Query 008558
Match_columns 561
No_of_seqs 332 out of 2244
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:21:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.1E-31 3.9E-36 271.9 26.0 222 47-296 19-245 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 2.2E-31 7.5E-36 271.8 16.8 221 47-297 20-248 (296)
3 3b7y_A E3 ubiquitin-protein li 99.8 1.5E-17 5.3E-22 152.3 15.7 126 47-197 20-152 (153)
4 2ep6_A MCTP2 protein; beta san 99.7 3.3E-17 1.1E-21 146.6 13.9 125 40-197 6-131 (133)
5 3m7f_B E3 ubiquitin-protein li 99.7 7.4E-17 2.5E-21 151.5 16.1 129 46-199 7-142 (176)
6 3kwu_A MUNC13-1; calcium bindi 99.7 1.5E-16 5.1E-21 144.9 16.0 131 44-196 14-145 (148)
7 2dmh_A Myoferlin; beta-sandwic 99.7 1.4E-16 4.8E-21 143.6 14.4 121 46-198 6-133 (140)
8 1rlw_A Phospholipase A2, CALB 99.7 5.6E-17 1.9E-21 143.4 11.3 118 47-197 3-124 (126)
9 2z0u_A WW domain-containing pr 99.7 1.1E-17 3.8E-22 154.2 6.6 124 185-310 27-154 (155)
10 3pyc_A E3 ubiquitin-protein li 99.7 4E-16 1.4E-20 139.3 14.9 120 47-194 5-129 (132)
11 1wfj_A Putative elicitor-respo 99.7 1.3E-16 4.4E-21 143.1 11.6 123 43-199 6-131 (136)
12 2fk9_A Protein kinase C, ETA t 99.7 2E-16 6.9E-21 145.8 13.0 103 46-166 28-145 (157)
13 1gmi_A Protein kinase C, epsil 99.7 2.5E-16 8.5E-21 141.5 13.1 112 47-196 6-131 (136)
14 3fdw_A Synaptotagmin-like prot 99.7 1.4E-16 4.9E-21 145.2 11.3 126 185-311 7-134 (148)
15 2b3r_A Phosphatidylinositol-4- 99.7 3.9E-16 1.3E-20 140.0 13.2 107 47-166 20-130 (134)
16 2z0u_A WW domain-containing pr 99.7 1.2E-16 4E-21 147.3 9.8 108 47-165 43-154 (155)
17 2bwq_A Regulating synaptic mem 99.7 1.6E-16 5.5E-21 141.0 10.4 122 186-309 3-128 (129)
18 1ugk_A Synaptotagmin IV, KIAA1 99.7 3.6E-16 1.2E-20 140.7 12.6 112 185-299 6-120 (138)
19 2nq3_A Itchy homolog E3 ubiqui 99.7 2.9E-16 1E-20 147.3 12.1 120 46-197 35-160 (173)
20 3rdl_A Protein kinase C alpha 99.7 3.1E-16 1E-20 140.6 11.7 123 186-313 3-126 (137)
21 2ep6_A MCTP2 protein; beta san 99.7 1.6E-16 5.5E-21 142.1 9.5 118 197-330 9-127 (133)
22 1v27_A Regulating synaptic mem 99.7 1.7E-16 5.9E-21 143.0 9.1 127 185-313 5-135 (141)
23 3b7y_A E3 ubiquitin-protein li 99.7 8.1E-16 2.8E-20 140.8 13.1 122 201-330 20-148 (153)
24 2dmg_A KIAA1228 protein; beta- 99.7 2.3E-16 7.8E-21 142.7 9.3 126 185-312 8-136 (142)
25 2d8k_A Synaptotagmin VII; exoc 99.6 4.9E-16 1.7E-20 140.3 11.4 124 185-311 10-135 (141)
26 2bwq_A Regulating synaptic mem 99.6 6.4E-16 2.2E-20 137.1 11.8 106 47-165 18-129 (129)
27 2chd_A Rabphilin-3A, exophilin 99.6 2.5E-16 8.5E-21 142.4 9.2 112 185-298 13-127 (142)
28 1a25_A CALB, protein kinase C 99.6 1E-15 3.6E-20 139.6 13.4 107 47-166 31-139 (149)
29 3fdw_A Synaptotagmin-like prot 99.6 5.5E-16 1.9E-20 141.3 11.5 108 47-166 23-134 (148)
30 2chd_A Rabphilin-3A, exophilin 99.6 8.2E-16 2.8E-20 139.0 12.4 108 47-166 29-140 (142)
31 1a25_A CALB, protein kinase C 99.6 3.5E-16 1.2E-20 142.7 10.0 124 185-313 17-141 (149)
32 3rdl_A Protein kinase C alpha 99.6 1.2E-15 4.3E-20 136.6 13.4 107 47-166 16-124 (137)
33 3f04_A Synaptotagmin-1; C2A, c 99.6 6.1E-16 2.1E-20 140.0 11.2 107 46-166 33-142 (143)
34 1rsy_A Synaptotagmin I; calciu 99.6 5.6E-16 1.9E-20 141.9 10.6 124 185-311 26-150 (152)
35 1wfm_A Synaptotagmin XIII; C2 99.6 1.3E-15 4.5E-20 137.3 12.8 124 185-313 10-134 (138)
36 3f04_A Synaptotagmin-1; C2A, c 99.6 4.4E-16 1.5E-20 140.9 9.7 121 185-310 18-141 (143)
37 2q3x_A Regulating synaptic mem 99.6 1.2E-15 4.3E-20 142.6 12.9 107 47-166 30-139 (171)
38 2cm5_A Rabphilin-3A; protein t 99.6 2.5E-16 8.5E-21 146.5 8.0 124 185-311 21-145 (166)
39 1rsy_A Synaptotagmin I; calciu 99.6 1.4E-15 4.7E-20 139.3 12.8 106 47-166 42-150 (152)
40 2d8k_A Synaptotagmin VII; exoc 99.6 1.3E-15 4.5E-20 137.5 12.3 106 47-166 26-135 (141)
41 2q3x_A Regulating synaptic mem 99.6 1E-15 3.6E-20 143.1 12.0 123 185-313 16-141 (171)
42 3fbk_A RGS3, RGP3, regulator o 99.6 9.4E-16 3.2E-20 140.6 11.2 126 185-313 11-139 (153)
43 3m7f_B E3 ubiquitin-protein li 99.6 2E-15 6.7E-20 141.8 13.1 121 201-330 8-136 (176)
44 3n5a_A Synaptotagmin-7; calciu 99.6 3.8E-16 1.3E-20 140.1 7.7 122 187-311 2-124 (138)
45 2enp_A B/K protein; C2 type 1, 99.6 1.4E-15 4.8E-20 138.3 11.1 125 185-313 10-142 (147)
46 1rh8_A Piccolo protein; beta-s 99.6 3.4E-16 1.1E-20 141.5 6.7 109 47-166 18-138 (142)
47 1ugk_A Synaptotagmin IV, KIAA1 99.6 2.9E-15 1E-19 134.7 12.5 106 47-166 22-133 (138)
48 1w15_A Synaptotagmin IV; metal 99.6 2.1E-15 7.1E-20 138.1 11.6 124 185-311 14-138 (153)
49 2dmh_A Myoferlin; beta-sandwic 99.6 2.3E-15 7.8E-20 135.6 11.6 116 202-330 8-128 (140)
50 1v27_A Regulating synaptic mem 99.6 1.1E-15 3.7E-20 137.7 9.4 107 47-166 21-133 (141)
51 2dmg_A KIAA1228 protein; beta- 99.6 1.2E-15 4.1E-20 137.8 9.3 107 47-166 24-135 (142)
52 3fbk_A RGS3, RGP3, regulator o 99.6 3.4E-15 1.2E-19 136.9 12.3 107 47-166 27-137 (153)
53 1tjx_A Similar to synaptotagmi 99.6 6.5E-15 2.2E-19 135.8 14.0 108 47-166 25-147 (159)
54 3n5a_A Synaptotagmin-7; calciu 99.6 6.6E-15 2.2E-19 132.0 13.3 94 47-152 16-112 (138)
55 1tjx_A Similar to synaptotagmi 99.6 3.2E-15 1.1E-19 137.9 11.5 111 185-296 9-120 (159)
56 1rh8_A Piccolo protein; beta-s 99.6 5.2E-16 1.8E-20 140.2 5.8 123 185-311 4-138 (142)
57 3kwu_A MUNC13-1; calcium bindi 99.6 5.1E-15 1.8E-19 134.7 12.4 114 201-330 17-142 (148)
58 1wfm_A Synaptotagmin XIII; C2 99.6 3.3E-15 1.1E-19 134.6 10.9 104 47-166 26-132 (138)
59 2enp_A B/K protein; C2 type 1, 99.6 2.7E-15 9.1E-20 136.5 10.0 106 47-166 26-141 (147)
60 1w15_A Synaptotagmin IV; metal 99.6 7.5E-15 2.6E-19 134.4 12.9 93 47-151 30-125 (153)
61 3pyc_A E3 ubiquitin-protein li 99.6 1.1E-14 3.9E-19 129.8 13.0 117 203-330 7-128 (132)
62 2b3r_A Phosphatidylinositol-4- 99.6 6.5E-15 2.2E-19 132.0 9.7 118 188-311 9-130 (134)
63 2cm5_A Rabphilin-3A; protein t 99.6 2.1E-14 7.3E-19 133.3 13.5 94 47-152 37-133 (166)
64 2r83_A Synaptotagmin-1; C2A-C2 99.5 5.9E-14 2E-18 141.5 16.2 138 186-330 4-142 (284)
65 1wfj_A Putative elicitor-respo 99.5 1.3E-14 4.3E-19 130.0 9.9 113 202-331 11-126 (136)
66 1dqv_A Synaptotagmin III; beta 99.5 4.8E-14 1.7E-18 143.3 14.5 136 185-330 4-144 (296)
67 2fk9_A Protein kinase C, ETA t 99.5 2.4E-14 8.3E-19 131.8 9.7 90 201-299 29-129 (157)
68 2nq3_A Itchy homolog E3 ubiqui 99.5 6.3E-14 2.2E-18 131.3 12.8 116 201-331 36-157 (173)
69 1rlw_A Phospholipase A2, CALB 99.5 1.7E-14 5.6E-19 127.4 7.6 103 202-310 4-110 (126)
70 1gmi_A Protein kinase C, epsil 99.5 3.2E-14 1.1E-18 127.7 9.6 89 202-299 7-107 (136)
71 3jzy_A Intersectin 2; C2 domai 99.5 7.6E-14 2.6E-18 152.3 13.0 114 47-195 387-505 (510)
72 3nsj_A Perforin-1; pore formin 99.5 2.3E-13 7.8E-18 148.5 12.9 96 47-164 394-491 (540)
73 3jzy_A Intersectin 2; C2 domai 99.3 4.2E-12 1.4E-16 138.5 12.5 91 201-299 387-478 (510)
74 3nsj_A Perforin-1; pore formin 99.3 6.8E-12 2.3E-16 136.9 12.3 86 202-295 395-481 (540)
75 1cjy_A CPLA2, protein (cytosol 99.3 2.4E-12 8.2E-17 144.8 8.4 105 47-166 18-126 (749)
76 1djx_A PLC-D1, phosphoinositid 99.3 1.3E-11 4.4E-16 137.4 13.9 105 47-166 497-605 (624)
77 2cjt_A UNC-13 homolog A, MUNC1 99.3 2.3E-11 8E-16 108.5 11.1 94 47-164 5-102 (131)
78 3l9b_A Otoferlin; C2-domain, b 99.2 6.8E-11 2.3E-15 105.4 11.5 112 53-200 28-142 (144)
79 2cjt_A UNC-13 homolog A, MUNC1 99.2 4.2E-11 1.4E-15 106.8 9.4 81 203-298 7-89 (131)
80 2cjs_A UNC-13 homolog A, MUNC1 99.2 9.3E-11 3.2E-15 109.0 11.5 86 47-156 14-101 (167)
81 3pfq_A PKC-B, PKC-beta, protei 99.1 9E-11 3.1E-15 132.5 10.4 122 185-311 158-280 (674)
82 3l9b_A Otoferlin; C2-domain, b 99.1 2.9E-10 1E-14 101.3 10.2 100 203-313 23-124 (144)
83 3pfq_A PKC-B, PKC-beta, protei 99.1 2.2E-10 7.6E-15 129.2 11.1 106 48-166 173-280 (674)
84 2cjs_A UNC-13 homolog A, MUNC1 99.1 2.3E-10 7.7E-15 106.4 7.8 81 203-298 16-98 (167)
85 1cjy_A CPLA2, protein (cytosol 99.1 9.4E-11 3.2E-15 131.9 6.2 103 201-309 18-124 (749)
86 1djx_A PLC-D1, phosphoinositid 99.0 5.1E-10 1.7E-14 124.6 10.6 106 202-313 498-607 (624)
87 3bxj_A RAS GTPase-activating p 98.8 3.2E-10 1.1E-14 122.9 -0.4 100 48-166 12-116 (483)
88 3ohm_B 1-phosphatidylinositol- 98.8 1.1E-08 3.8E-13 117.0 11.8 96 48-166 726-826 (885)
89 3qr0_A Phospholipase C-beta (P 98.8 2E-08 6.7E-13 114.2 12.3 97 48-166 651-752 (816)
90 3bxj_A RAS GTPase-activating p 98.8 6.7E-10 2.3E-14 120.3 -0.0 100 201-313 11-118 (483)
91 2zkm_X 1-phosphatidylinositol- 98.8 2.5E-08 8.6E-13 113.7 12.2 97 48-166 679-780 (799)
92 3ohm_B 1-phosphatidylinositol- 98.5 2.3E-07 8E-12 106.1 9.3 98 203-313 727-828 (885)
93 2zkm_X 1-phosphatidylinositol- 98.4 4.2E-07 1.4E-11 103.7 9.2 98 203-313 680-782 (799)
94 2enj_A NPKC-theta, protein kin 98.3 9.7E-06 3.3E-10 71.1 12.8 112 47-197 10-129 (138)
95 3qr0_A Phospholipase C-beta (P 98.3 3.3E-06 1.1E-10 96.1 12.7 98 203-313 652-754 (816)
96 1yrk_A NPKC-delta, protein kin 98.3 2.1E-05 7E-10 68.1 14.3 93 65-196 25-123 (126)
97 4hqf_A Thrombospondin-related 97.9 0.00017 5.8E-09 71.9 15.2 155 349-529 21-180 (281)
98 4hqo_A Sporozoite surface prot 97.9 7.7E-05 2.6E-09 74.0 12.2 155 349-529 18-177 (266)
99 3n2n_F Anthrax toxin receptor 97.8 0.00024 8.1E-09 65.7 13.3 151 349-529 7-159 (185)
100 2xgg_A Microneme protein 2; A/ 97.8 6.4E-05 2.2E-09 69.6 8.6 141 349-518 17-162 (178)
101 1shu_X Anthrax toxin receptor 97.8 0.00021 7.2E-09 65.8 12.1 148 350-529 7-156 (182)
102 3ibs_A Conserved hypothetical 97.7 0.00032 1.1E-08 66.7 12.9 140 349-518 11-150 (218)
103 1mf7_A Integrin alpha M; cell 97.7 2.6E-05 8.8E-10 73.2 5.1 149 350-529 6-163 (194)
104 1n3y_A Integrin alpha-X; alpha 97.7 6E-05 2.1E-09 70.7 7.5 149 350-529 10-167 (198)
105 1q0p_A Complement factor B; VO 97.6 0.00028 9.4E-09 67.2 10.8 155 347-530 13-193 (223)
106 2b2x_A Integrin alpha-1; compu 97.6 0.001 3.5E-08 63.7 14.9 137 349-518 22-164 (223)
107 1ijb_A VON willebrand factor; 97.6 0.00031 1.1E-08 66.4 10.6 147 349-527 13-167 (202)
108 2x5n_A SPRPN10, 26S proteasome 97.5 0.0017 5.9E-08 61.1 15.0 148 351-527 4-156 (192)
109 4fx5_A VON willebrand factor t 97.5 0.0011 3.7E-08 71.1 15.3 155 347-528 75-231 (464)
110 1v7p_C Integrin alpha-2; snake 97.4 0.0009 3.1E-08 62.9 11.3 134 350-516 7-146 (200)
111 1pt6_A Integrin alpha-1; cell 97.4 0.00094 3.2E-08 63.4 11.4 137 349-518 7-149 (213)
112 1atz_A VON willebrand factor; 97.3 0.0008 2.7E-08 62.6 9.6 147 349-529 5-158 (189)
113 2odp_A Complement C2; C3/C5 co 97.2 0.0026 8.7E-08 68.7 13.2 156 346-530 6-187 (509)
114 2x31_A Magnesium-chelatase 60 97.1 8.3E-05 2.8E-09 69.3 0.3 145 349-527 5-161 (189)
115 4b4t_W RPN10, 26S proteasome r 97.0 0.011 3.7E-07 58.4 15.0 147 352-527 6-158 (268)
116 1yrk_A NPKC-delta, protein kin 97.0 0.006 2E-07 52.8 10.5 69 221-299 26-96 (126)
117 3zqk_A VON willebrand factor; 96.8 0.0013 4.4E-08 61.9 6.1 143 348-528 20-169 (199)
118 2enj_A NPKC-theta, protein kin 96.8 0.0062 2.1E-07 53.4 9.8 69 221-299 31-101 (138)
119 3hrz_D Complement factor B; se 96.7 0.008 2.7E-07 67.9 12.5 155 346-529 240-420 (741)
120 1rrk_A Complement factor B; BB 96.7 0.0083 2.8E-07 64.4 11.7 155 350-529 2-178 (497)
121 1mjn_A Integrin alpha-L; rossm 96.6 0.0024 8.1E-08 59.0 6.0 143 349-528 2-152 (179)
122 3k6s_A Integrin alpha-X; cell 96.6 0.0028 9.4E-08 74.9 7.7 150 349-529 130-288 (1095)
123 1jey_A KU70; double-strand DNA 95.0 0.11 3.8E-06 57.4 11.6 155 351-521 37-212 (609)
124 1jey_B KU80; double-strand DNA 94.7 0.14 4.7E-06 56.1 11.2 155 346-518 4-170 (565)
125 1yvr_A RO autoantigen, 60-kDa 93.4 0.59 2E-05 50.7 12.8 138 347-521 366-507 (538)
126 2nvo_A RO sixty-related protei 91.7 1.2 4E-05 48.3 12.4 136 348-521 361-503 (535)
127 3l4c_A Dedicator of cytokinesi 75.9 23 0.0008 33.4 11.2 43 82-124 75-119 (220)
128 2ww8_A RRGA, cell WALL surface 59.8 21 0.00072 40.9 8.7 42 449-492 351-392 (893)
129 3rag_A Uncharacterized protein 59.4 6.9 0.00023 37.6 3.9 39 478-519 9-50 (242)
130 2iue_A Pactolus I-domain; memb 52.4 45 0.0015 31.2 8.2 111 349-492 3-118 (212)
131 3l4c_A Dedicator of cytokinesi 34.9 79 0.0027 29.7 6.8 56 238-295 76-138 (220)
132 2wxf_A Phosphatidylinositol-4, 31.0 94 0.0032 35.8 7.9 92 202-298 218-325 (940)
133 1e7u_A Phosphatidylinositol 3- 28.7 2.3E+02 0.0079 32.6 10.6 85 66-151 237-329 (961)
134 3hhm_A Phosphatidylinositol-4, 28.2 2.4E+02 0.0082 32.9 10.6 98 46-151 354-454 (1091)
135 3fcs_B Integrin beta-3; beta p 27.7 79 0.0027 35.0 6.4 51 439-491 200-255 (690)
136 2wxf_A Phosphatidylinositol-4, 27.5 2.3E+02 0.008 32.5 10.4 103 46-151 216-323 (940)
137 2yrb_A Protein fantom; beta sa 23.3 3.3E+02 0.011 24.0 8.4 96 46-157 17-121 (156)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.1e-31 Score=271.86 Aligned_cols=222 Identities=21% Similarity=0.319 Sum_probs=185.4
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||+|++.+... ...||+++++|+||.|+|+|.|.+.+++ .+.|+|+|||.|
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 556666 6899999999999999999999986333 4789999999999999999999877654 369999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccccccccccccccCCCCCCCcccceEEeecceecccccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSKTT 203 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~~~~~~ 203 (561)
.. +++++||++.++|.++........|++|... ... .....|.|.+.+.+.+....+
T Consensus 96 ~~-----------~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~----------~~~--~~~~~G~i~l~l~~~p~~~~l 152 (284)
T 2r83_A 96 RF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA----------EKE--EQEKLGDICFSLRYVPTAGKL 152 (284)
T ss_dssp SS-----------SCCCEEEEEEEEGGGCCCSSCEEEEEECBCC----------SSC--CCCCCCEEEEEEEEETTTTEE
T ss_pred CC-----------CCCceeEEEEEcchhcccCCcceeEEEeecc----------ccc--cccccccEEEEEEecCcCCce
Confidence 65 6899999999999999877777789999651 110 124579999999988888888
Q ss_pred ceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCC-CCccEEEEEEeccCC
Q 008558 204 TELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGS-KDSPLIIECFNFNSN 281 (561)
Q Consensus 204 v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d-~~~~L~ieV~D~d~~ 281 (561)
.+.+++|++|+.+|.+|.+|||+++++..+ +.....+||+++++++||+|++ |.+.+.. .+ ....|.|+|||++..
T Consensus 153 ~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~l~~~~l~i~V~d~d~~ 230 (284)
T 2r83_A 153 TVVILEAKNLKKMDVGGLSDPYVKIHLMQN-GKRLKKKKTTIKKNTLNPYYNESFSFEVPF-EQIQKVQVVVTVLDYDKI 230 (284)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEEET-TEEEEEEECCCCCSCSSCEEEEEEEEECCT-TTGGGEEEEEEEEECCSS
T ss_pred EEEEEEeECCCCcCCCCCcCeEEEEEEEeC-CcEeeeeccceecCCCCCEEceeEEEeCCH-HHhCceEEEEEEEeCCCC
Confidence 889999999999999999999999998763 5556789999999999999998 5554421 11 135799999999999
Q ss_pred CCCceeEEEEEehhh
Q 008558 282 GKHDLIGKVQKSLAD 296 (561)
Q Consensus 282 g~~d~IG~~~i~l~~ 296 (561)
+++++||++.+++..
T Consensus 231 ~~~~~iG~~~i~l~~ 245 (284)
T 2r83_A 231 GKNDAIGKVFVGYNS 245 (284)
T ss_dssp SCCCEEEEEEEETTC
T ss_pred CCCcEEEEEEECCCC
Confidence 999999999999975
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=2.2e-31 Score=271.84 Aligned_cols=221 Identities=22% Similarity=0.363 Sum_probs=180.9
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCce--eEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~--q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||++++.++.. ...||+++++|+||.|+|+|.|.+.+++. ..|+|+|||+|
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCC---eeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 556666 6999999999999999999999865222 57899999999999999999998877653 48999999999
Q ss_pred CCcccccccccccccceeeeeeEee-chhhhc-cCCeeEEEEccccccccccccccCCCCCCCcccceEEeecceecccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCT-LSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSK 201 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~-L~el~~-~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~~~~ 201 (561)
.. +++++||++.++ +.++.. ......|++|.. ..+ .....|+|.+.+.+.+...
T Consensus 97 ~~-----------~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~i~vsl~y~~~~~ 152 (296)
T 1dqv_A 97 RF-----------SRHDLIGQVVLDNLLELAEQPPDRPLWRDILE-----------GGS--EKADLGELNFSLCYLPTAG 152 (296)
T ss_dssp SS-----------SCCCEEEEEECCCTTGGGSSCSSCCCCEECBC-----------CSS--CCSCCCEEEEEEEEETTTT
T ss_pred CC-----------CCCceEEEEEeccccccccCCccceeeecccc-----------ccc--cccccceEEEEEEeccccc
Confidence 65 789999999995 555554 223456888865 111 1245799999999988888
Q ss_pred ccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeee--eecCCCCccEEEEEEec
Q 008558 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNI--QQVGSKDSPLIIECFNF 278 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~--~~l~d~~~~L~ieV~D~ 278 (561)
.+.+.+++|++|+.+|.+|.+|||+++++.. ++++...+||+++++++||+||+ |.+.+ ..+. ...|.|+|||+
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~--~~~L~i~V~d~ 229 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLIS-EGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVE--NVGLSIAVVDY 229 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCT-TCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGG--SCCCCCEEEEC
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEe-CCcCccceecceecCCCCCeECceEEEEcCHHHcc--CcEEEEEEEeC
Confidence 8888899999999999999999999999875 35556789999999999999998 44433 2221 45799999999
Q ss_pred cCCCCCceeEEEEEehhhH
Q 008558 279 NSNGKHDLIGKVQKSLADL 297 (561)
Q Consensus 279 d~~g~~d~IG~~~i~l~~l 297 (561)
+..+++++||++.+++.++
T Consensus 230 d~~~~~~~iG~~~i~l~~~ 248 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAA 248 (296)
T ss_dssp CSSSCCEEEEECCCSSCTT
T ss_pred CCCCCCceEEEEEECCccC
Confidence 9999999999999999877
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.75 E-value=1.5e-17 Score=152.32 Aligned_cols=126 Identities=20% Similarity=0.345 Sum_probs=96.8
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccCC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~~ 125 (561)
..+.++ ++|++|+.+|..+++||||+|++......|....||+++++++||.|+|.|.|.+..+ .+.|+|+|||+|..
T Consensus 20 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~d~~ 98 (153)
T 3b7y_A 20 RIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDENRL 98 (153)
T ss_dssp EEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEECCSS
T ss_pred cEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEECCCC
Confidence 567776 6999999999999999999999986455567899999999999999999999887654 46899999999865
Q ss_pred cccccccccccccceeeeeeEeechhhhccCCe------eEEEEccccccccccccccCCCCCCCcccceEEeeccee
Q 008558 126 FHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR------SLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (561)
Q Consensus 126 ~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~------~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i 197 (561)
+++++||++.++|.++...... ..|++|.. +.+ .....|+|.++..++
T Consensus 99 -----------~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 99 -----------TRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHP-----------RSH--KSRVKGYLRLKMTYL 152 (153)
T ss_dssp -----------SCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBC-----------SST--TCCCCSEEEEEEEEC
T ss_pred -----------cCCCeeEEEEEEHHHcccCCCccccccccccccccc-----------ccC--CCCcceEEEEEEEEe
Confidence 6899999999999999876543 47999965 211 225579999987654
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=3.3e-17 Score=146.57 Aligned_cols=125 Identities=21% Similarity=0.297 Sum_probs=100.9
Q ss_pred CCCCCcccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEE
Q 008558 40 RGYLGLFSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFR 118 (561)
Q Consensus 40 ~~~~~~~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~ 118 (561)
..+......++++ ++|++|+++|..+++||||++++.+ +..||+++++++||.|+|+|.|.+.. ..+.|+|+
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~~-~~~~l~i~ 78 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIKD-IHDVLEVT 78 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSSCSSCCCCEEEEEEESC-TTCEEEEE
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecCCCCCccccEEEEEecC-CCCEEEEE
Confidence 3444555778887 6999999999999999999999964 46799999999999999999988763 34689999
Q ss_pred EEEccCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccccccccccccccCCCCCCCcccceEEeeccee
Q 008558 119 IYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (561)
Q Consensus 119 VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i 197 (561)
|||+|.. +++++||++.++|.++.. +...|++|.. ... .....|+|++....+
T Consensus 79 V~d~d~~-----------~~~~~lG~~~i~l~~l~~--~~~~w~~L~~-----------~~~--~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 79 VFDEDGD-----------KPPDFLGKVAIPLLSIRD--GQPNCYVLKN-----------KDL--EQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEETT-----------EEEEECCBCEEEGGGCCS--SCCEECCCBC-----------SCT--TSCCSSEEEEEEEEE
T ss_pred EEECCCC-----------CCCCeeEEEEEEHHHccC--CCceEEEeec-----------CCC--CCccceEEEEEEEEE
Confidence 9999975 689999999999999965 3457999965 221 124579999877654
No 5
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=7.4e-17 Score=151.55 Aligned_cols=129 Identities=19% Similarity=0.326 Sum_probs=98.1
Q ss_pred ccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccC
Q 008558 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (561)
Q Consensus 46 ~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~ 124 (561)
...+.++ ++|++|+.+|..+++||||+|++......|....||+++++++||.|++.|.|.+..+ .+.|+|+|||+|.
