSSPGVQSNEPCDAF 159 (561)
Q Consensus 83 ~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~---~~~~~~~~~g~~~~~pd~~~ 159 (561)
.++.++++||+ .|+| +++|..+. |.++++. |+. +-..-+...| ..|...
T Consensus 71 --------------dp~~mi~~l~~-~G~k-~~l~i~P~-----i~~~s~~---~~e~~~~g~~vk~~~g---~~~~~~- 122 (303)
T cd06592 71 --------------DPKGMIDQLHD-LGFR-VTLWVHPF-----INTDSEN---FREAVEKGYLVSEPSG---DIPALT- 122 (303)
T ss_pred --------------CHHHHHHHHHH-CCCe-EEEEECCe-----eCCCCHH---HHhhhhCCeEEECCCC---CCCccc-
Confidence 49999999999 6999 89998764 6665533 332 1111111111 011000
Q ss_pred cccccCCC-CCCC--HHHHHHHHHHHHHHHH-HcCCcEEEEcccc
Q 008551 160 DSIAKNGL-GLVN--PEKVFHFYDELHSYLA-SAGIDGVKVDVQN 200 (561)
Q Consensus 160 ~~~~~~g~-g~~~--p~~a~~fy~~~~~~la-~~GVD~vKvD~q~ 200 (561)
.. ..|. +++| .++|+++|.+.++.+. ++|||++|.|.+-
T Consensus 123 ~~--w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 165 (303)
T cd06592 123 RW--WNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGE 165 (303)
T ss_pred ce--ecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCCC
Confidence 00 0121 1222 3578888877666555 9999999999865
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.30 E-value=7.3e-11 Score=122.74 Aligned_cols=204 Identities=15% Similarity=0.169 Sum_probs=121.8
Q ss_pred hhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccCCCCCCCCCC
Q 008551 13 WDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKNGKEGQRE 91 (561)
Q Consensus 13 W~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~~~~~~~~ 91 (561)
|.+-+...|+++|++.++.+++.|||+..++|||+|+... ++.+|.-| +|||+
T Consensus 14 ~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~------------------~~~~f~~d~~~FPd-------- 67 (308)
T cd06593 14 WLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEF------------------QWCDFEFDPDRFPD-------- 67 (308)
T ss_pred HHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCC------------------cceeeEECcccCCC--------
Confidence 4444445999999999999999999999999999999432 23456665 59994
Q ss_pred CCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCC
Q 008551 92 EDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVN 171 (561)
Q Consensus 92 ~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~ 171 (561)
++.+++++|+ .|+| +.+|..++ |.++++..+....+-...+...|...... .|. ...+++|
T Consensus 68 ------~~~~i~~l~~-~G~~-~~~~~~P~-----i~~~~~~~~e~~~~g~~v~~~~g~~~~~~--~w~----g~~~~~D 128 (308)
T cd06593 68 ------PEGMLSRLKE-KGFK-VCLWINPY-----IAQKSPLFKEAAEKGYLVKKPDGSVWQWD--LWQ----PGMGIID 128 (308)
T ss_pred ------HHHHHHHHHH-CCCe-EEEEecCC-----CCCCchhHHHHHHCCeEEECCCCCeeeec--ccC----CCccccc
Confidence 8999999998 7999 89998864 66665432211111111111111110000 010 1112333
Q ss_pred --HHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCC------hhhHHHHHHHHHHHHHHhhCC-CCceEeeccC
Q 008551 172 --PEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGG------RVKLSRKYHQALEASIARNFR-NNDIICCMSH 242 (561)
Q Consensus 172 --p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~------~~~~~~~y~~Al~~s~~~~f~-g~~ii~cms~ 242 (561)
.++|++||.+.++.+.+.|||++|.|.+-.+..-...+.+ +-.....|.++...++++..+ .|+++.+-|.
T Consensus 129 ftnp~a~~w~~~~~~~~~~~Gid~~~~D~~e~~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~ 208 (308)
T cd06593 129 FTNPDACKWYKDKLKPLLDMGVDCFKTDFGERIPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSA 208 (308)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCcEEecCCCCCCCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCC
Confidence 4678999999999999999999999987542111000111 112233444555444555444 3578887665
Q ss_pred CCCCCccccccCeEeecCCCCCCC
Q 008551 243 NTDGLYSAKRSAVIRASDDFWPRD 266 (561)
Q Consensus 243 ~~~~l~~~~~~~~~R~SdDf~p~~ 266 (561)
... ..+++..| |.|....|
T Consensus 209 ~~G---sqry~~~w--~GD~~s~w 227 (308)
T cd06593 209 WAG---SQKYPVHW--GGDCESTF 227 (308)
T ss_pred ccc---cccCCCEE--CCCcccCH
Confidence 431 11334444 56655444
No 17
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.86 E-value=5e-08 Score=102.01 Aligned_cols=136 Identities=15% Similarity=0.250 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCCCCCCCCCCCccCH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~~~~~~~~~~~~Gl 98 (561)
-|+++|++.++.+++.+||+..|.||++|+..+.+.. ...+|.- ++|||+ .
T Consensus 21 ~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~--------------~~~~f~wd~~~FPd--------------p 72 (317)
T cd06598 21 RNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG--------------HMGNLDWDRKAFPD--------------P 72 (317)
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC--------------ceeeeEeccccCCC--------------H
Confidence 4899999999999999999999999999997654211 2334554 469995 8
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---c-ccCCCCCCCCCCCCccccccccCC-CCCCC--
Q 008551 99 RHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---Q-YPVSSPGVQSNEPCDAFDSIAKNG-LGLVN-- 171 (561)
Q Consensus 99 k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~-~~~~~~g~~~~~pd~~~~~~~~~g-~g~~~-- 171 (561)
+.+++++|+ .|+| +.+|..+. |.++++. |+... . ..+...| .|-. .+. ..| .+++|
T Consensus 73 ~~mi~~L~~-~G~k-~~~~v~P~-----v~~~~~~---y~e~~~~g~l~~~~~~~----~~~~-~~~--w~g~~~~~Dft 135 (317)
T cd06598 73 AGMIADLAK-KGVK-TIVITEPF-----VLKNSKN---WGEAVKAGALLKKDQGG----VPTL-FDF--WFGNTGLIDWF 135 (317)
T ss_pred HHHHHHHHH-cCCc-EEEEEcCc-----ccCCchh---HHHHHhCCCEEEECCCC----CEee-eec--cCCCccccCCC
Confidence 999999999 6999 67876553 6565533 33221 1 0000001 0100 000 011 12232
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
.++|+++|.+.++.+.+.|||++|.|.+-
T Consensus 136 np~a~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 136 DPAAQAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred CHHHHHHHHHHHHHhhhCCccEEEecCCC
Confidence 35689999999999999999999999874
No 18
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.79 E-value=2.7e-07 Score=95.42 Aligned_cols=201 Identities=19% Similarity=0.212 Sum_probs=116.4
Q ss_pred CccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccCCCC
Q 008551 7 WFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKNG 85 (561)
Q Consensus 7 ~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~~ 85 (561)
++=+|.|. .-|+++|++.++.+++.|||...|.||++|+.......+ ...+.+|.-| ++||
T Consensus 13 G~~qsr~~----y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~-----------~~~~~~ft~d~~~FP--- 74 (292)
T cd06595 13 GNWWSRYW----PYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKY-----------GSGWTGYSWNRKLFP--- 74 (292)
T ss_pred HhHhhCCc----CCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccc-----------cCCcceeEEChhcCC---
Confidence 33346653 248999999999999999999999999999875321100 0134456644 6899
Q ss_pred CCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccC
Q 008551 86 KEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKN 165 (561)
Q Consensus 86 ~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~ 165 (561)
..+.+++++|+ .|+| +-+|.-+. -++.+.. +.|+.- .. ..+.... ..
T Consensus 75 -----------dp~~mi~~Lh~-~G~k-~v~~v~P~---~~~~~~~---~~y~~~-~~---~~~~~~~----------~~ 121 (292)
T cd06595 75 -----------DPEKLLQDLHD-RGLK-VTLNLHPA---DGIRAHE---DQYPEM-AK---ALGVDPA----------TE 121 (292)
T ss_pred -----------CHHHHHHHHHH-CCCE-EEEEeCCC---cccCCCc---HHHHHH-HH---hcCCCcc----------cC
Confidence 48999999999 6999 56775543 1233321 124321 00 0010000 01
Q ss_pred C---CCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhH--HHHHHHHHHHHHHhhCCCCceEeec
Q 008551 166 G---LGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKL--SRKYHQALEASIARNFRNNDIICCM 240 (561)
Q Consensus 166 g---~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~--~~~y~~Al~~s~~~~f~g~~ii~cm 240 (561)
+ +...+|+-.+.|++.+++.|.+.|||++|.|.+-.......+. .... .+..+.++. + -..|++|.+=
T Consensus 122 ~~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E~~~~~~~~~--~~~~~~~~~~y~~~~----~-~~~r~f~lsR 194 (292)
T cd06595 122 GPILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQGNRTRTPGL--DPLWWLNHVHYLDSA----R-NGRRPLIFSR 194 (292)
T ss_pred CeEEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCCcccccCCc--chHHHHHHHHHHHhh----c-cCCCcEEEEe
Confidence 1 2234555455577999999999999999999754221111111 1111 111222221 1 2357788776
Q ss_pred cCCCCCCccccccCeEeecCCCCCCCccch
Q 008551 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASH 270 (561)
Q Consensus 241 s~~~~~l~~~~~~~~~R~SdDf~p~~~~~~ 270 (561)
|.... ..+++..| |.|....|..+.
T Consensus 195 s~~~G---~qry~~~W--sGD~~s~W~~l~ 219 (292)
T cd06595 195 WAGLG---SHRYPIGF--SGDTIISWASLA 219 (292)
T ss_pred ecccC---CCcCCCcc--CCCcccCHHHHH
Confidence 64321 13556666 788877665443
No 19
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.74 E-value=4.4e-08 Score=102.41 Aligned_cols=150 Identities=14% Similarity=0.159 Sum_probs=93.4
Q ss_pred Cccccchhhhc--cCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCC
Q 008551 7 WFGWCTWDAFY--TDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQK 83 (561)
Q Consensus 7 ~~GWcTW~a~~--~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~ 83 (561)
++=.|.|. |. ...++++|++.++.+++.+||+..|.||++|++.... ...+|.- .++||+
T Consensus 12 G~~~sr~~-Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~----------------~~~~f~~d~~~FPd 74 (317)
T cd06599 12 GYSGSTMY-YTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGG----------------KRYVFNWNKDRFPD 74 (317)
T ss_pred HHHhcCCC-CCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCC----------------ceeeeecCcccCCC
Confidence 33456662 22 2467999999999999999999999999999976221 1112333 469994
Q ss_pred CCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccc
Q 008551 84 NGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA 163 (561)
Q Consensus 84 ~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~ 163 (561)
.+.+++++|+ .|+| +.+|.-++ |.++++..+....+-..-+...| ..|... . .
T Consensus 75 --------------p~~mi~~L~~-~g~k-~~~~i~P~-----i~~~~~~y~e~~~~g~~v~~~~g---~~~~~~--~-~ 127 (317)
T cd06599 75 --------------PAAFVAKFHE-RGIR-LAPNIKPG-----LLQDHPRYKELKEAGAFIKPPDG---REPSIG--Q-F 127 (317)
T ss_pred --------------HHHHHHHHHH-CCCE-EEEEeCCc-----ccCCCHHHHHHHHCCcEEEcCCC---CCccee--c-c
Confidence 8999999999 6999 67787654 66655332211221111111111 111110 0 0
Q ss_pred cCCCC-CCC--HHHHHHHHHHHH-HHHHHcCCcEEEEcccc
Q 008551 164 KNGLG-LVN--PEKVFHFYDELH-SYLASAGIDGVKVDVQN 200 (561)
Q Consensus 164 ~~g~g-~~~--p~~a~~fy~~~~-~~la~~GVD~vKvD~q~ 200 (561)
..|.+ ++| .++|+++|...+ +.|.+.|||++|.|.+-
T Consensus 128 w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 128 WGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred cCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 12222 222 356888887755 78899999999999874
No 20
>PRK10658 putative alpha-glucosidase; Provisional
Probab=98.73 E-value=1.3e-07 Score=107.76 Aligned_cols=140 Identities=16% Similarity=0.242 Sum_probs=94.7
Q ss_pred hccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCCCCCCCCCCC
Q 008551 16 FYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNGKEGQREEDP 94 (561)
Q Consensus 16 ~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~~~~~~~~~~ 94 (561)
|+.+.+|+.|++.++.+++.+||...+.||+.|++.. .|.+|+- +++||+
T Consensus 276 ~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~~w~~~~------------------~~~~f~wd~~~FPd----------- 326 (665)
T PRK10658 276 FTTNYDEATVNSFIDGMAERDLPLHVFHFDCFWMKEF------------------QWCDFEWDPRTFPD----------- 326 (665)
T ss_pred cccCCCHHHHHHHHHHHHHcCCCceEEEEchhhhcCC------------------ceeeeEEChhhCCC-----------
Confidence 5556789999999999999999999999999998642 1345654 468994
Q ss_pred ccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCC--H
Q 008551 95 ALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVN--P 172 (561)
Q Consensus 95 ~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~--p 172 (561)
.+.+++++|+ .|+| +.+|..+ +|.++++..+.-..+-...+...|. .+.++.. .++.+++| .
T Consensus 327 ---p~~mi~~L~~-~G~k-~~~~i~P-----~i~~~s~~f~e~~~~gy~vk~~~G~-----~~~~~~W-~g~~~~~Dftn 390 (665)
T PRK10658 327 ---PEGMLKRLKA-KGLK-ICVWINP-----YIAQKSPLFKEGKEKGYLLKRPDGS-----VWQWDKW-QPGMAIVDFTN 390 (665)
T ss_pred ---HHHHHHHHHH-CCCE-EEEeccC-----CcCCCchHHHHHHHCCeEEECCCCC-----Eeeeeec-CCCceeecCCC
Confidence 8999999999 6999 7888655 4666553321111111111111121 1111111 12233443 4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
++|+++|.+.++.|.+.|||++|.|..-
T Consensus 391 p~ar~W~~~~~~~l~d~Gvdgfw~D~gE 418 (665)
T PRK10658 391 PDACKWYADKLKGLLDMGVDCFKTDFGE 418 (665)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEecCCc
Confidence 6789999998898999999999999754
No 21
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.68 E-value=2.8e-07 Score=96.50 Aligned_cols=134 Identities=16% Similarity=0.194 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccCCCCCCCCCCCCCccCH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~~~~~~~~~~~~~Gl 98 (561)
-|++.|++.++.+++.+||+..|+||..|+... ++.+|.-+ +|||+ .
T Consensus 21 ~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~------------------~~~~f~~d~~~FPd--------------p 68 (319)
T cd06591 21 KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQ------------------GWGEWKFDPERFPD--------------P 68 (319)
T ss_pred CCHHHHHHHHHHHHHhCCCccEEEEechhhcCC------------------CceeEEEChhhCCC--------------H
Confidence 399999999999999999999999999887532 23455544 58994 8
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCC-CCCCC--HHHH
Q 008551 99 RHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNG-LGLVN--PEKV 175 (561)
Q Consensus 99 k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g-~g~~~--p~~a 175 (561)
+.+++++|+ .|+| +-+|.-+ +|.++++..+....+...-+...|.... .. ..| .+++| .++|
T Consensus 69 ~~mi~~L~~-~G~k-v~~~i~P-----~v~~~~~~y~e~~~~g~~v~~~~g~~~~---~~-----w~g~~~~~Dftnp~a 133 (319)
T cd06591 69 KAMVRELHE-MNAE-LMISIWP-----TFGPETENYKEMDEKGYLIKTDRGPRVT---MQ-----FGGNTRFYDATNPEA 133 (319)
T ss_pred HHHHHHHHH-CCCE-EEEEecC-----CcCCCChhHHHHHHCCEEEEcCCCCeee---ee-----CCCCccccCCCCHHH
Confidence 999999998 6999 6677654 3666554322222221111111111100 01 112 12333 3456
Q ss_pred HHH-HHHHHHHHHHcCCcEEEEcccc
Q 008551 176 FHF-YDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 176 ~~f-y~~~~~~la~~GVD~vKvD~q~ 200 (561)
+++ ++.+++.|.+.|||++|.|.+-
T Consensus 134 ~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 134 REYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 665 5678888999999999999974
No 22
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.60 E-value=1.6e-06 Score=90.82 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCCCCCCCCCCCccCHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~~~~~~~~~~~~Glk 99 (561)
|+++|++.++.+++.+||+..|.|| .|+.......+ . +-+.+|.- +++||+ .+
T Consensus 21 s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g--------~---~~~~~f~~d~~~FPd--------------p~ 74 (317)
T cd06594 21 GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFG--------D---RLWWNWEWDPERYPG--------------LD 74 (317)
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEc-cccCccccccc--------c---eeeeeeEEChhhCCC--------------HH
Confidence 9999999999999999999999999 58753211100 0 01224553 468994 89
Q ss_pred HHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCccccccccCC----CCCCCH
Q 008551 100 HIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSIAKNG----LGLVNP 172 (561)
Q Consensus 100 ~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~~~~g----~g~~~p 172 (561)
.+++++|+ .|+| +-+|.-+ +|.+++... |+... +..+...|.....+- ..| +.+.+
T Consensus 75 ~mi~~Lh~-~G~~-~~~~i~P-----~v~~~~~~~--y~~~~~~g~~vk~~~g~~~~~~~-------w~g~~~~~Dftn- 137 (317)
T cd06594 75 ELIEELKA-RGIR-VLTYINP-----YLADDGPLY--YEEAKDAGYLVKDADGSPYLVDF-------GEFDCGVLDLTN- 137 (317)
T ss_pred HHHHHHHH-CCCE-EEEEecC-----ceecCCchh--HHHHHHCCeEEECCCCCeeeecc-------CCCCceeeecCC-
Confidence 99999999 6999 6677654 365554221 23221 111111111000000 012 12334
Q ss_pred HHHHHHHHH-HHHHHHHcCCcEEEEccccchhhccCCCCC--hhh----HHHHHHHHHHHHHHhhCC-CCceEeeccCCC
Q 008551 173 EKVFHFYDE-LHSYLASAGIDGVKVDVQNILETLGAGHGG--RVK----LSRKYHQALEASIARNFR-NNDIICCMSHNT 244 (561)
Q Consensus 173 ~~a~~fy~~-~~~~la~~GVD~vKvD~q~~~~~l~~~~~~--~~~----~~~~y~~Al~~s~~~~f~-g~~ii~cms~~~ 244 (561)
++|+++|.+ +.+++.+.|||++|.|.+-.+..-...+.+ ..+ ....|.+|....+++..+ .|++|.+=|...