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDENR 85 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEECC-
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEECCC
Confidence 3567776 6999999999999999999999987556677899999999999999999999887644 4689999999986
Q ss_pred CcccccccccccccceeeeeeEeechhhhccCCe--e----EEEEccccccccccccccCCCCCCCcccceEEeecceec
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR--S----LTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECI 198 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~--~----~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~ 198 (561)
. ++++|||++.++|.++...... . .|++|.. +.. ..+..|+|.+++.+++
T Consensus 86 ~-----------~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 86 L-----------TRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP-----------RSH--KSRVKGYLRLKMTYLP 141 (176)
T ss_dssp --------------CEEEEEEEEESCSCCBC------CCCCEEEECBC-----------SST--TCCCCSEEEEEEEECC
T ss_pred C-----------CCCcEEEEEEEEHHHccccCCcccccccccEEEccc-----------cCC--CCccCEEEEEEEEEEe
Confidence 5 6899999999999999875433 1 6999965 222 2356799999887765
Q ss_pred c
Q 008558 199 N 199 (561)
Q Consensus 199 ~ 199 (561)
.
T Consensus 142 ~ 142 (176)
T 3m7f_B 142 K 142 (176)
T ss_dssp -
T ss_pred C
Confidence 4
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.71 E-value=1.5e-16 Score=144.93 Aligned_cols=131 Identities=18% Similarity=0.325 Sum_probs=97.8
Q ss_pred CcccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEc
Q 008558 44 GLFSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (561)
Q Consensus 44 ~~~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~ 122 (561)
.....+.++ ++|++|+.+|..+++||||++++.. +..||+++++|+||.|++.|.|.+.... +.|+|+|||+
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~d~ 86 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDE 86 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEEEEC
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEEEEC
Confidence 345678887 6999999999999999999999943 5789999999999999999998876543 6899999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccccccccccccccCCCCCCCcccceEEeecce
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEE 196 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~ 196 (561)
|......-......+++++||++.++|.++. .....|++|.. ... .....|+|.++...
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~-----------~~~--~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDK-----------RTD--KSAVSGAIRLHISV 145 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBC-----------SST--TCCCCCEEEEEEEE
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEccc-----------CCC--CCCCceEEEEEEEE
Confidence 8620000000001257999999999999993 34568999965 211 22457999887653
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=143.59 Aligned_cols=121 Identities=21% Similarity=0.280 Sum_probs=98.9
Q ss_pred ccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeC---ceeEEEEEEEE
Q 008558 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE---VVQTLVFRIYD 121 (561)
Q Consensus 46 ~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe---~~q~L~~~VyD 121 (561)
...+.++ ++|++|+.+|. +++||||++++.. +..||+++++++||+|+|.|.|.+..+ ..+.|+|+|||
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD------EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS------CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC------EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 3567776 69999999999 9999999999964 468999999999999999999887542 45799999999
Q ss_pred ccCCcccccccccccccceeeeeeEeechhhhccCCeeEEEE---ccccccccccccccCCCCCCCcccceEEeecceec
Q 008558 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLD---LVRREETITPITEESNPSNRPKHCGKLTVHAEECI 198 (561)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~---L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~ 198 (561)
+|.. +++++||++.++|.++........|++ |.+ .. .....|+|.+++.+.+
T Consensus 79 ~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-----------~~---~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 79 FETI-----------GQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-----------EK---GQDTGATIDLVIGYDP 133 (140)
T ss_dssp TTCS-----------SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-----------TT---CCEEEEEEEEEEEECC
T ss_pred CCCC-----------CCCceEEEEEEEHHHhccCCCceeEEeeeeccC-----------CC---CCCCCCEEEEEEEEEC
Confidence 9965 689999999999999987777777887 543 11 1144699998877654
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=5.6e-17 Score=143.42 Aligned_cols=118 Identities=18% Similarity=0.272 Sum_probs=97.9
Q ss_pred cEEEEE-EEEcCCCCC---CCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDR---DVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~---D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+++ |..+++||||++++.+... ...||+++++++||+|+|+|.|.+.....+.|+|+|||+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~ 79 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEEC
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEEC
Confidence 456666 699999994 7789999999999975322 588999999999999999999998766778999999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccccccccccccccCCCCCCCcccceEEeeccee
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i 197 (561)
|.. ++++||++.++|.++........|++|.. ...|.|+++++..
T Consensus 80 d~~------------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------------------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 80 NYV------------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------------------VTEMVLEMSLEVA 124 (126)
T ss_dssp CSS------------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------------------TEEEEEEEEEECC
T ss_pred CCC------------CCceeEEEEEEHHHccCCCcEEEEEEcCC------------------CceEEEEEEEEeC
Confidence 853 48899999999999987766778999954 3358888887654
No 9
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=1.1e-17 Score=154.19 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=100.5
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeee-
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ- 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~- 262 (561)
...|+|.+++.+......+.+.+++|+||+++|.+|++|||+++++...++.....+||+++++|+||+||| |.|.+.
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 347999999999888888999999999999999999999999999976433434579999999999999998 665542
Q ss_pred -ecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhh-ccCCCceeeee
Q 008558 263 -QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK-LHSSGQGQNLF 310 (561)
Q Consensus 263 -~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~-~~~~~~~~~l~ 310 (561)
.+ ..+.|.|+|||+|..+++++||++.+++.++.. ......|++|+
T Consensus 107 ~~l--~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PAL--HQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHH--HHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHh--CcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 22 146899999999999999999999999999842 12223455553
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.68 E-value=4e-16 Score=139.34 Aligned_cols=120 Identities=22% Similarity=0.377 Sum_probs=92.4
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccCC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~~ 125 (561)
.+++++ ++|++|+++|..+++||||++++... + +..||+++++|+||.|++.|.|.+... +.|+|+|||+|..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~---~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-G---QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-C---CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGT
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-C---ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCC
Confidence 456666 69999999999999999999999542 2 589999999999999999998877544 3599999999965
Q ss_pred ccccccccccccc---ceeeeeeEeechhhhc-cCCeeEEEEccccccccccccccCCCCCCCcccceEEeec
Q 008558 126 FHNVDVKTLKLVE---QQFLGEATCTLSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHA 194 (561)
Q Consensus 126 ~~~~~~~~~~l~~---~d~LG~~~~~L~el~~-~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~ 194 (561)
++ ++|||++.+++.+|.. ......|++|.. +.+....+..|+|.+..
T Consensus 79 -----------~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~-----------~~~~~~~~~~G~i~v~l 129 (132)
T 3pyc_A 79 -----------HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK-----------LNPSDTDAVRGQIVVSL 129 (132)
T ss_dssp -----------TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBC-----------SSTTCCCCCCSEEEEEE
T ss_pred -----------CCCCCCCceEEEEEeHHHhhcccccCcEEEeeee-----------cCCCCCCceeEEEEEEE
Confidence 33 7999999999999833 333457888865 11100224579998865
No 11
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.68 E-value=1.3e-16 Score=143.13 Aligned_cols=123 Identities=23% Similarity=0.306 Sum_probs=99.9
Q ss_pred CCcccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeec-CCCCCceeeeEEEEEeeCceeEEEEEEE
Q 008558 43 LGLFSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIY 120 (561)
Q Consensus 43 ~~~~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~-n~lNP~w~e~f~i~~~fe~~q~L~~~Vy 120 (561)
......++++ ++|++|+.+|..+++||||+|++.+ ...||++++ +++||.|+|+|.|.+.. ..+.|+|+||
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~ 78 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT------QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIF 78 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS------CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEEC
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC------ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEE
Confidence 3445677887 6999999999999999999999865 357999999 89999999999988764 5679999999
Q ss_pred EccCCcccccccccccccceeeeeeEeechhhhcc-CCeeEEEEccccccccccccccCCCCCCCcccceEEeecceecc
Q 008558 121 DVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTR-KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECIN 199 (561)
Q Consensus 121 D~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~-~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~~ 199 (561)
|+|.. +++++||++.++|.++... .....|++|.. ..+..|+|.++....+.
T Consensus 79 d~~~~-----------~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~----------------~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 79 DKDVG-----------TEDDAVGEATIPLEPVFVEGSIPPTAYNVVK----------------DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp CSSSC-----------TTTCCSEEEEEESHHHHHHSEEEEEEEEEEE----------------TTEEEEEEEEEEEEEEC
T ss_pred ECCCC-----------CCCceEEEEEEEHHHhccCCCCCcEEEEeec----------------CCccCEEEEEEEEEEeC
Confidence 99865 6899999999999999543 23457888853 12557999998877654
No 12
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=145.75 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=85.4
Q ss_pred ccEEEEE-EEEcCCCCCCCC----------CCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeE
Q 008558 46 FSQIELS-FSAADLRDRDVL----------SKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQT 114 (561)
Q Consensus 46 ~~~vel~-isa~~L~~~D~~----------sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~ 114 (561)
...+.++ ++|++|+++|.. +.+||||+|++.+ .+++||+++++|+||.|+|.|.|... ..+.
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-----~~~~kT~v~~ktlnP~WNE~F~f~v~--~~~~ 100 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-----VRVGQTSTKQKTNKPTYNEEFCANVT--DGGH 100 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEE--EECE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-----EeeEEeeecCCCCCCccCcEEEEEcC--CCCE
Confidence 3567776 699999999942 6799999999953 25789999999999999999988764 3469
Q ss_pred EEEEEEEccCCcccccccccccccceeeeeeEeechhhhcc----CCeeEEEEccc
Q 008558 115 LVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTR----KNRSLTLDLVR 166 (561)
Q Consensus 115 L~~~VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~----~~~~~~~~L~~ 166 (561)
|.|+|||+|.. +++||||++.++|.++... .....|++|.+
T Consensus 101 L~~~V~D~d~~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 101 LELAVFHETPL-----------GYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp EEEEEEECCSS-----------SSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred EEEEEEECCCC-----------CCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 99999999865 7899999999999999865 44568999943
No 13
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.68 E-value=2.5e-16 Score=141.54 Aligned_cols=112 Identities=13% Similarity=0.240 Sum_probs=92.0
Q ss_pred cEEEEE-EEEcCCCCCCCCCC-----------CCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeE
Q 008558 47 SQIELS-FSAADLRDRDVLSK-----------SDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQT 114 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sk-----------sDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~ 114 (561)
..++++ ++|++|+++|..++ +||||+|++.. ..++||+++++|+||.|+|.|.|.+... +.
T Consensus 6 g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-----~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~ 78 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred eEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-----eEeeeeeEECCCcCCccCCEEEEEecCC--CE
Confidence 567777 59999999997655 99999999843 2578999999999999999999886543 79
Q ss_pred EEEEEEEccCCcccccccccccccceeeeeeEeechhhhccCC--eeEEEEccccccccccccccCCCCCCCcccceEEe
Q 008558 115 LVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN--RSLTLDLVRREETITPITEESNPSNRPKHCGKLTV 192 (561)
Q Consensus 115 L~~~VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~--~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i 192 (561)
|+|+|||+|.. +++++||++.++|.++..... ...|++|.. .|+|++
T Consensus 79 L~~~V~d~d~~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------------------~G~i~l 127 (136)
T 1gmi_A 79 IELAVFHDAPI-----------GYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------------------EGKVYV 127 (136)
T ss_dssp EEEEEEECCSS-----------SSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------------------SCEEEE
T ss_pred EEEEEEeCCCC-----------CCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------------------CeEEEE
Confidence 99999999865 789999999999999987543 267888843 488888
Q ss_pred ecce
Q 008558 193 HAEE 196 (561)
Q Consensus 193 ~~e~ 196 (561)
.++.
T Consensus 128 ~l~~ 131 (136)
T 1gmi_A 128 IIDL 131 (136)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 14
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=145.19 Aligned_cols=126 Identities=11% Similarity=0.190 Sum_probs=102.1
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCC-CCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKD-LFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d-~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~ 262 (561)
..+|+|.+++++.+....+.+.+++|++|+.+| .+|++|||+++++... +.....+||+++++++||+|++ |.+.+.
T Consensus 7 ~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPD-KSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETC-CSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred ccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcC-CcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 557999999999988888999999999999998 6899999999998753 3445689999999999999998 555432
Q ss_pred ecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 263 QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 263 ~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
.-.-....|.|+|||++..+++++||++.++|.++........|++|..
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 1111245799999999999999999999999999974333445666654
No 15
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.67 E-value=3.9e-16 Score=140.05 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=90.4
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEE-EeeC--ceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~-~~fe--~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+. |..+++||||+|++.+ ++......||+++++|+||+|+|+|.|. +..+ ....|+|+|||+
T Consensus 20 ~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~ 97 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSA 97 (134)
T ss_dssp TEEEEEEEEEECCCC-TTSCCCCEEEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEEC
Confidence 557776 59999997 8889999999999975 3334568999999999999999999988 6654 346999999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.++........|++|.+
T Consensus 98 d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 98 ESL-----------RENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CSS-----------SCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCC-----------CCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 965 689999999999999987667778999965
No 16
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=147.32 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=89.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.+. ++|++|+++|..+++||||++++.+.++......||+++++|+||+|+|+|.|....+. ...|+|+|||+|
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 445554 69999999999999999999999863333335799999999999999999998865543 458999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhhhc-cCCeeEEEEcc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVT-RKNRSLTLDLV 165 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~-~~~~~~~~~L~ 165 (561)
.. +++++||++.++|.++.. ......|++|.
T Consensus 123 ~~-----------~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 123 RS-----------HLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp TT-----------SCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CC-----------CCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 75 789999999999999953 45667899884
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=1.6e-16 Score=141.04 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=94.7
Q ss_pred ccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeec
Q 008558 186 HCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV 264 (561)
Q Consensus 186 ~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l 264 (561)
..|+|.+++++......+.+.+++|++|+.+|.+|++|||++++...+ +.....+||+++++++||+|+| |.+.....
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS-CSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC-CCCCcceecccccCCCCCccccEEEEccCCH
Confidence 369999999998888888999999999999999999999999998753 3335689999999999999997 66653111
Q ss_pred -CCCCccEEEEEEeccCCCC--CceeEEEEEehhhHhhccCCCceeee
Q 008558 265 -GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNL 309 (561)
Q Consensus 265 -~d~~~~L~ieV~D~d~~g~--~d~IG~~~i~l~~l~~~~~~~~~~~l 309 (561)
......|.|+|||++..++ +++||++.+++.++. ..+...|++|
T Consensus 82 ~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~-~~~~~~W~~L 128 (129)
T 2bwq_A 82 REFRERMLEITLWDQARVREEESEFLGEILIELETAL-LDDEPHWYKL 128 (129)
T ss_dssp GGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCC-CSSCEEEEEC
T ss_pred HHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccC-CCcCCccEEC
Confidence 1125689999999999887 999999999999986 2333445554
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=3.6e-16 Score=140.70 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=94.1
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCC-CCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceee-e
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLF-SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-I 261 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~-g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~-~ 261 (561)
...|+|.+++++.+....+.+.+++|++|+.+|.+ |++|||+++++..+ + ...+||+++++++||+|+| |.|. +
T Consensus 6 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~-~--~~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 6 SGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-K--KHKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT-T--CSEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC-C--CceEecCcCcCCCCCcEeeEEEEcCc
Confidence 45799999999998888899999999999999986 89999999999753 2 2589999999999999997 6553 2
Q ss_pred eecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhh
Q 008558 262 QQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (561)
Q Consensus 262 ~~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~ 299 (561)
..-.-....|.|+|||++..+++++||++.++|.++..
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCC
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccC
Confidence 11011246899999999999999999999999999963
No 19
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.66 E-value=2.9e-16 Score=147.25 Aligned_cols=120 Identities=21% Similarity=0.303 Sum_probs=93.7
Q ss_pred ccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccC
Q 008558 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (561)
Q Consensus 46 ~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~ 124 (561)
..+++++ ++|++|++.+..+++||||+|++.+ +..||+++++++||+|+|.|.|.+. ..+.|+|+|||+|.
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~------~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~ 106 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDG------QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQT 106 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCS
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECC------EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCC
Confidence 3567776 6999999554455699999999953 6899999999999999999988763 46799999999996
Q ss_pred CcccccccccccccceeeeeeEeechhhhccCC-----eeEEEEccccccccccccccCCCCCCCcccceEEeeccee
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN-----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~-----~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i 197 (561)
. ++++|||++.++|.++..... ...|++|.. .++ .....|+|.+..+.+
T Consensus 107 ~-----------~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~-----------~~~--~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 107 L-----------KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGG-----------DKE--PTETIGDLSICLDGL 160 (173)
T ss_dssp S-----------SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEE-----------SSC--TTSEEEEEEEEEESE
T ss_pred C-----------CCCceEEEEEEEHHHhcccCCCCcceeEEEEECcc-----------CCC--CCcccEEEEEEEeee
Confidence 5 689999999999999975432 256888865 211 225679999887665
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.66 E-value=3.1e-16 Score=140.64 Aligned_cols=123 Identities=17% Similarity=0.329 Sum_probs=100.0
Q ss_pred ccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeec
Q 008558 186 HCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV 264 (561)
Q Consensus 186 ~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l 264 (561)
.+|+|.+++++ ..+.+.+.+++|++|+.+|.+|.+|||++++.... +.....++|+++++++||.|++ |.+.+..
T Consensus 3 ~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~~~~- 78 (137)
T 3rdl_A 3 KRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPD-PKNESKQKTKTIRSTLNPQWNESFTFKLKP- 78 (137)
T ss_dssp CCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECC-TTCCCCEECCCCCSCSSCEEEEEEEEECCG-
T ss_pred cceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcC-CCCCeeecCceEcCCCCCCcccEEEEEcCc-
Confidence 47999999988 45677888999999999999999999999998642 3345689999999999999998 6666532
Q ss_pred CCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 265 GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 265 ~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
.+....|.|+|||++..+++++||++.+++.++.. .....|++|.+..
T Consensus 79 ~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~-~~~~~W~~L~~~~ 126 (137)
T 3rdl_A 79 SDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMK-MPASGWYKLLNQE 126 (137)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHH-SCEEEEEECBCHH
T ss_pred hhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhcc-CccCceEECcCcc
Confidence 12245799999999999999999999999999974 3345677776543
No 21
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.66 E-value=1.6e-16 Score=142.06 Aligned_cols=118 Identities=16% Similarity=0.279 Sum_probs=94.8
Q ss_pred eccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEE
Q 008558 197 CINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIEC 275 (561)
Q Consensus 197 i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV 275 (561)
......+.+.+++|++|+.+|.+|++|||++++... ..+||+++++++||.|++ |.+... +....|.|+|
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~---~~~~~l~i~V 79 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIK---DIHDVLEVTV 79 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSSCSSCCCCEEEEEEES---CTTCEEEEEE
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecCCCCCccccEEEEEec---CCCCEEEEEE
Confidence 334455666789999999999999999999999843 367999999999999998 777764 3457899999
Q ss_pred EeccCCCCCceeEEEEEehhhHhhccCCCceeeeecccccCCCCcccccccEEEe
Q 008558 276 FNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 276 ~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
||++..+++++||++.+++.++. .+...+++|.++..+++ ..|+|+|.
T Consensus 80 ~d~d~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~-----~~G~i~l~ 127 (133)
T 2ep6_A 80 FDEDGDKPPDFLGKVAIPLLSIR--DGQPNCYVLKNKDLEQA-----FKGVIYLE 127 (133)
T ss_dssp EEEETTEEEEECCBCEEEGGGCC--SSCCEECCCBCSCTTSC-----CSSEEEEE
T ss_pred EECCCCCCCCeeEEEEEEHHHcc--CCCceEEEeecCCCCCc-----cceEEEEE
Confidence 99999989999999999999994 34556778876543222 18999983
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=1.7e-16 Score=143.01 Aligned_cols=127 Identities=14% Similarity=0.177 Sum_probs=102.3
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++++.+....+.+.+++|++|+.+|.+|++|||+++++..+ +.....+||+++++++||+|+| |.+..-.
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSC-CSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecC-CCCCcceeCccccCCCCCccccEEEEccCC
Confidence 4579999999998888888999999999999999999999999998652 2335688999999999999997 6665311
Q ss_pred c-CCCCccEEEEEEeccCCCC--CceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 264 V-GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 264 l-~d~~~~L~ieV~D~d~~g~--~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
. ......|.|+|||++..++ +++||++.+++.++. ......|++|...+
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~-~~~~~~W~~L~~~~ 135 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETAL-LDDEPHWYKLQTHD 135 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCC-CSSEEEEEECBCCS
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccC-CCCCCceEECcccc
Confidence 1 1124789999999999887 999999999999985 33334577776533
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.65 E-value=8.1e-16 Score=140.81 Aligned_cols=122 Identities=16% Similarity=0.330 Sum_probs=87.5
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
..+.+.+++|++|+.+|.+|++|||++++.......+...+||+++++++||+|++ |.+.+. .....|.|+|||++
T Consensus 20 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~---~~~~~l~~~V~d~d 96 (153)
T 3b7y_A 20 RIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH---PQQHRLLFEVFDEN 96 (153)
T ss_dssp EEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC---TTTCEEEEEEEECC
T ss_pred cEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec---CCCCEEEEEEEECC
Confidence 34556688999999999999999999999975433456789999999999999998 666653 23578999999999
Q ss_pred CCCCCceeEEEEEehhhHhhccCC------CceeeeecccccCCCCcccccccEEEe
Q 008558 280 SNGKHDLIGKVQKSLADLEKLHSS------GQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~~~~~------~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
..+++++||++.+++.++...... ..+++|.....++ +. .|+|+|.
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~----~~-~G~i~l~ 148 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS----RV-KGYLRLK 148 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC----CC-CSEEEEE
T ss_pred CCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC----Cc-ceEEEEE
Confidence 999999999999999999632221 2456654332111 12 8999984
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=2.3e-16 Score=142.65 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=99.9
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++++.+....+.+.+++|++|+.+|.+| +|||+++++..+ +.....+||+++++++||+|+| |.|.+..
T Consensus 8 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 8 SPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPD-KRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp CSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESC-CCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcC-CCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 457999999999888888899999999999999999 999999999753 3345689999999999999997 6655421
Q ss_pred cCCCCccEEEEEEeccCCCC--CceeEEEEEehhhHhhccCCCceeeeecc
Q 008558 264 VGSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~--~d~IG~~~i~l~~l~~~~~~~~~~~l~n~ 312 (561)
-.-....|.|+|||++..++ +++||++.+++.++........|++|...
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 10013589999999998764 47999999999998633334456777654
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=4.9e-16 Score=140.34 Aligned_cols=124 Identities=18% Similarity=0.299 Sum_probs=99.7
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++.+......+.+.+++|++|+.+|.+|++|||++++...+. ...+||+++++++||+|+| |.+....
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~~~~ 86 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDK---KHKLETKVKRKNLNPHWNETFLFEGFP 86 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCC---SSEEECCCCTTCSSCCCCEEEEECSCC
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCC---CccEeCceEcCCCCCccccEEEECccC
Confidence 45799999999988888899999999999999999999999999997532 2478999999999999998 6554211
Q ss_pred c-CCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 V-GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l-~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
. .-....|.|+|||++..+++++||++.+++.++........|++|..
T Consensus 87 ~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 87 YEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp HHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred HHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 1 01257899999999999999999999999999964222234566654
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=6.4e-16 Score=137.14 Aligned_cols=106 Identities=23% Similarity=0.327 Sum_probs=85.2
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEE-eeC--ceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~-~fe--~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+|..+++||||++++.+ ++......||+++++|+||.|+|+|.|.. ..+ ..+.|+|+|||+
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 567776 5999999999999999999999976 23334789999999999999999999874 333 346999999999
Q ss_pred cCCccccccccccccc--ceeeeeeEeechhhhccCCeeEEEEcc
Q 008558 123 DTQFHNVDVKTLKLVE--QQFLGEATCTLSQIVTRKNRSLTLDLV 165 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~--~d~LG~~~~~L~el~~~~~~~~~~~L~ 165 (561)
|.. ++ +++||++.++|.++.... ...|++|+
T Consensus 97 d~~-----------~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 97 ARV-----------REEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ------------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred CcC-----------cCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 965 44 999999999999987654 67899883
No 27
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.65 E-value=2.5e-16 Score=142.41 Aligned_cols=112 Identities=20% Similarity=0.301 Sum_probs=94.3
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceee-ee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQ 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~-~~ 262 (561)
...|+|.+++.+.+....+.+.+++|++|+.+|.+|.+|||++++.... +.+...+||+++++++||+|++ |.+. +.
T Consensus 13 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 13 TTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPG-ASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp -CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESC-CSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcC-CCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 5579999999998888888999999999999999999999999999752 3345689999999999999998 5544 21
Q ss_pred ecCCC-CccEEEEEEeccCCCCCceeEEEEEehhhHh
Q 008558 263 QVGSK-DSPLIIECFNFNSNGKHDLIGKVQKSLADLE 298 (561)
Q Consensus 263 ~l~d~-~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~ 298 (561)
. .+. ...|.|+|||++..+++++||++.+++.++.
T Consensus 92 ~-~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~ 127 (142)
T 2chd_A 92 E-EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLK 127 (142)
T ss_dssp H-HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCC
T ss_pred H-HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcC
Confidence 1 111 3689999999999999999999999999995
No 28
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=1e-15 Score=139.60 Aligned_cols=107 Identities=20% Similarity=0.243 Sum_probs=91.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeC-ceeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe-~~q~L~~~VyD~D~ 124 (561)
.++.++ ++|++|+.+|..+++||||+|++.+ ++.+....||+++++++||.|+|+|.|.+..+ ..+.|+|+|||+|.
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEES-CTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEEC-CCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 567777 5999999999999999999999986 33345689999999999999999999887653 34689999999996
Q ss_pred CcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
. +++++||++.++|.++... ....|++|.+
T Consensus 110 ~-----------~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 T-----------SRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp S-----------SCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred C-----------CCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 5 6899999999999999876 3668999965
No 29
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.65 E-value=5.5e-16 Score=141.27 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=91.9
Q ss_pred cEEEEE-EEEcCCCCCC-CCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRD-VLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D-~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+| ..+++||||++++.+ ++.+....||+++++|+||.|+++|.|.+..+. ...|+|+|||+
T Consensus 23 ~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 23 QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP-DKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEET-CCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEc-CCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 556666 6899999999 689999999999986 333456899999999999999999998876653 34899999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.++........|++|..