T Consensus 138 p~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~ 217 (317)
T cd06594 138 PAARDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLHSGEDAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFT 217 (317)
T ss_pred HHHHHHHHHHHHHHhhhcCCcEEEecCCCCCCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEccccc
Confidence 467777754 555568899999999986532110001111 111 222234444444444333 567777766432
Q ss_pred CCCccccccCeEeecCCCCCCCc
Q 008551 245 DGLYSAKRSAVIRASDDFWPRDP 267 (561)
Q Consensus 245 ~~l~~~~~~~~~R~SdDf~p~~~ 267 (561)
. ..+++.+.+ |.|....|.
T Consensus 218 G---sqry~~~~W-sGD~~s~W~ 236 (317)
T cd06594 218 G---SQKYSTLFW-AGDQMVSWD 236 (317)
T ss_pred c---ccccccccc-CCCCCCCCc
Confidence 1 124444333 455555554
No 23
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.60 E-value=2.7e-06 Score=86.73 Aligned_cols=82 Identities=17% Similarity=0.385 Sum_probs=63.6
Q ss_pred CCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cc
Q 008551 2 PDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HK 80 (561)
Q Consensus 2 p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~K 80 (561)
|.+...-.+=.|-+.+...|+++|++.++.+++.+||...+.||++|+...++ + .|.-+ ++
T Consensus 3 p~~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~-----------------f-~~~~d~~~ 64 (265)
T cd06589 3 PALPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGD-----------------F-TFDWDAGK 64 (265)
T ss_pred CCCCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCce-----------------e-eeecChhh
Confidence 34444444446777777789999999999999999999999999999976443 1 02334 58
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEE
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVW 117 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvW 117 (561)
||+ ++.+++++|+ .|+| +.+|
T Consensus 65 Fpd--------------p~~~i~~l~~-~g~~-~~~~ 85 (265)
T cd06589 65 FPN--------------PKSMIDELHD-NGVK-LVLW 85 (265)
T ss_pred CCC--------------HHHHHHHHHH-CCCE-EEEE
Confidence 994 8999999999 6999 6676
No 24
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.60 E-value=2.5e-06 Score=90.15 Aligned_cols=223 Identities=17% Similarity=0.236 Sum_probs=114.5
Q ss_pred CcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCC-----CCCCCcccccccccccccccC--c
Q 008551 3 DMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGM-----DPSGFEFRADNTANFANRLTH--I 75 (561)
Q Consensus 3 ~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~-----~~~~~~~~~~~~~~~~~~l~~--~ 75 (561)
.+.=++..|.| .--|+++|++.++.+++.|||+..|.||| ||.... |-+.- .......|. +.+ |
T Consensus 8 ~walG~~~sr~----~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~y~--~~~~~~~~~--~~~~~f 78 (340)
T cd06597 8 KWAFGLWMSAN----EWDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQYT--PKDGGAPLS--YDDFSF 78 (340)
T ss_pred hHHhhhhhhcc----CCCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccchhc--ccccCCcce--eccccc
Confidence 33334445555 34789999999999999999999999996 987422 00000 000000011 112 2
Q ss_pred ccCcccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCC-cc---ccc---ccccccCCCC
Q 008551 76 KENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTG-ME---HYE---SKMQYPVSSP 148 (561)
Q Consensus 76 ~~~~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~-~~---~y~---~~~~~~~~~~ 148 (561)
...+|||+ .+.+++++|+ .|+| +-+|..+. |.++... .. .|. .+-++-+...
T Consensus 79 ~~~~~FPd--------------p~~mi~~Lh~-~G~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~g~~vk~~~ 137 (340)
T cd06597 79 PVEGRWPN--------------PKGMIDELHE-QGVK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQNYLVQRGV 137 (340)
T ss_pred CccccCCC--------------HHHHHHHHHH-CCCE-EEEEecCc-----cccccccccccchhHHHHHHCCEEEEcCC
Confidence 22358994 9999999999 6999 78887664 5443210 00 010 0001111111
Q ss_pred CCCCCCCCccccccccCC----CCCCCHHHHHHHHHHHHHHHH-HcCCcEEEEccccch---hhc-cCCCCCh---hhHH
Q 008551 149 GVQSNEPCDAFDSIAKNG----LGLVNPEKVFHFYDELHSYLA-SAGIDGVKVDVQNIL---ETL-GAGHGGR---VKLS 216 (561)
Q Consensus 149 g~~~~~pd~~~~~~~~~g----~g~~~p~~a~~fy~~~~~~la-~~GVD~vKvD~q~~~---~~l-~~~~~~~---~~~~ 216 (561)
|.....|. .| .| +.+.+ ++|+++|.+.++.+. +.|||++|.|..-.. +.. ..+..++ -...
T Consensus 138 G~~~~~~~-~W-----~g~~~~~Dftn-p~a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y~ 210 (340)
T cd06597 138 GKPYRIPG-QW-----FPDSLMLDFTN-PEAAQWWMEKRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTYP 210 (340)
T ss_pred CCcccccc-cc-----CCCceeecCCC-HHHHHHHHHHHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhcccH
Confidence 11000010 01 12 22334 567888888777665 699999999976421 000 0110011 0011
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeccCCCCCCccccccCeEeecCCCCCCCcc
Q 008551 217 RKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPA 268 (561)
Q Consensus 217 ~~y~~Al~~s~~~~f~g~~ii~cms~~~~~l~~~~~~~~~R~SdDf~p~~~~ 268 (561)
..|.+|.....++. +.|+++.+=|.... ..+++..| |.|....|..
T Consensus 211 ~~~~~~~~e~~~~~-~~r~filtRs~~~G---sqry~~~W--sGD~~s~W~~ 256 (340)
T cd06597 211 NHYVRAYNDFLRRA-KKDGVTFSRAGYTG---AQAHGIFW--AGDENSTFGA 256 (340)
T ss_pred HHHHHHHHHHHHhc-cCCcEEEEecccCc---cCCCccee--cCCCCCCHHH
Confidence 23344444434443 45778777664321 12444444 6677666653
No 25
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.58 E-value=2e-07 Score=98.47 Aligned_cols=132 Identities=20% Similarity=0.283 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCCCCCCCCCCCccCH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~~~~~~~~~~~~Gl 98 (561)
-|+++|++.++.+++.|||+..+.||++|++..+ .|.- ++|||+ .
T Consensus 21 ~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~--------------------~f~~d~~~fPd--------------p 66 (339)
T cd06604 21 YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYR--------------------VFTWDKERFPD--------------P 66 (339)
T ss_pred CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCC--------------------ceeeccccCCC--------------H
Confidence 4899999999999999999999999999996322 2333 469994 8
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCccccccccCC-CCCCC--H
Q 008551 99 RHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSIAKNG-LGLVN--P 172 (561)
Q Consensus 99 k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~~~~g-~g~~~--p 172 (561)
+.+++++|+ +|+| +.+|+.++- .+.+.. ..|+... .+.+...|. |-.. . ...| .+++| .
T Consensus 67 ~~m~~~l~~-~g~~-~~~~~~P~v---~~~~~~---~~~~e~~~~g~~v~~~~g~----~~~~-~--~w~g~~~~~Dftn 131 (339)
T cd06604 67 KELIKELHE-QGFK-VVTIIDPGV---KVDPGY---DVYEEGLENDYFVKDPDGE----LYIG-R--VWPGLSAFPDFTN 131 (339)
T ss_pred HHHHHHHHH-CCCE-EEEEEeCce---eCCCCC---hHHHHHHHCCeEEECCCCC----EEEE-E--ecCCCccccCCCC
Confidence 999999999 6999 678877641 122221 1233221 000011111 1000 0 0012 12222 3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
++|+++|.+.++.+.+.|||++|.|.+-
T Consensus 132 p~a~~ww~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 132 PKVREWWGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred hHHHHHHHHHHHHHhhCCCceEeecCCC
Confidence 5788899988898889999999999864
No 26
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.48 E-value=1.9e-06 Score=90.94 Aligned_cols=204 Identities=14% Similarity=0.125 Sum_probs=113.3
Q ss_pred CCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-Ccc
Q 008551 2 PDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHK 80 (561)
Q Consensus 2 p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~K 80 (561)
|.+.=++=.|.|.. -|+++|++.++.+++.+||+..+.||++|+...+ +|.- .++
T Consensus 7 P~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~--------------------~f~~d~~~ 62 (339)
T cd06602 7 PYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRR--------------------DFTLDPVR 62 (339)
T ss_pred chHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCcc--------------------ceeccccc
Confidence 33433444566643 3789999999999999999999999999996532 2343 358
Q ss_pred cCCCCCCCCCCCCCccCH--HHHHHHHHHhcCCcEEEEEeeeccccCCcCCCC--CCcccccccc---cccCCCCCCCCC
Q 008551 81 FQKNGKEGQREEDPALGL--RHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGV--TGMEHYESKM---QYPVSSPGVQSN 153 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Gl--k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~--~~~~~y~~~~---~~~~~~~g~~~~ 153 (561)
||+ . +.+++++|+ .|+| +-+|..+. |.++. .....|+... .+-+...|.
T Consensus 63 FPd--------------p~~~~mi~~L~~-~G~k-~~~~i~P~-----v~~~~~~~~~~~~~e~~~~g~~v~~~~g~--- 118 (339)
T cd06602 63 FPG--------------LKMPEFVDELHA-NGQH-YVPILDPA-----ISANEPTGSYPPYDRGLEMDVFIKNDDGS--- 118 (339)
T ss_pred CCC--------------ccHHHHHHHHHH-CCCE-EEEEEeCc-----cccCcCCCCCHHHHHHHHCCeEEECCCCC---
Confidence 995 6 999999998 6999 77887653 54431 1112232211 000011111
Q ss_pred CCCccccccccCC----CCCCCHHHHHHHHHHHHHH-HHHcCCcEEEEccccchhhccCCCCCh-hhHHHHHHHHHHHHH
Q 008551 154 EPCDAFDSIAKNG----LGLVNPEKVFHFYDELHSY-LASAGIDGVKVDVQNILETLGAGHGGR-VKLSRKYHQALEASI 227 (561)
Q Consensus 154 ~pd~~~~~~~~~g----~g~~~p~~a~~fy~~~~~~-la~~GVD~vKvD~q~~~~~l~~~~~~~-~~~~~~y~~Al~~s~ 227 (561)
|-.. . ...| +.+.+ ++|.++|.+.++. +.+.|||++|.|.+-.... ..-+.-- -...++.++++++
T Consensus 119 -~~~~-~--~w~g~~~~~Dftn-p~a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~-~~~hN~y~~~~~~~~~~~~~~-- 190 (339)
T cd06602 119 -PYIG-K--VWPGYTVFPDFLN-PNTQEWWTDEIKDFHDQVPFDGLWIDMNEPSNF-YDVHNLYGLSEAIATYKALQS-- 190 (339)
T ss_pred -EEEE-E--eCCCCCcCcCCCC-HHHHHHHHHHHHHHHhcCCCcEEEecCCCCchH-hhhcchhhHHHHHHHHHHHHh--
Confidence 1000 0 0112 12334 4678888776665 5668999999998642111 0001000 1123333444433
Q ss_pred HhhCCCCceEeeccCCCCCCccccccCeEeecCCCCCCCcc
Q 008551 228 ARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPA 268 (561)
Q Consensus 228 ~~~f~g~~ii~cms~~~~~l~~~~~~~~~R~SdDf~p~~~~ 268 (561)
.-..|+.+.+-|.... ..+++. . -|.|....|..
T Consensus 191 --~~~~r~~~~sRs~~~G---~qry~~-~-w~GD~~s~W~~ 224 (339)
T cd06602 191 --IPGKRPFVISRSTFPG---SGRYAG-H-WLGDNASTWED 224 (339)
T ss_pred --cCCCCCEEEEecCccc---ccccce-e-ECCCccCCHHH
Confidence 2235678877765422 113332 2 35566655553
No 27
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.44 E-value=1.4e-06 Score=94.98 Aligned_cols=210 Identities=20% Similarity=0.262 Sum_probs=111.5
Q ss_pred CCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cc
Q 008551 2 PDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HK 80 (561)
Q Consensus 2 p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~K 80 (561)
|.+.=++=+|.|.. -|++.|++.++.+++.++|+..+.||++|+...+ +|.-| ++
T Consensus 26 P~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~--------------------~f~~d~~~ 81 (441)
T PF01055_consen 26 PRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYG--------------------DFTWDPER 81 (441)
T ss_dssp -GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTB--------------------TT-B-TTT
T ss_pred chhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccccccccc--------------------cccccccc
Confidence 33333443444443 5699999999999999999999999999998433 23434 58
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCD 157 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~ 157 (561)
|| +++.+++.+|+ .|+| +.+|..+. |..++...+.|+... ..-+..-| ++-.
T Consensus 82 FP--------------d~~~~~~~l~~-~G~~-~~~~~~P~-----v~~~~~~~~~~~~~~~~~~~v~~~~g----~~~~ 136 (441)
T PF01055_consen 82 FP--------------DPKQMIDELHD-QGIK-VVLWVHPF-----VSNDSPDYENYDEAKEKGYLVKNPDG----SPYI 136 (441)
T ss_dssp TT--------------THHHHHHHHHH-TT-E-EEEEEESE-----EETTTTB-HHHHHHHHTT-BEBCTTS----SB-E
T ss_pred cc--------------chHHHHHhHhh-CCcE-EEEEeecc-----cCCCCCcchhhhhHhhcCceeecccC----Cccc
Confidence 99 59999999999 6999 78998764 666654111232221 11011111 0000
Q ss_pred cccccccCC-CCCCC--HHHHHHHHHHHHHHHHHc-CCcEEEEccccchh-----hccC---CCCC------hhhHHHHH
Q 008551 158 AFDSIAKNG-LGLVN--PEKVFHFYDELHSYLASA-GIDGVKVDVQNILE-----TLGA---GHGG------RVKLSRKY 219 (561)
Q Consensus 158 ~~~~~~~~g-~g~~~--p~~a~~fy~~~~~~la~~-GVD~vKvD~q~~~~-----~l~~---~~~~------~~~~~~~y 219 (561)
... ..| .+++| .++++++|.+.++.+.+. |||++|.|.+-... .+.. .+.+ +-.....+
T Consensus 137 --~~~-w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~ 213 (441)
T PF01055_consen 137 --GRV-WPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWWLDFGEPSSFDSNNTLPEDAVHHDGYSGYEMHNLYGLLY 213 (441)
T ss_dssp --EEE-TTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEEEESTTTBSSTTTBSBCTTEECTTECEHHHHGGGHHHHH
T ss_pred --ccc-cCCcccccCCCChhHHHHHHHHHHHHHhccCCceEEeecCCcccccccccCcccceecCCCCchheeccccccc
Confidence 000 111 12232 356889987777767776 99999999854321 0110 1111 11122233
Q ss_pred HHHHHHHHHhhC-CCCceEeeccCCCCCCccccccCeEeecCCCCCCCcc
Q 008551 220 HQALEASIARNF-RNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPA 268 (561)
Q Consensus 220 ~~Al~~s~~~~f-~g~~ii~cms~~~~~l~~~~~~~~~R~SdDf~p~~~~ 268 (561)
.++....+++.. ..++++.|-|.+.. ..+++.. -+.|..-.|..
T Consensus 214 ~~~~~~~~~~~~~~~r~~~~sRs~~~G---~qr~~~~--w~GD~~s~w~~ 258 (441)
T PF01055_consen 214 AKATYEALREIDPNKRPFIFSRSGWAG---SQRYGGH--WSGDNSSSWDG 258 (441)
T ss_dssp HHHHHHHHHHHSTTSC-EEEESSEETT---GGGTCEE--EECSSBSSHHH
T ss_pred hhhhhhhhhhccCCCCcceeecccCCC---CCcccee--ecccccccHHH
Confidence 444444333322 35678888775432 1133444 36677666644
No 28
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.39 E-value=4.4e-06 Score=87.45 Aligned_cols=180 Identities=14% Similarity=0.177 Sum_probs=102.2
Q ss_pred CccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCC
Q 008551 7 WFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGK 86 (561)
Q Consensus 7 ~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~ 86 (561)
++=.|.|.. -|+++|++.++.+++.+||...|.||++|++..++ + .| ..++||+
T Consensus 12 G~~~sr~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-----------------f-~~-d~~~FPd--- 65 (317)
T cd06600 12 GYHISRYSY----YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL-----------------F-TW-DPYRFPE--- 65 (317)
T ss_pred HHHhcCCCC----CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc-----------------e-ee-chhcCCC---
Confidence 333455552 37999999999999999999999999999864321 1 12 2458994
Q ss_pred CCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCccccccc
Q 008551 87 EGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSIA 163 (561)
Q Consensus 87 ~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~~ 163 (561)
.+.+++++|+ .|+| +-+|..+. |.++.. ...|.... .+-+...| .|-.. . .
T Consensus 66 -----------p~~~i~~l~~-~g~k-~~~~~~P~-----i~~~~~-~~~~~~~~~~~~~v~~~~g----~~~~~-~--~ 119 (317)
T cd06600 66 -----------PKKLIDELHK-RNVK-LVTIVDPG-----IRVDQN-YSPFLSGMDKGKFCEIESG----ELFVG-K--M 119 (317)
T ss_pred -----------HHHHHHHHHH-CCCE-EEEEeecc-----ccCCCC-ChHHHHHHHCCEEEECCCC----CeEEE-e--e
Confidence 8999999999 6999 77887653 554421 11222110 00000011 11000 0 0
Q ss_pred cCCCC-CCC--HHHHHHHHHHHHHHHH-HcCCcEEEEccccchhhccCCCCC-hhhHHHHHHHHHHHHHHhhC-CCCceE
Q 008551 164 KNGLG-LVN--PEKVFHFYDELHSYLA-SAGIDGVKVDVQNILETLGAGHGG-RVKLSRKYHQALEASIARNF-RNNDII 237 (561)
Q Consensus 164 ~~g~g-~~~--p~~a~~fy~~~~~~la-~~GVD~vKvD~q~~~~~l~~~~~~-~~~~~~~y~~Al~~s~~~~f-~g~~ii 237 (561)
..|.+ ++| .++|.++|.+.++.+. +.|||++|.|.+-.... .+-+.- .....++.+++++ +.+ ..|+++
T Consensus 120 w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~-~~~hn~y~~~~~~a~~~~~~----~~~~~~r~~~ 194 (317)
T cd06600 120 WPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDF-EKVHNLYGLYEAMATAEGFR----TSHPRNRIFI 194 (317)
T ss_pred cCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCCCccH-HHhcchhhHHHHHHHHHHHH----HhcCCCCceE
Confidence 12221 222 3567778877666554 89999999998542110 000100 0122333444444 333 356788
Q ss_pred eeccCC
Q 008551 238 CCMSHN 243 (561)
Q Consensus 238 ~cms~~ 243 (561)
.+-|..
T Consensus 195 ~sRs~~ 200 (317)
T cd06600 195 LTRSGF 200 (317)
T ss_pred EEeccc
Confidence 877754
No 29
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.31 E-value=3.8e-06 Score=88.35 Aligned_cols=123 Identities=16% Similarity=0.191 Sum_probs=86.1
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQ 82 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP 82 (561)
+.=++-.|.|.. -|+++|++.++.+++.+||+..+.||+.|++..+ +|.- .++||
T Consensus 9 WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~--------------------~Ft~d~~~FP 64 (332)
T cd06601 9 YALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYR--------------------TFTTNGGGFP 64 (332)
T ss_pred HHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCC--------------------ceeecCCCCC
Confidence 333444566653 3899999999999999999999999999996432 2343 46899
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccccc
Q 008551 83 KNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSI 162 (561)
Q Consensus 83 ~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~ 162 (561)
+ .+.++++||+ .|+| +.+|.-+. |. |.. +.+ .++ .-||.
T Consensus 65 d--------------p~~mv~~L~~-~G~k-lv~~i~P~-----i~--------~g~--~~~--~~~---~~pDf----- 103 (332)
T cd06601 65 N--------------PKEMFDNLHN-KGLK-CSTNITPV-----IS--------YGG--GLG--SPG---LYPDL----- 103 (332)
T ss_pred C--------------HHHHHHHHHH-CCCe-EEEEecCc-----ee--------cCc--cCC--CCc---eeeCC-----
Confidence 5 8999999998 6999 55653321 21 111 111 011 11221
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccc
Q 008551 163 AKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQ 199 (561)
Q Consensus 163 ~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q 199 (561)
. .++++++|.+.++.|.+.|||+++.|.+
T Consensus 104 -------t-np~ar~wW~~~~~~l~~~Gv~~~W~Dmn 132 (332)
T cd06601 104 -------G-RPDVREWWGNQYKYLFDIGLEFVWQDMT 132 (332)
T ss_pred -------C-CHHHHHHHHHHHHHHHhCCCceeecCCC
Confidence 2 3578889999999999999999999975
No 30
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=98.26 E-value=9.8e-06 Score=82.50 Aligned_cols=125 Identities=22% Similarity=0.350 Sum_probs=78.9
Q ss_pred hccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCc
Q 008551 16 FYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPA 95 (561)
Q Consensus 16 ~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~ 95 (561)
|...+|-+..++-+|-.++.|++ |++||+||.....+.. + ++. +.-|.
T Consensus 25 ~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~-----------~-----d~~--~~~~~------------ 72 (273)
T PF10566_consen 25 FKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD-----------F-----DFT--KPIPD------------ 72 (273)
T ss_dssp S-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT------------------TT---B-TT------------
T ss_pred CcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc-----------c-----ccc--ccCCc------------
Confidence 45578999999999999999999 9999999986332211 0 111 11121
Q ss_pred cCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHH
Q 008551 96 LGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKV 175 (561)
Q Consensus 96 ~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a 175 (561)
..|+.+++|.|+| |++ |-+|-.-.++|+.. +-+-
T Consensus 73 ~dl~elv~Ya~~K-gVg-i~lw~~~~~~~~~~--------------------------------------------~~~~ 106 (273)
T PF10566_consen 73 FDLPELVDYAKEK-GVG-IWLWYHSETGGNVA--------------------------------------------NLEK 106 (273)
T ss_dssp --HHHHHHHHHHT-T-E-EEEEEECCHTTBHH--------------------------------------------HHHC
T ss_pred cCHHHHHHHHHHc-CCC-EEEEEeCCcchhhH--------------------------------------------hHHH
Confidence 2699999999995 988 77774422211100 0011
Q ss_pred HHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHh
Q 008551 176 FHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIAR 229 (561)
Q Consensus 176 ~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~ 229 (561)
+ .+..++.+++|||.+||+|+... ...+..+-|++.++++++.
T Consensus 107 ~--~~~~f~~~~~~Gv~GvKidF~~~---------d~Q~~v~~y~~i~~~AA~~ 149 (273)
T PF10566_consen 107 Q--LDEAFKLYAKWGVKGVKIDFMDR---------DDQEMVNWYEDILEDAAEY 149 (273)
T ss_dssp C--HHHHHHHHHHCTEEEEEEE--SS---------TSHHHHHHHHHHHHHHHHT
T ss_pred H--HHHHHHHHHHcCCCEEeeCcCCC---------CCHHHHHHHHHHHHHHHHc
Confidence 1 26778889999999999998542 2345677788888887543
No 31
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=98.19 E-value=4e-06 Score=88.58 Aligned_cols=141 Identities=17% Similarity=0.145 Sum_probs=87.7
Q ss_pred CccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCC
Q 008551 7 WFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNG 85 (561)
Q Consensus 7 ~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~ 85 (561)
++=+|.|. --|+++|++.++.+++.+||+..|.||+.|+...+ +|.- .+|||+
T Consensus 12 G~~~sr~~----y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~--------------------~f~~d~~~FPd-- 65 (339)
T cd06603 12 GYHQCRWN----YKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKR--------------------YFTWDKKKFPD-- 65 (339)
T ss_pred HHHhcCCC----CCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCC--------------------ceEeCcccCCC--
Confidence 34445544 34899999999999999999999999999985322 1332 468995
Q ss_pred CCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCcccccc
Q 008551 86 KEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSI 162 (561)
Q Consensus 86 ~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~ 162 (561)
.+.+++++|+ .|+| +-+|..++ |..+. ....|+... .+.+...| ++ ....
T Consensus 66 ------------p~~mi~~L~~-~G~k-~~~~~~P~-----v~~~~-~~~~y~e~~~~g~~vk~~~g----~~-~~~~-- 118 (339)
T cd06603 66 ------------PEKMQEKLAS-KGRK-LVTIVDPH-----IKRDD-GYYVYKEAKDKGYLVKNSDG----GD-FEGW-- 118 (339)
T ss_pred ------------HHHHHHHHHH-CCCE-EEEEecCc-----eecCC-CCHHHHHHHHCCeEEECCCC----CE-EEEE--
Confidence 8999999999 6999 67886653 44331 112233221 11111111 01 0000
Q ss_pred ccCCC-CCCC--HHHHHHHHHHHHHHHH---HcCCcEEEEcccc
Q 008551 163 AKNGL-GLVN--PEKVFHFYDELHSYLA---SAGIDGVKVDVQN 200 (561)
Q Consensus 163 ~~~g~-g~~~--p~~a~~fy~~~~~~la---~~GVD~vKvD~q~ 200 (561)
...|. +++| .++|.++|.+.++.+. +.|+|+++.|.+-
T Consensus 119 ~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 119 CWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred ECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 01121 2233 3578888888777665 4699999999763
No 32
>PRK10426 alpha-glucosidase; Provisional
Probab=98.17 E-value=2.9e-05 Score=88.46 Aligned_cols=137 Identities=15% Similarity=0.270 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCccccccccccccc-ccCcccC-cccCCCCCCCCCCCCCccCH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANR-LTHIKEN-HKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~-~KFP~~~~~~~~~~~~~~Gl 98 (561)
++++|++.++.+++.|||+..|.||| |+...... |+.+ +.+|.-+ ++|| ..
T Consensus 219 ~~~~v~~v~~~~r~~~IP~d~i~ldd-w~~~~~~~------------~g~~~~~~~~~d~~~FP--------------dp 271 (635)
T PRK10426 219 GTEVVQKKLDTMRNAGVKVNGIWAQD-WSGIRMTS------------FGKRLMWNWKWDSERYP--------------QL 271 (635)
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEec-cccccccc------------ccccccccceEChhhCC--------------CH
Confidence 57899999999999999999999985 98643211 1111 3345544 6899 49
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCccccccccCC-CCCCC--H
Q 008551 99 RHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSIAKNG-LGLVN--P 172 (561)
Q Consensus 99 k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~~~~g-~g~~~--p 172 (561)
+.+++++|+ .|+| +-+|.-+ +|.++.+. |+... ...+...|. + ...+. ..+ -+++| .
T Consensus 272 ~~mi~~L~~-~G~k-~v~~i~P-----~v~~~~~~---y~e~~~~gy~vk~~~g~----~-~~~~~--~~~~~~~~Dftn 334 (635)
T PRK10426 272 DSRIKQLNE-EGIQ-FLGYINP-----YLASDGDL---CEEAAEKGYLAKDADGG----D-YLVEF--GEFYAGVVDLTN 334 (635)
T ss_pred HHHHHHHHH-CCCE-EEEEEcC-----ccCCCCHH---HHHHHHCCcEEECCCCC----E-EEeEe--cCCCceeecCCC
Confidence 999999999 6999 5677544 35554432 43321 111111111 0 00000 011 12222 3
Q ss_pred HHHHHHHHH-HHHHHHHcCCcEEEEccccc
Q 008551 173 EKVFHFYDE-LHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 173 ~~a~~fy~~-~~~~la~~GVD~vKvD~q~~ 201 (561)
++|+++|.+ +.+.+.+.|||++|.|..-.
T Consensus 335 p~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~ 364 (635)
T PRK10426 335 PEAYEWFKEVIKKNMIGLGCSGWMADFGEY 364 (635)
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEeeeCCCC
Confidence 567778755 55789999999999998653
No 33
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00023 Score=82.53 Aligned_cols=205 Identities=16% Similarity=0.185 Sum_probs=121.3
Q ss_pred ccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCC-cccCCCCCCCCcccccccccccccccCcccC-cccCCCC
Q 008551 8 FGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDG-WQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKNG 85 (561)
Q Consensus 8 ~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDG-WQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~~ 85 (561)
|| |.|-+.+..-+|+.+.+.++..++..||+..+.+|-. |-+. +..|.-| .+||+
T Consensus 266 ~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD~~~~~~~--------------------~~~F~wd~~~FP~-- 322 (772)
T COG1501 266 LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDN--------------------WGDFTWDPDRFPD-- 322 (772)
T ss_pred cC-CCceeccccccHHHHHHHHhhcccccCcceEEEEeehhhhcc--------------------ccceEECcccCCC--
Confidence 55 6777777888999999999999999999999999987 7651 2345555 58995
Q ss_pred CCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccC
Q 008551 86 KEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKN 165 (561)
Q Consensus 86 ~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~ 165 (561)
.+.+++++|+ .|+| +-+|.-+ .|..+.+..+.-..+-..-+..-|.... ++.. ..
T Consensus 323 ------------pk~mi~~l~~-~Gik-l~~~i~P-----~i~~d~~~~~e~~~~Gy~~k~~~g~~~~-----~~~w-~~ 377 (772)
T COG1501 323 ------------PKQMIAELHE-KGIK-LIVIINP-----YIKQDSPLFKEAIEKGYFVKDPDGEIYQ-----ADFW-PG 377 (772)
T ss_pred ------------HHHHHHHHHh-cCce-EEEEecc-----ccccCCchHHHHHHCCeEEECCCCCEee-----eccc-CC
Confidence 7899999999 6999 4555444 3555543321111111110010111111 1111 01
Q ss_pred CCCCCC--HHHHHHHHH-HHHHHHHHcCCcEEEEccccchhhcc--CCCCChh---------hHHHHHHHHHHHHHHhhC
Q 008551 166 GLGLVN--PEKVFHFYD-ELHSYLASAGIDGVKVDVQNILETLG--AGHGGRV---------KLSRKYHQALEASIARNF 231 (561)
Q Consensus 166 g~g~~~--p~~a~~fy~-~~~~~la~~GVD~vKvD~q~~~~~l~--~~~~~~~---------~~~~~y~~Al~~s~~~~f 231 (561)
...++| .++|+++|- ..++.|.+-|||+.|.|++-..-... .+.+... -.++++++|++... -
T Consensus 378 ~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~---~ 454 (772)
T COG1501 378 NSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELG---G 454 (772)
T ss_pred cccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCccccccccccccCHHHHhcchhHHHHHHHHHHHHhhc---C
Confidence 122333 367888888 68888999999999999975322211 1111111 23445555655431 1
Q ss_pred CCCceEeeccCCCCCCccccccCeEeecCCCCCCCcc
Q 008551 232 RNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPA 268 (561)
Q Consensus 232 ~g~~ii~cms~~~~~l~~~~~~~~~R~SdDf~p~~~~ 268 (561)
..|++|.+=|.+... ...+.+| |.|.-..|..
T Consensus 455 ~~r~~~lsRsg~aG~---Q~~~~~W--sGD~~s~wd~ 486 (772)
T COG1501 455 NERPFILSRSGYAGS---QRYAAHW--SGDNRSSWDS 486 (772)
T ss_pred CCceEEEEecccccc---eecccee--CCccccchHH
Confidence 257788887765421 1223333 5666666644
No 34
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=97.78 E-value=0.00014 Score=85.40 Aligned_cols=146 Identities=17% Similarity=0.301 Sum_probs=90.3
Q ss_pred CCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-Ccc
Q 008551 2 PDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHK 80 (561)
Q Consensus 2 p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~K 80 (561)
|.+.=++=+|.|.. -|+++|++.++.+++.+||...+.+|..|+...+ .|.- .++
T Consensus 184 P~WALGy~qSR~~Y----~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~--------------------~FTwD~~r 239 (978)
T PLN02763 184 PKWALGYQQCRWSY----ESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFR--------------------CFTFDKER 239 (978)
T ss_pred chHHhheeeccCCC----CCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCC--------------------ceeECccc
Confidence 34443444566663 3789999999999999999999999999975321 2333 358
Q ss_pred cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCc
Q 008551 81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCD 157 (561)
Q Consensus 81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~ 157 (561)
||+ .+.+++++|+ .|+|. +|..- .||..+. ....|+... ++-+...|. |-.