T Consensus 102 d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 102 GRF-----------GRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp CGG-----------GCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred CCC-----------cCCcEEEEEEEEcccccccCCccceEECcC
Confidence 864 789999999999999987766778999976
No 30
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.65 E-value=8.2e-16 Score=138.98 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=91.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEE-EeeCc--eeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~-~~fe~--~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+|..+++||||+|++.+ +..+....||+++++++||+|+++|.|. +..+. ...|+|+|||+
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLP-GASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEES-CCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEc-CCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 556776 6999999999999999999999986 3334568999999999999999999887 44333 35899999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.++........|++|..
T Consensus 108 d~~-----------~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 108 DKF-----------GHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp CTT-----------SCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCC-----------CCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 965 689999999999999988777788888854
No 31
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=3.5e-16 Score=142.73 Aligned_cols=124 Identities=17% Similarity=0.321 Sum_probs=99.6
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++++. ...+.+.+++|++|+.+|.++++|||+++++..+ +.....+||+++++++||+|+| |.+.+..
T Consensus 17 ~~~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 17 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPD-PKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp CTTCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESC-TTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CcceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECC-CCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 4579999999873 4557777899999999999999999999998763 3345689999999999999998 7766532
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
.+....|.|+|||++..+++++||++.+++.+|.. .....|++|.+++
T Consensus 94 -~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~-~~~~~W~~L~~~~ 141 (149)
T 1a25_A 94 -SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK-AGVDGWFKLLSQE 141 (149)
T ss_dssp -GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTT-CCEEEEEECBCHH
T ss_pred -ccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCc-CccCCeEEccCCC
Confidence 12246899999999999999999999999999963 2334577776543
No 32
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.64 E-value=1.2e-15 Score=136.63 Aligned_cols=107 Identities=20% Similarity=0.289 Sum_probs=90.9
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeC-ceeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe-~~q~L~~~VyD~D~ 124 (561)
..+.++ ++|++|+.+|..+++||||++++.+ ++......||+++++++||.|++.|.|.+... ..+.|+|+|||+|.
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIP-DPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEC-CTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEc-CCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 557776 5999999999999999999999975 23334689999999999999999999887653 34589999999986
Q ss_pred CcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
. +++++||++.++|.++.... ...|++|.+
T Consensus 95 ~-----------~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 95 T-----------TRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp S-----------SCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred C-----------CCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 5 68999999999999998765 678999965
No 33
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.64 E-value=6.1e-16 Score=139.97 Aligned_cols=107 Identities=22% Similarity=0.300 Sum_probs=91.0
Q ss_pred ccEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEc
Q 008558 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDV 122 (561)
Q Consensus 46 ~~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~ 122 (561)
...+.++ ++|++|+.+|..+++||||+|++.+... ...||+++++++||.|+++|.|.+..+. ...|+|+|||+
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 109 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 109 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS---CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC---ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeC
Confidence 3556665 6999999999999999999999976332 4889999999999999999988766543 36999999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.++........|++|..
T Consensus 110 d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 110 DRF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CSS-----------SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCC-----------CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 965 689999999999999988777788999964
No 34
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=5.6e-16 Score=141.94 Aligned_cols=124 Identities=16% Similarity=0.301 Sum_probs=99.8
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++.+......+.+.+++|++|+.+|.++.+|||++++...+. ...+||+++++++||+|++ |.|.+..
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~ 102 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRKTLNPVFNEQFTFKVPY 102 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTC---CSCEECCCCTTCSSCEEEEEEEECCCH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCC---CceEeccccCCCCCCcCcccEEEeecH
Confidence 45799999999988888889999999999999999999999999997532 2478999999999999998 6554421
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
-.-....|.|+|||++..+++++||++.+++.++........|++|.+
T Consensus 103 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 103 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 100257899999999999999999999999999953222235666654
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=1.3e-15 Score=137.27 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=98.1
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++.+......+.+.+++|+ ++|.+|.+|||+++++..+++ ...+||+++++++||+|+| |.|.+..
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~ 84 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAE 84 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecH
Confidence 457999999999888888899999999 468899999999999975322 4578999999999999998 6665421
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
-.-....|.|+|||+|..+++++||++.++|.++........|++|..+.
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 11125689999999999999999999999999995323334566766543
No 36
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.64 E-value=4.4e-16 Score=140.92 Aligned_cols=121 Identities=17% Similarity=0.360 Sum_probs=98.9
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeee-
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ- 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~- 262 (561)
...|+|.+++++......+.+.+++|++|+.+|.++.+|||+++++..++ ...+||+++++++||+|++ |.+.+.
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~ 94 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRKTLNPVFNEQFTFKVPY 94 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCC---SCCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCC---CccEECccCcCCCCCcCcCeEEEeecH
Confidence 45799999999988888899999999999999999999999999996532 2478999999999999998 555432
Q ss_pred -ecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeee
Q 008558 263 -QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLF 310 (561)
Q Consensus 263 -~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~ 310 (561)
.+. ...|.|+|||++..+++++||++.++|.++........|++|.
T Consensus 95 ~~l~--~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 95 SELG--GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp HHHT--TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred hhcC--CCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 222 4789999999999999999999999999996322233455553
No 37
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.64 E-value=1.2e-15 Score=142.60 Aligned_cols=107 Identities=19% Similarity=0.258 Sum_probs=91.3
Q ss_pred cEEEEE-EEEcCCCCCCC-CCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEE-Ecc
Q 008558 47 SQIELS-FSAADLRDRDV-LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIY-DVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~-~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~Vy-D~D 123 (561)
..+.++ ++|++|+.+|. .+++||||+|++.+ .+.+....||+++++|+||+|+|+|.|.+..+ .+.|+|+|| |+|
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDESPQ-GKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSCCT-TEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEecCC-CCEEEEEEEEcCC
Confidence 567776 69999999996 79999999999986 45566799999999999999999998877544 479999999 998
Q ss_pred CCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
.. +++++||++.++|.++........|++|..
T Consensus 108 ~~-----------~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~ 139 (171)
T 2q3x_A 108 RM-----------DHKCFMGVAQILLEELDLSSMVIGWYKLFP 139 (171)
T ss_dssp TT-----------CSSEEEEEEEECGGGSCTTSCEEEEEECBC
T ss_pred CC-----------CCCCEEEEEEEEHHHcccCCCcceeEECCC
Confidence 65 689999999999999986667778999976
No 38
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.64 E-value=2.5e-16 Score=146.46 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=100.0
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
..+|+|.+++.+.+....+.+.+++|++|+.+|.+|++|||+++++..+ +.....+||+++++++||+|++ |.|.+..
T Consensus 21 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 21 EERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD-MGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECC-CCccceEeCCcccCCCCCcccceEEEEcch
Confidence 4579999999999888889999999999999999999999999999763 2335689999999999999998 6655421
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
-.-....|.|+|||++..+++++||++.+++.++. .....|+++++
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~ 145 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLK 145 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHH
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHh
Confidence 11014689999999999999999999999999873 23334566654
No 39
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.4e-15 Score=139.32 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=90.1
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||+|++.+... ...||+++++++||+|+|.|.|.+..+. ...|+|+|||+|
T Consensus 42 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 456665 6999999999999999999999976322 5789999999999999999998766542 469999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
.. +++++||++.++|.++........|++|.+
T Consensus 119 ~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 119 RF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SS-----------SCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CC-----------CCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 65 689999999999999977666778999965
No 40
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=137.51 Aligned_cols=106 Identities=23% Similarity=0.385 Sum_probs=89.5
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEE-eeC--ceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~-~fe--~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+|..+++||||+|++.++.. ...||+++++++||+|+|.|.|.. ..+ ....|+|+|||+
T Consensus 26 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 26 STLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK---HKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp CCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS---SEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC---ccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 556776 6999999999999999999999975322 478999999999999999998863 222 246899999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.++........|++|..
T Consensus 103 d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 103 DRF-----------SRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp CSS-----------SSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred CCC-----------CCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 965 689999999999999988777788999976
No 41
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=1e-15 Score=143.14 Aligned_cols=123 Identities=15% Similarity=0.239 Sum_probs=98.2
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCC-CCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDL-FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~-~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~ 262 (561)
...|+|.+.+++ ....+.+.+++|++|+.+|. +|.+|||+++++.. ++.+...+||+++++++||+||| |.|.+.
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 447999999988 45667778999999999995 79999999999876 35556789999999999999998 666542
Q ss_pred ecCCCCccEEEEEE-eccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 263 QVGSKDSPLIIECF-NFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 263 ~l~d~~~~L~ieV~-D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
.....|.|+|| |++..+++++||++.++|.++........|++|....
T Consensus 93 ---~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 93 ---PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp ---CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred ---CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 23578999999 9999999999999999999996323334567776543
No 42
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.63 E-value=9.4e-16 Score=140.63 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=99.3
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|++.+++.+......+.+.+++|++|+.+| +|.+|||+++++..+ +.....+||+++++++||+|++ |.+.+..
T Consensus 11 ~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 11 KVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPE-DSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp --CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESC-SCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcC-CCCccEEeccccCCCCCCccccEEEEeccc
Confidence 457899999999888899999999999999999 699999999998753 3234679999999999999998 6665421
Q ss_pred cCCCCccEEEEEEeccCCCC-CceeEEEEEehhhHhh-ccCCCceeeeeccc
Q 008558 264 VGSKDSPLIIECFNFNSNGK-HDLIGKVQKSLADLEK-LHSSGQGQNLFLST 313 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~-~d~IG~~~i~l~~l~~-~~~~~~~~~l~n~~ 313 (561)
.+....|.|+|||++..++ +++||++.+++.+|.. ......|++|....
T Consensus 89 -~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 89 -EDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp -GGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred -HHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 2234569999999999876 8999999999999963 12333566666543
No 43
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.63 E-value=2e-15 Score=141.79 Aligned_cols=121 Identities=16% Similarity=0.330 Sum_probs=86.7
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
+.+.+.+++|++|+.+|.+|++|||+++++....+++...++|+++++++||.|++ |.|.+. .....|.|+|||++
T Consensus 8 g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~---~~~~~L~~~V~d~d 84 (176)
T 3m7f_B 8 RVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL---PQRHRILFEVFDEN 84 (176)
T ss_dssp EEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC---TTTCEEEEEEEECC
T ss_pred EEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc---CCCCEEEEEEEECC
Confidence 34556688999999999999999999999976545556789999999999999998 666553 33578999999999
Q ss_pred CCCCCceeEEEEEehhhHhhccCCC-------ceeeeecccccCCCCcccccccEEEe
Q 008558 280 SNGKHDLIGKVQKSLADLEKLHSSG-------QGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~~~~~~-------~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
..+++++||++.++|.++.. .... .+++|.....+++ ..|.|+|.
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~~~~w~~L~~~~~~~~-----~~G~l~l~ 136 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPT-ENPRMERPYTFKDFVLHPRSHKSR-----VKGYLRLK 136 (176)
T ss_dssp ----CEEEEEEEEESCSCCB-C------CCCCEEEECBCSSTTCC-----CCSEEEEE
T ss_pred CCCCCcEEEEEEEEHHHccc-cCCcccccccccEEEccccCCCCc-----cCEEEEEE
Confidence 99999999999999999963 2222 3556544332222 27999984
No 44
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.62 E-value=3.8e-16 Score=140.08 Aligned_cols=122 Identities=16% Similarity=0.244 Sum_probs=99.0
Q ss_pred cceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecC
Q 008558 187 CGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVG 265 (561)
Q Consensus 187 ~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~ 265 (561)
+|+|.+++.+.+....+.+.+++|++|+.+|.+|.+|||++++...+ +.....++|+++++++||.|+| |.+.+..-.
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYK-DKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEET-TEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeC-CCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 59999999998888889999999999999999999999999999763 3446789999999999999998 555432111
Q ss_pred CCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 266 SKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 266 d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
-....|.|+|||++..+++++||++.+++.++. .+...|++++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~ 124 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMIA 124 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHHH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHHh
Confidence 013679999999999999999999999999763 23344566654
No 45
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=138.30 Aligned_cols=125 Identities=17% Similarity=0.305 Sum_probs=97.6
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcC-CC------CCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCK-DL------FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS- 256 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~-d~------~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e- 256 (561)
...|+|.+++.+.+....+.+.+++|++|+.+ |. +|.+|||+++++..+.. ..+||+++++++||+|+|
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBC
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeee
Confidence 56899999999998888899999999999984 43 46899999999975322 478999999999999998
Q ss_pred ceeeeeecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 257 VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 257 f~~~~~~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
|.|.+..-.-....|.|+|||++..+++++||++.++|.++.. .....+|..+.++
T Consensus 87 f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~-~~~~~~w~~L~~~ 142 (147)
T 2enp_A 87 YTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDL-VKGGHWWKALIPS 142 (147)
T ss_dssp CEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCT-TTCCCEEECCBCC
T ss_pred EEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCC-CCCccEEEEeecC
Confidence 6655421100135899999999999999999999999999963 2333455554443
No 46
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=3.4e-16 Score=141.45 Aligned_cols=109 Identities=29% Similarity=0.393 Sum_probs=90.0
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCce--------eeEeeeeeecCCCCCceeeeEEEE-EeeC--ceeE
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGAL--------VEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQT 114 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~--------~~~~rTevi~n~lNP~w~e~f~i~-~~fe--~~q~ 114 (561)
..+.++ ++|++|+.+|..+++||||+|++.+..+.+ ....||+++++|+||+|++.|.|. +..+ ....
T Consensus 18 ~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~ 97 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKT 97 (142)
T ss_dssp TEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCE
Confidence 345565 699999999999999999999997643321 246899999999999999999886 5443 3469
Q ss_pred EEEEEEEccCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 115 LVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 115 L~~~VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|+|+|||+|.. +++++||++.++|.++........|++|..
T Consensus 98 l~i~V~d~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 98 LEVTVWDYDRF-----------SSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEECSS-----------SCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEECCCC-----------CCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 99999999965 689999999999999977666778999976
No 47
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=2.9e-15 Score=134.71 Aligned_cols=106 Identities=18% Similarity=0.258 Sum_probs=88.0
Q ss_pred cEEEEE-EEEcCCCCCCCC-CCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEE-EeeCc--eeEEEEEEEE
Q 008558 47 SQIELS-FSAADLRDRDVL-SKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYD 121 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~-sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~-~~fe~--~q~L~~~VyD 121 (561)
..+.++ ++|++|+.+|.. +++||||++++.++.. ...||+++++++||+|+|+|.|. +..+. ...|+|+|||
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK---HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC---SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC---ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 556676 699999999986 9999999999986322 58999999999999999999885 55443 3599999999
Q ss_pred ccCCcccccccccccccceeeeeeEeechhhhccCCe-eEEEEccc
Q 008558 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR-SLTLDLVR 166 (561)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~-~~~~~L~~ 166 (561)
+|.. +++++||++.++|.++....+. ..|++|..
T Consensus 99 ~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 99 FDRF-----------SRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp ECSS-----------CCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred CCCC-----------CCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 9965 6899999999999999876544 46788865
No 48
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.61 E-value=2.1e-15 Score=138.14 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=94.0
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++++.+....+.+.+++|++|+.+|.+|++|||+++++.. ++.....+||+++++++||+|+| |.|.+..
T Consensus 14 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 14 SGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp --CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred ccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 457999999999988888999999999999999999999999999976 34555689999999999999998 6655432
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
-.-....|.|+|||++..+++++||++.+++.+. ..+...|+++++
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 1112468999999999999999999999999884 223334566554
No 49
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=2.3e-15 Score=135.60 Aligned_cols=116 Identities=19% Similarity=0.263 Sum_probs=88.6
Q ss_pred ccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeec-CCCCccEEEEEEecc
Q 008558 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV-GSKDSPLIIECFNFN 279 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l-~d~~~~L~ieV~D~d 279 (561)
.+.+.+++|++|+.+|. |++|||++++... ..+||+++++++||+|+| |.|.+... .+....|.|+|||++
T Consensus 8 ~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKF-GKPDPIVSVIFKD------EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp EEEEEEEEEESCCCCSS-SCCCEEEEEECSS------CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred EEEEEEEEeeCCCCCCC-CCCCeEEEEEECC------EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 45566789999999999 9999999999854 368999999999999998 66665322 124688999999999
Q ss_pred CCCCCceeEEEEEehhhHhhccCCCceee---eecccccCCCCcccccccEEEe
Q 008558 280 SNGKHDLIGKVQKSLADLEKLHSSGQGQN---LFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~~~~~~~~~~---l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
..+++++||++.+++.+|........+++ +.++.+ + + ..|+|+|.
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~--~---~-~~G~l~l~ 128 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKG--Q---D-TGATIDLV 128 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTC--C---E-EEEEEEEE
T ss_pred CCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCC--C---C-CCCEEEEE
Confidence 99999999999999999963322234555 444321 1 1 27888884
No 50
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=1.1e-15 Score=137.72 Aligned_cols=107 Identities=22% Similarity=0.329 Sum_probs=89.1
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEE-EeeC--ceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~-~~fe--~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+|..+++||||+|++.+ ++.+....||+++++|+||+|+|+|.|. ...+ ..+.|+|+|||+
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 456676 7999999999999999999999865 2233478999999999999999999887 4433 236999999999
Q ss_pred cCCccccccccccccc--ceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVE--QQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~--~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. ++ +++||++.++|.++.... ...|++|..
T Consensus 100 d~~-----------~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 100 ARV-----------REEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp CSS-----------SSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred CCC-----------cCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 975 44 899999999999987654 678999976
No 51
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=137.84 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=88.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+ +||||+|++.+ ++.+....||+++++|+||+|+|+|.|.+..+. ...|+|+|||+|
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLP-DKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEES-CCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEc-CCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 567776 6999999999999 99999999986 333446889999999999999999998865543 349999999998
Q ss_pred CCcccccccccccc--cceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 124 TQFHNVDVKTLKLV--EQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 124 ~~~~~~~~~~~~l~--~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
.. + ++++||++.++|.++........|++|..
T Consensus 102 ~~-----------~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 102 GF-----------LSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp CS-----------SCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred Cc-----------cccCCcEEEEEEEecccccccccccceeeccC
Confidence 64 3 35799999999999876666677999965
No 52
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.61 E-value=3.4e-15 Score=136.88 Aligned_cols=107 Identities=15% Similarity=0.223 Sum_probs=87.6
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc-eeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV-VQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~-~q~L~~~VyD~D~ 124 (561)
..+.++ ++|++|+.+| .+++||||+|++.+. .......||+++++|+||.|+++|.|.+..+. .+.|+|+|||+|.
T Consensus 27 ~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 104 (153)
T 3fbk_A 27 RVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPE-DSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS 104 (153)
T ss_dssp SEEEEEEEEEESCCCCS-SSCCCEEEEEEEESC-SCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcC-CCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC
Confidence 556666 6999999999 699999999999762 22346899999999999999999998874432 2579999999996
Q ss_pred Cccccccccccccc-ceeeeeeEeechhhhc-cCCeeEEEEccc
Q 008558 125 QFHNVDVKTLKLVE-QQFLGEATCTLSQIVT-RKNRSLTLDLVR 166 (561)
Q Consensus 125 ~~~~~~~~~~~l~~-~d~LG~~~~~L~el~~-~~~~~~~~~L~~ 166 (561)
. ++ ++|||++.++|.+|.. ......|++|.+
T Consensus 105 ~-----------~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 105 Q-----------SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp S-----------GGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred C-----------CCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 4 45 8999999999999985 556678999976
No 53
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.60 E-value=6.5e-15 Score=135.78 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=88.9
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||+|++.+ ++.+....||+++++++||.|+++|.|.+..+. ...|+|+|||+|
T Consensus 25 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEe-CCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 567776 6999999999999999999999976 344567899999999999999999999876654 358999999999
Q ss_pred CCcccccccccccccceeeeeeEeechh----------hhccC--CeeEEEEccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQ----------IVTRK--NRSLTLDLVR 166 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~e----------l~~~~--~~~~~~~L~~ 166 (561)
.. +++++||++.+++.. +...+ ....|++|..
T Consensus 104 ~~-----------~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 104 KI-----------GKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp SS-----------SCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CC-----------CCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 65 689999999999984 44332 3457999865
No 54
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.60 E-value=6.6e-15 Score=131.95 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=80.9
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.+. ++|++|+.+|..+++||||++++.+ .+......||+++++++||.|+|.|.|.+..+. ...|+|+|||+|
T Consensus 16 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 16 NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMY-KDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEE-TTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEe-CCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 556776 6999999999999999999999986 344567899999999999999999998876654 368999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhh
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQI 152 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el 152 (561)
.. +++++||++.++|.++
T Consensus 95 ~~-----------~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 95 KL-----------SRNDVIGKIYLSWKSG 112 (138)
T ss_dssp SS-----------SCCEEEEEEEESSSSC
T ss_pred CC-----------CCCcEEEEEEEccccC
Confidence 65 6899999999999864
No 55
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.60 E-value=3.2e-15 Score=137.85 Aligned_cols=111 Identities=20% Similarity=0.327 Sum_probs=94.0
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
...|+|.+++.+.+....+.+.+++|+||+.+|.+|.+|||+++++..+ +.....+||+++++++||+|++ |.|.+..
T Consensus 9 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 9 EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQN-GKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEET-TEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeC-CceeceeeCceecCCCCCcccceEEEEcCH
Confidence 4579999999998888889999999999999999999999999998763 4456789999999999999998 6555421
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhh
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLAD 296 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~ 296 (561)
-.-....|.|+|||++..+++++||++.+++..
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 100135799999999999999999999999984
No 56
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.60 E-value=5.2e-16 Score=140.20 Aligned_cols=123 Identities=17% Similarity=0.275 Sum_probs=98.5
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCce--------eeEEEceeecCCCCCceec
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTH--------IPVCKTEVLKNETKPTWKS 256 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~--------~~~~kTevik~tlnP~W~e 256 (561)
..+|+|.+++.+. .+.+.+.+++|++|+.+|.+|++|||++++...+.+.. ...+||+++++++||+||+
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 4579999999876 56788889999999999999999999999997643321 2358999999999999998
Q ss_pred -ceee---eeecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 257 -VFLN---IQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 257 -f~~~---~~~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
|.+. .+.+ ....|.|+|||++..+++++||++.+++.++........|++|..
T Consensus 82 ~f~f~~v~~~~l--~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 82 TVIYKSISMEQL--MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEECSCCHHHH--TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEECCcCHHHc--cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 5553 2222 256899999999999999999999999999864444456777754
No 57
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.60 E-value=5.1e-15 Score=134.66 Aligned_cols=114 Identities=12% Similarity=0.245 Sum_probs=89.7
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
+.+.+.+++|++|+.+|.+|++|||++++... ..++|+++++++||.|++ |.+... .....|.|+|||++
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~---~~~~~l~~~v~d~d 87 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECH---NSSDRIKVRVLDED 87 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCSCSSCEEEEEEEEEEC---STTCEEEEEEEECC
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCCCCCCCcccEEEEEec---CCCCEEEEEEEECC
Confidence 44566788999999999999999999999832 478999999999999998 666553 23578999999999
Q ss_pred CC-----------CCCceeEEEEEehhhHhhccCCCceeeeecccccCCCCcccccccEEEe
Q 008558 280 SN-----------GKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 280 ~~-----------g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
.. +++++||++.+++.++. .....|++|.......+ . .|.|+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~----~-~G~i~l~ 142 (148)
T 3kwu_A 88 DDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSA----V-SGAIRLH 142 (148)
T ss_dssp CSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCC----C-CCEEEEE
T ss_pred CCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCC----C-ceEEEEE
Confidence 86 88999999999999993 33345777764332111 2 7999984
No 58
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=3.3e-15 Score=134.58 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=86.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|+ ++|..+++||||+|++.+.++ ....||+++++|+||+|+|+|.|.+..+. ...|+|+|||+|
T Consensus 26 ~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 26 AELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 556666 5788 578899999999999975322 35789999999999999999999876654 358999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
.. +++++||++.++|.++........|++|..
T Consensus 101 ~~-----------~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 101 RF-----------SRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp SS-----------CTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CC-----------CCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 65 789999999999999975556678999965
No 59
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=2.7e-15 Score=136.46 Aligned_cols=106 Identities=16% Similarity=0.257 Sum_probs=87.3
Q ss_pred cEEEEE-EEEcCCCCC-CC------CCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEE
Q 008558 47 SQIELS-FSAADLRDR-DV------LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLV 116 (561)
Q Consensus 47 ~~vel~-isa~~L~~~-D~------~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~ 116 (561)
..+.++ ++|++|+.+ |. .+++||||+|++.++.. ...||+++++++||+|+|+|.|.+..+. ...|+
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 567776 699999984 43 46899999999986332 4789999999999999999998766543 34899
Q ss_pred EEEEEccCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 117 FRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 117 ~~VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|+|||+|.. +++++||++.++|.++........|++|..
T Consensus 103 ~~V~d~d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKF-----------SRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTT-----------CCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCC-----------cCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 999999965 688999999999999987666678999865
No 60
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.59 E-value=7.5e-15 Score=134.39 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=74.5
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||+|++.+ ++.+....||+++++++||+|+|+|.|.+..+. ...|+|+|||+|
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 556666 6999999999999999999999976 444556889999999999999999999876654 368999999999
Q ss_pred CCcccccccccccccceeeeeeEeechh
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQ 151 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~e 151 (561)
.. +++++||++.++|.+
T Consensus 109 ~~-----------~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RG-----------SRNEVIGRLVLGATA 125 (153)
T ss_dssp TT-----------SCCEEEEEEEESTTC
T ss_pred CC-----------CCCcEEEEEEECCCC
Confidence 65 689999999999987
No 61
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.58 E-value=1.1e-14 Score=129.81 Aligned_cols=117 Identities=21% Similarity=0.302 Sum_probs=87.9
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEeccCC
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSN 281 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~~ 281 (561)
+.+.+++|++|+++|.+|++|||++++...+ ...++|+++++++||+|++ |.+.... ...|.|+|||++..
T Consensus 7 L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~----~~~~kT~v~~~t~nP~wne~f~f~v~~----~~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 7 IRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS----GQCHSTDTVKNTLDPKWNQHYDLYVGK----TDSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEESCCCCSTTCCCCEEEEEEETTT----CCEEECCCCSSCSSCEEEEEEEEEEET----TCCEEEEEEEGGGT
T ss_pred EEEEEEEeECCCCCCCCCCcCeEEEEEECCC----CceEECCccCCCCCCCccCEEEEEeCC----CCEEEEEEEECCCC
Confidence 4567899999999999999999999998432 2579999999999999998 6665532 23599999999988
Q ss_pred CC---CceeEEEEEehhhHhhccC-CCceeeeecccccCCCCcccccccEEEe
Q 008558 282 GK---HDLIGKVQKSLADLEKLHS-SGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 282 g~---~d~IG~~~i~l~~l~~~~~-~~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
++ +++||++.+++.+|..... ...+++|...... +..+. .|+|+|.
T Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~--~~~~~-~G~i~v~ 128 (132)
T 3pyc_A 79 HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPS--DTDAV-RGQIVVS 128 (132)
T ss_dssp TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTT--CCCCC-CSEEEEE
T ss_pred CCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCC--CCCce-eEEEEEE
Confidence 76 7999999999999843332 2345555442211 11122 8999985
No 62
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.57 E-value=6.5e-15 Score=132.05 Aligned_cols=118 Identities=13% Similarity=0.196 Sum_probs=89.9
Q ss_pred ceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceee-ee--e
Q 008558 188 GKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQ--Q 263 (561)
Q Consensus 188 G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~-~~--~ 263 (561)
+.+.+.... ....+.+.+++|++|+. +.+|.+|||+++++.. ++.....+||+++++++||+|+| |.+. +. .
T Consensus 9 ~~~~~~~~~--~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~ 84 (134)
T 2b3r_A 9 GAVKLSVSY--RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKET 84 (134)
T ss_dssp CEEEEEEEE--ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred EEEEEEEee--cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHH
Confidence 334444333 45667888999999997 8889999999999875 33345689999999999999998 6555 32 2
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
+ ....|.|+|||++..+++++||++.++|.++........|++|..
T Consensus 85 l--~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 85 L--RQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp H--TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred h--CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 2 257899999999999999999999999999963233335666643
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.56 E-value=2.1e-14 Score=133.31 Aligned_cols=94 Identities=16% Similarity=0.280 Sum_probs=79.2
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCc--eeEEEEEEEEcc
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~--~q~L~~~VyD~D 123 (561)
..+.++ ++|++|+.+|..+++||||+|++.+. .......||+++++++||+|+++|.|.+..+. ...|+|+|||+|
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD-MGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECC-CCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 456665 69999999999999999999999862 22346899999999999999999998876543 459999999999
Q ss_pred CCcccccccccccccceeeeeeEeechhh
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQI 152 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el 152 (561)
.. +++++||++.++|.++
T Consensus 116 ~~-----------~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 116 IG-----------KSNDYIGGCQLGISAK 133 (166)
T ss_dssp SS-----------SCCEEEEEEEEETTCC
T ss_pred CC-----------CCCcEEEeEEEecccC
Confidence 65 6899999999999874
No 64
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=5.9e-14 Score=141.48 Aligned_cols=138 Identities=14% Similarity=0.273 Sum_probs=106.4
Q ss_pred ccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeec
Q 008558 186 HCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV 264 (561)
Q Consensus 186 ~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l 264 (561)
..|+|.+++.+......+.+.+++|++|+.+|..|++|||++++...+.+ ..++|+++++++||.|+| |.+.+..-
T Consensus 4 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~ 80 (284)
T 2r83_A 4 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYS 80 (284)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGG
T ss_pred ceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechH
Confidence 47999999999888888888999999999999999999999999875322 368999999999999998 66554211
Q ss_pred CCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeecccccCCCCcccccccEEEe
Q 008558 265 GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 265 ~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
.-....|.|+|||++..+++++||++.++|.++........|++|..+.+... .. .|.|.+.
T Consensus 81 ~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~---~~-~G~i~l~ 142 (284)
T 2r83_A 81 ELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQ---EK-LGDICFS 142 (284)
T ss_dssp GCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCC---CC-CCEEEEE
T ss_pred HhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccc---cc-cccEEEE
Confidence 11247899999999999999999999999999953222234666665432111 11 7888774
No 65
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.55 E-value=1.3e-14 Score=130.03 Aligned_cols=113 Identities=15% Similarity=0.290 Sum_probs=88.9
Q ss_pred ccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeec-CCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
.+.+.+++|++|+.+|.+|++|||++++... ..+||++++ +++||+|+| |.+.+.. ....|.|+|||++
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d~~ 81 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT------QDQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFDKD 81 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSS------CEEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECCSS
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECC------ccceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEECC
Confidence 3455678999999999999999999998854 257999999 899999997 7777652 4678999999999
Q ss_pred CCCCCceeEEEEEehhhHhhc-cCCCceeeeecccccCCCCcccccccEEEeE
Q 008558 280 SNGKHDLIGKVQKSLADLEKL-HSSGQGQNLFLSTAAGNNNHKILNSQLFVDK 331 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~~-~~~~~~~~l~n~~~~~K~~~~~~~G~i~l~~ 331 (561)
..+++++||++.+++.++... .....+++|. +. ++ . .|+|+|.-
T Consensus 82 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~--~~----~-~G~i~l~l 126 (136)
T 1wfj_A 82 VGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KD--EE----Y-KGEIWVAL 126 (136)
T ss_dssp SCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ET--TE----E-EEEEEEEE
T ss_pred CCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cC--Cc----c-CEEEEEEE
Confidence 999999999999999999422 1223567776 21 11 2 89999843
No 66
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.54 E-value=4.8e-14 Score=143.32 Aligned_cols=136 Identities=19% Similarity=0.311 Sum_probs=104.0
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeee-
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ- 262 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~- 262 (561)
+..|+|.+++++......+.+.+++|++|+.+|.+|.+|||+++++..+ + ...+||+++++++||+|++ |.+.+.
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~-~--~~~~kT~v~~~t~nP~wne~f~f~v~~ 80 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-R--KKKFQTKVHRKTLNPIFNETFQFSVPL 80 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS-T--TSCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC-C--CeeEeCCccCCCCCCcEeeEEEEEecH
Confidence 4579999999998888889999999999999999999999999998542 2 2478999999999999998 555442
Q ss_pred -ecCCCCccEEEEEEeccCCCCCceeEEEEEe-hhhHhhcc-CCCceeeeecccccCCCCcccccccEEEe
Q 008558 263 -QVGSKDSPLIIECFNFNSNGKHDLIGKVQKS-LADLEKLH-SSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (561)
Q Consensus 263 -~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~-l~~l~~~~-~~~~~~~l~n~~~~~K~~~~~~~G~i~l~ 330 (561)
.+. ...|.|+|||+|..+++++||++.++ +.++.... ....+++|...... ... .|.|.+.
T Consensus 81 ~~l~--~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~----~~~-~G~i~vs 144 (296)
T 1dqv_A 81 AELA--QRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSE----KAD-LGELNFS 144 (296)
T ss_dssp GGGS--SCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSC----CSC-CCEEEEE
T ss_pred HHhc--CCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccccccc----ccc-cceEEEE
Confidence 221 46899999999999999999999995 55554322 22345565443221 112 7998874
No 67
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=131.80 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=75.2
Q ss_pred cccceeEeeecCCCcCCCC----------CCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCc
Q 008558 201 KTTTELILRCSDLDCKDLF----------SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDS 269 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~----------g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~ 269 (561)
+.+.+.+++|++|+++|.. |.+|||+++.+.. ..+.||+++++|+||.||| |.+.+.. ..
T Consensus 29 g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-----~~~~kT~v~~ktlnP~WNE~F~f~v~~----~~ 99 (157)
T 2fk9_A 29 GYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-----VRVGQTSTKQKTNKPTYNEEFCANVTD----GG 99 (157)
T ss_dssp EEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEEE----EC
T ss_pred cEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-----EeeEEeeecCCCCCCccCcEEEEEcCC----CC
Confidence 4456668899999999832 5799999998843 3468999999999999998 7766542 35
Q ss_pred cEEEEEEeccCCCCCceeEEEEEehhhHhh
Q 008558 270 PLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (561)
Q Consensus 270 ~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~ 299 (561)
.|.|+|||++..+++++||++.+++.+|..
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~ 129 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLR 129 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHH
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhc
Confidence 899999999999999999999999999974
No 68
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.52 E-value=6.3e-14 Score=131.32 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=85.9
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
..+.+.+++|++|+.++.++++|||+++++.. ..+||+++++++||+|+| |.|.+. ....|.|+|||++
T Consensus 36 ~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~------~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D~d 105 (173)
T 2nq3_A 36 SQLQITVISAKLKENKKNWFGPSPYVEVTVDG------QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWSHQ 105 (173)
T ss_dssp EEEEEEEEEEEECCCC--CCCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEECC
T ss_pred eEEEEEEEEeECCCCcccCCCCCeEEEEEECC------EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEECC
Confidence 44666789999999444445599999998832 589999999999999998 777652 3778999999999
Q ss_pred CCCCCceeEEEEEehhhHhhccCC-----CceeeeecccccCCCCcccccccEEEeE
Q 008558 280 SNGKHDLIGKVQKSLADLEKLHSS-----GQGQNLFLSTAAGNNNHKILNSQLFVDK 331 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~~~~~-----~~~~~l~n~~~~~K~~~~~~~G~i~l~~ 331 (561)
..+++++||++.+++.++...... ..+++|...+ ...+. .|.|.|.-
T Consensus 106 ~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~----~~~~~-~G~L~v~l 157 (173)
T 2nq3_A 106 TLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK----EPTET-IGDLSICL 157 (173)
T ss_dssp SSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS----CTTSE-EEEEEEEE
T ss_pred CCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC----CCCcc-cEEEEEEE
Confidence 999999999999999999643221 1245554431 11222 89988743
No 69
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.51 E-value=1.7e-14 Score=127.43 Aligned_cols=103 Identities=14% Similarity=0.223 Sum_probs=79.7
Q ss_pred ccceeEeeecCCCcC---CCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEe
Q 008558 202 TTTELILRCSDLDCK---DLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~---d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D 277 (561)
.+.+.+++|++|+.+ |.+|++|||++++..... ...+||+++++++||+|++ |.+.... .....|.|+|||
T Consensus 4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~~l~i~V~d 78 (126)
T 1rlw_A 4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNNDINPVWNETFEFILDP--NQENVLEITLMD 78 (126)
T ss_dssp EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTTCSSCEEEEEEEEEECT--TSCCEEEEEEEE
T ss_pred EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC---CceEEccccCCCCCCcccceEEEEecC--CCCCEEEEEEEE
Confidence 456678899999984 678999999999986421 2578999999999999997 7766532 235789999999
Q ss_pred ccCCCCCceeEEEEEehhhHhhccCCCceeeee
Q 008558 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLF 310 (561)
Q Consensus 278 ~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~ 310 (561)
++..+ +++||++.++|.+|........+++|.
T Consensus 79 ~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~ 110 (126)
T 1rlw_A 79 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 110 (126)
T ss_dssp CCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEET
T ss_pred CCCCC-CceeEEEEEEHHHccCCCcEEEEEEcC
Confidence 99875 899999999999995322222445553
No 70
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.51 E-value=3.2e-14 Score=127.65 Aligned_cols=89 Identities=13% Similarity=0.235 Sum_probs=74.8
Q ss_pred ccceeEeeecCCCcCCCCCC-----------CCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCc
Q 008558 202 TTTELILRCSDLDCKDLFSR-----------NDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDS 269 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~-----------sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~ 269 (561)
.+.+.+++|++|+++|.+++ +|||++++... ..+.+|+++++++||+||| |.+.+.. ..
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-----~~~~~T~~~~~t~nP~WnE~f~f~v~~----~~ 77 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-----SRIGQTATKQKTNSPAWHDEFVTDVCN----GR 77 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEEE----EC
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-----eEeeeeeEECCCcCCccCCEEEEEecC----CC
Confidence 34556789999999986655 99999998732 3568999999999999998 7776542 27
Q ss_pred cEEEEEEeccCCCCCceeEEEEEehhhHhh
Q 008558 270 PLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (561)
Q Consensus 270 ~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~ 299 (561)
.|.|+|||++..+++++||++.+++.++..
T Consensus 78 ~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 78 KIELAVFHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHTS
T ss_pred EEEEEEEeCCCCCCCCEEEEEEEEHHHhcc
Confidence 899999999999999999999999999963
No 71
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.50 E-value=7.6e-14 Score=152.28 Aligned_cols=114 Identities=20% Similarity=0.297 Sum_probs=95.5
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccCC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~~ 125 (561)
..+.++ ++|++|+++|..|+|||||+|++.+ ...||+++++|+||.|++.|.+.+.....+.|+|+|||+|..
T Consensus 387 ~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred ceEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 356665 6999999999999999999999943 588999999999999999999988777778999999999965
Q ss_pred cccccccccccccceeeeeeEeechhhhccCC----eeEEEEccccccccccccccCCCCCCCcccceEEeecc
Q 008558 126 FHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAE 195 (561)
Q Consensus 126 ~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~----~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e 195 (561)
++++|||++.++|.++..... ...|++|.. ...|+|.+.++
T Consensus 461 -----------~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------------------~~~G~i~l~~~ 505 (510)
T 3jzy_A 461 -----------SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------------------VPTGEVWVRFD 505 (510)
T ss_dssp -----------SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------------------SSSCEEEEEEE
T ss_pred -----------CCCCceEEEEEEHHHhccccCCCCceeeeecCCC------------------CCCceEEEEEE
Confidence 789999999999999976433 457888754 23588887654
No 72
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.46 E-value=2.3e-13 Score=148.55 Aligned_cols=96 Identities=25% Similarity=0.363 Sum_probs=79.9
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEe-eCceeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQ-FEVVQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~-fe~~q~L~~~VyD~D~ 124 (561)
..+.++ ++|++|+. |.+|+|||||+|++.. ...||+++++|+||+|++.|.|.+. ++..+.|+|+|||+|.
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~------~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG------QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEETT------EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEECC------EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 346665 69999999 9999999999999953 3599999999999999999998754 5677899999999997
Q ss_pred CcccccccccccccceeeeeeEeechhhhccCCeeEEEEc
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDL 164 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L 164 (561)
. +++||||++.++|.. .....|.+|
T Consensus 467 ~-----------~~dD~LG~~~~~L~~----g~~~~~~~l 491 (540)
T 3nsj_A 467 G-----------WDDDLLGSCDRSPHS----GFHEVTCEL 491 (540)
T ss_dssp S-----------SCCEEEEEEEECCCS----EEEEEEEEC
T ss_pred C-----------CCCCEEEEEEEEeeC----CcEEEEEEc
Confidence 5 689999999999872 123467766
No 73
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.33 E-value=4.2e-12 Score=138.49 Aligned_cols=91 Identities=14% Similarity=0.300 Sum_probs=78.3
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEecc
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d 279 (561)
+.+.+.+++|++|+.+|.+|++|||++++... ..++|+++++++||.|++ |.+..... ....|.|+|||+|
T Consensus 387 ~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~~--~~~~l~~~v~d~d 458 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKDL--YQDVLCLTLFDRD 458 (510)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESCT--TTCEEEEEEEECC
T ss_pred ceEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCCCCCCccCceEEEEecCC--CCCEEEEEEEeCC
Confidence 34566789999999999999999999999832 478999999999999998 66665422 3467999999999
Q ss_pred CCCCCceeEEEEEehhhHhh
Q 008558 280 SNGKHDLIGKVQKSLADLEK 299 (561)
Q Consensus 280 ~~g~~d~IG~~~i~l~~l~~ 299 (561)
..+++++||++.+++.++..
T Consensus 459 ~~~~~d~lG~~~~~l~~l~~ 478 (510)
T 3jzy_A 459 QFSPDDFLGRTEIPVAKIRT 478 (510)
T ss_dssp SSSSCCEEEEEEEEHHHHHH
T ss_pred CCCCCCceEEEEEEHHHhcc
Confidence 99999999999999999974
No 74
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.31 E-value=6.8e-12 Score=136.93 Aligned_cols=86 Identities=20% Similarity=0.264 Sum_probs=74.2
Q ss_pred ccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEEeccC
Q 008558 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 280 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~ 280 (561)
.+.+.+++|++|+. |.+|++|||+++++.+ ..+||+++++++||+|++ |.+....+ ....+|+|+|||+|.
T Consensus 395 ~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~------~~~kTkvik~tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 395 HLVVSNFRAEHLWG-DYTTATDAYLKVFFGG------QEFRTGVVWNNNNPRWTDKMDFENVLL-STGGPLRVQVWDADY 466 (540)
T ss_dssp EEEEEEEEEESCCC-SSCSCCCEEEEEEETT------EEEECCCBCSCSSCBCCCCEEEEEEET-TTCCCEEEEEEECCS
T ss_pred EEEEEEEEccCCCc-ccCCCcCeEEEEEECC------EeeeeeeecCCCCCCCCeEEEEEEecC-CCCCEEEEEEEECCC
Confidence 46778999999999 9999999999999843 249999999999999998 77765433 236789999999999
Q ss_pred CCCCceeEEEEEehh
Q 008558 281 NGKHDLIGKVQKSLA 295 (561)
Q Consensus 281 ~g~~d~IG~~~i~l~ 295 (561)
.++||+||++.++|.
T Consensus 467 ~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 467 GWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSCCEEEEEEEECCC
T ss_pred CCCCCEEEEEEEEee
Confidence 999999999999987
No 75
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.30 E-value=2.4e-12 Score=144.81 Aligned_cols=105 Identities=18% Similarity=0.329 Sum_probs=91.0
Q ss_pred cEEEEE-EEEcCCCC---CCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeCceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRD---RDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~---~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~ 122 (561)
..++++ ++|++|+. +|..+++||||+|++.+... ...||+++++++||+|+|+|.|.+.....+.|+|+|||+
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 567776 69999999 89999999999999975222 588999999999999999999998876677999999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. + +++||++.++|.+|........|++|..
T Consensus 95 D~~-----------~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 95 NYV-----------M-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CSS-----------S-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCC-----------C-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 965 6 9999999999999977666678988864
No 76
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.29 E-value=1.3e-11 Score=137.44 Aligned_cols=105 Identities=18% Similarity=0.310 Sum_probs=86.8
Q ss_pred cEEEEE-EEEcCCCCCCC--CCCCCcEEEEEEEcCCCceeeEeeeeeecCC-CCCceeeeEEEEEeeCceeEEEEEEEEc
Q 008558 47 SQIELS-FSAADLRDRDV--LSKSDPMLVVYMKARDGALVEVGRTEVVLNS-LNPTWITKHIITYQFEVVQTLVFRIYDV 122 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~--~sksDPyv~v~~~~~~~~~~~~~rTevi~n~-lNP~w~e~f~i~~~fe~~q~L~~~VyD~ 122 (561)
..+.++ ++|++|+.+|. .+++||||+|.+.+.... ....||+++++| +||+|+|+|.|.+..++...|+|.|||+
T Consensus 497 ~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 497 ERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp EEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred eEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 455555 69999999984 789999999999652111 247899999998 9999999999988877778999999999
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|.. +++++||++.++|.+|..+ ..|++|.+
T Consensus 576 D~~-----------~~dd~iG~~~ipl~~L~~G---~r~v~L~d 605 (624)
T 1djx_A 576 DSS-----------SKNDFIGQSTIPWNSLKQG---YRHVHLLS 605 (624)
T ss_dssp CSS-----------SCCEEEEEEEEEGGGBCCE---EEEEEEEC
T ss_pred CCC-----------CCCceeEEEEEEHHHcCCC---cEEEeCCC
Confidence 965 6899999999999999753 35888866
No 77
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.26 E-value=2.3e-11 Score=108.46 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=70.3
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeec-CCCCCceeeeEEEEEeeCceeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~-n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~ 124 (561)
..+.++ ++|++|.. .+++||||+|. .. ..||.+++ +++||.|+|.|.|.... ....|+|+|||+|
T Consensus 5 ~~L~V~V~~A~~l~~---~g~~DPYv~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d- 71 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QEKFNTYVTLK-VQ-------NVKSTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG- 71 (131)
T ss_dssp EEEEEEEEEEECSSC---GGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-
T ss_pred eEEEEEEEEeECCCC---CCCcCeEEEEE-ec-------CEEEeEecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-
Confidence 345555 57888753 67899999999 21 33566665 79999999999988764 3347999999999
Q ss_pred CcccccccccccccceeeeeeEeechhhhccC--CeeEEEEc
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRK--NRSLTLDL 164 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~--~~~~~~~L 164 (561)
. +++++||++.++|.++.... +...|.++
T Consensus 72 ~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~ 102 (131)
T 2cjt_A 72 L-----------IWDTMVGTVWIPLRTIRQSNEEGPGEWLTL 102 (131)
T ss_dssp S-----------SCEEEEEEEEEEGGGSCBCSSCCCCEEEEC
T ss_pred C-----------CCCCeEEEEEEEHHHhhhcCCCCccccEEc
Confidence 5 57999999999999987543 22245555
No 78
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.22 E-value=6.8e-11 Score=105.40 Aligned_cols=112 Identities=12% Similarity=0.151 Sum_probs=89.5
Q ss_pred EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeec-CCCCCceeeeEEEEEe--eCceeEEEEEEEEccCCcccc
Q 008558 53 FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQ--FEVVQTLVFRIYDVDTQFHNV 129 (561)
Q Consensus 53 isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~-n~lNP~w~e~f~i~~~--fe~~q~L~~~VyD~D~~~~~~ 129 (561)
.+|.+|+ +++|||+++.+.. ...+|++++ +++||+|+|.|.++.. .+....|.|.|||++..
T Consensus 28 ~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v---- 92 (144)
T 3l9b_A 28 KTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV---- 92 (144)
T ss_dssp EEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT----
T ss_pred EEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc----
Confidence 4789998 5899999999964 789999998 6999999999988754 34556999999999976
Q ss_pred cccccccccceeeeeeEeechhhhccCCeeEEEEccccccccccccccCCCCCCCcccceEEeecceeccc
Q 008558 130 DVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINS 200 (561)
Q Consensus 130 ~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i~~~ 200 (561)
+++.+||++.++|.+++......++.+|.+ .+. + ...++|.+.+.+.++.
T Consensus 93 -------~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD-----------~n~--~-~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 93 -------FSNKLIGTFRMVLQKVVEENRVEVSDTLID-----------DNN--A-IIKTSLSMEVRYQAAD 142 (144)
T ss_dssp -------SCCEEEEEEEEESHHHHHHSEEEEEEEEEC-----------TTS--C-EEEEEEEEEEEEEETT
T ss_pred -------cCCCEEEEEEEEhHHhccCCeEEEeecccC-----------CCC--C-ccccEEEEEEEecCCC
Confidence 789999999999999998876666667765 221 1 3347888888776654
No 79
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.20 E-value=4.2e-11 Score=106.76 Aligned_cols=81 Identities=14% Similarity=0.254 Sum_probs=64.2
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeec-CCCCCceec-ceeeeeecCCCCccEEEEEEeccC
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 280 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~ 280 (561)
+.+.+++|++|+. .|++|||+++. .. .+||.+++ +++||.||| |.|.+. +....|.|+|||+|
T Consensus 7 L~V~V~~A~~l~~---~g~~DPYv~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~---~~~~~L~~~V~D~d- 71 (131)
T 2cjt_A 7 LCVGVKKAKFDGA---QEKFNTYVTLK-VQ-------NVKSTTIAVRGSQPSWEQDFMFEIN---RLDLGLTVEVWNKG- 71 (131)
T ss_dssp EEEEEEEEECSSC---GGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEEEC---CCSSEEEEEEEECC-
T ss_pred EEEEEEEeECCCC---CCCcCeEEEEE-ec-------CEEEeEecCCCCCceECCEEEEEEe---CCCCeEEEEEEECC-
Confidence 4556788998852 68899999998 22 23566655 799999998 776664 23567999999999
Q ss_pred CCCCceeEEEEEehhhHh
Q 008558 281 NGKHDLIGKVQKSLADLE 298 (561)
Q Consensus 281 ~g~~d~IG~~~i~l~~l~ 298 (561)
.++|++||++.++|.++.
T Consensus 72 ~~~dd~iG~~~i~l~~l~ 89 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIR 89 (131)
T ss_dssp SSCEEEEEEEEEEGGGSC
T ss_pred CCCCCeEEEEEEEHHHhh
Confidence 889999999999999985
No 80
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.19 E-value=9.3e-11 Score=109.02 Aligned_cols=86 Identities=10% Similarity=0.118 Sum_probs=68.1
Q ss_pred cEEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeec-CCCCCceeeeEEEEEeeCceeEEEEEEEEccC
Q 008558 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (561)
Q Consensus 47 ~~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~-n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~ 124 (561)
..+.++ ++|++|. ..+++||||+|. .. ..||.+++ +++||.|+|+|.|.... ....|+|+|||+|
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d- 80 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLK-VQ-------NVESTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG- 80 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEECCC-TTSEEEEEEEECC-
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEE-ec-------ceEEEEecCCCCCCCCCCEEEEEeeC-CCCEEEEEEEECC-
Confidence 456666 5888774 368899999999 21 34677776 69999999999988763 3347999999999
Q ss_pred CcccccccccccccceeeeeeEeechhhhccC
Q 008558 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRK 156 (561)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~ 156 (561)
. +++++||++.++|.++....
T Consensus 81 ~-----------~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 81 L-----------IWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp S-----------SCCEEEEEEEEEGGGSCBCS
T ss_pred C-----------CCCceEEEEEEEHHHhcccC
Confidence 5 57999999999999986543
No 81
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=9e-11 Score=132.46 Aligned_cols=122 Identities=17% Similarity=0.348 Sum_probs=96.3
Q ss_pred cccceEEeecceeccccccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeee
Q 008558 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (561)
Q Consensus 185 ~~~G~I~i~~e~i~~~~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~ 263 (561)
..+|.|.+.... ....+.+.+++|++|+.+|.+|++|||+++++..+ +.....++|+++++++||+|++ |.+.+..
T Consensus 158 ~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~-~~~~~k~kT~v~~~tlnP~wne~f~f~~~~ 234 (674)
T 3pfq_A 158 ERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPD-PKSESKQKTKTIKSSLNPEWNETFRFQLKE 234 (674)
T ss_dssp CCSCEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESC-SSCCSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred ccccccccccee--ccceeeeeeecccccCCCCcccccCcccccccccC-ccccccccccccccccCCCccceeeeeccc
Confidence 457888877654 24557777899999999999999999999998653 3345678999999999999998 6555432
Q ss_pred cCCCCccEEEEEEeccCCCCCceeEEEEEehhhHhhccCCCceeeeec
Q 008558 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (561)
Q Consensus 264 l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n 311 (561)
.+..+.|.|+|||||..+++++||++.+++.++.. .....|+.++.
T Consensus 235 -~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~-~~~~~w~~Lls 280 (674)
T 3pfq_A 235 -SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK-AGVDGWFKLLS 280 (674)
T ss_dssp -TTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHH-CCEEEEEECBC
T ss_pred -CCccceeeeEEeecccccccccccccccchhhhcc-CCcccceeecc
Confidence 34466799999999999999999999999999973 33344555543
No 82
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.10 E-value=2.9e-10 Score=101.33 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=78.2
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeec-CCCCCceec-ceeeeeecCCCCccEEEEEEeccC
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 280 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~ 280 (561)
+.+.+.+|++|+ |++|||+++.... ..+||++++ +++||.|+| |..++...-+.+..|.|.|+|+++
T Consensus 23 L~V~l~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 23 LIVHLKTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 556678899998 5899999998843 578999998 699999999 777664334567899999999999
Q ss_pred CCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 281 NGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 281 ~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
.+++++||++.++|+++.....-...-+|++.+
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n 124 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDN 124 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECTT
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCCC
Confidence 999999999999999996422111234455544
No 83
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.09 E-value=2.2e-10 Score=129.24 Aligned_cols=106 Identities=20% Similarity=0.248 Sum_probs=87.8
Q ss_pred EEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeC-ceeEEEEEEEEccCC
Q 008558 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDTQ 125 (561)
Q Consensus 48 ~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe-~~q~L~~~VyD~D~~ 125 (561)
.+.+. ++|++|+++|..|++||||++++.+ ++.+....||+++++|+||.|++.|.+.+... ..+.|.|+|||+|..