T Consensus 240 FPd--------------P~~mv~~Lh~-~G~kv--v~iid----PgI~~d~-gY~~y~eg~~~~~fvk~~~G~----~y~ 293 (978)
T PLN02763 240 FPD--------------PKGLADDLHS-IGFKA--IWMLD----PGIKAEE-GYFVYDSGCENDVWIQTADGK----PFV 293 (978)
T ss_pred CCC--------------HHHHHHHHHH-CCCEE--EEEEc----CCCccCC-CCHHHHhHhhcCeeEECCCCC----eeE
Confidence 994 8999999999 69994 44321 2454331 112222211 000000110 000
Q ss_pred cccccccCCCC-CCC--HHHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 158 AFDSIAKNGLG-LVN--PEKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 158 ~~~~~~~~g~g-~~~--p~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
. ....|.. ++| .++|++||.+.++.|.+.|||+++.|.+-
T Consensus 294 G---~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 294 G---EVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred e---eecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCC
Confidence 0 0011211 222 46789999999999999999999999864
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=95.64 E-value=0.082 Score=60.86 Aligned_cols=142 Identities=18% Similarity=0.272 Sum_probs=87.0
Q ss_pred ccchhhhc--cCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-cccCCCCC
Q 008551 10 WCTWDAFY--TDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQKNGK 86 (561)
Q Consensus 10 WcTW~a~~--~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KFP~~~~ 86 (561)
|..|..+. --.|.+.+++-++.+.+.|||...+.+|+-|++..+| |-.+ .+||
T Consensus 296 WslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykD--------------------FTvd~~~fp---- 351 (805)
T KOG1065|consen 296 WSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKD--------------------FTVDKVWFP---- 351 (805)
T ss_pred hhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccc--------------------eeeccccCc----
Confidence 55555444 2578899999999999999999999999999987654 4444 5899
Q ss_pred CCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccc---cccCCCCCCCCCCCCccccccc
Q 008551 87 EGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKM---QYPVSSPGVQSNEPCDAFDSIA 163 (561)
Q Consensus 87 ~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~---~~~~~~~g~~~~~pd~~~~~~~ 163 (561)
+|+.+++.||+ .|+|+| +|.-+ +|+-++. ...|+... +.-..+-|. +.+-.+ .
T Consensus 352 ----------~~~~fv~~Lh~-~G~kyv-liidP-----~is~~~~-y~~y~~g~~~~v~I~~~~g~----~~~lg~--v 407 (805)
T KOG1065|consen 352 ----------DLKDFVDDLHA-RGFKYV-LIIDP-----FISTNSS-YGPYDRGVAKDVLIKNREGS----PKMLGE--V 407 (805)
T ss_pred ----------chHHHHHHHHh-CCCeEE-EEeCC-----ccccCcc-chhhhhhhhhceeeecccCc----hhhhcc--c
Confidence 59999999999 699975 44333 3444432 11232221 111111111 100000 0
Q ss_pred cCC----CCCCCHHHHHHHHHHHHH-HHHHcCCcEEEEcccc
Q 008551 164 KNG----LGLVNPEKVFHFYDELHS-YLASAGIDGVKVDVQN 200 (561)
Q Consensus 164 ~~g----~g~~~p~~a~~fy~~~~~-~la~~GVD~vKvD~q~ 200 (561)
..| ...++| .+..+|.+-++ +=.+-++|++++|...
T Consensus 408 wP~~~~fpDftnp-~~~~Ww~~~~~~fh~~vp~dg~wiDmnE 448 (805)
T KOG1065|consen 408 WPGSTAFPDFTNP-AVVEWWLDELKRFHDEVPFDGFWIDMNE 448 (805)
T ss_pred CCCcccccccCCc-hHHHHHHHHHHhhcccCCccceEEECCC
Confidence 112 113455 55666655444 4455799999999854
No 36
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=91.37 E-value=9.8 Score=43.71 Aligned_cols=142 Identities=13% Similarity=0.113 Sum_probs=71.4
Q ss_pred CCHHHHHHHH-HHHHhCCCCCcEEEE-eCCcccCCCCCCCCcccccccccccccccCcc-cCcccCCCCCCCCCCCCCcc
Q 008551 20 VTGEGVKQGL-ESFEKGGIPPKFIII-DDGWQSVGMDPSGFEFRADNTANFANRLTHIK-ENHKFQKNGKEGQREEDPAL 96 (561)
Q Consensus 20 vte~~i~~~~-~~L~~~Gi~~~~viI-DDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~KFP~~~~~~~~~~~~~~ 96 (561)
-|-++|.+.+ +.|++.|+. .|.| --..+..... ++..-.++- .+++|.. +.
T Consensus 153 g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~-------------wGY~~~~y~~~~~~~Gt-----------~~ 206 (613)
T TIGR01515 153 LSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGS-------------WGYQVTGYYAPTSRFGT-----------PD 206 (613)
T ss_pred CCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCC-------------CCCCcccCcccccccCC-----------HH
Confidence 4678888886 999999998 5444 2121111000 001112222 3557753 35
Q ss_pred CHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHH
Q 008551 97 GLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVF 176 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a~ 176 (561)
.||.||+.+|+ .||+ |-+...+.= ..++......+...-.+....+. ....+.| +. ..+.. ..+.++
T Consensus 207 dlk~lV~~~H~-~Gi~-VilD~V~NH----~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~w--~~---~~~~~-~~~~Vr 273 (613)
T TIGR01515 207 DFMYFVDACHQ-AGIG-VILDWVPGH----FPKDDHGLAEFDGTPLYEHKDPR-DGEHWDW--GT---LIFDY-GRPEVR 273 (613)
T ss_pred HHHHHHHHHHH-CCCE-EEEEecccC----cCCccchhhccCCCcceeccCCc-cCcCCCC--CC---ceecC-CCHHHH
Confidence 79999999999 6999 666543320 11221111111110000000000 0011111 10 00111 246788
Q ss_pred HHHHHHHHHHH-HcCCcEEEEcccc
Q 008551 177 HFYDELHSYLA-SAGIDGVKVDVQN 200 (561)
Q Consensus 177 ~fy~~~~~~la-~~GVD~vKvD~q~ 200 (561)
+|.-+..+++. +.|||++.+|+..
T Consensus 274 ~~l~~~~~~W~~ey~iDG~R~D~v~ 298 (613)
T TIGR01515 274 NFLVANALYWAEFYHIDGLRVDAVA 298 (613)
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCHH
Confidence 88877777665 6899999999854
No 37
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=88.52 E-value=15 Score=38.62 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCC----cccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCcc
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDG----WQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPAL 96 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDG----WQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~ 96 (561)
+++.+.+.++.+++.++. .|+||=- .-.-..+ .. -.....+..++. .
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s~-------------~~-~~~~~ga~~~~i-------------~ 61 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDSQ-------------VP-LAREIGAVKPYI-------------K 61 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecCC-------------Cc-hhhhcccccccc-------------c
Confidence 567888899999999999 9999622 1111000 00 000111222331 3
Q ss_pred CHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccc------cCCCCCC
Q 008551 97 GLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA------KNGLGLV 170 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~------~~g~g~~ 170 (561)
.++.+++.+|+ +||.- =-|...| -+...+ ...|+|++.... ..|..-+
T Consensus 62 D~~~l~~~l~e-~gIY~-IARIv~F-------kD~~la-----------------~~~pe~av~~~~G~~w~d~~~~~Wv 115 (316)
T PF13200_consen 62 DLKALVKKLKE-HGIYP-IARIVVF-------KDPVLA-----------------EAHPEWAVKTKDGSVWRDNEGEAWV 115 (316)
T ss_pred CHHHHHHHHHH-CCCEE-EEEEEEe-------cChHHh-----------------hhChhhEEECCCCCcccCCCCCccC
Confidence 79999999999 68873 2333322 121111 123444431110 1233346
Q ss_pred CH--HHHHHHHHHHHHHHHHcCCcEEEEccccch
Q 008551 171 NP--EKVFHFYDELHSYLASAGIDGVKVDVQNIL 202 (561)
Q Consensus 171 ~p--~~a~~fy~~~~~~la~~GVD~vKvD~q~~~ 202 (561)
+| +.+.+|--++.+.+++.|||-|-.|...+-
T Consensus 116 nP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP 149 (316)
T PF13200_consen 116 NPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIRFP 149 (316)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCEEEeeeeecC
Confidence 65 789999999999999999999999987643
No 38
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=86.64 E-value=18 Score=36.97 Aligned_cols=160 Identities=15% Similarity=0.235 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRH 100 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~ 100 (561)
+...+.+.++..++..+|.+|+|-+||.+... - -|+.
T Consensus 43 ~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y-----------------------------~--------------~l~~ 79 (261)
T cd06596 43 TTDDARKVADKYKENDMPLGWMLPNDGYGCGY-----------------------------E--------------NLKE 79 (261)
T ss_pred chhhHHHHHHHHHhcCCCceeeccCCCCcchH-----------------------------H--------------HHHH
Confidence 34567888899999999999999999987531 0 4899
Q ss_pred HHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHHHHHH
Q 008551 101 IVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180 (561)
Q Consensus 101 lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a~~fy~ 180 (561)
+++++++ .|++ .|+| ....+ +
T Consensus 80 ~~~~~~~-~g~~-~glw-----------t~~~l----------------------------------------------~ 100 (261)
T cd06596 80 VVDYLHA-NGVE-TGLW-----------TQSGL----------------------------------------------R 100 (261)
T ss_pred HHHHHHH-cCCc-cccc-----------cccch----------------------------------------------h
Confidence 9999998 6999 6766 11100 1
Q ss_pred HHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCCCCccccccCeEeecC
Q 008551 181 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASD 260 (561)
Q Consensus 181 ~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~~~~~l~~~~~~~~~R~Sd 260 (561)
++.+.....|+.+.|+|.... +.++.=.....++.+++++. +-..|++|.+.|.+.-. .+++.. =|.
T Consensus 101 ~~~~ev~~~g~~~~k~Dv~w~----g~gy~~~l~~~ka~yeg~~~----~~~~RpfiltRsg~aGs---QRy~~~--WsG 167 (261)
T cd06596 101 DIAKEVGAAGVRARKTDVAWV----GAGYSFALNGVKAAADGIES----NSNARPFIVTVDGWAGT---QRYAGI--WTG 167 (261)
T ss_pred hhhhhhccCCceEEeccchhh----ccchhHHHHHHHHHHHHHHh----CCCCCCEEEEecCcccc---CCCCCc--cCC
Confidence 111123557999999998653 22221123345555666543 23467888888765321 133332 366
Q ss_pred CCCCCCccchhHHHHHHhhhhhhhcC-CCCCCCccCcc
Q 008551 261 DFWPRDPASHTIHIASVAYNTIFLGE-FMQPDWDMFHS 297 (561)
Q Consensus 261 Df~p~~~~~~~~hi~~~a~nsl~~~~-~~~pD~DMf~s 297 (561)
|....|..+ +.+|.... +.-+.|. ..=+|.+=|.-
T Consensus 168 D~~stWe~L-r~sI~~~L-~~gLsG~p~~G~DIGGF~g 203 (261)
T cd06596 168 DQSGSWEYI-RFHIPTYI-GSGLSGQPNTTSDVDGIFG 203 (261)
T ss_pred CCcCcHHHH-HHHHHHHH-HHHhcCCCcCccccCcCCC
Confidence 777777553 33443322 2223343 34556665543
No 39
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=80.90 E-value=19 Score=40.85 Aligned_cols=31 Identities=26% Similarity=0.497 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEccccch
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQNIL 202 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~ 202 (561)
.+.++++..+..+++.+.|||++-+|+...+
T Consensus 175 np~V~~~l~~~~~~W~~~GvDGfRlDa~~~i 205 (551)
T PRK10933 175 NPAVRAELKKVCEFWADRGVDGLRLDVVNLI 205 (551)
T ss_pred CHHHHHHHHHHHHHHHHCCCcEEEEcchhhc
Confidence 3678888888999988999999999986654
No 40
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=80.62 E-value=22 Score=37.48 Aligned_cols=70 Identities=20% Similarity=0.157 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCH
Q 008551 19 DVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 19 ~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Gl 98 (561)
.+|+ ...+-.+..+++|+- .+|+-...-+...... .+.+. +..++..| +|
T Consensus 30 ~~~~-~~~~~y~~rA~gg~g--lii~~~~~v~~~~~~~------------~~~~~-~~~d~~~~--------------~~ 79 (336)
T cd02932 30 VATD-WHLVHYGSRALGGAG--LVIVEATAVSPEGRIT------------PGDLG-LWNDEQIE--------------AL 79 (336)
T ss_pred CCCH-HHHHHHHHHHcCCCc--EEEEcceEECCCcCCC------------CCcee-ecCHHHHH--------------HH
Confidence 4565 555677778888887 6666544433221100 00111 11222344 89
Q ss_pred HHHHHHHHHhcCCc-EEEEEee
Q 008551 99 RHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 99 k~lv~~i~~~~Glk-~vgvWha 119 (561)
+.+++.+|+ +|-| .+=+||+
T Consensus 80 ~~l~~~vh~-~G~~~~~QL~H~ 100 (336)
T cd02932 80 KRIVDFIHS-QGAKIGIQLAHA 100 (336)
T ss_pred HHHHHHHHh-cCCcEEEEccCC
Confidence 999999999 7966 5677884
No 41
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=78.18 E-value=58 Score=36.77 Aligned_cols=30 Identities=17% Similarity=0.353 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
.+.+++|.-+..+++.+.|||++-+|+...
T Consensus 172 np~vr~~l~~~~~~w~~~GvDGfRlDav~~ 201 (539)
T TIGR02456 172 NPAVHDAVHDVMRFWLDLGVDGFRLDAVPY 201 (539)
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEecHHh
Confidence 357888888888888889999999998654
No 42
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=78.09 E-value=45 Score=35.35 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCH
Q 008551 19 DVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 19 ~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Gl 98 (561)
.+|+ ..++--+..+++|+- .+|.....-+...... .+.+. +..++..| +|
T Consensus 30 ~~t~-~~~~~y~~~A~gG~G--lIi~e~~~v~~~~~~~------------~~~~~-l~~d~~i~--------------~~ 79 (343)
T cd04734 30 LPSE-RYIAYHEERARGGAG--LIITEGSSVHPSDSPA------------FGNLN-ASDDEIIP--------------GF 79 (343)
T ss_pred CCCH-HHHHHHHHHHhCCCC--EEEEeeeeeCCcccCC------------CCccc-cCCHHHHH--------------HH
Confidence 4566 455666778888887 6776555533322111 00111 11112234 89
Q ss_pred HHHHHHHHHhcCCc-EEEEEee
Q 008551 99 RHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 99 k~lv~~i~~~~Glk-~vgvWha 119 (561)
+.+++.+|+ +|-+ .+=+||+
T Consensus 80 ~~l~~~vh~-~g~~~~~Ql~H~ 100 (343)
T cd04734 80 RRLAEAVHA-HGAVIMIQLTHL 100 (343)
T ss_pred HHHHHHHHh-cCCeEEEeccCC
Confidence 999999999 7955 4667885
No 43
>PRK10785 maltodextrin glucosidase; Provisional
Probab=77.55 E-value=66 Score=36.88 Aligned_cols=64 Identities=8% Similarity=0.173 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCCCCCCCCCCCCCccCHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~~~~~~~~~~~~~~Glk 99 (561)
+=++|.+.|+.|++.|+. .|-| .+--... +.++..-.++.. ++.|.. ...|+
T Consensus 177 Dl~GI~~kLdYL~~LGv~--~I~L-----~Pif~s~---------s~hgYd~~Dy~~iDp~~Gt-----------~~df~ 229 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVT--ALYL-----NPIFTAP---------SVHKYDTEDYRHVDPQLGG-----------DAALL 229 (598)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEe-----CCcccCC---------CCCCcCcccccccCcccCC-----------HHHHH
Confidence 458999999999999998 3322 2211100 001111234443 566753 24799
Q ss_pred HHHHHHHHhcCCc
Q 008551 100 HIVTEIKEKHDLK 112 (561)
Q Consensus 100 ~lv~~i~~~~Glk 112 (561)
.||+.+|+ .|||
T Consensus 230 ~Lv~~aH~-rGik 241 (598)
T PRK10785 230 RLRHATQQ-RGMR 241 (598)
T ss_pred HHHHHHHH-CCCE
Confidence 99999999 5999
No 44
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=75.62 E-value=41 Score=35.22 Aligned_cols=142 Identities=15% Similarity=0.195 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRH 100 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~ 100 (561)
+++++.+.++.|++.|+. .|+++=-+. ++.-.+ +. +.+-.++..... .....-.=|+.
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~qVr~~---gda~Y~-------S~-------~~p~s~~~~g~~---~~~pg~DpL~~ 74 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQVRPR---GDALYP-------SD-------IEPWSGYLTGKQ---GKDPGFDPLEF 74 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEEEeC---cEEEec-------cc-------ccccccccCCCC---CCCCCccHHHH
Confidence 889999999999999988 555532221 110000 00 111111110000 00000113899
Q ss_pred HHHHHHHhcCCcEEEEEeeeccccCCcC--CCCCCcccccccccccCCCCCCCCCCCCcccccc-ccCCCCCCCH--HHH
Q 008551 101 IVTEIKEKHDLKYVYVWHAITGYWGGVR--PGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSI-AKNGLGLVNP--EKV 175 (561)
Q Consensus 101 lv~~i~~~~Glk~vgvWhal~GyW~GI~--p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~-~~~g~g~~~p--~~a 175 (561)
++++.|+ .||+ |--|..+ |+. +.+...+..... .....+++..... ..++...++| +++
T Consensus 75 ~I~eaHk-rGle-vHAW~~~-----~~~~~~~~~~~~~~p~~---------~~~~~~~~~~~~~~~~~~~~~lnP~~PeV 138 (311)
T PF02638_consen 75 MIEEAHK-RGLE-VHAWFRV-----GFNAPDVSHILKKHPEW---------FAVNHPGWVRTYEDANGGYYWLNPGHPEV 138 (311)
T ss_pred HHHHHHH-cCCE-EEEEEEe-----ecCCCchhhhhhcCchh---------heecCCCceeecccCCCCceEECCCCHHH
Confidence 9999998 5999 7777622 111 111111111111 1112233321110 0122334554 789
Q ss_pred HHHHHHHHHHH-HHcCCcEEEEcccc
Q 008551 176 FHFYDELHSYL-ASAGIDGVKVDVQN 200 (561)
Q Consensus 176 ~~fy~~~~~~l-a~~GVD~vKvD~q~ 200 (561)
++|.-++.+-+ +...||+|-.|...
T Consensus 139 r~~i~~~v~Eiv~~YdvDGIhlDdy~ 164 (311)
T PF02638_consen 139 RDYIIDIVKEIVKNYDVDGIHLDDYF 164 (311)
T ss_pred HHHHHHHHHHHHhcCCCCeEEecccc
Confidence 99987776655 56899999999643
No 45
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=72.02 E-value=45 Score=34.77 Aligned_cols=64 Identities=16% Similarity=0.271 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccC
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSH 242 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~ 242 (561)
+.....|.+.+.+++.++|+|+|=+|+-... ...+..+....+.+.|+. +++.++ ...+.++++
T Consensus 92 ~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~-----~~~~~~~~~~~~~~~lk~-lr~~~~-~~~~lT~AP 155 (312)
T cd02871 92 TAQEDNFVDSIVAIIKEYGFDGLDIDLESGS-----NPLNATPVITNLISALKQ-LKDHYG-PNFILTMAP 155 (312)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecccCC-----ccCCcHHHHHHHHHHHHH-HHHHcC-CCeEEEECC
Confidence 5678899999999999999999999986531 111112334455555554 355554 367878875
No 46
>PRK14705 glycogen branching enzyme; Provisional
Probab=71.47 E-value=1.7e+02 Score=36.51 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHH-HHHcCCcEEEEccccchhhc----------cCCCCChhh-HHHHHHHHHHHHHHhhCCCCceEee
Q 008551 172 PEKVFHFYDELHSY-LASAGIDGVKVDVQNILETL----------GAGHGGRVK-LSRKYHQALEASIARNFRNNDIICC 239 (561)
Q Consensus 172 p~~a~~fy~~~~~~-la~~GVD~vKvD~q~~~~~l----------~~~~~~~~~-~~~~y~~Al~~s~~~~f~g~~ii~c 239 (561)
.+.++.|.-+-..+ +.+.+||++-+|....+-++ ...++++.. .+-.+.+-|...+.+.+++.-+|.-
T Consensus 878 ~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 878 RTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 46788887665555 56689999999986543211 111233222 1344555666666666776544443
No 47
>PRK12568 glycogen branching enzyme; Provisional
Probab=70.79 E-value=2e+02 Score=33.87 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHH-HHHcCCcEEEEccccchhhc----------cCCCCChhh-HHHHHHHHHHHHHHhhCCCCceEee
Q 008551 172 PEKVFHFYDELHSY-LASAGIDGVKVDVQNILETL----------GAGHGGRVK-LSRKYHQALEASIARNFRNNDIICC 239 (561)
Q Consensus 172 p~~a~~fy~~~~~~-la~~GVD~vKvD~q~~~~~l----------~~~~~~~~~-~~~~y~~Al~~s~~~~f~g~~ii~c 239 (561)
.+.+++|.-+-..+ +.+.|||++-+|+...+-.+ ...++++.. .+..+.+.|...+.+.+|+.-+|.-
T Consensus 382 ~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~IAE 461 (730)
T PRK12568 382 RPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVLTIAE 461 (730)
T ss_pred CHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 45678886655554 56789999999976432111 011222221 1344666677777777776545554
Q ss_pred c
Q 008551 240 M 240 (561)
Q Consensus 240 m 240 (561)
-
T Consensus 462 e 462 (730)
T PRK12568 462 E 462 (730)
T ss_pred c
Confidence 3
No 48
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=69.89 E-value=1.4e+02 Score=33.78 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHH-HHHcCCcEEEEccccc
Q 008551 174 KVFHFYDELHSY-LASAGIDGVKVDVQNI 201 (561)
Q Consensus 174 ~a~~fy~~~~~~-la~~GVD~vKvD~q~~ 201 (561)
.+++|.-+..++ +.+.|||++-+|....
T Consensus 220 ~vr~~i~~~~~~W~~e~~iDGfR~D~~~~ 248 (542)
T TIGR02402 220 EVRRYILDNALYWLREYHFDGLRLDAVHA 248 (542)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCHHH
Confidence 777886555555 4578999999998543
No 49
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.55 E-value=73 Score=34.84 Aligned_cols=144 Identities=13% Similarity=0.108 Sum_probs=75.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCH
Q 008551 19 DVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGL 98 (561)
Q Consensus 19 ~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Gl 98 (561)
-.+++++.+.++.|.+.|+..-|+.| ..+++.-. .+.... +....+-..+.+ .+-+=|
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV-----~~~G~~ly-------pS~~~p-~s~~~~~~~~~~---------~g~DpL 117 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQV-----WNDGDALY-------PSAVLP-WSDGLPGVLGVD---------PGYDPL 117 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEE-----ecCccccc-------cccccc-cccCcCcccCCC---------CCCChH
Confidence 45889999999999999999766655 22222100 011111 111110000111 111238
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccccCCcCC-CCCCcccccccccccCCCCCCCCCCCCccccccccCC---CCCCCH--
Q 008551 99 RHIVTEIKEKHDLKYVYVWHAITGYWGGVRP-GVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNG---LGLVNP-- 172 (561)
Q Consensus 99 k~lv~~i~~~~Glk~vgvWhal~GyW~GI~p-~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g---~g~~~p-- 172 (561)
+.++++.|+| ||+ |--|..... +.| .+++.+.+... .....|++... ...| ..++||
T Consensus 118 a~~I~~AHkr-~l~-v~aWf~~~~----~a~~~s~~~~~~p~~---------~~~~~~~~~~~--~~~~~~~~~~ldPg~ 180 (418)
T COG1649 118 AFVIAEAHKR-GLE-VHAWFNPYR----MAPPTSPLTKRHPHW---------LTTKRPGWVYV--RHQGWGKRVWLDPGI 180 (418)
T ss_pred HHHHHHHHhc-CCe-eeechhhcc----cCCCCChhHhhCCCC---------cccCCCCeEEE--ecCCceeeeEeCCCC
Confidence 8899999985 999 777766532 323 22222222111 11112332210 0111 223454
Q ss_pred HHHHHHHHHHHH-HHHHcCCcEEEEccccc
Q 008551 173 EKVFHFYDELHS-YLASAGIDGVKVDVQNI 201 (561)
Q Consensus 173 ~~a~~fy~~~~~-~la~~GVD~vKvD~q~~ 201 (561)
+++++|+.++.. .....-||++-.|.-..
T Consensus 181 Pevq~~i~~lv~evV~~YdvDGIQfDd~fy 210 (418)
T COG1649 181 PEVQDFITSLVVEVVRNYDVDGIQFDDYFY 210 (418)
T ss_pred hHHHHHHHHHHHHHHhCCCCCceecceeec
Confidence 788999776554 55668999999998654
No 50
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=64.13 E-value=1.3e+02 Score=31.77 Aligned_cols=70 Identities=24% Similarity=0.374 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
++++...+-..+.+++|+- .+|+...-=+..... +.+.+. +..++..| |+|
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~~v~~~~~~------------~~~~~~-i~~d~~i~--------------~~k 83 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEATAVSPEGRG------------FPGQPG-IWDDEQIP--------------GLK 83 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEEESSGGGSS------------STTSEB-SSSHHHHH--------------HHH
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEeccccccccccc------------ccccch-hchhhHHH--------------HHH
Confidence 7888999999999999987 666644321111110 001111 11122344 899
Q ss_pred HHHHHHHHhcCCc-EEEEEee
Q 008551 100 HIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 100 ~lv~~i~~~~Glk-~vgvWha 119 (561)
.+++.||+ +|-| .+=+||+
T Consensus 84 ~l~~~vh~-~Ga~i~~QL~H~ 103 (341)
T PF00724_consen 84 KLADAVHA-HGAKIIAQLWHA 103 (341)
T ss_dssp HHHHHHHH-TTSEEEEEEE--
T ss_pred HHHHHHHh-cCccceeecccc
Confidence 99999999 7966 3556886
No 51
>PRK14706 glycogen branching enzyme; Provisional
Probab=63.84 E-value=1.9e+02 Score=33.55 Aligned_cols=67 Identities=19% Similarity=0.169 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHH-HHcCCcEEEEccccchhhc--------cCCCCChh-hHHHHHHHHHHHHHHhhCCCCceEe
Q 008551 172 PEKVFHFYDELHSYL-ASAGIDGVKVDVQNILETL--------GAGHGGRV-KLSRKYHQALEASIARNFRNNDIIC 238 (561)
Q Consensus 172 p~~a~~fy~~~~~~l-a~~GVD~vKvD~q~~~~~l--------~~~~~~~~-~~~~~y~~Al~~s~~~~f~g~~ii~ 238 (561)
.+.+++|.-+-.+++ .+.+||++-+|+...+-.+ ...++++. ..+..+.+.|...+++.+++.-+|.
T Consensus 280 ~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~iA 356 (639)
T PRK14706 280 RNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMMIA 356 (639)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 467888876666655 6799999999985543211 11123322 2345567777777777666544444
No 52
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=61.74 E-value=65 Score=37.09 Aligned_cols=96 Identities=14% Similarity=0.244 Sum_probs=53.4
Q ss_pred ccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHH
Q 008551 95 ALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEK 174 (561)
Q Consensus 95 ~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~ 174 (561)
|.+||++|+..|+ .||--|-=|. .++ ..|++.....|.....+....|. .+.+++|- . .+.-.....
T Consensus 213 Pedfk~fVD~aH~-~GIgViLD~V--~~H---F~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg--~----~i~~~gr~E 279 (628)
T COG0296 213 PEDFKALVDAAHQ-AGIGVILDWV--PNH---FPPDGNYLARFDGTFLYEHEDPR-RGEHTDWG--T----AIFNYGRNE 279 (628)
T ss_pred HHHHHHHHHHHHH-cCCEEEEEec--CCc---CCCCcchhhhcCCccccccCCcc-cccCCCcc--c----chhccCcHH
Confidence 6799999999999 6976222121 111 22444444444433222111111 22344442 0 011122567
Q ss_pred HHHHH-HHHHHHHHHcCCcEEEEccccchh
Q 008551 175 VFHFY-DELHSYLASAGIDGVKVDVQNILE 203 (561)
Q Consensus 175 a~~fy-~~~~~~la~~GVD~vKvD~q~~~~ 203 (561)
++.|. ....-.|.+..||++-+|+...+.
T Consensus 280 VR~Fll~nal~Wl~~yHiDGlRvDAV~sml 309 (628)
T COG0296 280 VRNFLLANALYWLEEYHIDGLRVDAVASML 309 (628)
T ss_pred HHHHHHHHHHHHHHHhCCcceeeehhhhhh
Confidence 88885 556667888999999999977543
No 53
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=61.47 E-value=1.8e+02 Score=30.80 Aligned_cols=29 Identities=14% Similarity=0.154 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHH---HHHHcCCcEEEEccc
Q 008551 171 NPEKVFHFYDELHS---YLASAGIDGVKVDVQ 199 (561)
Q Consensus 171 ~p~~a~~fy~~~~~---~la~~GVD~vKvD~q 199 (561)
+.+++++.-++|.+ ...++|+|+|.+-+.
T Consensus 133 t~eeI~~ii~~f~~aA~~a~~aGfDgVeih~a 164 (337)
T PRK13523 133 TKEQIKETVLAFKQAAVRAKEAGFDVIEIHGA 164 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 35667776665544 567789999999865
No 54
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=58.21 E-value=1.2e+02 Score=34.44 Aligned_cols=30 Identities=23% Similarity=0.516 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEccccch
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQNIL 202 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q~~~ 202 (561)
+.++++..+..+++.+-|||++-+|+...+
T Consensus 169 p~v~~~i~~~~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 169 PEVREELKDVVNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeehhh
Confidence 578888888888888899999999987654
No 55
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=56.78 E-value=2.6e+02 Score=29.68 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
||+.+++.+|+ +|-| .+=+||+
T Consensus 78 ~~~~l~~~vh~-~g~~~~~QL~h~ 100 (353)
T cd02930 78 GHRLITDAVHA-EGGKIALQILHA 100 (353)
T ss_pred HHHHHHHHHHH-cCCEEEeeccCC
Confidence 89999999999 7866 4667885
No 56
>PLN02361 alpha-amylase
Probab=56.40 E-value=2.3e+02 Score=30.93 Aligned_cols=77 Identities=10% Similarity=0.166 Sum_probs=46.1
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcc-cCcccC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIK-ENHKFQ 82 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~KFP 82 (561)
++.+|=|.||+. ---+.|.+.++.|++.|+. .|-| .+-..... ..|++ -.++. .+++|.
T Consensus 14 ~lQ~F~W~~~~~----~~w~~i~~kl~~l~~lG~t--~iwl-----~P~~~~~~-----~~GY~----~~d~y~~~~~~G 73 (401)
T PLN02361 14 LLQAFNWESHKH----DWWRNLEGKVPDLAKSGFT--SAWL-----PPPSQSLA-----PEGYL----PQNLYSLNSAYG 73 (401)
T ss_pred EEEEEeccCCcc----HHHHHHHHHHHHHHHcCCC--EEEe-----CCCCcCCC-----CCCCC----cccccccCcccC
Confidence 556777777641 1347899999999999997 3322 22111000 00111 11222 366776
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhcCCc
Q 008551 83 KNGKEGQREEDPALGLRHIVTEIKEKHDLK 112 (561)
Q Consensus 83 ~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk 112 (561)
. ...|+.+++.+|+ .|||
T Consensus 74 t-----------~~el~~li~~~h~-~gi~ 91 (401)
T PLN02361 74 S-----------EHLLKSLLRKMKQ-YNVR 91 (401)
T ss_pred C-----------HHHHHHHHHHHHH-cCCE
Confidence 4 2369999999999 6999
No 57
>PLN02784 alpha-amylase
Probab=52.86 E-value=2.8e+02 Score=33.39 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=47.0
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcc-cCcccC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIK-ENHKFQ 82 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~KFP 82 (561)
++.+|=|.||.. ..--..|.+.++.|++.|+. .|-|==-.++... .|++ -.+|. -+++|-
T Consensus 505 mlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWLpP~~~s~s~----------~GY~----p~D~y~lds~yG 565 (894)
T PLN02784 505 LCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWLPPPTESVSP----------EGYM----PKDLYNLNSRYG 565 (894)
T ss_pred EEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEeCCCCCCCCC----------CCcC----cccccccCcCcC
Confidence 456677777653 22367889999999999998 3333111111100 0111 12222 366775
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhcCCc
Q 008551 83 KNGKEGQREEDPALGLRHIVTEIKEKHDLK 112 (561)
Q Consensus 83 ~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk 112 (561)
. ...|+.+++.+|+ .||+
T Consensus 566 T-----------~~ELk~LI~a~H~-~GIk 583 (894)
T PLN02784 566 T-----------IDELKDLVKSFHE-VGIK 583 (894)
T ss_pred C-----------HHHHHHHHHHHHH-CCCE
Confidence 4 2369999999999 6999
No 58
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=51.29 E-value=3.4e+02 Score=29.10 Aligned_cols=22 Identities=18% Similarity=0.487 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
||+.+++.||+ +|-| .+=+||+
T Consensus 84 ~~~~l~~~vh~-~G~~i~~QL~H~ 106 (370)
T cd02929 84 NLAAMTDAVHK-HGALAGIELWHG 106 (370)
T ss_pred HHHHHHHHHHH-CCCeEEEecccC
Confidence 89999999998 7966 4667887
No 59
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=49.18 E-value=3e+02 Score=32.14 Aligned_cols=139 Identities=14% Similarity=0.222 Sum_probs=75.9
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRH 100 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~ 100 (561)
+++.+.+.++.|++.|+.--||.. .++.++++ +. ...=||...-- ..-.++-+
T Consensus 332 q~~~L~~lLdrlk~~G~ntV~lqa---fadp~gd~----------------~~---~s~yfP~~~lp-----~r~d~f~~ 384 (671)
T PRK14582 332 QDRNIDVLIQRVKDMQISTVYLQA---FADPDGDG----------------LV---KELYFPNRLLP-----MRADLFNR 384 (671)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEe---ccCCCCCc----------------cc---cccccCccccc-----cccCCcCH
Confidence 456777778899999999556655 11112221 10 00123320000 01137888
Q ss_pred HHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHHHHHH
Q 008551 101 IVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180 (561)
Q Consensus 101 lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a~~fy~ 180 (561)
++=.|+.|.|+| |+-|+.+.. |. +.+..+..+.++ +...|. ...|++. ..+.-.+ +.++++..