T Consensus 173 ~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp EEEEEEEEEESCCCCSTTSSCCEEEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred eeeeeeecccccCCCCcccccCccccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 34444 6899999999999999999999976 23344678999999999999999998876543 345799999999975
Q ss_pred cccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 126 FHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 126 ~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
+++++||++.++|.++.... ...|++|..
T Consensus 252 -----------~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 252 -----------SRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp -----------SCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred -----------cccccccccccchhhhccCC-cccceeecc
Confidence 78999999999999998754 467888855
No 84
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.06 E-value=2.3e-10 Score=106.40 Aligned_cols=81 Identities=12% Similarity=0.239 Sum_probs=64.7
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeec-CCCCCceec-ceeeeeecCCCCccEEEEEEeccC
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 280 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~ 280 (561)
+.+.+++|++|+ ..|++|||+++. .. .+||.+++ +++||.||| |.|.+. +....|.|+|||+|
T Consensus 16 L~V~V~~A~~l~---~~g~~DPYV~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~---~~~~~L~~~V~D~d- 80 (167)
T 2cjs_A 16 LCVGVKKAKFDG---AQEKFNTYVTLK-VQ-------NVESTTIAVRGSQPSWEQDFMFEIN---RLDLGLTVEVWNKG- 80 (167)
T ss_dssp EEEEEEEEECSS---CGGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEECC---CTTSEEEEEEEECC-
T ss_pred EEEEEEEEECCC---CCCCCCeEEEEE-ec-------ceEEEEecCCCCCCCCCCEEEEEee---CCCCEEEEEEEECC-
Confidence 445577888774 368899999998 22 24677766 699999998 776664 33567999999999
Q ss_pred CCCCceeEEEEEehhhHh
Q 008558 281 NGKHDLIGKVQKSLADLE 298 (561)
Q Consensus 281 ~g~~d~IG~~~i~l~~l~ 298 (561)
.++|++||++.++|.++.
T Consensus 81 ~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp SSCCEEEEEEEEEGGGSC
T ss_pred CCCCceEEEEEEEHHHhc
Confidence 889999999999999985
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.06 E-value=9.4e-11 Score=131.89 Aligned_cols=103 Identities=14% Similarity=0.225 Sum_probs=82.2
Q ss_pred cccceeEeeecCCCc---CCCCCCCCceEEEEEEcCCCceeeEEEceeecCCCCCceec-ceeeeeecCCCCccEEEEEE
Q 008558 201 KTTTELILRCSDLDC---KDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECF 276 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~---~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~ 276 (561)
..+.+.+++|++|+. +|.+|++|||+++++..+. ...+||+++++++||+|+| |.+.+... ....|+|+||
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~---~~k~kTkvik~tlNPvWNEtF~F~v~~~--~~~~L~~~V~ 92 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNNDINPVWNETFEFILDPN--QENVLEITLM 92 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTTCSSCEEEEEEEEEECTT--SCCBCEEEEE
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCC---CCeEecceEcCCCCCeeeeEEEEEecCC--CCCEEEEEEE
Confidence 445667899999999 8999999999999986421 2578999999999999998 77766432 3568999999
Q ss_pred eccCCCCCceeEEEEEehhhHhhccCCCceeee
Q 008558 277 NFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 309 (561)
Q Consensus 277 D~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l 309 (561)
|+|..+ +++||++.++|.+|........|++|
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEec
Confidence 999999 99999999999999633223345555
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.03 E-value=5.1e-10 Score=124.60 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=82.9
Q ss_pred ccceeEeeecCCCcCCC--CCCCCceEEEEEEcCCCceeeEEEceeecCC-CCCceec-ceeeeeecCCCCccEEEEEEe
Q 008558 202 TTTELILRCSDLDCKDL--FSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~--~g~sDPy~~i~~~~~~g~~~~~~kTevik~t-lnP~W~e-f~~~~~~l~d~~~~L~ieV~D 277 (561)
.+.+.+++|++|+.+|. .|.+|||+++.+.+... -...+||++++++ +||+||| |.+.+... ....|.|+|||
T Consensus 498 ~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~-d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~--el~~L~~~V~D 574 (624)
T 1djx_A 498 RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGR-DTGSRQTAVITNNGFNPRWDMEFEFEVTVP--DLALVRFMVED 574 (624)
T ss_dssp EEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGG-GCEEEECCCCTTCSSSCEEEEEEEEEESCG--GGCEEEEEEEE
T ss_pred EEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCC-CcceeecccccCCCCCCccCceEEEEEecC--CCCEEEEEEEE
Confidence 35567899999999884 78999999999865211 1357899999998 9999998 66655322 12579999999
Q ss_pred ccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 278 ~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
+|..+++++||++.++|.+|.. + -.+++|.+.+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~--G-~r~v~L~d~~ 607 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ--G-YRHVHLLSKN 607 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC--E-EEEEEEECTT
T ss_pred cCCCCCCceeEEEEEEHHHcCC--C-cEEEeCCCCC
Confidence 9999999999999999999953 2 2467776644
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.83 E-value=3.2e-10 Score=122.87 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=11.0
Q ss_pred EEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCC---CCCceeeeEEEEEeeCceeEEEEEEEE-c
Q 008558 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNS---LNPTWITKHIITYQFEVVQTLVFRIYD-V 122 (561)
Q Consensus 48 ~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~---lNP~w~e~f~i~~~fe~~q~L~~~VyD-~ 122 (561)
+++++ ++|++|+++| ||||++++.+. ..+||.++++| +||.|+|+|.|..... .+.|.|+||| +
T Consensus 12 ~L~V~VieAk~L~~~d-----dpYv~v~l~~~-----~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 12 VLKLWIIEARELPPKK-----RYYCELCLDDM-----LYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp CC-------------------------------------------------------CCEECC-----------------
T ss_pred EEEEEEEEcCCcCCCC-----CCeEEEEECCe-----EEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 45555 6999999988 99999999641 36799999999 9999999998864322 4799999999 4
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
|... ..+++++||++.+++.++........|++|..
T Consensus 81 d~~~--------~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 81 DKKR--------KKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ----------------------------------CCEECC----
T ss_pred Cccc--------cCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 5210 13689999999999999987666678999954
No 88
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.82 E-value=1.1e-08 Score=116.96 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=74.0
Q ss_pred EEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcC-CCceeeEeeeeeecCC-CCCceee-eEEEE-EeeCceeEEEEEEEEc
Q 008558 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKAR-DGALVEVGRTEVVLNS-LNPTWIT-KHIIT-YQFEVVQTLVFRIYDV 122 (561)
Q Consensus 48 ~vel~-isa~~L~~~D~~sksDPyv~v~~~~~-~~~~~~~~rTevi~n~-lNP~w~e-~f~i~-~~fe~~q~L~~~VyD~ 122 (561)
.+.+. |+|++|+.+ ++||||+|.+.+. ... ....||+++++| +||+|++ +|.|. +...+...|+|.|||+
T Consensus 726 ~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~-~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDT-RRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEESCCSS----CCCEEEEEEEESSTTTC-BCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred EEEEEEEEeccCccc----CCCcEEEEEEeCCCccc-ccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 45554 699999863 6899999999751 111 134799999875 9999999 69887 6666667999999996
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
| ++|||++.++|..|..+ -...+|.+
T Consensus 801 d---------------ddfiG~~~lpL~~L~~G---yR~vpL~~ 826 (885)
T 3ohm_B 801 G---------------GKFVGHRILPVSAIRSG---YHYVCLRN 826 (885)
T ss_dssp T---------------TEEEEEEEEETTTCCCE---EEEEEEEC
T ss_pred C---------------ccEEeeEEEEHHHcCCC---ceEEEecC
Confidence 5 57999999999998653 24578866
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.79 E-value=2e-08 Score=114.22 Aligned_cols=97 Identities=18% Similarity=0.245 Sum_probs=75.2
Q ss_pred EEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCC-CceeeEeeeeeecCC-CCCceeee-EEEE-EeeCceeEEEEEEEEc
Q 008558 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARD-GALVEVGRTEVVLNS-LNPTWITK-HIIT-YQFEVVQTLVFRIYDV 122 (561)
Q Consensus 48 ~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~-~~~~~~~rTevi~n~-lNP~w~e~-f~i~-~~fe~~q~L~~~VyD~ 122 (561)
.+.+. ++|++|+++ ++||||+|.+.+.. .......||+++++| +||+|++. |.|. +..++...|+|.|||+
T Consensus 651 ~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 651 TIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred EEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 45555 699999864 68999999997521 111246799999865 99999997 9887 6666677999999996
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
| ++|||++.++|..|..+ -.+.+|.+
T Consensus 727 d---------------ddfiG~~~ipL~~L~~G---yR~vpL~~ 752 (816)
T 3qr0_A 727 N---------------GKFIGHRVMPLDGIKPG---YRHVPLRN 752 (816)
T ss_dssp T---------------SCEEEEEEEESTTCCCE---EEEEEEEC
T ss_pred C---------------CCeeeEEEEEHHHcCCc---ceEEEEeC
Confidence 4 57999999999998753 24678866
No 90
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.78 E-value=6.7e-10 Score=120.31 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=8.3
Q ss_pred cccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCC---CCCceec-ceeeeeecCCCCccEEEEEE
Q 008558 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE---TKPTWKS-VFLNIQQVGSKDSPLIIECF 276 (561)
Q Consensus 201 ~~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~t---lnP~W~e-f~~~~~~l~d~~~~L~ieV~ 276 (561)
+.+.+.+++|++|+++| |||++++... ....||+++++| +||.||| |.+... . ....|.|+||
T Consensus 11 ~~L~V~VieAk~L~~~d-----dpYv~v~l~~-----~~~~kT~v~~kt~~glnP~WnE~F~f~~~--~-~~~~L~v~V~ 77 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK-----RYYCELCLDD-----MLYARTTSKPRSASGDTVFWGEHFEFNNL--P-AVRALRLHLY 77 (483)
T ss_dssp ECC-------------------------------------------------------CCEECC----------------
T ss_pred cEEEEEEEEcCCcCCCC-----CCeEEEEECC-----eEEeeeeEEeCCCCCCCCccccEEEEecC--C-CccEEEEEEE
Confidence 34566789999999887 9999998843 235799999999 9999998 666532 1 1468999999
Q ss_pred e-cc---CCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 277 N-FN---SNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 277 D-~d---~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
| || ..+++++||++.+++.++........|++|..++
T Consensus 78 d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 78 RDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp -----------------------------CCEECC------
T ss_pred ecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 9 55 3678999999999999996433344678887654
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.76 E-value=2.5e-08 Score=113.74 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=74.6
Q ss_pred EEEEE-EEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeee-eecC-CCCCceee-eEEE-EEeeCceeEEEEEEEEc
Q 008558 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTE-VVLN-SLNPTWIT-KHII-TYQFEVVQTLVFRIYDV 122 (561)
Q Consensus 48 ~vel~-isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTe-vi~n-~lNP~w~e-~f~i-~~~fe~~q~L~~~VyD~ 122 (561)
.+.+. ++|++|++ +++||||+|.+.+....-....||+ ++++ ++||+|++ +|.| .+..++...|+|.|||+
T Consensus 679 ~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~ 754 (799)
T 2zkm_X 679 TLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEE 754 (799)
T ss_dssp EEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEET
T ss_pred eEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEe
Confidence 46665 69999985 4799999999964111111257999 8875 59999999 6998 77777777999999997
Q ss_pred cCCcccccccccccccceeeeeeEeechhhhccCCeeEEEEccc
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~~~~~~~L~~ 166 (561)
| ++|||++.++|.+|..+ ..+++|.+
T Consensus 755 d---------------~d~iG~~~ipl~~L~~G---~r~v~L~~ 780 (799)
T 2zkm_X 755 G---------------NKFLGHRIIPINALNSG---YHHLCLHS 780 (799)
T ss_dssp T---------------TEEEEEEEEEGGGBCCE---EEEEEEEC
T ss_pred C---------------CCccceEeeehhhcCCC---cEEEeccC
Confidence 5 57999999999999642 34678865
No 92
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.47 E-value=2.3e-07 Score=106.08 Aligned_cols=98 Identities=9% Similarity=0.071 Sum_probs=71.3
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEceeecCC-CCCceec--ceee-eeecCCCCccEEEEEEec
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIECFNF 278 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTevik~t-lnP~W~e--f~~~-~~~l~d~~~~L~ieV~D~ 278 (561)
+.+.+++|++|+.+ ++|||+++.+.+........+||+++++| +||+||+ |.|. +... ....|+|+|||+
T Consensus 727 L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p--ela~Lrf~V~D~ 800 (885)
T 3ohm_B 727 LRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP--TLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG--GGCEEEEEEEET
T ss_pred EEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC--CcCEEEEEEEcC
Confidence 55678999999863 68999999987521111235799999875 9999997 6665 3211 134799999998
Q ss_pred cCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 279 NSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 279 d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
| +++||++.++|..|+. + -...+|.+..
T Consensus 801 d----ddfiG~~~lpL~~L~~--G-yR~vpL~~~~ 828 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRS--G-YHYVCLRNEA 828 (885)
T ss_dssp T----TEEEEEEEEETTTCCC--E-EEEEEEECTT
T ss_pred C----ccEEeeEEEEHHHcCC--C-ceEEEecCCC
Confidence 7 7999999999999963 2 2356776643
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.41 E-value=4.2e-07 Score=103.69 Aligned_cols=98 Identities=11% Similarity=0.144 Sum_probs=71.1
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCCceeeEEEce-eecC-CCCCceec--cee-eeeecCCCCccEEEEEEe
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTE-VLKN-ETKPTWKS--VFL-NIQQVGSKDSPLIIECFN 277 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~~~~kTe-vik~-tlnP~W~e--f~~-~~~~l~d~~~~L~ieV~D 277 (561)
+.+.+++|++|+. +++|||+++.+.+........+||+ ++++ ++||+||+ |.| .+... .-..|.|+|||
T Consensus 680 L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~--el~~Lr~~V~D 753 (799)
T 2zkm_X 680 LSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMP--ELASLRVAVME 753 (799)
T ss_dssp EEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSG--GGCEEEEEEEE
T ss_pred EEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccC--CccEEEEEEEE
Confidence 5566899999985 4789999999865212212368999 8875 59999997 666 44211 12379999999
Q ss_pred ccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 278 ~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
++ +++||++.+++..|.. + -..++|.+..
T Consensus 754 ~d----~d~iG~~~ipl~~L~~--G-~r~v~L~~~~ 782 (799)
T 2zkm_X 754 EG----NKFLGHRIIPINALNS--G-YHHLCLHSES 782 (799)
T ss_dssp TT----TEEEEEEEEEGGGBCC--E-EEEEEEECTT
T ss_pred eC----CCccceEeeehhhcCC--C-cEEEeccCCC
Confidence 96 7999999999999953 2 2356776543
No 94
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.29 E-value=9.7e-06 Score=71.11 Aligned_cols=112 Identities=15% Similarity=0.208 Sum_probs=76.8
Q ss_pred cEEEEEEEEcCCCC-CC-CCCCCCcEEEEEEEcCCCceeeEeee-eeecCCCCCceeeeEEEEEeeCceeEEEEEEEEcc
Q 008558 47 SQIELSFSAADLRD-RD-VLSKSDPMLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVD 123 (561)
Q Consensus 47 ~~vel~isa~~L~~-~D-~~sksDPyv~v~~~~~~~~~~~~~rT-evi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D 123 (561)
.-+++.+..-++-. +. .....||||.|.+... ...+.++| -+.+.|..|.|++.|...+. .-+.|.|.|++ |
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh-~ 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKG-K 84 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEEC-S
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeee--eeccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEc-C
Confidence 44555544444322 11 1235899999998751 11134899 88889999999999875544 44588999994 2
Q ss_pred CCcccccccccccccceeeeeeEeechhhhcc-----CCeeEEEEccccccccccccccCCCCCCCcccceEEeeccee
Q 008558 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (561)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~-----~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~i 197 (561)
..+|+..|.+.+.+|... .....|++|++ .|+|++.++..
T Consensus 85 --------------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--------------------~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 --------------NVDLISETTVELYSLAERCRKNNGKTEIWLELKP--------------------QGRMLMNARYF 129 (138)
T ss_dssp --------------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--------------------SCEEEEEEEEC
T ss_pred --------------CCCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEEE
Confidence 138999999999999843 23468999955 58888877653
No 95
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.28 E-value=3.3e-06 Score=96.06 Aligned_cols=98 Identities=14% Similarity=0.101 Sum_probs=71.6
Q ss_pred cceeEeeecCCCcCCCCCCCCceEEEEEEcCCC-ceeeEEEceeecCC-CCCceec--ceee-eeecCCCCccEEEEEEe
Q 008558 203 TTELILRCSDLDCKDLFSRNDPFLVISKIVESG-THIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIECFN 277 (561)
Q Consensus 203 ~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g-~~~~~~kTevik~t-lnP~W~e--f~~~-~~~l~d~~~~L~ieV~D 277 (561)
+.+.+++|++|+.+ ++|||+++.+.+... .....+||++++++ +||+||+ |.|. +... .-..|+|+|||
T Consensus 652 L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~p--ela~Lrf~V~D 725 (816)
T 3qr0_A 652 IEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP--DLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCG--GGCEEEEEEEE
T ss_pred EEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCC--CccEEEEEEEe
Confidence 55668999999863 689999999875211 11257899999875 9999996 6665 3211 12479999999
Q ss_pred ccCCCCCceeEEEEEehhhHhhccCCCceeeeeccc
Q 008558 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (561)
Q Consensus 278 ~d~~g~~d~IG~~~i~l~~l~~~~~~~~~~~l~n~~ 313 (561)
++ +++||++.++|..|.. + -...+|.+..
T Consensus 726 ~d----ddfiG~~~ipL~~L~~--G-yR~vpL~~~~ 754 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKP--G-YRHVPLRNES 754 (816)
T ss_dssp TT----SCEEEEEEEESTTCCC--E-EEEEEEECTT
T ss_pred cC----CCeeeEEEEEHHHcCC--c-ceEEEEeCCC
Confidence 85 7999999999999963 2 2356776644
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.27 E-value=2.1e-05 Score=68.15 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=69.2
Q ss_pred CCCCcEEEEEEEcCCCceeeEeee-eeecCCCCCceeeeEEEEEeeCceeEEEEEEEEccCCcccccccccccccceeee
Q 008558 65 SKSDPMLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLG 143 (561)
Q Consensus 65 sksDPyv~v~~~~~~~~~~~~~rT-evi~n~lNP~w~e~f~i~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~LG 143 (561)
...||||.|.+... ...+.++| -+.++|..|.|++.|..... .-+.|.+.|++.. .+|+.
T Consensus 25 ~~lDPy~aV~vdE~--~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a---------------~~fvA 85 (126)
T 1yrk_A 25 EANQPFCAVKMKEA--LSTERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLMRAA---------------EEPVS 85 (126)
T ss_dssp SSCCCEEEEEEEEE--EEETTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEEEET---------------TEEEE
T ss_pred ccCCceEEEEeeee--EEcccceeecccCCCCCcCccceEEeeee--CCEEEEEEEEcCC---------------CCeee
Confidence 36899999998751 11134587 77889999999999876654 3458999999522 38999
Q ss_pred eeEeechhhhcc-----CCeeEEEEccccccccccccccCCCCCCCcccceEEeecce
Q 008558 144 EATCTLSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEE 196 (561)
Q Consensus 144 ~~~~~L~el~~~-----~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~ 196 (561)
.|.+.+.+|... .....|++|++ .|+|++.++.
T Consensus 86 n~tV~~edL~~~c~~~~g~~e~WvdLeP--------------------~Gkl~~~i~~ 123 (126)
T 1yrk_A 86 EVTVGVSVLAERCKKNNGKAEFWLDLQP--------------------QAKVLMSVQY 123 (126)
T ss_dssp EEEEEHHHHHHHHHTTTTEEEEEEECBS--------------------SCEEEEEEEE
T ss_pred EEEEEHHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEE
Confidence 999999999843 23468999955 5888887654
No 97
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=97.91 E-value=0.00017 Score=71.94 Aligned_cols=155 Identities=17% Similarity=0.208 Sum_probs=107.2
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEeCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLN 424 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y-~~ai~~i~~il~~yd~---d~~~p~~GfG~~~~~~~~~~~f~l~ 424 (561)
.+++++.||-++| + . ...+ +++..++..++..+.. .-++-++.|+.. +..-|+|+
T Consensus 21 ~~div~vlD~SgS---------M---~----~~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 79 (281)
T 4hqf_A 21 EVDLYLLMDGSGS---------I---R----RHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNN-----AREIIRLH 79 (281)
T ss_dssp CEEEEEEEECCCC---------S---S----THHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETT-----EEEEEEEC
T ss_pred ceeEEEEEeCCCC---------c---C----HHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCC-----ceEEEEcc
Confidence 4889999998885 2 2 1244 6677777777777765 556888889865 33457776
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCHHHHHHHHHHcc
Q 008558 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 504 (561)
Q Consensus 425 ~~~~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~as 504 (561)
.... ...+.++++-...-......|-|+...-|+.|.+...... .....-.++++||||..+|..++.+++..+.
T Consensus 80 ~~~~----~~~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~-~r~~~~~~iillTDG~~~d~~~~~~~~~~l~ 154 (281)
T 4hqf_A 80 SDAS----KNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRI-NRENANQLVVILTDGIPDSIQDSLKESRKLS 154 (281)
T ss_dssp SSCS----SCHHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSC-CCTTCEEEEEEEESSCCSCHHHHHHHHHHHH
T ss_pred ccCc----cCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHhcc-CCCCCCEEEEEEecCCCCCcHHHHHHHHHHH
Confidence 5321 1234554444333224457899999999999977655331 1233567999999999998777777777777
Q ss_pred CCCeEEEEEeecCC-CchhhhhcccC
Q 008558 505 DLPLSILIIGVGGA-DFKEMEILDAD 529 (561)
Q Consensus 505 ~~p~siiivGvG~~-~f~~m~~ld~d 529 (561)
...+-|..||||++ +-+.|+.+-+.
T Consensus 155 ~~gv~i~~igiG~~~~~~~L~~iA~~ 180 (281)
T 4hqf_A 155 DRGVKIAVFGIGQGINVAFNRFLVGC 180 (281)
T ss_dssp HTTCEEEEEEESSSCCHHHHHHHTTS
T ss_pred HCCCEEEEEeCCCccCHHHHHhhhCC
Confidence 78899999999985 77777877643
No 98
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=97.89 E-value=7.7e-05 Score=73.98 Aligned_cols=155 Identities=12% Similarity=0.182 Sum_probs=105.8
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 424 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y-~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~ 424 (561)
.+++++.||-+.| + . ...+ +++...+..++..++ .+-++-++.|+.. +..-|+|+
T Consensus 18 ~~DivfvlD~SgS---------M---~----~~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 76 (266)
T 4hqo_A 18 QVDLYLLVDGSGS---------I---G----YPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSY-----TTELIRLG 76 (266)
T ss_dssp CEEEEEEEECSTT---------T---C----HHHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSS-----EEEEECTT
T ss_pred ceeEEEEEECCCC---------c---C----hhHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCC-----cceEEecC
Confidence 4889999998885 2 2 1345 467777777777776 4556788888775 33356665
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCHHHHHHHHHHcc
Q 008558 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 504 (561)
Q Consensus 425 ~~~~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~as 504 (561)
.. .-...+.++++-.+.-......|.|+...-|+.|.+...... .....-.++++||||..+|..++.+++..+.
T Consensus 77 ~~----~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~~~~-~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~ 151 (266)
T 4hqo_A 77 SG----QSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRV-NREKAIQLVILMTDGVPNSKYRALEVANKLK 151 (266)
T ss_dssp SH----HHHCHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHTTC-SCTTSEEEEEEEECSCCSCHHHHHHHHHHHH
T ss_pred CC----CccCHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHhhcc-ccCCCCeEEEEEccCCCCCchHHHHHHHHHH
Confidence 42 111234444443333223367899999999999976654431 2234568999999999999888888888887
Q ss_pred CCCeEEEEEeecCC-CchhhhhcccC
Q 008558 505 DLPLSILIIGVGGA-DFKEMEILDAD 529 (561)
Q Consensus 505 ~~p~siiivGvG~~-~f~~m~~ld~d 529 (561)
...+.|..||||++ +-+.|+.+-+.
T Consensus 152 ~~gi~i~~iGiG~~~~~~~L~~iA~~ 177 (266)
T 4hqo_A 152 QRNVRLAVIGIGQGINHQFNRLIAGC 177 (266)
T ss_dssp HTTCEEEEEECSSSCCHHHHHHHHTC
T ss_pred HCCCEEEEEecCcccCHHHHHHhhCC
Confidence 88999999999986 45555777643
No 99
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=97.80 E-value=0.00024 Score=65.69 Aligned_cols=151 Identities=14% Similarity=0.114 Sum_probs=94.5
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
.+++++.||-++| +.. . .....++++.+..-+ ..++-++-++.|+.. ....|+++.
T Consensus 7 ~~div~vlD~SgS---------M~~---~--~~~~~~~~~~~~~~~--~~~~~~v~lv~f~~~-----~~~~~~l~~--- 62 (185)
T 3n2n_F 7 GFDLYFILDKSGS---------VLH---H--WNEIYYFVEQLAHKF--ISPQLRMSFIVFSTR-----GTTLMKLTE--- 62 (185)
T ss_dssp EEEEEEEEECSGG---------GGG---G--HHHHHHHHHHHHHHC--CCTTEEEEEEEESSS-----EEEEEEEEC---
T ss_pred CeeEEEEEeCCCC---------hhh---h--HHHHHHHHHHHHHHh--CCCCcEEEEEEEecC-----ceEEeccCC---
Confidence 4788999998885 321 0 112223333333332 223456888888765 334567653
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCHH--HHHHHHHHccCC
Q 008558 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASDL 506 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~~--~t~~~i~~as~~ 506 (561)
..+.+.++-. .++.+...|.|++..-|+.+.+............-.++++||||..+|-. ...++...+...
T Consensus 63 -----~~~~~~~~i~-~l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~ 136 (185)
T 3n2n_F 63 -----DREQIRQGLE-ELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDL 136 (185)
T ss_dssp -----CHHHHHHHHH-HHHTCCCCSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHHH-HHhhhcCCCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHHC
Confidence 2334433332 23344568999999999999985432211223356799999999987654 335566666677
Q ss_pred CeEEEEEeecCCCchhhhhcccC
Q 008558 507 PLSILIIGVGGADFKEMEILDAD 529 (561)
Q Consensus 507 p~siiivGvG~~~f~~m~~ld~d 529 (561)
.+.|..||||+.+-..|+.+-++
T Consensus 137 gi~i~~igvg~~~~~~L~~iA~~ 159 (185)
T 3n2n_F 137 GAIVYAVGVKDFNETQLARIADS 159 (185)
T ss_dssp TEEEEEEECSSCCHHHHTTTSSS
T ss_pred CCEEEEEEeccCCHHHHHHHhCC
Confidence 89999999998888888887743
No 100
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=97.76 E-value=6.4e-05 Score=69.65 Aligned_cols=141 Identities=14% Similarity=0.088 Sum_probs=92.0
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC---CCcceeeecccCCCCCceeEEeCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD---KRFPAWGFGARPIDGPVSHCFNLNG 425 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d---~~~p~~GfG~~~~~~~~~~~f~l~~ 425 (561)
.+.+++.||-++| + . ...++.+...+..++..++.. -++-++.|+.. ...-|+|+.
T Consensus 17 ~~divfvlD~SgS---------m---~----~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~-----~~~~~~l~~ 75 (178)
T 2xgg_A 17 QLDICFLIDSSGS---------I---G----IQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTD-----VHLQWDLQS 75 (178)
T ss_dssp CEEEEEEEECCTT---------T---C----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTS
T ss_pred CeeEEEEEECCCC---------C---C----HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCc-----eEEEEeCCC
Confidence 4889999999885 2 2 145777778888888877632 57889999875 233466643
Q ss_pred CCCCCcccCHHHHHHHHHhhhccee-ecCCCCcHHHHHHHHHHHHhh-ccccCCceEEEEEEeCCcccCHHHHHHHHHHc
Q 008558 426 SNSYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQS-LANHGQKYFVLLIITDGVVTDLQETKDALVKA 503 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~~~~-~~gpt~f~~ii~~~~~~a~~~-~~~~~~~y~vlliltdg~i~d~~~t~~~i~~a 503 (561)
.. ....+.+.+ .+..+. ..|.|+...-|+.|.+..... .......-.++++||||..+|-....+++-.+
T Consensus 76 ~~----~~~~~~~~~----~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l 147 (178)
T 2xgg_A 76 PN----AVDKQLAAH----AVLDMPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEI 147 (178)
T ss_dssp GG----GSCHHHHHH----HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHH
T ss_pred CC----ccCHHHHHH----HHHhCCCCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHH
Confidence 11 113344433 334444 578999999999998864321 11122445789999999988754455555555
Q ss_pred cCCCeEEEEEeecCC
Q 008558 504 SDLPLSILIIGVGGA 518 (561)
Q Consensus 504 s~~p~siiivGvG~~ 518 (561)
....+.|..||||+.
T Consensus 148 ~~~gi~v~~igvG~~ 162 (178)
T 2xgg_A 148 RELGGIVTVLAVGHY 162 (178)
T ss_dssp HHTTCEEEEEECC--
T ss_pred HHCCCEEEEEEcCCc
Confidence 566899999999975
No 101
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=97.76 E-value=0.00021 Score=65.84 Aligned_cols=148 Identities=15% Similarity=0.154 Sum_probs=95.8
Q ss_pred eeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCCC
Q 008558 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNSY 429 (561)
Q Consensus 350 i~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~~ 429 (561)
+++++.+|-++| +.. . .....+.|...+..++. .+-++-++.|+.. ....++++.
T Consensus 7 ~dvv~vlD~SgS---------M~~---~-~~~~~~~~~~~~~~~~~---~~~~v~lv~f~~~-----~~~~~~~~~---- 61 (182)
T 1shu_X 7 FDLYFVLDKSGS---------VAN---N-WIEIYNFVQQLAERFVS---PEMRLSFIVFSSQ-----ATIILPLTG---- 61 (182)
T ss_dssp EEEEEEEECSGG---------GGG---G-HHHHHHHHHHHHHHCCC---TTEEEEEEEESSS-----EEEEEEEEC----
T ss_pred eeEEEEEECCCC---------ccc---C-HHHHHHHHHHHHHHhcC---CCceEEEEEeCCC-----ceEEECCCC----
Confidence 788999999985 321 1 11222333444444443 4566888888765 223456542
Q ss_pred CcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCHH--HHHHHHHHccCCC
Q 008558 430 CEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASDLP 507 (561)
Q Consensus 430 ~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~~--~t~~~i~~as~~p 507 (561)
..+.+.++ -+.+..+...|.|++..-|+.+.+...... ....-.++++||||..++-. ...+++..+....
T Consensus 62 ----~~~~~~~~-l~~l~~~~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~ 134 (182)
T 1shu_X 62 ----DRGKISKG-LEDLKRVSPVGETYIHEGLKLANEQIQKAG--GLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLG 134 (182)
T ss_dssp ----CHHHHHHH-HHHHHTCCCCSCCCHHHHHHHHHHHHHHHT--GGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTT
T ss_pred ----CHHHHHHH-HHhcccCCCCCCchHHHHHHHHHHHHHhcc--CCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhCC
Confidence 22333222 233345568899999999999998766542 23445799999999987643 2344555666778
Q ss_pred eEEEEEeecCCCchhhhhcccC
Q 008558 508 LSILIIGVGGADFKEMEILDAD 529 (561)
Q Consensus 508 ~siiivGvG~~~f~~m~~ld~d 529 (561)
+.|..||||+.+-..|+.+-+.
T Consensus 135 i~i~~igvg~~~~~~L~~ia~~ 156 (182)
T 1shu_X 135 ASVYCVGVLDFEQAQLERIADS 156 (182)
T ss_dssp CEEEEEECSSCCHHHHHHHSSS
T ss_pred CEEEEEeCCcCCHHHHHHHhCC
Confidence 9999999999888888888744
No 102
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.00032 Score=66.73 Aligned_cols=140 Identities=16% Similarity=0.190 Sum_probs=92.7
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
.+++++.+|-++| +...+. .++..+.|-.++..++..+. +-++-++.|+.. ....+|++.+
T Consensus 11 ~~~iv~vlD~SgS---------M~~~d~--~~~r~~~ak~~~~~~~~~~~-~~~v~lv~F~~~-----~~~~~~~~~~-- 71 (218)
T 3ibs_A 11 GVEVIIALDISNS---------MLAQDV--QPSRLEKAKRLISRLVDELD-NDKVGMIVFAGD-----AFTQLPITSD-- 71 (218)
T ss_dssp CCEEEEEEECSGG---------GGCCSS--SSCHHHHHHHHHHHHHHTCS-SCEEEEEEESSS-----EEEEEEEESC--
T ss_pred CCcEEEEEECCcC---------cccccC--CcCHHHHHHHHHHHHHHhCC-CCeEEEEEECCC-----ceEeCCCCCC--
Confidence 4678999999994 443332 25788888888888888876 457999999875 3345666432
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCHHHHHHHHHHccCCCe
Q 008558 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKASDLPL 508 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~as~~p~ 508 (561)
.+.+.++-...-+.....|.|++..-|+.|.+.... ....-.++++||||..++- ...+++..+....+
T Consensus 72 ------~~~~~~~l~~l~~~~~~~g~T~l~~al~~a~~~l~~----~~~~~~~ivllTDG~~~~~-~~~~~~~~~~~~~i 140 (218)
T 3ibs_A 72 ------YISAKMFLESISPSLISKQGTAIGEAINLATRSFTP----QEGVGRAIIVITDGENHEG-GAVEAAKAAAEKGI 140 (218)
T ss_dssp ------HHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCS----CSSCCEEEEEEECCTTCCS-CHHHHHHHHHTTTE
T ss_pred ------HHHHHHHHHhcCcccCCCCCCcHHHHHHHHHHHHhh----CCCCCcEEEEEcCCCCCCC-cHHHHHHHHHhcCC
Confidence 233332222222223447899999988887754332 2345568999999988643 33444445556789
Q ss_pred EEEEEeecCC
Q 008558 509 SILIIGVGGA 518 (561)
Q Consensus 509 siiivGvG~~ 518 (561)
.|..||+|..
T Consensus 141 ~v~~igig~~ 150 (218)
T 3ibs_A 141 QVSVLGVGMP 150 (218)
T ss_dssp EEEEEEESCT
T ss_pred EEEEEEecCC
Confidence 9999999974
No 103
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=97.71 E-value=2.6e-05 Score=73.18 Aligned_cols=149 Identities=18% Similarity=0.223 Sum_probs=95.4
Q ss_pred eeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC-CCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS-DKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 350 i~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~-d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
+.+++.+|-++| + . ...++++...+..++..++. +-++-++.|+.. ....|+++...
T Consensus 6 ~div~vlD~SgS---------m---~----~~~~~~~k~~~~~~~~~l~~~~~~v~vv~f~~~-----~~~~~~l~~~~- 63 (194)
T 1mf7_A 6 SDIAFLIDGSGS---------I---I----PHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEE-----FRIHFTFKEFQ- 63 (194)
T ss_dssp EEEEEEEECCTT---------S---C----HHHHHHHHHHHHHHHHHHCCTTEEEEEEEESSS-----EEEEECHHHHH-
T ss_pred eeEEEEEeCCCC---------C---C----HHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCC-----ceEEEecCCcC-
Confidence 788999999885 2 1 13567777777777777763 446889999875 23346654310
Q ss_pred CCcccCHHHHHHHHHhhhcceee-cCCCCcHHHHHHHHHHH-HhhccccCCceEEEEEEeCCccc-CHHHHHHHHHHccC
Q 008558 429 YCEVEGIPGIMMAYTSALHNVNL-AGPTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASD 505 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~~-~gpt~f~~ii~~~~~~a-~~~~~~~~~~y~vlliltdg~i~-d~~~t~~~i~~as~ 505 (561)
+. +. ..+.+..+.. .|.|+...-|+.|.+.. ..........-.++++||||..+ |.....+++.++..
T Consensus 64 ~~-----~~----~~~~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~ 134 (194)
T 1mf7_A 64 NN-----PN----PRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADR 134 (194)
T ss_dssp HS-----CC----HHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHH
T ss_pred CH-----HH----HHHHHHhCcCCCCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHH
Confidence 00 11 1344566664 89999999999888632 21111123356899999999887 65433333344445
Q ss_pred CCeEEEEEeecCCC-----chhhhhcccC
Q 008558 506 LPLSILIIGVGGAD-----FKEMEILDAD 529 (561)
Q Consensus 506 ~p~siiivGvG~~~-----f~~m~~ld~d 529 (561)
..+.|..||||+.. ...|+.+-+.
T Consensus 135 ~gi~v~~igvG~~~~~~~~~~~L~~iA~~ 163 (194)
T 1mf7_A 135 EGVIRYVIGVGDAFRSEKSRQELNTIASK 163 (194)
T ss_dssp TTEEEEEEEESGGGCSHHHHHHHHHHSCS
T ss_pred CCCEEEEEEecccccccccHHHHHHHhCC
Confidence 68999999999863 5677777643
No 104
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=97.70 E-value=6e-05 Score=70.67 Aligned_cols=149 Identities=21% Similarity=0.260 Sum_probs=95.3
Q ss_pred eeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc-cCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY-DSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 350 i~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~y-d~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
+.+++.+|-++| + . ...++.+...+-.++..+ ..+-++-++.|+.. ....|+++....
T Consensus 10 ~div~vlD~SgS---------M---~----~~~~~~~~~~~~~~~~~l~~~~~~v~lv~f~~~-----~~~~~~~~~~~~ 68 (198)
T 1n3y_A 10 QDIVFLIDGSGS---------I---S----SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEFRR 68 (198)
T ss_dssp EEEEEEEECCTT---------S---C----HHHHHHHHHHHHHHHTTSCTTTEEEEEEEESSS-----EEEEECHHHHHH
T ss_pred eeEEEEEECCCC---------C---C----HHHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCC-----ccEEEecCccCC
Confidence 789999999885 2 1 124566677777777777 46777899999876 223355432100
Q ss_pred CCcccCHHHHHHHHHhhhccee-ecCCCCcHHHHHHHHHH-HHhhccccCCceEEEEEEeCCccc-CHHHHHHHHHHccC
Q 008558 429 YCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALI-AGQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASD 505 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~-~~gpt~f~~ii~~~~~~-a~~~~~~~~~~y~vlliltdg~i~-d~~~t~~~i~~as~ 505 (561)
. +...+.+..+. ..|.|++..-|+.+.+. ...........-.++++||||..+ |.....+++..+..
T Consensus 69 ~----------~~~~~~i~~l~~~~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~ 138 (198)
T 1n3y_A 69 S----------SNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADA 138 (198)
T ss_dssp C----------SSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHH
T ss_pred H----------HHHHHHHhcCcCCCCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHH
Confidence 0 11224455554 67899999999988843 222111123456799999999887 54333444444556
Q ss_pred CCeEEEEEeecCCC-----chhhhhcccC
Q 008558 506 LPLSILIIGVGGAD-----FKEMEILDAD 529 (561)
Q Consensus 506 ~p~siiivGvG~~~-----f~~m~~ld~d 529 (561)
..+.|..||||... ...|+.+-+.
T Consensus 139 ~gi~i~~igvG~~~~~~~~~~~L~~iA~~ 167 (198)
T 1n3y_A 139 AGIIRYAIGVGLAFQNRNSWKELNDIASK 167 (198)
T ss_dssp TTCEEEEEEESGGGGSSTTHHHHHHHSCS
T ss_pred CCCEEEEEEccccccccccHHHHHHHHcC
Confidence 68899999999864 6777777643
No 105
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=97.61 E-value=0.00028 Score=67.24 Aligned_cols=155 Identities=14% Similarity=0.202 Sum_probs=98.7
Q ss_pred ceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhh---cccccCCCCcceeeecccCCCCCceeEEeC
Q 008558 347 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEV---LQVYDSDKRFPAWGFGARPIDGPVSHCFNL 423 (561)
Q Consensus 347 G~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~i---l~~yd~d~~~p~~GfG~~~~~~~~~~~f~l 423 (561)
...+++++.||-++| + .. ..++.+...+..+ +..++..-++-++.|+.. ....|++
T Consensus 13 ~~~~div~vlD~SgS---------M---~~----~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~-----~~~~~~~ 71 (223)
T 1q0p_A 13 SGSMNIYLVLDGSDS---------I---GA----SNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKV 71 (223)
T ss_dssp --CEEEEEEEECSTT---------T---CH----HHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSS-----EEEEECT
T ss_pred CCceeEEEEEeCCCC---------C---ch----HHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCc-----cceeecc
Confidence 345788999999985 2 11 2345555555555 445555567999999875 1223544
Q ss_pred CCCCCCCcccCHHHHHHHHHhhhccee-----ecCCCCcHHHHHHHHHHHHhhcccc----CCceEEEEEEeCCccc---
Q 008558 424 NGSNSYCEVEGIPGIMMAYTSALHNVN-----LAGPTLFGPVISNAALIAGQSLANH----GQKYFVLLIITDGVVT--- 491 (561)
Q Consensus 424 ~~~~~~~~~~g~~~v~~~Y~~~~~~~~-----~~gpt~f~~ii~~~~~~a~~~~~~~----~~~y~vlliltdg~i~--- 491 (561)
+ .|.-...+.+. +.+..+. ..|.|++..-|+.|.+......... ...-.++++||||..+
T Consensus 72 ~----~~~~~~~~~~~----~~i~~l~~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~ 143 (223)
T 1q0p_A 72 S----EADSSNADWVT----KQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGG 143 (223)
T ss_dssp T----SGGGGCHHHHH----HHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSS
T ss_pred c----cCCCCCHHHHH----HHHHhcccccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCC
Confidence 3 23333334444 3344444 4689999999999998765331111 2456789999999987
Q ss_pred CHHHHHHHHHHc----------cCCCeEEEEEeecC-CCchhhhhcccCC
Q 008558 492 DLQETKDALVKA----------SDLPLSILIIGVGG-ADFKEMEILDADK 530 (561)
Q Consensus 492 d~~~t~~~i~~a----------s~~p~siiivGvG~-~~f~~m~~ld~d~ 530 (561)
|.....+.+.+. ....+-|..||||. .+...|+.|-+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L~~iA~~~ 193 (223)
T 1q0p_A 144 DPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKK 193 (223)
T ss_dssp CTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHHHHHSCCC
T ss_pred ChHHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHHHHHhcCC
Confidence 666666666442 34578899999996 5778888887543
No 106
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=97.61 E-value=0.001 Score=63.67 Aligned_cols=137 Identities=21% Similarity=0.280 Sum_probs=91.8
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~~ 425 (561)
.+.+++.+|-+.| +. .++++...+..++..++ .+-++-++.|+.. +..-|+++.
T Consensus 22 ~~div~vlD~SgS---------M~---------~~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~-----~~~~~~l~~ 78 (223)
T 2b2x_A 22 QLDIVIVLDGSNS---------IY---------PWESVIAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLNK 78 (223)
T ss_dssp CEEEEEEEECSTT---------CC---------CHHHHHHHHHHHHTTSCCSTTSCCEEEEEESSS-----EEEEECTTT
T ss_pred cceEEEEEECCCC---------hh---------hHHHHHHHHHHHHHhcccCCCCeEEEEEEeCCC-----ccEEEecCC
Confidence 3889999999885 21 16777777777877775 4667999999875 233567732
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cC-CCCcHHHHHHHHHHHHh-hccccCCceEEEEEEeCCcccCHHHHHHHHHH
Q 008558 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVK 502 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~~~~~-~g-pt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~ 502 (561)
. ...+.++ +.+..+.. .| .|+...-|+.|.+.... ........-.++++||||.-+|-....+++-.
T Consensus 79 -~-----~~~~~~~----~~i~~l~~~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~ 148 (223)
T 2b2x_A 79 -Y-----SSTEEVL----VAANKIVQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQD 148 (223)
T ss_dssp -C-----CSHHHHH----HHHTTCCCCCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGGGHHHHHHH
T ss_pred -C-----CCHHHHH----HHHHhhhccCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 1 2233433 44555554 45 49999999988874211 11112345678999999998876555555555
Q ss_pred ccCCCeEEEEEeecCC
Q 008558 503 ASDLPLSILIIGVGGA 518 (561)
Q Consensus 503 as~~p~siiivGvG~~ 518 (561)
+....+.|..||||..
T Consensus 149 ~~~~gi~v~~igvG~~ 164 (223)
T 2b2x_A 149 CEDENIQRFSIAILGH 164 (223)
T ss_dssp HHTTTEEEEEEEECGG
T ss_pred HHHCCCEEEEEEecCc
Confidence 6677899999999964
No 107
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=97.58 E-value=0.00031 Score=66.41 Aligned_cols=147 Identities=10% Similarity=0.126 Sum_probs=96.2
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~~ 425 (561)
.+.+++.||-+.| + . ...++++...+..++..++ .+-++-+..|+.. ...-|+|+.
T Consensus 13 ~~divfvlD~SgS---------m---~----~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~~ 71 (202)
T 1ijb_A 13 LLDLVFLLDGSSR---------L---S----EAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDG-----SHAYIGLKD 71 (202)
T ss_dssp CEEEEEEEECBTT---------S---C----HHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred cccEEEEEECCCC---------C---C----HHHHHHHHHHHHHHHHhcccCCCceEEEEEEECCC-----ceEEEecCC
Confidence 4899999999885 2 2 2457788888888888887 3347888888765 233467653
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceeec-CC-CCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCH--HHHHHHHH
Q 008558 426 SNSYCEVEGIPGIMMAYTSALHNVNLA-GP-TLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL--QETKDALV 501 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~~~~~~-gp-t~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~--~~t~~~i~ 501 (561)
. . ..+.+ .+.+..+... |. |+...-|+.|.+..-.. ......-.++++||||.-+|- +...+++.
T Consensus 72 ~-~-----~~~~~----~~~i~~l~~~gg~~T~~~~aL~~a~~~~~~~-~~r~~~~~~iillTDG~~~~~~~~~~~~~a~ 140 (202)
T 1ijb_A 72 R-K-----RPSEL----RRIASQVKYAGSQVASTSEVLKYTLFQIFSK-IDRPEASRIALLLMASQEPQRMSRNFVRYVQ 140 (202)
T ss_dssp C-C-----CHHHH----HHHHHTCCCCCBSCCCHHHHHHHHHHHTSSS-CSCTTSEEEEEEEECCCCCGGGCTTHHHHHH
T ss_pred C-C-----CHHHH----HHHHHhCcCCCCCcCcHHHHHHHHHHHHhcc-CCCCCCCeEEEEEccCCCCccchHHHHHHHH
Confidence 1 1 12333 3345555554 43 99999999887532111 012234579999999987642 23444444
Q ss_pred HccCCCeEEEEEeecC-CCchhhhhcc
Q 008558 502 KASDLPLSILIIGVGG-ADFKEMEILD 527 (561)
Q Consensus 502 ~as~~p~siiivGvG~-~~f~~m~~ld 527 (561)
.+-...+.|..||||+ .+...|+.+-
T Consensus 141 ~l~~~gi~i~~igvG~~~~~~~L~~iA 167 (202)
T 1ijb_A 141 GLKKKKVIVIPVGIGPHANLKQIRLIE 167 (202)
T ss_dssp HHHHTTEEEEEEEESTTSCHHHHHHHH
T ss_pred HHHHCCCEEEEEecCCcCCHHHHHHHh
Confidence 4445689999999996 5778888775
No 108
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=97.54 E-value=0.0017 Score=61.09 Aligned_cols=148 Identities=15% Similarity=0.151 Sum_probs=98.5
Q ss_pred eEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEeCCCCC
Q 008558 351 NFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFNLNGSN 427 (561)
Q Consensus 351 ~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~y---d~d~~~p~~GfG~~~~~~~~~~~f~l~~~~ 427 (561)
.++++||-+. |+..-+- .+|..+.|..++..++..| .+.-++-+..|++.-.. ---|++.+
T Consensus 4 ~lvlvlD~S~---------SM~~~D~--~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~----~~~plT~d- 67 (192)
T 2x5n_A 4 ATMILIDNSE---------WMINGDY--IPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ----VLSTLTRD- 67 (192)
T ss_dssp EEEEEECCSG---------GGGCTTS--SSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCC----EEEEEESC-
T ss_pred EEEEEEECCH---------hhccCCC--CCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcE----EecCCCCC-
Confidence 4789999988 4544442 3789999988887766554 34557888888773111 11255543
Q ss_pred CCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCce-EEEEEEeCCcccCHHHHHHHHHHccCC
Q 008558 428 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKY-FVLLIITDGVVTDLQETKDALVKASDL 506 (561)
Q Consensus 428 ~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y-~vlliltdg~i~d~~~t~~~i~~as~~ 506 (561)
.++-.+.|..+.+.|.|.+..-|..|.+..++.. ..... -|+|+++|+.-.|..+..+++-.+.+.
T Consensus 68 -----------~~~i~~~L~~l~~~g~t~l~~aL~~A~~~l~~~~--~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~ 134 (192)
T 2x5n_A 68 -----------YGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRE--NKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKN 134 (192)
T ss_dssp -----------HHHHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHT
T ss_pred -----------HHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhcc--ccCCCceEEEEEECCCCCCchhHHHHHHHHHHC
Confidence 3344566677889999999999999998776542 11233 355555555445667777777777788
Q ss_pred CeEEEEEeecCCCchh-hhhcc
Q 008558 507 PLSILIIGVGGADFKE-MEILD 527 (561)
Q Consensus 507 p~siiivGvG~~~f~~-m~~ld 527 (561)
.+.|.+||+|..+... |+.|-
T Consensus 135 gi~v~~Ig~G~~~~~~~l~~la 156 (192)
T 2x5n_A 135 NVAIDIIHIGELQNESALQHFI 156 (192)
T ss_dssp TEEEEEEEESCC---CHHHHHH
T ss_pred CCEEEEEEeCCCCccHHHHHHH
Confidence 9999999999875421 77775
No 109
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=97.54 E-value=0.0011 Score=71.12 Aligned_cols=155 Identities=15% Similarity=0.109 Sum_probs=108.1
Q ss_pred ceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCC
Q 008558 347 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (561)
Q Consensus 347 G~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~ 426 (561)
+..+++++.||.++| +. .+ .+..+.|..++..++.....+-++-++.|+.. ...+||++..
T Consensus 75 ~~~~dvv~VLD~SGS---------M~--~~---~~rl~~ak~a~~~ll~~L~~~drv~lV~Fs~~-----a~~~~p~t~~ 135 (464)
T 4fx5_A 75 GSENVEVIIIDCSGS---------MD--YP---RTKMMAAKEATKVAIDTLTDGAFFAVVAGTEG-----ARVVYPTGGQ 135 (464)
T ss_dssp -CCEEEEEEEECCGG---------GG--TT---THHHHHHHHHHHHHHHHSCTTCEEEEEEESSS-----EEEEESSSSS
T ss_pred CCCceEEEEEEcCcc---------cC--CC---CchHHHHHHHHHHHHHhCCCCCEEEEEEEcCc-----eEEEecCCcc
Confidence 567999999999995 32 11 36678888888888887877778999999875 3345665421
Q ss_pred CCCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCH-HHHHHHHHHccC
Q 008558 427 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-QETKDALVKASD 505 (561)
Q Consensus 427 ~~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~-~~t~~~i~~as~ 505 (561)
.... . ..=.+.-++.+..+...|.|++..-|+.+.+..... ...-.++++||||..++- .+.+....++..
T Consensus 136 l~~~---~-~~~~~~l~~~I~~L~~~GgT~l~~aL~~A~~~l~~~----~~~~~~IILLTDG~~~~~~~~~l~~~~~a~~ 207 (464)
T 4fx5_A 136 LLRA---D-YQSRAAAKEAVGRLHANGGTAMGRWLAQAGRIFDTA----PSAIKHAILLTDGKDESETPADLARAIQSSI 207 (464)
T ss_dssp CEEC---S-HHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHTTC----TTSEEEEEEEESSCCTTSCHHHHHHHHHHHT
T ss_pred cccC---C-HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhcC----CCCCCEEEEEcCCCCCCCChHHHHHHHHHhc
Confidence 1001 1 122344456677888999999999999998876532 234578999999998643 344555556667
Q ss_pred CCeEEEEEeecCC-Cchhhhhccc
Q 008558 506 LPLSILIIGVGGA-DFKEMEILDA 528 (561)
Q Consensus 506 ~p~siiivGvG~~-~f~~m~~ld~ 528 (561)
..+.|..||+|.. +...|+.|-.
T Consensus 208 ~~i~i~tiGiG~~~d~~~L~~IA~ 231 (464)
T 4fx5_A 208 GNFTADCRGIGEDWEPKELRKIAD 231 (464)
T ss_dssp TTCEEEEEEESSSSCHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCHHHHHHHHH
Confidence 8899999999954 7787877753
No 110
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=97.41 E-value=0.0009 Score=62.91 Aligned_cols=134 Identities=17% Similarity=0.132 Sum_probs=89.5
Q ss_pred eeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCCC
Q 008558 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (561)
Q Consensus 350 i~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~~~ 426 (561)
+.+++.+|-+.| + . .++++...+..++..++ .+-++-++.|+.. ...-|+|+.