T Consensus 385 ~aw~l~~r~~v~-v~AWmp~~~-~~-~~~~~~~~~~~~-----~~~~~~--~~~~~~~------~rl~P~~-pe~r~~i~ 447 (671)
T PRK14582 385 VAWQLRTRAGVN-VYAWMPVLS-FD-LDPTLPRVKRLD-----TGEGKA--QIHPEQY------RRLSPFD-DRVRAQVG 447 (671)
T ss_pred HHHHHHHhhCCE-EEEecccee-ec-cCCCcchhhhcc-----ccCCcc--ccCCCCC------cCCCCCC-HHHHHHHH
Confidence 888887778998 999987754 11 111111111111 111111 1234431 1122222 67899999
Q ss_pred HHHHHHHH-cCCcEEEEccccchh
Q 008551 181 ELHSYLAS-AGIDGVKVDVQNILE 203 (561)
Q Consensus 181 ~~~~~la~-~GVD~vKvD~q~~~~ 203 (561)
++++-|+. ..||+|-.|.-..+.
T Consensus 448 ~i~~dla~~~~~dGilf~Dd~~l~ 471 (671)
T PRK14582 448 MLYEDLAGHAAFDGILFHDDAVLS 471 (671)
T ss_pred HHHHHHHHhCCCceEEeccccccc
Confidence 99998888 499999999876553
No 60
>PRK05402 glycogen branching enzyme; Provisional
Probab=48.29 E-value=5.2e+02 Score=30.42 Aligned_cols=29 Identities=28% Similarity=0.353 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHH-HHcCCcEEEEcccc
Q 008551 172 PEKVFHFYDELHSYL-ASAGIDGVKVDVQN 200 (561)
Q Consensus 172 p~~a~~fy~~~~~~l-a~~GVD~vKvD~q~ 200 (561)
.+.+++|.-+..+++ .+.|||++-+|+..
T Consensus 378 ~~~v~~~l~~~~~~W~~e~~iDG~R~D~v~ 407 (726)
T PRK05402 378 RNEVRNFLVANALYWLEEFHIDGLRVDAVA 407 (726)
T ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEECCHH
Confidence 357888876666655 56899999999753
No 61
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=48.19 E-value=52 Score=34.28 Aligned_cols=22 Identities=32% Similarity=0.614 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
++|.+++.+|+ +|-| .+=+||+
T Consensus 78 ~~~~~~~~vh~-~g~~~~~Ql~h~ 100 (327)
T cd02803 78 GLRKLTEAVHA-HGAKIFAQLAHA 100 (327)
T ss_pred HHHHHHHHHHh-CCCHhhHHhhCC
Confidence 89999999999 6855 3557885
No 62
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=44.67 E-value=6.1e+02 Score=30.15 Aligned_cols=63 Identities=11% Similarity=0.012 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHH-HcCCcEEEEccccchhhcc------------CCCCChh-hHHHHHHHHHHHHHHhhCCCC
Q 008551 172 PEKVFHFYDELHSYLA-SAGIDGVKVDVQNILETLG------------AGHGGRV-KLSRKYHQALEASIARNFRNN 234 (561)
Q Consensus 172 p~~a~~fy~~~~~~la-~~GVD~vKvD~q~~~~~l~------------~~~~~~~-~~~~~y~~Al~~s~~~~f~g~ 234 (561)
.+.+++|.-+..+++. +.+||++.+|+...+-++. +.+++.+ ..+-.|.+-+...+.+.+++.
T Consensus 364 ~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~ 440 (758)
T PLN02447 364 NWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEA 440 (758)
T ss_pred CHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCe
Confidence 4578888877777665 5899999999876543220 1122222 224456666677777777654
No 63
>COG3469 Chitinase [Carbohydrate transport and metabolism]
Probab=43.79 E-value=44 Score=33.98 Aligned_cols=27 Identities=22% Similarity=0.521 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEccc
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQ 199 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q 199 (561)
.+-+.|-+++.++...||+|++-+|--
T Consensus 117 ~qE~~fv~eiirlietyGFDGLDiDLE 143 (332)
T COG3469 117 GQEQAFVNEIIRLIETYGFDGLDIDLE 143 (332)
T ss_pred chHHHHHHHHHHHHHHhCCCccccchh
Confidence 345799999999999999999999963
No 64
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=42.01 E-value=3.2e+02 Score=32.38 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHhc-CCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKH-DLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~-Glk-~vgvWha 119 (561)
||+.+++.+|+ + |-| .+=+||+
T Consensus 476 ~~~~~~~~vh~-~gg~~i~~QL~h~ 499 (765)
T PRK08255 476 AWKRIVDFVHA-NSDAKIGIQLGHS 499 (765)
T ss_pred HHHHHHHHHHh-cCCceEEEEccCC
Confidence 89999999999 7 455 4667885
No 65
>PRK12313 glycogen branching enzyme; Provisional
Probab=41.83 E-value=6e+02 Score=29.30 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHH-HHcCCcEEEEcccc
Q 008551 172 PEKVFHFYDELHSYL-ASAGIDGVKVDVQN 200 (561)
Q Consensus 172 p~~a~~fy~~~~~~l-a~~GVD~vKvD~q~ 200 (561)
.+.+++|.-+..+++ .+.|||++-+|+..
T Consensus 283 ~~~vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 283 KNEVRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 457888876666665 55799999999754
No 66
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=40.57 E-value=93 Score=36.16 Aligned_cols=125 Identities=17% Similarity=0.298 Sum_probs=73.8
Q ss_pred ccc--cchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCC
Q 008551 8 FGW--CTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNG 85 (561)
Q Consensus 8 ~GW--cTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~ 85 (561)
+|| |-||. .+|+.|++-=+.+.++.||+..+=+|--.-+.. |...| ...+||.
T Consensus 359 iGYHQcRWNY----~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdgK------------------rYFTW-Dk~~FP~-- 413 (915)
T KOG1066|consen 359 IGYHQCRWNY----NDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDGK------------------RYFTW-DKHKFPN-- 413 (915)
T ss_pred cchhhccccc----cchhhhhhhhcCccccCCccceEEEeeeecCCc------------------eeEee-ccccCCC--
Confidence 555 88883 578888888889999999977666655443321 23222 3469996
Q ss_pred CCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCccccccc------ccccCCCCCCCCCCCCccc
Q 008551 86 KEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESK------MQYPVSSPGVQSNEPCDAF 159 (561)
Q Consensus 86 ~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~------~~~~~~~~g~~~~~pd~~~ 159 (561)
-+.+++++.+ .|=|.|.+ |.|.-+.-..|.-. -++-+.+.|+- -..|||
T Consensus 414 ------------P~~Ml~kLa~-kgRklV~I----------vDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~D--yeG~CW 468 (915)
T KOG1066|consen 414 ------------PKDMLKKLAS-KGRKLVTI----------VDPHIKKDDGYFVHKEAKDKGYYVKDRDGSD--YEGWCW 468 (915)
T ss_pred ------------HHHHHHHHHh-cCCceEEE----------eCcccccCCCeEEhHHhhhCCeEEEecCCCc--cccccc
Confidence 6888999998 48887655 66654221122111 11222333432 223444
Q ss_pred cccccCCCCCCC--HHHHHHHHHHHHHHH
Q 008551 160 DSIAKNGLGLVN--PEKVFHFYDELHSYL 186 (561)
Q Consensus 160 ~~~~~~g~g~~~--p~~a~~fy~~~~~~l 186 (561)
. +.-..+| .+.++.+|.+++++-
T Consensus 469 P----G~S~yiDf~nP~~r~wW~~~fafd 493 (915)
T KOG1066|consen 469 P----GSSSYIDFINPEARKWWKSQFAFD 493 (915)
T ss_pred C----CCcccccccCHHHHHHHhhhcccc
Confidence 3 1122233 357999999988853
No 67
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
Probab=39.59 E-value=2.7e+02 Score=29.91 Aligned_cols=22 Identities=32% Similarity=0.898 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
|++.+++.+|+ +|-| .+=+||+
T Consensus 84 ~~~~vt~avH~-~G~~i~iQL~H~ 106 (363)
T COG1902 84 GLKRLTEAVHA-HGAKIFIQLWHA 106 (363)
T ss_pred HHHHHHHHHHh-cCCeEEEEeccC
Confidence 89999999999 7855 4678997
No 68
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=37.38 E-value=72 Score=32.39 Aligned_cols=28 Identities=21% Similarity=0.375 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 174 KVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 174 ~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
-++.|.+++.+++..+|+|+|-+|+.+.
T Consensus 97 ~~~~fv~S~~~~l~~~~fDGiDiDwE~~ 124 (253)
T cd06544 97 WVSNAVSSLTSIIQTYNLDGIDIDYEHF 124 (253)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeecccC
Confidence 4567889999999999999999999753
No 69
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=36.97 E-value=5.6e+02 Score=27.48 Aligned_cols=30 Identities=10% Similarity=0.187 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHH---HHHHcCCcEEEEcccc
Q 008551 171 NPEKVFHFYDELHS---YLASAGIDGVKVDVQN 200 (561)
Q Consensus 171 ~p~~a~~fy~~~~~---~la~~GVD~vKvD~q~ 200 (561)
+.+++++.-++|.+ ...++|+|+|.+-+.+
T Consensus 135 t~~eI~~ii~~f~~AA~~a~~aGfDgVeih~ah 167 (361)
T cd04747 135 TEADIDDVIAAFARAAADARRLGFDGIELHGAH 167 (361)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 34666666666544 5567899999998754
No 70
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=36.04 E-value=1.3e+02 Score=28.63 Aligned_cols=65 Identities=17% Similarity=0.278 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCC
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHN 243 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~~ 243 (561)
++...++|.+.+.+++.+.|+|+|-+|+.... ..+. .....|...|+. +++.|+..+.+.+++..
T Consensus 85 ~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~------~~~~-~~~~~~~~ll~~-lr~~l~~~~~~ls~a~~ 149 (210)
T cd00598 85 DPASRAAFANSLVSFLKTYGFDGVDIDWEYPG------AADN-SDRENFITLLRE-LRSALGAANYLLTIAVP 149 (210)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEeeeCCC------CcCc-cHHHHHHHHHHH-HHHHhcccCcEEEEEec
Confidence 35677899999999999999999999986531 1110 112233333333 34445443567777654
No 71
>PLN02803 beta-amylase
Probab=34.29 E-value=1e+02 Score=34.71 Aligned_cols=62 Identities=21% Similarity=0.373 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRH 100 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~ 100 (561)
+.+.+.+.|++|+..|+. =|.||=.|--+.+.+. +-.+| +|-+.
T Consensus 105 ~~~~l~~~L~~LK~~GVd--GVmvDVWWGiVE~~~p--------------~~YdW--------------------sgY~~ 148 (548)
T PLN02803 105 KPRAMNASLMALRSAGVE--GVMVDAWWGLVEKDGP--------------MKYNW--------------------EGYAE 148 (548)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEeeeeeeccCCC--------------CcCCc--------------------HHHHH
Confidence 668899999999999998 8999988877765422 11112 28899
Q ss_pred HHHHHHHhcCCcE--EEEEee
Q 008551 101 IVTEIKEKHDLKY--VYVWHA 119 (561)
Q Consensus 101 lv~~i~~~~Glk~--vgvWha 119 (561)
+++-||+ .|||. |-..|.
T Consensus 149 l~~mvr~-~GLKlq~vmSFHq 168 (548)
T PLN02803 149 LVQMVQK-HGLKLQVVMSFHQ 168 (548)
T ss_pred HHHHHHH-cCCeEEEEEEecc
Confidence 9999998 79885 444554
No 72
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=34.10 E-value=83 Score=33.58 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
++..-++|.+++.+++++.|+|+|-+|+.+.
T Consensus 93 ~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p 123 (358)
T cd02875 93 NPTYRTQWIQQKVELAKSQFMDGINIDIEQP 123 (358)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEcccCC
Confidence 4556678999999999999999999999763
No 73
>PLN02899 alpha-galactosidase
Probab=33.47 E-value=1.1e+02 Score=34.96 Aligned_cols=78 Identities=12% Similarity=0.170 Sum_probs=47.5
Q ss_pred EEEEeecC--CceeEEEEeecCCcceeccccccccCCCCCceEeeeeccCCCCccccCCCC--CCCcEEEEEecCCeEEe
Q 008551 366 LKIWNLND--FTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDE--WTGDAIAYSHLGGEVAY 441 (561)
Q Consensus 366 lkv~~~~~--~~~vvg~FN~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~vv~~~~~g~~~~ 441 (561)
.++|-... +.-+|++||++... .+++ +..+|+.-. +.+.. .+..+-....++||-..
T Consensus 550 ~r~w~a~g~~g~~y~~~fnl~~~~---------------~~~~--~~~~~~~~~--~~~~~~~~~~~c~~~e~w~~~~~~ 610 (633)
T PLN02899 550 VRSWIATGRKGEIYVAFFNLNQEK---------------TKIS--AKISDLAKA--LPGSKNLRTSSCTGHEVWSGKDFG 610 (633)
T ss_pred eeEEEEcCCCccEEEEEEecCccc---------------eeEE--EEhhHhHhh--ccccccccccccceEEeccCCCcc
Confidence 47787754 45679999998532 1133 334443211 11100 13356677788887632
Q ss_pred cCCCCeeeEEecCCceEEEEEE
Q 008551 442 LPKNATLPITLKSREYEVYTVV 463 (561)
Q Consensus 442 l~~~~~~~v~L~~~~~ei~~~~ 463 (561)
. -.++++.+++.+|+.||.+.
T Consensus 611 ~-~~~~~~~~v~~hg~~~~~~~ 631 (633)
T PLN02899 611 V-IKDSISATVEIHGCALFVLH 631 (633)
T ss_pred c-ccccEEEEeecCceEEEEEe
Confidence 2 25899999999999999763
No 74
>PF15016 DUF4520: Domain of unknown function (DUF4520)
Probab=33.43 E-value=89 Score=26.43 Aligned_cols=48 Identities=27% Similarity=0.353 Sum_probs=36.6
Q ss_pred EEEEeecceeeEEecCCCceEEeCCeeeeeEEec----CceEEEEEeccCcc
Q 008551 503 DMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEE----ESGLVTLTLRVPKE 550 (561)
Q Consensus 503 ~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~~----~~gl~~v~~~~~~~ 550 (561)
+..+-+.|+|-+|+..+-+.+-.||....+.|+- +.+.+++-+|-++.
T Consensus 9 e~~i~~~GrF~AysDgrVr~~F~Drt~L~l~~~~~~~~~~~~c~l~~pDG~~ 60 (85)
T PF15016_consen 9 ESSIPGVGRFTAYSDGRVRVHFDDRTILTLIWNFSSREELGWCKLTFPDGQQ 60 (85)
T ss_pred EEecCCceEEEEEcCCeEEEEEcCCCEEEEEeCCCCcccCCEEEEEccCCCE
Confidence 4456889999999999998888999999998821 23666666665554
No 75
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=33.10 E-value=5.4e+02 Score=27.28 Aligned_cols=22 Identities=36% Similarity=0.658 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
+|+.+++.||+ +|-+ .+=+||+
T Consensus 79 ~~~~l~~~vh~-~G~~i~~QL~h~ 101 (353)
T cd04735 79 GLRKLAQAIKS-KGAKAILQIFHA 101 (353)
T ss_pred HHHHHHHHHHh-CCCeEEEEecCC
Confidence 89999999999 7955 4667885
No 76
>PLN02801 beta-amylase
Probab=32.88 E-value=1.1e+02 Score=34.15 Aligned_cols=63 Identities=17% Similarity=0.353 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
.+.+.+.+.|++|+..|+. =|.+|=.|--+.+.+. +-.+| +|-+
T Consensus 34 ~~~~~l~~~L~~LK~~GVd--GVmvDVWWGiVE~~~P--------------~~YdW--------------------sgY~ 77 (517)
T PLN02801 34 EDEEGLEKQLKRLKEAGVD--GVMVDVWWGIVESKGP--------------KQYDW--------------------SAYR 77 (517)
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEeeeeeeeccCCC--------------CccCc--------------------HHHH
Confidence 4678899999999999998 7888888866655421 11112 2789
Q ss_pred HHHHHHHHhcCCcE--EEEEee
Q 008551 100 HIVTEIKEKHDLKY--VYVWHA 119 (561)
Q Consensus 100 ~lv~~i~~~~Glk~--vgvWha 119 (561)
.+++-||+ .|||. |-..|.
T Consensus 78 ~l~~mvr~-~GLKlq~vmSFHq 98 (517)
T PLN02801 78 SLFELVQS-FGLKIQAIMSFHQ 98 (517)
T ss_pred HHHHHHHH-cCCeEEEEEEecc
Confidence 99999998 79885 444555
No 77
>KOG2500 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.79 E-value=29 Score=34.42 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=30.0
Q ss_pred ecCCeEEecCCCCeeeEEecCC-ceEEEEEEeeeecC
Q 008551 434 HLGGEVAYLPKNATLPITLKSR-EYEVYTVVPVKELS 469 (561)
Q Consensus 434 ~~~g~~~~l~~~~~~~v~L~~~-~~ei~~~~Pv~~~~ 469 (561)
.|+|++.++.++....+.|+.+ ..|||..|||.+..
T Consensus 41 ~WtGrlrvvakg~~~~ikLeD~tsg~LfA~c~id~~~ 77 (253)
T KOG2500|consen 41 AWTGRLRVVAKGERCEIKLEDKTSGELFAQCPIDEGP 77 (253)
T ss_pred cccceeEEEEcCcEEEEEeccCCchhhhhhCcccCCC
Confidence 3688888888889999999865 58999999998754
No 78
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.
Probab=32.67 E-value=4.4e+02 Score=28.39 Aligned_cols=29 Identities=28% Similarity=0.444 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHH---HHHHcCCcEEEEccc
Q 008551 171 NPEKVFHFYDELHS---YLASAGIDGVKVDVQ 199 (561)
Q Consensus 171 ~p~~a~~fy~~~~~---~la~~GVD~vKvD~q 199 (561)
+.++++++-++|.+ ...++|+|+|.+-+.
T Consensus 141 t~~eI~~ii~~f~~AA~ra~~AGfDgVEih~a 172 (382)
T cd02931 141 TTEEVETFVGKFGESAVIAKEAGFDGVEIHAV 172 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 35677777666554 456789999999863
No 79
>PLN02411 12-oxophytodienoate reductase
Probab=32.25 E-value=6.8e+02 Score=27.07 Aligned_cols=22 Identities=14% Similarity=0.536 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
||+.+++.||+ +|-| .+=+||+
T Consensus 88 ~~~~l~~avH~-~G~~i~~QL~H~ 110 (391)
T PLN02411 88 AWKKVVDAVHA-KGSIIFCQLWHV 110 (391)
T ss_pred HHHHHHHHHHh-cCCEEEEeccCC
Confidence 89999999999 7966 4678885
No 80
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=31.86 E-value=1.4e+02 Score=31.09 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
++..-+.|.+++.+++.+.|+|+|=+|+.+.
T Consensus 106 ~~~~r~~Fi~siv~~l~~~~fDGidiDwE~p 136 (322)
T cd06548 106 TEASRAKFADSAVDFIRKYGFDGIDIDWEYP 136 (322)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEECCcCC
Confidence 3566678999999999999999999998753
No 81
>PLN02705 beta-amylase
Probab=31.16 E-value=1.2e+02 Score=34.71 Aligned_cols=63 Identities=27% Similarity=0.353 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
.+.+.|.+.|++|+..|+. =|.||=.|--+.+.+. +-.+| +|-+
T Consensus 265 ~~~~al~a~L~aLK~aGVd--GVmvDVWWGiVE~~~P--------------~~YdW--------------------sgY~ 308 (681)
T PLN02705 265 VDPEGVRQELSHMKSLNVD--GVVVDCWWGIVEGWNP--------------QKYVW--------------------SGYR 308 (681)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEeeeeeEeecCCC--------------CcCCc--------------------HHHH
Confidence 4678999999999999998 8999988876665421 11112 2889
Q ss_pred HHHHHHHHhcCCcE--EEEEee
Q 008551 100 HIVTEIKEKHDLKY--VYVWHA 119 (561)
Q Consensus 100 ~lv~~i~~~~Glk~--vgvWha 119 (561)
.+++-||+ .|||. |-..|.
T Consensus 309 ~L~~mvr~-~GLKlqvVmSFHq 329 (681)
T PLN02705 309 ELFNIIRE-FKLKLQVVMAFHE 329 (681)
T ss_pred HHHHHHHH-cCCeEEEEEEeec
Confidence 99999998 79885 444555
No 82
>PLN00197 beta-amylase; Provisional
Probab=30.53 E-value=1.3e+02 Score=33.99 Aligned_cols=63 Identities=22% Similarity=0.374 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
.+.+.+.+.|++|+..|+. =|.||=.|--+.+.+. +-.+| +|-+
T Consensus 124 ~~~~~l~~~L~~LK~~GVd--GVmvDvWWGiVE~~~p--------------~~YdW--------------------sgY~ 167 (573)
T PLN00197 124 NRRKAMKASLQALKSAGVE--GIMMDVWWGLVERESP--------------GVYNW--------------------GGYN 167 (573)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEeeeeeeeccCCC--------------CcCCc--------------------HHHH
Confidence 4678899999999999998 8999988877665422 11112 2889
Q ss_pred HHHHHHHHhcCCcE--EEEEee
Q 008551 100 HIVTEIKEKHDLKY--VYVWHA 119 (561)
Q Consensus 100 ~lv~~i~~~~Glk~--vgvWha 119 (561)
.+++-||+ .|||. |-..|.
T Consensus 168 ~L~~mvr~-~GLKlq~VmSFHq 188 (573)
T PLN00197 168 ELLEMAKR-HGLKVQAVMSFHQ 188 (573)
T ss_pred HHHHHHHH-cCCeEEEEEEecc
Confidence 99999998 79885 444555
No 83
>PRK05628 coproporphyrinogen III oxidase; Validated
Probab=29.95 E-value=4.6e+02 Score=27.87 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcc
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDV 198 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~ 198 (561)
+...++|....+.|.+.|.....+++
T Consensus 220 ~~~~~~~~~~~~~l~~~G~~~ye~s~ 245 (375)
T PRK05628 220 DVLADRYELADARLSAAGFDWYEVSN 245 (375)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeeecc
Confidence 44567888999999999999888776
No 84
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=28.82 E-value=1.9e+02 Score=29.97 Aligned_cols=69 Identities=13% Similarity=0.135 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccC
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSH 242 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~ 242 (561)
++..-+.|.+++.+++.+.|+|+|-+|+.+... ......-+.+.++.+++|....++. +..+.+.+++-
T Consensus 89 ~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~--~~d~~n~~~ll~elr~~l~~~~~~~-~~~~~~ls~av 157 (299)
T cd02879 89 DPTARKAFINSSIKVARKYGFDGLDLDWEFPSS--QVEMENFGKLLEEWRAAVKDEARSS-GRPPLLLTAAV 157 (299)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceeecccCCCC--hhHHHHHHHHHHHHHHHHHHHhhcc-CCCcEEEEeec
Confidence 356678999999999999999999999865210 0000112345555566655332111 11346777664
No 85
>PLN02161 beta-amylase
Probab=28.68 E-value=1.4e+02 Score=33.37 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
-+.+.+.+.|++|+..|+. =|.||=.|--+.+.+. +-.+| +|-+
T Consensus 114 ~~~~al~~~L~~LK~~GVd--GVmvDVWWGiVE~~~p--------------~~YdW--------------------sgY~ 157 (531)
T PLN02161 114 KRLKALTVSLKALKLAGVH--GIAVEVWWGIVERFSP--------------LEFKW--------------------SLYE 157 (531)
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEEeeeeeeecCCC--------------CcCCc--------------------HHHH
Confidence 3567789999999999998 8999988877665422 11112 2889
Q ss_pred HHHHHHHHhcCCcE
Q 008551 100 HIVTEIKEKHDLKY 113 (561)
Q Consensus 100 ~lv~~i~~~~Glk~ 113 (561)
.+++-||+ .|||.
T Consensus 158 ~l~~mvr~-~GLKl 170 (531)
T PLN02161 158 ELFRLISE-AGLKL 170 (531)
T ss_pred HHHHHHHH-cCCeE
Confidence 99999998 79885
No 86
>PLN00196 alpha-amylase; Provisional
Probab=28.54 E-value=1.6e+02 Score=32.41 Aligned_cols=33 Identities=15% Similarity=0.317 Sum_probs=26.3
Q ss_pred cCCCccccchhhhccCCCHHHHHHHHHHHHhCCCC
Q 008551 4 MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP 38 (561)
Q Consensus 4 ~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~ 38 (561)
++.+|=|.+|..-+. .-+.|.+.|+.|++.|+.
T Consensus 27 ~~Q~F~W~~~~~~gg--~~~~i~~kldyL~~LGvt 59 (428)
T PLN00196 27 LFQGFNWESWKQNGG--WYNFLMGKVDDIAAAGIT 59 (428)
T ss_pred EEEeeccCCCCCCCc--CHHHHHHHHHHHHHcCCC
Confidence 567788888876433 467799999999999997
No 87
>PRK07379 coproporphyrinogen III oxidase; Provisional
Probab=27.87 E-value=5.3e+02 Score=27.83 Aligned_cols=70 Identities=13% Similarity=0.198 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHH
Q 008551 97 GLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVF 176 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a~ 176 (561)
.++..++.+.+ ++..+|.+. .+. +.|..+..+.++. +...+.+.+...
T Consensus 183 ~~~~tl~~~~~-l~p~~is~y-~L~-----~~pgT~l~~~~~~-------------------------g~~~~~~~~~~~ 230 (400)
T PRK07379 183 DWQASLEAAIA-LNPTHLSCY-DLV-----LEPGTAFGKQYQP-------------------------GKAPLPSDETTA 230 (400)
T ss_pred HHHHHHHHHHc-CCCCEEEEe-cce-----ecCCchhHHHhhc-------------------------CCCCCCCHHHHH
Confidence 56777777776 788877653 221 4454433222211 012233456677
Q ss_pred HHHHHHHHHHHHcCCcEEEEcc
Q 008551 177 HFYDELHSYLASAGIDGVKVDV 198 (561)
Q Consensus 177 ~fy~~~~~~la~~GVD~vKvD~ 198 (561)
++|+...+.|.+.|..=..+++
T Consensus 231 ~~~~~~~~~L~~~Gy~~yeisn 252 (400)
T PRK07379 231 AMYRLAQEILTQAGYEHYEISN 252 (400)
T ss_pred HHHHHHHHHHHHcCCceeeeeh
Confidence 8999999999999988877776
No 88
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=27.57 E-value=2.5e+02 Score=29.21 Aligned_cols=64 Identities=9% Similarity=0.121 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCC
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNT 244 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~~~ 244 (561)
..+.+|.+.+.+.+..+|+|+|-+|..+.. .. ..+....+.+||.. +++.+++..+...+.-.+
T Consensus 87 ~~~~~~~~a~~~~i~~y~~dgiDfDiE~~~------~~-d~~~~~~~~~al~~-Lq~~~p~l~vs~Tlp~~p 150 (294)
T cd06543 87 TSADQLAAAYQKVIDAYGLTHLDFDIEGGA------LT-DTAAIDRRAQALAL-LQKEYPDLKISFTLPVLP 150 (294)
T ss_pred ccHHHHHHHHHHHHHHhCCCeEEEeccCCc------cc-cchhHHHHHHHHHH-HHHHCCCcEEEEecCCCC
Confidence 456789999999999999999999986531 11 11223456666654 466666554444443333
No 89
>smart00642 Aamy Alpha-amylase domain.
Probab=27.50 E-value=2.8e+02 Score=26.10 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=45.4
Q ss_pred CCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCccc-CcccCC
Q 008551 5 LNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE-NHKFQK 83 (561)
Q Consensus 5 ~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~KFP~ 83 (561)
.+.|.|...+..+ +-++|.+.++.|++.|+. .|.| .+-...... ..........++.. +++|-.
T Consensus 4 ~~~F~~~~~~~~G---~~~gi~~~l~yl~~lG~~--~I~l-----~Pi~~~~~~-----~~~~~gY~~~d~~~i~~~~Gt 68 (166)
T smart00642 4 PDRFADGNGDGGG---DLQGIIEKLDYLKDLGVT--AIWL-----SPIFESPQG-----YPSYHGYDISDYKQIDPRFGT 68 (166)
T ss_pred eccccCCCCCCCc---CHHHHHHHHHHHHHCCCC--EEEE-----CcceeCCCC-----CCCCCCcCccccCCCCcccCC
Confidence 4556666555533 457888999999999998 5544 211100000 00000111233332 345542
Q ss_pred CCCCCCCCCCCccCHHHHHHHHHHhcCCc
Q 008551 84 NGKEGQREEDPALGLRHIVTEIKEKHDLK 112 (561)
Q Consensus 84 ~~~~~~~~~~~~~Glk~lv~~i~~~~Glk 112 (561)
...|+.+++.+|+ .||+
T Consensus 69 -----------~~d~~~lv~~~h~-~Gi~ 85 (166)
T smart00642 69 -----------MEDFKELVDAAHA-RGIK 85 (166)
T ss_pred -----------HHHHHHHHHHHHH-CCCE
Confidence 2479999999999 6999
No 90
>PLN02905 beta-amylase
Probab=27.20 E-value=1.5e+02 Score=34.04 Aligned_cols=63 Identities=17% Similarity=0.287 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHH
Q 008551 20 VTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLR 99 (561)
Q Consensus 20 vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk 99 (561)
.+.+.+.+.|++|+..|+. =|.||=.|--+.+.+. +-.+| +|-+
T Consensus 283 ~~~~al~a~L~aLK~aGVd--GVmvDVWWGiVE~~gP--------------~~YdW--------------------sgY~ 326 (702)
T PLN02905 283 ADPDGLLKQLRILKSINVD--GVKVDCWWGIVEAHAP--------------QEYNW--------------------NGYK 326 (702)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEeeeeeeeecCCC--------------CcCCc--------------------HHHH
Confidence 4678899999999999998 8999988876665421 11112 2889
Q ss_pred HHHHHHHHhcCCcE--EEEEee
Q 008551 100 HIVTEIKEKHDLKY--VYVWHA 119 (561)
Q Consensus 100 ~lv~~i~~~~Glk~--vgvWha 119 (561)
.+++-||+ .|||. |-..|.
T Consensus 327 ~L~~mvr~-~GLKlqvVMSFHq 347 (702)
T PLN02905 327 RLFQMVRE-LKLKLQVVMSFHE 347 (702)
T ss_pred HHHHHHHH-cCCeEEEEEEecc
Confidence 99999998 79885 444554
No 91
>PLN03244 alpha-amylase; Provisional
Probab=25.88 E-value=7.7e+02 Score=29.59 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHH-HHHcCCcEEEEccccch
Q 008551 172 PEKVFHFYDELHSY-LASAGIDGVKVDVQNIL 202 (561)
Q Consensus 172 p~~a~~fy~~~~~~-la~~GVD~vKvD~q~~~ 202 (561)
.+.+++|.-+-.++ +.+.+||++-+|+...+
T Consensus 505 ~~EVr~FLLsna~yWleEyhIDGFRfDaVtSM 536 (872)
T PLN03244 505 DLDVLHFLISNLNWWITEYQIDGFQFHSLASM 536 (872)
T ss_pred CHHHHHHHHHHHHHHHHHhCcCcceeecchhh
Confidence 46788997665555 56899999999987543
No 92
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=25.44 E-value=1.8e+02 Score=26.69 Aligned_cols=46 Identities=26% Similarity=0.357 Sum_probs=31.3
Q ss_pred eeEEecCCCceEEeCCeeeeeEEecCceEEEEEeccCccc-ceeeeEEE
Q 008551 512 FGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEE-LYLWNISF 559 (561)
Q Consensus 512 ~g~Y~s~~P~~~~v~g~~~~f~y~~~~gl~~v~~~~~~~~-~~~~~v~~ 559 (561)
.|-|.-.-+-...|+-..+..+|.. |+|+|.+|-.+++ .....|+|
T Consensus 99 ~~~f~r~~~Lp~~v~~~~~~A~~~n--GvL~I~lpk~~~~~~~~~~i~I 145 (146)
T COG0071 99 YGEFERTFRLPEKVDPEVIKAKYKN--GLLTVTLPKAEPEEKKPKRIEI 145 (146)
T ss_pred eeeEEEEEECcccccccceeeEeeC--cEEEEEEeccccccccCceeec
Confidence 4555555555566777778899977 9999999865543 34555554
No 93
>PRK14839 undecaprenyl pyrophosphate synthase; Provisional
Probab=25.36 E-value=4.2e+02 Score=26.78 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=26.9
Q ss_pred CCCCCccCc-ccChhHHHHHHHHHhcCCceEecCC--CCCCCHHHHhhh
Q 008551 288 MQPDWDMFH-SLHPMAEYHGAARAVGGCAIYVSDK--PGQHDFNLLRKL 333 (561)
Q Consensus 288 ~~pD~DMf~-s~~~~a~~Haa~raisggPlyisD~--pg~~d~~lL~~l 333 (561)
..||+|++. |+...--.-+-.|..+-+-||.+|. |+=.-.++++-+
T Consensus 168 ~~p~~DLlIRTsGE~RLSnFLlWQ~ayael~F~d~lWPdF~~~d~~~ai 216 (239)
T PRK14839 168 DGGDVDLLIRTGGEKRLSDFLLWESAYAELHFTDRMWPDFGADDLAAAV 216 (239)
T ss_pred CCCCCCEEEeCCCccccccchhhhhhheEEEEccCCCccCCHHHHHHHH
Confidence 458888885 3333322344445555577888888 655555555544
No 94
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....
Probab=24.51 E-value=2.2e+02 Score=29.27 Aligned_cols=31 Identities=32% Similarity=0.598 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
++...+.|.+.+.+++.+.|+|+|-+|+...