T Consensus 7 ~div~vlD~SgS---------m---~------~~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~-----~~~~~~l~~- 62 (200)
T 1v7p_C 7 IDVVVVCDESNS---------I---Y------PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANN-----PRVVFNLNT- 62 (200)
T ss_dssp EEEEEEEECCTT---------C---C------CHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSS-----EEEEECTTT-
T ss_pred ccEEEEEECCCC---------c---c------cHHHHHHHHHHHHHhcCCCCCceEEEEEEECCC-----ceEEEeCCC-
Confidence 788999999885 2 1 15777777778887776 4567888889875 233577762
Q ss_pred CCCCcccCHHHHHHHHHhhhcceeec-C-CCCcHHHHHHHHHHH-HhhccccCCceEEEEEEeCCcccCHHHHHHHHHHc
Q 008558 427 NSYCEVEGIPGIMMAYTSALHNVNLA-G-PTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVTDLQETKDALVKA 503 (561)
Q Consensus 427 ~~~~~~~g~~~v~~~Y~~~~~~~~~~-g-pt~f~~ii~~~~~~a-~~~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~a 503 (561)
. ...+.+++ .+..+... | .|+...-|+.|.+.. ..........-.++++||||.-+|-....+++..+
T Consensus 63 ~-----~~~~~~~~----~i~~l~~~~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~~ 133 (200)
T 1v7p_C 63 Y-----KTKEEMIV----ATSQTSQYGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQC 133 (200)
T ss_dssp C-----SSHHHHHH----HHHHCCCCCCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGGGHHHHHHHH
T ss_pred c-----CCHHHHHH----HHHhhhccCCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcccHHHHHHHH
Confidence 1 23344443 34455554 5 599999999988742 21111123456789999999998865455555555
Q ss_pred cCCCeEEEEEeec
Q 008558 504 SDLPLSILIIGVG 516 (561)
Q Consensus 504 s~~p~siiivGvG 516 (561)
....+.|..||||
T Consensus 134 ~~~gi~i~~igvg 146 (200)
T 1v7p_C 134 NHDNILRFGIAVL 146 (200)
T ss_dssp HHTTEEEEEEEEC
T ss_pred HHCCCEEEEEEec
Confidence 5678999999995
No 111
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=97.40 E-value=0.00094 Score=63.42 Aligned_cols=137 Identities=20% Similarity=0.278 Sum_probs=89.9
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~~ 425 (561)
.+.+++.+|-+.| + . .++.+...+..++..++ .+-++-++.|+.. +..-|+++.
T Consensus 7 ~~div~vlD~SgS---------m---~------~~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~-----~~~~~~l~~ 63 (213)
T 1pt6_A 7 QLDIVIVLDGSNS---------I---Y------PWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLNK 63 (213)
T ss_dssp CEEEEEEEECCTT---------C---C------CHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSS-----EEEEECTTT
T ss_pred CccEEEEEECCCC---------h---h------hHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCC-----ccEEEeccc
Confidence 3788999999885 2 1 15666667777777665 5667889999875 233467632
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cC-CCCcHHHHHHHHHHH-HhhccccCCceEEEEEEeCCcccCHHHHHHHHHH
Q 008558 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVTDLQETKDALVK 502 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~~~~~-~g-pt~f~~ii~~~~~~a-~~~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~ 502 (561)
. ...+.++ +.+..+.. .| .|+...-|+.|.+.. ..........-.++++||||.-+|-....+++-.
T Consensus 64 -~-----~~~~~~~----~~i~~l~~~~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~ 133 (213)
T 1pt6_A 64 -Y-----SSTEEVL----VAAKKIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQD 133 (213)
T ss_dssp -C-----SSHHHHH----HHHHTCCCCCCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCSHHHHHHHHH
T ss_pred -c-----CCHHHHH----HHHHhccCCCCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 1 2234444 34445554 45 499999999888642 1111112345788999999998876555555555
Q ss_pred ccCCCeEEEEEeecCC
Q 008558 503 ASDLPLSILIIGVGGA 518 (561)
Q Consensus 503 as~~p~siiivGvG~~ 518 (561)
+....+.|..||||..
T Consensus 134 ~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 134 CEDENIQRFSIAILGS 149 (213)
T ss_dssp HHHTTEEEEEEEECHH
T ss_pred HHHCCCEEEEEEeccc
Confidence 5667899999999964
No 112
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=97.32 E-value=0.0008 Score=62.59 Aligned_cols=147 Identities=13% Similarity=0.183 Sum_probs=95.8
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEeCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLNG 425 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~---d~~~p~~GfG~~~~~~~~~~~f~l~~ 425 (561)
.+.+++.+|-++| + . .+.++++...+..++..++. .-++-++.|+.. +..-|+++.
T Consensus 5 ~~div~vlD~SgS---------m---~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~-----~~~~~~l~~ 63 (189)
T 1atz_A 5 PLDVILLLDGSSS---------F---P----ASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSI-----TTIDVPWNV 63 (189)
T ss_dssp CEEEEEEEECSSS---------S---C----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred ceeEEEEEeCCCC---------C---C----hhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCc-----ceEEEecCC
Confidence 4788999999885 2 2 15577777777777777752 246888899765 233467642
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cCCCCcHHHHHHHHHHHHhhcc-ccCCceEEEEEEeCCccc-CHHHHHHHHHH
Q 008558 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AGPTLFGPVISNAALIAGQSLA-NHGQKYFVLLIITDGVVT-DLQETKDALVK 502 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~~~~~-~gpt~f~~ii~~~~~~a~~~~~-~~~~~y~vlliltdg~i~-d~~~t~~~i~~ 502 (561)
. ...+.+.++ +..+.. .|.|+...-|+.|.+....... .....-.+++|||||..+ |..+..+.+.
T Consensus 64 ~------~~~~~~~~~----i~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~~~~~~~~~~- 132 (189)
T 1atz_A 64 V------PEKAHLLSL----VDVMQREGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDSVDAAADAAR- 132 (189)
T ss_dssp C------CCHHHHHHH----HHTCCCCCCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSCCHHHHHHHH-
T ss_pred C------CCHHHHHHH----HHhCcCCCCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCchHHHHHHHHH-
Confidence 1 123444433 344443 6889999999999986654311 122345678888888664 4445444444
Q ss_pred ccCCCeEEEEEeecC-CCchhhhhcccC
Q 008558 503 ASDLPLSILIIGVGG-ADFKEMEILDAD 529 (561)
Q Consensus 503 as~~p~siiivGvG~-~~f~~m~~ld~d 529 (561)
...+.|..||||+ .+-..|+.+-+.
T Consensus 133 --~~gi~v~~igvG~~~~~~~L~~iA~~ 158 (189)
T 1atz_A 133 --SNRVTVFPIGIGDRYDAAQLRILAGP 158 (189)
T ss_dssp --HTTEEEEEEEESSSSCHHHHHHHTGG
T ss_pred --HCCCEEEEEEcCCcCCHHHHHHHHCC
Confidence 4688999999998 577778777643
No 113
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=97.19 E-value=0.0026 Score=68.72 Aligned_cols=156 Identities=17% Similarity=0.212 Sum_probs=103.7
Q ss_pred cceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEe
Q 008558 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFN 422 (561)
Q Consensus 346 gG~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~y---d~d~~~p~~GfG~~~~~~~~~~~f~ 422 (561)
....+++++.||-+.| + . ...+++|..++..+++.+ ..+-++-+..|+.. ...-|+
T Consensus 6 ~~~~~divfvlD~SgS---------M---~----~~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 64 (509)
T 2odp_A 6 RSGHLNLYLLLDASQS---------V---S----ENDFLIFKESASLMVDRIFSFEINVSVAIITFASE-----PKVLMS 64 (509)
T ss_dssp SSSEEEEEEEEECSTT---------S---C----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEESSS-----EEEEEC
T ss_pred CCCCeeEEEEEeCCCc---------c---c----hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccCC-----CceeEe
Confidence 4557899999999885 2 2 135677777777777665 56677889999775 223466
Q ss_pred CCCCCCCCcccCHHHHHHHHHhhhcceeec-----CCCCcHHHHHHHHHHHHhhcccc-------CCceEEEEEEeCCcc
Q 008558 423 LNGSNSYCEVEGIPGIMMAYTSALHNVNLA-----GPTLFGPVISNAALIAGQSLANH-------GQKYFVLLIITDGVV 490 (561)
Q Consensus 423 l~~~~~~~~~~g~~~v~~~Y~~~~~~~~~~-----gpt~f~~ii~~~~~~a~~~~~~~-------~~~y~vlliltdg~i 490 (561)
+.. +.-...+.++ +.+..++.. |.|+...-|+.|.+..+...... ...-.++++||||.-
T Consensus 65 l~~----~~~~~~~~~~----~~l~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~ 136 (509)
T 2odp_A 65 VLN----DNSRDMTEVI----SSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKS 136 (509)
T ss_dssp TTS----GGGGCHHHHH----HHHHTCCGGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCC
T ss_pred ccC----CCCCCHHHHH----HHHHhcccccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCc
Confidence 532 2222334443 445555554 78999999999998664432111 123478999999977
Q ss_pred cC---HHHHHHHHHHc------cCCCeEEEEEeecC--CCchhhhhcccCC
Q 008558 491 TD---LQETKDALVKA------SDLPLSILIIGVGG--ADFKEMEILDADK 530 (561)
Q Consensus 491 ~d---~~~t~~~i~~a------s~~p~siiivGvG~--~~f~~m~~ld~d~ 530 (561)
++ ..+..+.+.+. .+..+.|..||||+ .+...|+.|-+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~iA~~~ 187 (509)
T 2odp_A 137 NMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKK 187 (509)
T ss_dssp CSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHHHSCCC
T ss_pred cCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHhhccCC
Confidence 64 45555555532 25678899999998 6899998887543
No 114
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=97.10 E-value=8.3e-05 Score=69.29 Aligned_cols=145 Identities=14% Similarity=0.085 Sum_probs=88.9
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc-ccCCCCcceeeecccCCCCCceeEEeCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV-YDSDKRFPAWGFGARPIDGPVSHCFNLNGSN 427 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~-yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~~ 427 (561)
..++++.||-++| +. . +..+.|..++..++.. +...-++-++.|+...... .+|+.
T Consensus 5 ~~~vv~vlD~SgS---------M~---~----~~~~~~k~~~~~~~~~~~~~~~~v~lv~f~~~~~~~----~~~~~--- 61 (189)
T 2x31_A 5 DRVLIFAVDASGS---------AA---V----ARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQV----LLQPS--- 61 (189)
T ss_dssp CCEEEEEEECCTT---------SC---C------CHHHHHHHHHHHHHSCTTTSCCCEEEESBSCCCB----CTTTC---
T ss_pred CeEEEEEEECCCC---------CC---c----hHHHHHHHHHHHHHHHhcCCCcEEEEEEECCCCceE----ecCCC---
Confidence 3678899999995 31 1 2334444444444433 3566679999998631111 12221
Q ss_pred CCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccCH-----------HHH
Q 008558 428 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-----------QET 496 (561)
Q Consensus 428 ~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d~-----------~~t 496 (561)
...+. ..+.+..+...|.|++.+-|+.+.+...+.. ....-.++++||||..++- ++.
T Consensus 62 -----~~~~~----~~~~i~~l~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~ 130 (189)
T 2x31_A 62 -----RSLTQ----TKRQLQGLPGGGGTPLASGMEMAMVTAKQAR--SRGMTPTIALLTDGRGNIALDGTANRELAGEQA 130 (189)
T ss_dssp -----SCHHH----HHHHHHHCCCCBCCCCHHHHHHHHHHHHTCT--TTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCC
T ss_pred -----CCHHH----HHHHHhcCCCCCCCCHHHHHHHHHHHHHhcc--CCCCceEEEEECCCCCCCCCCccccccchhHHH
Confidence 12333 3455666778999999999999998877542 1234568999999987642 111
Q ss_pred HHHHHHccCCCeEEEEEeecCCCchhhhhcc
Q 008558 497 KDALVKASDLPLSILIIGVGGADFKEMEILD 527 (561)
Q Consensus 497 ~~~i~~as~~p~siiivGvG~~~f~~m~~ld 527 (561)
.+++..+....+.|+.||+|..+...|+.|-
T Consensus 131 ~~~~~~~~~~gi~v~~ig~g~~~~~~L~~iA 161 (189)
T 2x31_A 131 TKVARAIRASGMPAVIIDTAMRPNPALVDLA 161 (189)
T ss_dssp EEEEECTGGGGSCCTHHHHHHSSCSSSCSTT
T ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 1222223345678888999988666666665
No 115
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.011 Score=58.42 Aligned_cols=147 Identities=10% Similarity=0.075 Sum_probs=99.7
Q ss_pred EEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 352 FMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 352 ~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~y---d~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
.++.||-+.|= ---+ ..+|.++.+..++-.++..+ ++.-++-+..|++..+. + --+++.+
T Consensus 6 tViviD~S~SM---------~~~D--~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~--v--l~plT~D-- 68 (268)
T 4b4t_W 6 TVLVIDNSEYS---------RNGD--FPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR--V--LSTFTAE-- 68 (268)
T ss_dssp EEEEECCSSTT---------SSTT--SSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCE--E--EEEEESC--
T ss_pred EEEEEECCHHH---------hCCC--CCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcce--e--ccCCcch--
Confidence 57889988852 1111 24688888888877777644 45567888888654110 0 1133332
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCccc-CHHHHHHHHHHccCCC
Q 008558 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASDLP 507 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~-d~~~t~~~i~~as~~p 507 (561)
.. .-..+|..+++.|-|++..-|+.|...++... .+..-..++|+|||.+. |-++.++++.++.+.-
T Consensus 69 ------~~----~il~aL~~l~~~G~T~l~~gL~~A~~aLk~~~--~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~g 136 (268)
T 4b4t_W 69 ------FG----KILAGLHDTQIEGKLHMATALQIAQLTLKHRQ--NKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNN 136 (268)
T ss_dssp ------HH----HHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHT
T ss_pred ------HH----HHHHHhhhcCcCCCCChHHHHHHHHHHHHhcc--cCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 12 23466788999999999999999999887653 34455567788888764 5566777777777777
Q ss_pred eEEEEEeecC--CCchhhhhcc
Q 008558 508 LSILIIGVGG--ADFKEMEILD 527 (561)
Q Consensus 508 ~siiivGvG~--~~f~~m~~ld 527 (561)
++|=|||+|. .+-..|+.|-
T Consensus 137 I~v~vIgFG~~~~n~~kLe~l~ 158 (268)
T 4b4t_W 137 VAVDIINFGEIEQNTELLDEFI 158 (268)
T ss_dssp EEEEEEEESSCCSSCCHHHHHH
T ss_pred CEEEEEEeCCCccchHHHHHHH
Confidence 7777788775 4667787774
No 116
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=96.95 E-value=0.006 Score=52.76 Aligned_cols=69 Identities=20% Similarity=0.224 Sum_probs=49.0
Q ss_pred CCCceEEEEEEcCCCceeeEEEc-eeecCCCCCceec-ceeeeeecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHh
Q 008558 221 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 298 (561)
Q Consensus 221 ~sDPy~~i~~~~~~g~~~~~~kT-evik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~ 298 (561)
..|||+.+..... .....-+| -..++|..|.|++ |...+. ..+.|.|.|++-.. +++..|++.+.+|.
T Consensus 26 ~lDPy~aV~vdE~--~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a~----~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 26 ANQPFCAVKMKEA--LSTERGKTLVQKKPTMYPEWKSTFDAHIY----EGRVIQIVLMRAAE----EPVSEVTVGVSVLA 95 (126)
T ss_dssp SCCCEEEEEEEEE--EEETTEEEEECCSCCBCCCTTCEEEEECC----TTCEEEEEEEEETT----EEEEEEEEEHHHHH
T ss_pred cCCceEEEEeeee--EEcccceeecccCCCCCcCccceEEeeee----CCEEEEEEEEcCCC----CeeeEEEEEHHHHH
Confidence 5799998877430 00011254 6667899999997 554432 36899999995332 99999999999997
Q ss_pred h
Q 008558 299 K 299 (561)
Q Consensus 299 ~ 299 (561)
+
T Consensus 96 ~ 96 (126)
T 1yrk_A 96 E 96 (126)
T ss_dssp H
T ss_pred h
Confidence 4
No 117
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=96.85 E-value=0.0013 Score=61.93 Aligned_cols=143 Identities=16% Similarity=0.211 Sum_probs=91.6
Q ss_pred eeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCC
Q 008558 348 FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 424 (561)
Q Consensus 348 ~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~l~ 424 (561)
..+++++.||-+.| + . ...++++...+-.++..++ ..-++-+..|+.. +...|+|+
T Consensus 20 ~~~DivfvlD~S~S---------m---~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~ 78 (199)
T 3zqk_A 20 MVLDVAFVLEGSDK---------I---G----EADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYM-----VTVEYPFS 78 (199)
T ss_dssp CCCEEEEEEECCTT---------T---C----HHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSS-----EEEEECTT
T ss_pred CCcCEEEEEECCCC---------C---C----HHHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCc-----ccEEEecC
Confidence 34788999998874 2 2 2456777777778888775 4556888888765 34457776
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceee-cCC-CCcHHHHHHHHHHHHh-hccccCCceEEEEEEeCCcccCHHHHHHHHH
Q 008558 425 GSNSYCEVEGIPGIMMAYTSALHNVNL-AGP-TLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALV 501 (561)
Q Consensus 425 ~~~~~~~~~g~~~v~~~Y~~~~~~~~~-~gp-t~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdg~i~d~~~t~~~i~ 501 (561)
. ....+.++++ +..++. .|+ |+...-|+.+.+.... ........-.++++||||...|--+
T Consensus 79 ~------~~~~~~~~~~----i~~l~~~gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v~------ 142 (199)
T 3zqk_A 79 E------AQSKGDILQR----LREIRYQGGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEIK------ 142 (199)
T ss_dssp S------CCCHHHHHHH----HHHCCCCCCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCCC------
T ss_pred C------cCCHHHHHHH----HHhCcCCCCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHHH------
Confidence 3 1223444444 344444 354 9988888877653211 1111223447899999998765311
Q ss_pred HccCCCeEEEEEeec-CCCchhhhhccc
Q 008558 502 KASDLPLSILIIGVG-GADFKEMEILDA 528 (561)
Q Consensus 502 ~as~~p~siiivGvG-~~~f~~m~~ld~ 528 (561)
++ ...+.|.-|||| +.+...|+.+-+
T Consensus 143 ~~-~~~v~v~~iGiG~~~~~~~L~~iA~ 169 (199)
T 3zqk_A 143 RL-PGDIQVVPIGVGPNANVQELERIGW 169 (199)
T ss_dssp CC-CTTEEEEEEEESTTCCHHHHHHHHT
T ss_pred HH-hCCCEEEEEEcCCCCCHHHHHHHhC
Confidence 11 257889999999 678888888874
No 118
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=96.84 E-value=0.0062 Score=53.39 Aligned_cols=69 Identities=20% Similarity=0.179 Sum_probs=48.8
Q ss_pred CCCceEEEEEEcCCCceeeEEEc-eeecCCCCCceec-ceeeeeecCCCCccEEEEEEeccCCCCCceeEEEEEehhhHh
Q 008558 221 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 298 (561)
Q Consensus 221 ~sDPy~~i~~~~~~g~~~~~~kT-evik~tlnP~W~e-f~~~~~~l~d~~~~L~ieV~D~d~~g~~d~IG~~~i~l~~l~ 298 (561)
..|||+.+..... .....-+| -..++|..|.|++ |...+. ..+.|.|.|++-.. +++..|++.+.+|.
T Consensus 31 ~lDPY~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a~----~fVAn~tV~~edL~ 100 (138)
T 2enj_A 31 AVNPYCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHIN----KGRVMQIIVKGKNV----DLISETTVELYSLA 100 (138)
T ss_dssp CCCCEEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCC----SSCEEEEEEECSSC----SCCEEEEEESHHHH
T ss_pred cCCceEEEEeeee--eeccCceeecccCCCCCccccceEeeeEE----CCeEEEEEEEcCCC----CeeeEEEEEHHHHH
Confidence 4799998877431 00112456 5566889999997 554432 26899999994322 99999999999997
Q ss_pred h
Q 008558 299 K 299 (561)
Q Consensus 299 ~ 299 (561)
+
T Consensus 101 ~ 101 (138)
T 2enj_A 101 E 101 (138)
T ss_dssp H
T ss_pred h
Confidence 4
No 119
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=96.71 E-value=0.008 Score=67.91 Aligned_cols=155 Identities=13% Similarity=0.187 Sum_probs=100.6
Q ss_pred cceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEe
Q 008558 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFN 422 (561)
Q Consensus 346 gG~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd---~d~~~p~~GfG~~~~~~~~~~~f~ 422 (561)
.+..+++++.||-+.| + . ...+++|..++..+++.++ ..-+|-+.-|+.. +..-|+
T Consensus 240 ~~~~~div~vlD~SgS---------M---~----~~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 298 (741)
T 3hrz_D 240 PSGSMNIYLVLDGSGS---------I---G----ASDFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVK 298 (741)
T ss_dssp TTCEEEEEEEEECSTT---------T---C----HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEEC
T ss_pred CCCceeEEEEeccCCc---------c---c----ccchHHHHHHHHHHHHhhhccCCCceEEEEEeccC-----CceeEe
Confidence 4557899999998885 2 2 1345666666666655544 4456888888764 233466
Q ss_pred CCCCCCCCcccCHHHHHHHHHhhhccee-----ecCCCCcHHHHHHHHHHHHhhc----cccCCceEEEEEEeCCccc--
Q 008558 423 LNGSNSYCEVEGIPGIMMAYTSALHNVN-----LAGPTLFGPVISNAALIAGQSL----ANHGQKYFVLLIITDGVVT-- 491 (561)
Q Consensus 423 l~~~~~~~~~~g~~~v~~~Y~~~~~~~~-----~~gpt~f~~ii~~~~~~a~~~~----~~~~~~y~vlliltdg~i~-- 491 (561)
|+.. .-...+.++ +++..+. ..|-|+...-|+.|.+...... ......-.++++||||.-+
T Consensus 299 l~~~----~~~~~~~~~----~~i~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g 370 (741)
T 3hrz_D 299 VSEA----DSSNADWVT----KQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMG 370 (741)
T ss_dssp TTSG----GGGCHHHHH----HHHTTCCGGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSS
T ss_pred eccc----CCcCHHHHH----HHHHhcccccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccC
Confidence 6541 112334443 4456666 6889999999999988762110 0112345789999999654
Q ss_pred -CHHHHHHHHHH----------ccCCCeEEEEEeecC-CCchhhhhcccC
Q 008558 492 -DLQETKDALVK----------ASDLPLSILIIGVGG-ADFKEMEILDAD 529 (561)
Q Consensus 492 -d~~~t~~~i~~----------as~~p~siiivGvG~-~~f~~m~~ld~d 529 (561)
|..+..+.|.+ +....+.|..||||+ .+...|+.|-+.
T Consensus 371 ~~p~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L~~ia~~ 420 (741)
T 3hrz_D 371 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASK 420 (741)
T ss_dssp SCTHHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHHHHHSCC
T ss_pred CCchHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHHHHHhcC
Confidence 55666666553 345678999999997 677888887744
No 120
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=96.67 E-value=0.0083 Score=64.36 Aligned_cols=155 Identities=12% Similarity=0.151 Sum_probs=98.8
Q ss_pred eeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCCCceeEEeCCCC
Q 008558 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (561)
Q Consensus 350 i~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~---yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~ 426 (561)
+.+++.+|-+.|= . .+.++.|...+..++.. +..+-++-++-|+.. ....++++
T Consensus 2 ~div~vlD~SgSM------------~----~~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~-----~~~~~~~~-- 58 (497)
T 1rrk_A 2 MNIYLVLDGSDSI------------G----ASNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKVS-- 58 (497)
T ss_dssp EEEEEEEECSTTT------------C----HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEECTT--
T ss_pred eeEEEEEECCCCc------------c----hhhHHHHHHHHHHHHHHhhccCCCceEEEEEecCC-----ceEeeccc--
Confidence 6789999998852 1 14566666666666665 444567889999865 12234442
Q ss_pred CCCCcccCHHHHHHHHHhhhcce-eecCCCCcHHHHHHHHHHHHhhcc----ccCCceEEEEEEeCCccc---CHHHHHH
Q 008558 427 NSYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQSLA----NHGQKYFVLLIITDGVVT---DLQETKD 498 (561)
Q Consensus 427 ~~~~~~~g~~~v~~~Y~~~~~~~-~~~gpt~f~~ii~~~~~~a~~~~~----~~~~~y~vlliltdg~i~---d~~~t~~ 498 (561)
.|.-...+.+.++-...-..- ...|.|+...-|+.|.+....... .....-.++++||||.-+ |..+..+
T Consensus 59 --~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~ 136 (497)
T 1rrk_A 59 --EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVID 136 (497)
T ss_dssp --SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHH
T ss_pred --cccccCHHHHHHHHHhCcCccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHH
Confidence 233444555555443322211 146789999999999887632110 012345789999999876 6666666
Q ss_pred HHHHcc----------CCCeEEEEEeecC-CCchhhhhcccC
Q 008558 499 ALVKAS----------DLPLSILIIGVGG-ADFKEMEILDAD 529 (561)
Q Consensus 499 ~i~~as----------~~p~siiivGvG~-~~f~~m~~ld~d 529 (561)
.+.+.. ...+.|..||||+ .+...|+.|-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L~~iA~~ 178 (497)
T 1rrk_A 137 EIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASK 178 (497)
T ss_dssp HHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHHHHSCC
T ss_pred HHHHHhhhhcccccchhcCeeEEEecCCCccCHHHHHHHhcC
Confidence 665542 2278899999997 578888888744
No 121
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=96.62 E-value=0.0024 Score=58.98 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=86.3
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCC-CcceeeecccCCCCCceeEEeCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDK-RFPAWGFGARPIDGPVSHCFNLNGSN 427 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~-~~p~~GfG~~~~~~~~~~~f~l~~~~ 427 (561)
.+.+++.+|-+.| + . ...++++...+..++..++.+. ++-+..|+.. +...|+|+...
T Consensus 2 ~~divfvlD~S~S---------m---~----~~~~~~~k~~~~~~~~~l~~~~~rv~vv~fs~~-----~~~~~~l~~~~ 60 (179)
T 1mjn_A 2 NVDLVFLFDGSMS---------L---Q----PDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTS-----YKTEFDFSDYV 60 (179)
T ss_dssp CEEEEEEEECBTT---------C---C----HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSS-----EEEEECHHHHH
T ss_pred CccEEEEEeCCCC---------C---C----HHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCc-----eeEEEcCcccC
Confidence 3678999998885 2 1 1346777777777777776554 7889999875 22346654210
Q ss_pred CCCcccCHHHHHHHHHhhhccee-ecCCCCcHHHHHHHHHHHHh-hccccCCceEEEEEEeCCcccCHHHHHHHHHHccC
Q 008558 428 SYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVKASD 505 (561)
Q Consensus 428 ~~~~~~g~~~v~~~Y~~~~~~~~-~~gpt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdg~i~d~~~t~~~i~~as~ 505 (561)
.-+.+ .+.+..+. +.|.|+...-|+.|.+.... ........-.++++||||.-+|-... .+ .
T Consensus 61 ------~~~~~----~~~~~~i~~~~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~~----~~--~ 124 (179)
T 1mjn_A 61 ------KRKDP----DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNI----DA--A 124 (179)
T ss_dssp ------HHCCH----HHHHTTCCCCCBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSCC----GG--G
T ss_pred ------CHHHH----HHHHHhcccCCCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcch----HH--H
Confidence 00111 12333333 35889999999988753211 11112345679999999998764321 12 3
Q ss_pred CCeEEEEEeecCCCc-----hhhhhccc
Q 008558 506 LPLSILIIGVGGADF-----KEMEILDA 528 (561)
Q Consensus 506 ~p~siiivGvG~~~f-----~~m~~ld~ 528 (561)
..+.|..||||+..- ..|+.+-+
T Consensus 125 ~~i~i~~igvG~~~~~~~~~~~L~~iA~ 152 (179)
T 1mjn_A 125 KDIIRYIIGIGKHFQTKESQETLHKFAS 152 (179)
T ss_dssp TTSEEEEEEESGGGCSHHHHHTTGGGSC
T ss_pred CCCEEEEEEccccccccccHHHHHHHhC
Confidence 467888999997632 55666643
No 122
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=96.59 E-value=0.0028 Score=74.91 Aligned_cols=150 Identities=22% Similarity=0.275 Sum_probs=100.6
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC-CCcceeeecccCCCCCceeEEeCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD-KRFPAWGFGARPIDGPVSHCFNLNGSN 427 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d-~~~p~~GfG~~~~~~~~~~~f~l~~~~ 427 (561)
.+.+++.||-+.| + . .+.++++...+..+++.++.+ -++-+.-|+.. +..-|+|+.-.