T Consensus 96 ~~~~r~~f~~~i~~~l~~y~~DGidiD~e~~ 126 (343)
T PF00704_consen 96 NPAKRQNFINNIVSFLKKYGFDGIDIDWEYP 126 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHHT-SEEEEEESST
T ss_pred cHHHHHHHHHhhhhhhcccCcceeeeeeeec
Confidence 3567889999999999999999999999764
No 95
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=24.44 E-value=8.5e+02 Score=25.67 Aligned_cols=145 Identities=14% Similarity=0.210 Sum_probs=83.5
Q ss_pred hccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCc
Q 008551 16 FYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPA 95 (561)
Q Consensus 16 ~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~ 95 (561)
||..-+.+.+.++++..++.||. .++++=-|... . +|. +
T Consensus 51 yYdl~~p~v~~~Q~~lA~~~GI~--gF~~~~Ywf~g--k----------------~lL--e------------------- 89 (345)
T PF14307_consen 51 YYDLRDPEVMEKQAELAKEYGID--GFCFYHYWFNG--K----------------RLL--E------------------- 89 (345)
T ss_pred cccCCCHHHHHHHHHHHHHhCCC--EEEEEeeecCC--c----------------hHH--H-------------------
Confidence 44445778889999999999998 99999999832 1 232 1
Q ss_pred cCHHHHHHHHHH-hcCCcEEEEE--eeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCH
Q 008551 96 LGLRHIVTEIKE-KHDLKYVYVW--HAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNP 172 (561)
Q Consensus 96 ~Glk~lv~~i~~-~~Glk~vgvW--hal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p 172 (561)
+++-..+.. +..+++.-+| |.....|.|......... ...+.
T Consensus 90 ---~p~~~~l~~~~~d~pFcl~WAN~~w~~~w~g~~~~~l~~q--------------------------------~y~~~ 134 (345)
T PF14307_consen 90 ---KPLENLLASKEPDFPFCLCWANENWTRRWDGRNNEILIEQ--------------------------------KYSGE 134 (345)
T ss_pred ---HHHHHHHhcCCCCCcEEEEECCChhhhccCCCCccccccc--------------------------------cCCch
Confidence 222122222 2348887888 666666766522110000 01123
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhh-CCCCceEeecc
Q 008551 173 EKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARN-FRNNDIICCMS 241 (561)
Q Consensus 173 ~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~-f~g~~ii~cms 241 (561)
++..+|++.+..++++- -|+|||..-.+-.... +.....+.+.+.|+..++++ +++--+|.+..
T Consensus 135 ~d~~~~~~~l~~~F~D~--rYikVdGKPv~~Iy~p---~~~pd~~~~~~~wr~~a~~~G~~giyii~~~~ 199 (345)
T PF14307_consen 135 DDWKEHFRYLLPYFKDP--RYIKVDGKPVFLIYRP---GDIPDIKEMIERWREEAKEAGLPGIYIIAVQG 199 (345)
T ss_pred hHHHHHHHHHHHHhCCC--CceeECCEEEEEEECc---ccccCHHHHHHHHHHHHHHcCCCceEEEEEec
Confidence 56678888888888764 5899998754432221 22233455556665554443 33333555554
No 96
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.
Probab=22.90 E-value=1.8e+02 Score=29.49 Aligned_cols=29 Identities=28% Similarity=0.652 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
++..+.|++.+.+++.+.|+|+|-+|+..
T Consensus 94 ~~~r~~f~~s~~~~~~~~~~DGiDiDwE~ 122 (256)
T cd06546 94 DEDFERYYGQLRDMIRRRGLDGLDLDVEE 122 (256)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeeec
Confidence 46678999999999999999999999854
No 97
>PLN02960 alpha-amylase
Probab=22.61 E-value=1.4e+03 Score=27.66 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHH-HHHcCCcEEEEccccch
Q 008551 172 PEKVFHFYDELHSY-LASAGIDGVKVDVQNIL 202 (561)
Q Consensus 172 p~~a~~fy~~~~~~-la~~GVD~vKvD~q~~~ 202 (561)
.+.+++|.-+-.++ +.+.+||++-+|+...+
T Consensus 530 ~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sM 561 (897)
T PLN02960 530 DHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSM 561 (897)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCceeeccccee
Confidence 46788887666665 46789999999987654
No 98
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism]
Probab=22.47 E-value=1.7e+02 Score=32.21 Aligned_cols=59 Identities=14% Similarity=0.182 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhh
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARN 230 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~ 230 (561)
++..-+.|+++..++|+++|+|+|-+|++... .-......-..+.+..+.|++.-..+.
T Consensus 144 ~~~~r~~FI~Sii~fl~~~~fDGvDL~We~P~-~~~~d~~~~~~~i~elr~~~~~~~~~~ 202 (432)
T KOG2806|consen 144 DRMIRAKFIESVVSFIKDYGFDGVDLAWEWPL-FTPSDQLEFSRFIQELRSAFARETLKS 202 (432)
T ss_pred ChHHHHHHHHHHHHHHHHcCCCceeeeeECCC-CchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 46677899999999999999999999998742 000011223466777777777654443
No 99
>PRK10605 N-ethylmaleimide reductase; Provisional
Probab=22.40 E-value=6.9e+02 Score=26.70 Aligned_cols=22 Identities=18% Similarity=0.447 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHhcCCc-EEEEEee
Q 008551 97 GLRHIVTEIKEKHDLK-YVYVWHA 119 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk-~vgvWha 119 (561)
||+.+++.+|+ +|-| .+=+||+
T Consensus 80 ~~~~lad~vH~-~Ga~i~~QL~H~ 102 (362)
T PRK10605 80 AWKKITAGVHA-EGGHIAVQLWHT 102 (362)
T ss_pred HHHHHHHHHHh-CCCEEEEeccCC
Confidence 89999999999 7965 4667885
No 100
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=22.08 E-value=1e+02 Score=31.04 Aligned_cols=26 Identities=35% Similarity=0.543 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCCcEEEEeC
Q 008551 19 DVTGEGVKQGLESFEKGGIPPKFIIIDD 46 (561)
Q Consensus 19 ~vte~~i~~~~~~L~~~Gi~~~~viIDD 46 (561)
.+|++++...+++|++.++. |+|||-
T Consensus 96 alt~E~v~~vv~eL~~~~fD--yIi~Ds 121 (272)
T COG2894 96 ALTPEGVKKVVNELKAMDFD--YIIIDS 121 (272)
T ss_pred cCCHHHHHHHHHHHHhcCCC--EEEecC
Confidence 68999999999999997776 999984
No 101
>PRK05799 coproporphyrinogen III oxidase; Provisional
Probab=21.99 E-value=6.8e+02 Score=26.50 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHH
Q 008551 97 GLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVF 176 (561)
Q Consensus 97 Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~~~~~g~g~~~p~~a~ 176 (561)
.++..++.+.+ +++.++.+.. +. +.|+.+..+.++. +.+.+.+.+...
T Consensus 167 ~~~~~l~~~~~-l~~~~is~y~-l~-----~~pgT~l~~~~~~-------------------------g~~~~~~~~~~~ 214 (374)
T PRK05799 167 DWKETLEKVVE-LNPEHISCYS-LI-----IEEGTPFYNLYEN-------------------------GKLKLPDEEEER 214 (374)
T ss_pred HHHHHHHHHHh-cCCCEEEEec-cE-----ecCCCHHHHHHhc-------------------------CCCCCCChHHHH
Confidence 57777888877 7888766532 21 4454433221111 112223346667
Q ss_pred HHHHHHHHHHHHcCCcEEEEcc
Q 008551 177 HFYDELHSYLASAGIDGVKVDV 198 (561)
Q Consensus 177 ~fy~~~~~~la~~GVD~vKvD~ 198 (561)
++|....+.|.+.|..=..+++
T Consensus 215 ~~~~~~~~~l~~~Gy~~ye~~~ 236 (374)
T PRK05799 215 EMYHYTIEFLKEKGYHQYEISN 236 (374)
T ss_pred HHHHHHHHHHHHcCCcEEeeee
Confidence 8888888999999987777765
No 102
>PF01136 Peptidase_U32: Peptidase family U32 This is family U32 in the peptidase classification. ; InterPro: IPR001539 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belonging to MEROPS peptidase family U32 (clan U-). The type example is collagenase (gene prtC) from Porphyromonas gingivalis (Bacteroides gingivalis) [], which is an enzyme that degrades type I collagen and that seems to require a metal cofactor. The product of PrtC is evolutionary related to a number of uncharacterised proteins with a well conserved region containing two cysteines.; GO: 0008233 peptidase activity, 0006508 proteolysis
Probab=21.69 E-value=1.1e+02 Score=30.07 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=27.2
Q ss_pred HHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHH
Q 008551 182 LHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEAS 226 (561)
Q Consensus 182 ~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s 226 (561)
....|.+.||+.+|+|....- ..--.+.+++|++||...
T Consensus 161 ~l~~L~~~Gv~~~rI~~r~~~------~~~~~~iv~~Y~~~l~~~ 199 (233)
T PF01136_consen 161 ELPELKDAGVDSFRIDGRTES------PEYIEEIVKAYREALDNP 199 (233)
T ss_pred HHHHHHHcCCCEEEEcCccCC------HHHHHHHHHHHHHHHHHH
Confidence 344568899999999996531 111236788899998865
No 103
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=21.55 E-value=1.5e+02 Score=29.70 Aligned_cols=30 Identities=30% Similarity=0.612 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
++...+.|.+++.+++++.|+|+|-+|+..
T Consensus 80 ~~~~r~~fi~~lv~~~~~~~~DGIdiDwE~ 109 (253)
T cd06545 80 DPAKRKALVDKIINYVVSYNLDGIDVDLEG 109 (253)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeec
Confidence 456667899999999999999999999965
No 104
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=21.19 E-value=3.4e+02 Score=26.96 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEccccc
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQNI 201 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~~ 201 (561)
++..++|.+.+..++...|+|+|=+|+...
T Consensus 86 ~~~~~~fa~~l~~~v~~yglDGiDiD~E~~ 115 (255)
T cd06542 86 DAAAKAYAKAIVDTVDKYGLDGVDFDDEYS 115 (255)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeeeec
Confidence 567889999999999999999999998653
No 105
>PRK09549 mtnW 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; Reviewed
Probab=21.08 E-value=2.6e+02 Score=30.54 Aligned_cols=68 Identities=13% Similarity=-0.048 Sum_probs=38.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCC
Q 008551 165 NGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHN 243 (561)
Q Consensus 165 ~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cms~~ 243 (561)
..+|+...+-++..| .++.-|||++|=|=.-.- ..+..-.+-.+++.+|++++-++ +|+..++.+.-.
T Consensus 143 P~~GLsp~~~a~~~y-----~~~~GGvD~IKDDE~l~~----q~~~p~~eRv~~~~~a~~~a~~e--TG~~~~y~~NiT 210 (407)
T PRK09549 143 GVIGRDLDYLKEQLR-----DQALGGVDLVKDDEILFE----NALTPFEKRIVAGKEVLQEVYET--TGHKTLYAVNLT 210 (407)
T ss_pred CccCCCHHHHHHHHH-----HHHhcCCcceecCcCCCC----CCCcCHHHHHHHHHHHHHHHHHh--hCCcceEEEecC
Confidence 346664333334333 357789999999932110 01122234466778888877666 466666665443
No 106
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=21.00 E-value=98 Score=33.65 Aligned_cols=53 Identities=17% Similarity=0.391 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHHHHH
Q 008551 24 GVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVT 103 (561)
Q Consensus 24 ~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~lv~ 103 (561)
.+.+.|++|++.|+. =|.+|=.|-.+.+.+. .+ .+ | +|-+.+++
T Consensus 17 ~~~~~L~~LK~~GV~--GVmvdvWWGiVE~~~p---------~~-----yd------W--------------s~Y~~l~~ 60 (402)
T PF01373_consen 17 ALEAQLRALKSAGVD--GVMVDVWWGIVEGEGP---------QQ-----YD------W--------------SGYRELFE 60 (402)
T ss_dssp HHHHHHHHHHHTTEE--EEEEEEEHHHHTGSST---------TB----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCc--EEEEEeEeeeeccCCC---------Cc-----cC------c--------------HHHHHHHH
Confidence 899999999999986 6777777765554321 01 11 2 28899999
Q ss_pred HHHHhcCCcE
Q 008551 104 EIKEKHDLKY 113 (561)
Q Consensus 104 ~i~~~~Glk~ 113 (561)
.||+ .|||.
T Consensus 61 ~vr~-~GLk~ 69 (402)
T PF01373_consen 61 MVRD-AGLKL 69 (402)
T ss_dssp HHHH-TT-EE
T ss_pred HHHH-cCCeE
Confidence 9998 79995
No 107
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=20.48 E-value=2.9e+02 Score=27.88 Aligned_cols=79 Identities=15% Similarity=0.283 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcccCCCCCCCCCCCCCccCHHH
Q 008551 21 TGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRH 100 (561)
Q Consensus 21 te~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~KFP~~~~~~~~~~~~~~Glk~ 100 (561)
.-+.++..++.++.+|. +++|=|=.-...-..+. .-.+.+.+- ....+|.-+| -+++
T Consensus 52 ~~~n~r~~Adk~A~~Gy---~v~vPD~~~Gdp~~~~~---~~~~~~~w~---~~~~~~~~~~--------------~i~~ 108 (242)
T KOG3043|consen 52 QFPNTREGADKVALNGY---TVLVPDFFRGDPWSPSL---QKSERPEWM---KGHSPPKIWK--------------DITA 108 (242)
T ss_pred ccHHHHHHHHHHhcCCc---EEEcchhhcCCCCCCCC---ChhhhHHHH---hcCCcccchh--------------HHHH
Confidence 34568899999999998 56666544331101100 000111111 1122344466 4999
Q ss_pred HHHHHHHhcC-CcEEEEEeeeccccCC
Q 008551 101 IVTEIKEKHD-LKYVYVWHAITGYWGG 126 (561)
Q Consensus 101 lv~~i~~~~G-lk~vgvWhal~GyW~G 126 (561)
+++.||. +| .|.||+- -+| |||
T Consensus 109 v~k~lk~-~g~~kkIGv~-GfC--wGa 131 (242)
T KOG3043|consen 109 VVKWLKN-HGDSKKIGVV-GFC--WGA 131 (242)
T ss_pred HHHHHHH-cCCcceeeEE-EEe--ecc
Confidence 9999998 68 7889872 333 665
No 108
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R.rubrum RLP. RLP from Rhodospirillum rubrum plays a role in an uncharacterized sulfur salvage pathway and has been shown to catalyze a novel isomerization reaction that converts 5-methylthio-d-ribulose 1-phosphate to a 3:1 mixture of 1-methylthioxylulose 5-phosphate and 1-methylthioribulose 5-phosphate.
Probab=20.42 E-value=2.6e+02 Score=30.07 Aligned_cols=46 Identities=22% Similarity=0.098 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHh
Q 008551 180 DELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIAR 229 (561)
Q Consensus 180 ~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~ 229 (561)
.++...++..|||++|-|-.-.- ..+....+-.++..+|++++-.+
T Consensus 144 a~~~~~~~~gGvD~IKdDe~l~~----~~~~p~~eRv~~v~~av~~a~~e 189 (364)
T cd08210 144 AELAYAFALGGIDIIKDDHGLAD----QPFAPFEERVKACQEAVAEANAE 189 (364)
T ss_pred HHHHHHHHhcCCCeeecCccccC----ccCCCHHHHHHHHHHHHHHHHhh
Confidence 33444567799999999952110 11222345566788888877555
No 109
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism]
Probab=20.31 E-value=2.6e+02 Score=30.70 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHH-------HHHHHHHHHHhhCCCCceEeeccC
Q 008551 172 PEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRK-------YHQALEASIARNFRNNDIICCMSH 242 (561)
Q Consensus 172 p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~-------y~~Al~~s~~~~f~g~~ii~cms~ 242 (561)
+..-+.|-++..++++.+++|+|-+|+-+....-.++..+++++.+. .|++|..+-.+ .||....+.+.
T Consensus 149 ~a~re~Fa~saVe~~r~~~FDGVDIDWEYP~~~~~~~~~~~~~d~~ny~~Ll~eLR~~LD~a~~e--dgr~Y~LTiA~ 224 (441)
T COG3325 149 DASRENFAKSAVEFMRTYGFDGVDIDWEYPGSGGDAGNCGRPKDKANYVLLLQELRKKLDKAGVE--DGRHYQLTIAA 224 (441)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceeeccccCCCCCCCCCCCCcccHHHHHHHHHHHHHHHhhcccc--cCceEEEEEec
Confidence 56678999999999999999999999966432222222234444444 44444443222 25555555554
No 110
>PRK14833 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.19 E-value=6.5e+02 Score=25.31 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhcCCcEEEEE
Q 008551 98 LRHIVTEIKEKHDLKYVYVW 117 (561)
Q Consensus 98 lk~lv~~i~~~~Glk~vgvW 117 (561)
+..+++...+ +|||++.+|
T Consensus 37 l~~~~~~c~~-~gI~~lTvy 55 (233)
T PRK14833 37 LREITIWCAN-HKLECLTLY 55 (233)
T ss_pred HHHHHHHHHH-cCCCEEEEe
Confidence 4445555565 899998775
No 111
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=20.00 E-value=2.6e+02 Score=29.46 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccc
Q 008551 171 NPEKVFHFYDELHSYLASAGIDGVKVDVQN 200 (561)
Q Consensus 171 ~p~~a~~fy~~~~~~la~~GVD~vKvD~q~ 200 (561)
++..-..|.+++.+++.+.|+|+|-+|+..
T Consensus 93 ~~~~r~~fi~~iv~~l~~~~~DGidiDwE~ 122 (362)
T cd02872 93 SPENRKTFIKSAIAFLRKYGFDGLDLDWEY 122 (362)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeeeeeec
Confidence 355667899999999999999999999865
Done!