T Consensus 130 ~~DIvfvlD~SgS---------m---~----~~~f~~~k~fv~~lv~~~~~~~~rVglV~Fs~~-----~~~~~~lt~~~ 188 (1095)
T 3k6s_A 130 EQDIVFLIDGSGS---------I---S----SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEFR 188 (1095)
T ss_dssp CEEEEEEEECCTT---------S---C----SHHHHHHHHHHHHHHHSSCSSSEEEEEEEESSS-----EEEEECSHHHH
T ss_pred CccEEEEEcCCCC---------C---C----hhHHHHHHHHHHHHHHhccccccEEEEEEECCe-----EEEEecCcccC
Confidence 5889999998885 2 2 256788888888899988865 46777777664 34557775311
Q ss_pred CCCcccCHHHHHHHHHhhhcce-eecCCCCcHHHHHHHHHHHHh-hccccCCceEEEEEEeCCcc-cCHHHHHHHHHHcc
Q 008558 428 SYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVV-TDLQETKDALVKAS 504 (561)
Q Consensus 428 ~~~~~~g~~~v~~~Y~~~~~~~-~~~gpt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdg~i-~d~~~t~~~i~~as 504 (561)
....+. +++..+ .+.|-|+...-|+.|.+.... ........-.|+++||||+. +|.....+++-+|.
T Consensus 189 ~~~~l~----------~ai~~i~~~gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r 258 (1095)
T 3k6s_A 189 RSSNPL----------SLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMAD 258 (1095)
T ss_dssp SCSCGG----------GGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHH
T ss_pred CHHHHH----------HHHhhhhcccCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHH
Confidence 122222 344444 457889999888888764321 11112344579999999998 46544555555555
Q ss_pred CCCeEEEEEeecCC-----CchhhhhcccC
Q 008558 505 DLPLSILIIGVGGA-----DFKEMEILDAD 529 (561)
Q Consensus 505 ~~p~siiivGvG~~-----~f~~m~~ld~d 529 (561)
..-+.|..||||++ +.+.|+.+-++
T Consensus 259 ~~GI~i~aIGVG~~~~~~~d~~eL~~IAs~ 288 (1095)
T 3k6s_A 259 AAGIIRYAIGVGLAFQNRNSWKELNDIASK 288 (1095)
T ss_dssp HHCEEECCEEBSSGGGSTTSSHHHHTTSCS
T ss_pred HCCCEEEEEecccccccccCHHHHHHHHcC
Confidence 56888999999987 77888887753
No 123
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=95.01 E-value=0.11 Score=57.41 Aligned_cols=155 Identities=7% Similarity=0.038 Sum_probs=96.9
Q ss_pred eEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCC--CCceeEEeCCC
Q 008558 351 NFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPID--GPVSHCFNLNG 425 (561)
Q Consensus 351 ~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~---yd~d~~~p~~GfG~~~~~--~~~~~~f~l~~ 425 (561)
.++++||.+. |++-.++...++..+.|+..+..+++. ....-++-++.||+.... ....|||-+..
T Consensus 37 ~ivf~IDvS~---------SM~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfgt~~t~n~l~~d~i~v~~~ 107 (609)
T 1jey_A 37 SLIFLVDASK---------AMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQE 107 (609)
T ss_dssp EEEEEEECSG---------GGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTEEEEEE
T ss_pred EEEEEEECCH---------HHcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEccCCCCCcCCCCCeEEEec
Confidence 3688999988 444333222468999999999999885 344457999999987321 13356664431
Q ss_pred CCCCCcccCHHHHHHHHHhhhc--------c-eeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCccc-CH--
Q 008558 426 SNSYCEVEGIPGIMMAYTSALH--------N-VNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DL-- 493 (561)
Q Consensus 426 ~~~~~~~~g~~~v~~~Y~~~~~--------~-~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~-d~-- 493 (561)
...|.. + .++..++.+. . +.....|.+...|.-|+++-+... .+..=-++++||||+-. +-
T Consensus 108 -L~~~~~---~-~ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~--~k~~~k~IiL~TDg~~p~~~~~ 180 (609)
T 1jey_A 108 -LDNPGA---K-RILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ--FKMSHKRIMLFTNEDNPHGNDS 180 (609)
T ss_dssp -EECCCH---H-HHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS--SCEEEEEEEEEESCSCTTTTCH
T ss_pred -CCCCCH---H-HHHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhc--hhhcCCEEEEEcCCCCCCCCch
Confidence 112221 1 1222222211 1 112457999999999988765431 11124689999999752 21
Q ss_pred ---HHHHHHHHHccCCCeEEEEEeecCCC-ch
Q 008558 494 ---QETKDALVKASDLPLSILIIGVGGAD-FK 521 (561)
Q Consensus 494 ---~~t~~~i~~as~~p~siiivGvG~~~-f~ 521 (561)
.+...+.-.+..+-+.|.+||||..+ |.
T Consensus 181 ~~~~~~~~~a~~l~~~gI~i~~igig~~~~fd 212 (609)
T 1jey_A 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFD 212 (609)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCC
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCCCCccc
Confidence 35566666777899999999999753 54
No 124
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=94.71 E-value=0.14 Score=56.10 Aligned_cols=155 Identities=9% Similarity=0.033 Sum_probs=95.9
Q ss_pred cceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcc---cccCCCCcceeeecccCCCC------C
Q 008558 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQ---VYDSDKRFPAWGFGARPIDG------P 416 (561)
Q Consensus 346 gG~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~---~yd~d~~~p~~GfG~~~~~~------~ 416 (561)
+|-.-.++++||.+.| ++--+.+ .++..+.|..++..+++ .....-++-++.||+..... .
T Consensus 4 ~~~ke~iv~~iDvS~S---------M~~~d~~-~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~d~~ 73 (565)
T 1jey_B 4 SGNKAAVVLCMDVGFT---------MSNSIPG-IESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQ 73 (565)
T ss_dssp --CCEEEEEEEECCGG---------GGCCBTT-BCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTTC
T ss_pred CCCceEEEEEEECChH---------hcccCCC-CCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCccccccC
Confidence 3444678999999985 3322222 46899999999999998 35666779999999873111 1
Q ss_pred ceeEEeCCCCCCCCcccCHHHHHHHHHhhhcceeec-CCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCccc-CHH
Q 008558 417 VSHCFNLNGSNSYCEVEGIPGIMMAYTSALHNVNLA-GPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DLQ 494 (561)
Q Consensus 417 ~~~~f~l~~~~~~~~~~g~~~v~~~Y~~~~~~~~~~-gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~-d~~ 494 (561)
..|++.+.. ...+. ..+++...+ .++.+ +.|.+...|.-|+++.+......+..=-.+++||||+-+ +-.
T Consensus 74 y~~i~vl~~-l~~~~----~~~l~~l~~---~l~~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~~ 145 (565)
T 1jey_B 74 YQNITVHRH-LMLPD----FDLLEDIES---KIQPGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKS 145 (565)
T ss_dssp STTEEEEEE-EECCC----HHHHHHHHT---TCCCCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCCT
T ss_pred CCceEEeec-CCCCC----HHHHHHHHh---hccCCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCHH
Confidence 123332211 00111 123333222 24554 679999999999987765421111123689999999643 233
Q ss_pred HHHHHHHHccCCCeEEE-EEeecCC
Q 008558 495 ETKDALVKASDLPLSIL-IIGVGGA 518 (561)
Q Consensus 495 ~t~~~i~~as~~p~sii-ivGvG~~ 518 (561)
+..+++-.+.+.-+.|. +||+|..
T Consensus 146 ~~~~~a~~l~~~gI~i~~vig~g~~ 170 (565)
T 1jey_B 146 QLDIIIHSLKKCDISLQFFLPFSLG 170 (565)
T ss_dssp THHHHHHHHHHTTEEEEEEESSCCC
T ss_pred HHHHHHHHHHhcCcEEEEEeccCCC
Confidence 45556666677889998 8898854
No 125
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=93.36 E-value=0.59 Score=50.72 Aligned_cols=138 Identities=10% Similarity=0.060 Sum_probs=81.6
Q ss_pred ceeeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCC
Q 008558 347 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (561)
Q Consensus 347 G~qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~ 426 (561)
.....+++.||-++| +.+-+.... -.+.++-.+++-+ ..- ....+-++.|+... ...++..+
T Consensus 366 ~~~~~v~lvvD~SgS---------M~~~~~~~~-l~~~~~Aa~l~~~-~~~-~~d~vglv~Fs~~~------~~~~~t~~ 427 (538)
T 1yvr_A 366 PTGKRFLLAIDVSAS---------MNQRVLGSI-LNASVVAAAMCML-VAR-TEKDSHMVAFSDEM------LPCPITVN 427 (538)
T ss_dssp CCCCCEEEEEECSGG---------GGSBSTTSS-CBHHHHHHHHHHH-HHH-HCSSEEEEEESSSE------ECCSCCTT
T ss_pred CCCceEEEEEECccc---------cCCCCCCCc-HHHHHHHHHHHHH-Hhc-cCCceEEEEECCCc------eEcCCCCc
Confidence 345788999999995 332221112 2333332222222 212 23458889997530 11233321
Q ss_pred CCCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccC----HHHHHHHHHH
Q 008558 427 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD----LQETKDALVK 502 (561)
Q Consensus 427 ~~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d----~~~t~~~i~~ 502 (561)
.++..+++.- ..+ ..|-|+++..|..+.+. ....-++++||||..++ ..+..+.+.+
T Consensus 428 ------~~l~~~l~~l----~~~-~~GgT~i~~aL~~a~~~--------~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~ 488 (538)
T 1yvr_A 428 ------MLLHEVVEKM----SDI-TMGSTDCALPMLWAQKT--------NTAADIFIVFTDCETNVEDVHPATALKQYRE 488 (538)
T ss_dssp ------SCHHHHHHHH----TTC-CCSCCCTTHHHHHHHHT--------TCCCSEEEEEECCCCCSSSCCHHHHHHHHHH
T ss_pred ------ccHHHHHHHH----hcC-CCCCCcHHHHHHHHHhc--------cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHH
Confidence 2255544432 232 67899999998887754 12346899999997643 4556666666
Q ss_pred ccCCCeEEEEEeecCCCch
Q 008558 503 ASDLPLSILIIGVGGADFK 521 (561)
Q Consensus 503 as~~p~siiivGvG~~~f~ 521 (561)
....++.+++||+|.....
T Consensus 489 ~~~~~v~l~~igig~~~~~ 507 (538)
T 1yvr_A 489 KMGIPAKLIVCAMTSNGFS 507 (538)
T ss_dssp HHTCCCEEEEEECSSSSEE
T ss_pred HhCCCcEEEEEEecCCCCc
Confidence 6677899999999987654
No 126
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=91.68 E-value=1.2 Score=48.32 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=81.7
Q ss_pred eeeeEEEEEccccCCCCCCCCCCccc-c--CCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCC
Q 008558 348 FELNFMVAVDFTASNGNPRLPDSLHY-L--DPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLN 424 (561)
Q Consensus 348 ~qi~~~vaIDfT~SNg~~~~~~slh~-~--~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~ 424 (561)
..+.++|+||-++| +.+ - +.. +.+. .++-.+++-++..- .| .+-++.|+..+ . ..++.
T Consensus 361 ~~~~~lv~vDvSgS---------M~~~~~~~~~-k~~~-~e~Aa~la~~~~r~-~d-~v~lv~Fs~~~-----~-~~~~~ 421 (535)
T 2nvo_A 361 ANTRHLLALDVSGS---------MTCGDVAGVP-GLTP-NMAAAAMSLIALRT-EP-DALTMGFAEQF-----R-PLGIT 421 (535)
T ss_dssp CCSEEEEEECCSGG---------GGSCCGGGCT-TCCH-HHHHHHHHHHHHHH-SS-EEEEEEEBSSE-----E-ECCCC
T ss_pred CCceEEEEEECCcc---------ccCCCCCCCC-cccH-HHHHHHHHHHHcCc-CC-ceEEEEECCcc-----e-EcCCC
Confidence 45889999999995 332 1 111 2454 44344555444332 23 58889997741 0 11332
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCccc----CHHHHHHHH
Q 008558 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT----DLQETKDAL 500 (561)
Q Consensus 425 ~~~~~~~~~g~~~v~~~Y~~~~~~~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~----d~~~t~~~i 500 (561)
. . .++.++++ .. .. .+.|.|+++..|+.+.+. ....-+++|||||+.+ +..+.++..
T Consensus 422 ~-----~-~~l~~~l~---~l-~~-~~~ggTdi~~~l~~a~~~--------~~~~~~vIliTD~~~~~g~~~~~~al~~~ 482 (535)
T 2nvo_A 422 P-----R-DTLESAMQ---KA-QS-VSFGGTDCAQPILWAAQE--------RLDVDTFVVYTDNETWAGQVHPTVALDQY 482 (535)
T ss_dssp T-----T-CCHHHHHH---HT-CC-SSBCCCCTTHHHHHHHHT--------TCCCSEEEEEESSCCCCCSSCHHHHHHHH
T ss_pred c-----c-hhHHHHHH---HH-hh-CCCCCccHHHHHHHHHHh--------cCCCCEEEEEeCCCccCCCCCHHHHHHHH
Confidence 2 1 34444433 32 22 237899999998766432 2446789999999654 345566666
Q ss_pred HHccCCCeEEEEEeecCCCch
Q 008558 501 VKASDLPLSILIIGVGGADFK 521 (561)
Q Consensus 501 ~~as~~p~siiivGvG~~~f~ 521 (561)
.+..+.+..+++||||.....
T Consensus 483 r~~~~~~~klv~i~l~~~~~~ 503 (535)
T 2nvo_A 483 AQKMGRAPKLIVVGLTATEFS 503 (535)
T ss_dssp HHHHSCCCEEEEEETTCSCCC
T ss_pred HHhhCCCCeEEEEeccCCCcc
Confidence 655577999999999986443
No 127
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=75.92 E-value=23 Score=33.35 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=35.4
Q ss_pred eeeEeeeeeecCCCCCceeeeEEEEEeeCce--eEEEEEEEEccC
Q 008558 82 LVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDT 124 (561)
Q Consensus 82 ~~~~~rTevi~n~lNP~w~e~f~i~~~fe~~--q~L~~~VyD~D~ 124 (561)
.....+|-|...+-+|.|.|++.+....+.. -.|.|.+|.+..
T Consensus 75 ~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 75 AISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred CceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 3457789899999999999999988776543 599999998764
No 128
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=59.76 E-value=21 Score=40.92 Aligned_cols=42 Identities=29% Similarity=0.233 Sum_probs=30.0
Q ss_pred eeecCCCCcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccC
Q 008558 449 VNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD 492 (561)
Q Consensus 449 ~~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d 492 (561)
+...|-|+...-|+.|+++.++.. ....=-++++||||+-++
T Consensus 351 l~~~GGT~i~~AL~~A~~lL~~~~--~~~~~kvIILLTDG~pt~ 392 (893)
T 2ww8_A 351 MYQFGATFTQKALMKADEILTQQA--RQNSQKVIFHITDGVPTM 392 (893)
T ss_dssp GGGGCSCCHHHHHHHHHHHHHHHS--CSSSEEEEEEEESSCCSE
T ss_pred cccCCCChHHHHHHHHHHHHHhhc--ccCCCeEEEEEcCCCCCc
Confidence 345788999999999998765421 112235899999998653
No 129
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=59.41 E-value=6.9 Score=37.64 Aligned_cols=39 Identities=28% Similarity=0.405 Sum_probs=27.2
Q ss_pred ceEEEEEEeCCccc---CHHHHHHHHHHccCCCeEEEEEeecCCC
Q 008558 478 KYFVLLIITDGVVT---DLQETKDALVKASDLPLSILIIGVGGAD 519 (561)
Q Consensus 478 ~y~vlliltdg~i~---d~~~t~~~i~~as~~p~siiivGvG~~~ 519 (561)
.--++++||||+-+ |..+.. -.|...-+-|-.||||+.+
T Consensus 9 ~~k~iillTDG~~~~g~~p~~aa---~~a~~~gi~v~tIGig~~~ 50 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPVEAA---RRAHRHGIVVNVIGIVGRG 50 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHHHHH---HHHHHTTCEEEEEEECCSS
T ss_pred CccEEEEEccCCCCCCCCHHHHH---HHHHHCCCEEEEEEecCCc
Confidence 35688999999854 444333 3455567889999998653
No 130
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=52.41 E-value=45 Score=31.23 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=64.8
Q ss_pred eeeEEEEEccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 008558 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (561)
Q Consensus 349 qi~~~vaIDfT~SNg~~~~~~slh~~~~~~~~n~y~~ai~~i~~il~~yd~d~~~p~~GfG~~~~~~~~~~~f~l~~~~~ 428 (561)
-+.+.+-+|+|.| |.+. ...-.+.+..|.+-|+.+..+ -=+|||+- .+....|.++|+.+
T Consensus 3 pvDl~fl~D~S~S------------M~~d--i~~lk~~~~~l~~~l~~~~~~---~r~Gfg~f-~Dk~~~~~l~lT~d-- 62 (212)
T 2iue_A 3 SVDLYFLMGLSGS------------AQGH--LSNVQTLGSDLLKALNEISRS---GRIGFGSI-VNMTFQHILKLTAD-- 62 (212)
T ss_dssp CEEEEEEEECCGG------------GTTT--HHHHHHHHHHHHHHHHHHCSC---EEEEEEEE-SSSCEEEEEEEESC--
T ss_pred ceEEEEEEeCCCc------------chhH--HHHHHHHHHHHHHHHHhhCcC---ceEEEEEE-EcCcceecCCcCCC--
Confidence 4678899999996 3322 344455566666666655433 33677763 22233567777654
Q ss_pred CCcccCHHHHHHHHHhhhcceeecC----CC-CcHHHHHHHHHHHHhhccccCCceEEEEEEeCCcccC
Q 008558 429 YCEVEGIPGIMMAYTSALHNVNLAG----PT-LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD 492 (561)
Q Consensus 429 ~~~~~g~~~v~~~Y~~~~~~~~~~g----pt-~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~d 492 (561)
...+.+.+.....+| |- -|.-+.+-+....+-. ..+ .-.+|+++||+.-|.
T Consensus 63 ----------~~~F~~~v~~~~vsg~~D~PE~g~dal~qa~~c~~~i~--Wr~-a~rllvl~TDa~~H~ 118 (212)
T 2iue_A 63 ----------SSQFQRELRKQLVSGKLATPKGQLDAVVQVAICLGEIG--WRN-GTRFLVLVTDNDFHL 118 (212)
T ss_dssp ----------HHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHHHT--CCS-SEEEEEEECSSCBCC
T ss_pred ----------HHHHHHHHhhccccCCCCCCchHHHHHHHHHHhhhhcc--cCC-ccEEEEEECcCCccc
Confidence 345667777788776 42 3333333332222212 334 679999999987654
No 131
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=34.88 E-value=79 Score=29.73 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=38.7
Q ss_pred eeEEEceeecCCCCCceec-cee--eeeecCCCCccEEEEEEeccCC----CCCceeEEEEEehh
Q 008558 238 IPVCKTEVLKNETKPTWKS-VFL--NIQQVGSKDSPLIIECFNFNSN----GKHDLIGKVQKSLA 295 (561)
Q Consensus 238 ~~~~kTevik~tlnP~W~e-f~~--~~~~l~d~~~~L~ieV~D~d~~----g~~d~IG~~~i~l~ 295 (561)
...|+|-|...+.+|.|+| +++ +.+.. ...-|.|+++..... .....+|.+.++|-
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi~LP~~~~--~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKVAIPIEDV--NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEEEECTTSS--TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred ceeEEEEEEEcCCCCCceEeEEEeeChhhc--CCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 4578999999999999998 554 44322 246789998865421 22357888888874
No 132
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=31.03 E-value=94 Score=35.77 Aligned_cols=92 Identities=9% Similarity=0.133 Sum_probs=54.9
Q ss_pred ccceeEeeecCCCcCCCCCCCCceEEEEEEcCCCcee-eEEEceeecCCCCCceec---ceeeeeecCCCCccEEEEEEe
Q 008558 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHI-PVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECFN 277 (561)
Q Consensus 202 ~~v~~~i~a~nL~~~d~~g~sDPy~~i~~~~~~g~~~-~~~kTevik~tlnP~W~e---f~~~~~~l~d~~~~L~ieV~D 277 (561)
.+.+.+.++.++... ..++-|+.+.... +++.+ ....|..+.-..+|.|++ |.+..+.| ..+..|.|.+|+
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~-g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dL-Pr~a~L~~ti~~ 292 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFH-GNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDL-PRMARLCFALYA 292 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEE-TTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGC-CTTCEEEEEEEE
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEE-CCEEccCceecccccCCCCcccceEEEcccccccC-CcccEEEEEEEE
Confidence 355566777777543 3356677776544 23322 233455555567899998 44445544 236789999999
Q ss_pred ccCC--C----------CCceeEEEEEehhhHh
Q 008558 278 FNSN--G----------KHDLIGKVQKSLADLE 298 (561)
Q Consensus 278 ~d~~--g----------~~d~IG~~~i~l~~l~ 298 (561)
.... + .+..||.+.+++-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 7432 2 2458999999886654
No 133
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=28.71 E-value=2.3e+02 Score=32.63 Aligned_cols=85 Identities=11% Similarity=-0.019 Sum_probs=46.6
Q ss_pred CCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEee---CceeEEEEEEEEccCCcccc----ccc-ccccc
Q 008558 66 KSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQF---EVVQTLVFRIYDVDTQFHNV----DVK-TLKLV 137 (561)
Q Consensus 66 ksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~f---e~~q~L~~~VyD~D~~~~~~----~~~-~~~l~ 137 (561)
.++-||.+.+-. +++.....+|..+.-+-+|.|++.+.|+... .....|.|.||+........ +.. ...-+
T Consensus 237 ~~~~~V~~~l~~-G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~ 315 (961)
T 1e7u_A 237 DLTVFVEANIQY-GQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKG 315 (961)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC------------------
T ss_pred CceEEEEEEEEE-CCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccc
Confidence 456677765543 2222223455555556789999998876543 44559999999875421000 000 00012
Q ss_pred cceeeeeeEeechh
Q 008558 138 EQQFLGEATCTLSQ 151 (561)
Q Consensus 138 ~~d~LG~~~~~L~e 151 (561)
+...||.+.++|-+
T Consensus 316 ~~~~lg~~n~~lfd 329 (961)
T 1e7u_A 316 KAQLLYYVNLLLID 329 (961)
T ss_dssp --CEEEEEEEESBC
T ss_pred cceeEEEEeeeeec
Confidence 34589999888754
No 134
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=28.16 E-value=2.4e+02 Score=32.93 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=57.3
Q ss_pred ccEEEEEEEEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEee---CceeEEEEEEEEc
Q 008558 46 FSQIELSFSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQF---EVVQTLVFRIYDV 122 (561)
Q Consensus 46 ~~~vel~isa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~f---e~~q~L~~~VyD~ 122 (561)
..++.++|-+-+..+.+....++-||.+.+-.+...-....+|..+. ..+|.|++.+.|+... .....|.|.||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 35677776544333444434567788887765333222333454443 4578899998887543 4456999999997
Q ss_pred cCCcccccccccccccceeeeeeEeechh
Q 008558 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQ 151 (561)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~~~L~e 151 (561)
....+ .-.....||.+.++|-+
T Consensus 433 ~~~~~-------~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 433 KGRKG-------AKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCC--------------CCEEEEEESBC
T ss_pred cCccC-------cccccceeEEeeeeeEc
Confidence 65310 00234579998888744
No 135
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=27.72 E-value=79 Score=35.03 Aligned_cols=51 Identities=8% Similarity=0.214 Sum_probs=32.0
Q ss_pred HHHHHhhhcceeecCCCC-----cHHHHHHHHHHHHhhccccCCceEEEEEEeCCccc
Q 008558 439 MMAYTSALHNVNLAGPTL-----FGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT 491 (561)
Q Consensus 439 ~~~Y~~~~~~~~~~gpt~-----f~~ii~~~~~~a~~~~~~~~~~y~vlliltdg~i~ 491 (561)
...+++.+.++..+|--. |.-+++.|+- ............+||++||..-|
T Consensus 200 ~~~f~~~v~~~~isgn~D~PE~g~dAl~qa~~c--~~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC--DEKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp HHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHC--HHHHTCCSSSEEEEEEEESSCBC
T ss_pred HHHHHHHhhceeccCCCCCCchHHHHHHHHhhc--ccccCCCCCceEEEEEECCCccc
Confidence 567788888888887533 3333332221 12233456679999999997755
No 136
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=27.49 E-value=2.3e+02 Score=32.48 Aligned_cols=103 Identities=11% Similarity=0.097 Sum_probs=56.3
Q ss_pred ccEEEEEE-EEcCCCCCCCCCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEee---CceeEEEEEEEE
Q 008558 46 FSQIELSF-SAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQF---EVVQTLVFRIYD 121 (561)
Q Consensus 46 ~~~vel~i-sa~~L~~~D~~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~f---e~~q~L~~~VyD 121 (561)
...+.++| ++.++... ..++-||.+.+-.+...-....+|..+.-..+|.|++.+.|+... .....|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45677764 66776543 346778777654422111123345555557789999998876544 345599999999
Q ss_pred ccCCc-ccccccccccccceeeeeeEeechh
Q 008558 122 VDTQF-HNVDVKTLKLVEQQFLGEATCTLSQ 151 (561)
Q Consensus 122 ~D~~~-~~~~~~~~~l~~~d~LG~~~~~L~e 151 (561)
..... .....+...-.....||.+.++|-+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp EC----------------CEEEEEEEEESBC
T ss_pred ecCCccCccccccccccccceEEEEeeeEEC
Confidence 74310 0000000000134589999888744
No 137
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=23.29 E-value=3.3e+02 Score=24.00 Aligned_cols=96 Identities=13% Similarity=0.195 Sum_probs=63.4
Q ss_pred ccEEEEEEEEcCCCCCCC--CCCCCcEEEEEEEcCCCceeeEeeeeeecCCCCCceeeeEEEEEeeC-------ceeEEE
Q 008558 46 FSQIELSFSAADLRDRDV--LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-------VVQTLV 116 (561)
Q Consensus 46 ~~~vel~isa~~L~~~D~--~sksDPyv~v~~~~~~~~~~~~~rTevi~n~lNP~w~e~f~i~~~fe-------~~q~L~ 116 (561)
..-+||+|..-.|.+.-+ .+-.+|..-+...==+ -+..-|-++. .++|.++.+-.+.+.-+ ....|+
T Consensus 17 EnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d---fEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 17 ENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD---FELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT---CCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEec---eEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 477899988766643221 1335776665553201 1355666666 89999998866554322 123799
Q ss_pred EEEEEccCCcccccccccccccceeeeeeEeechhhhccCC
Q 008558 117 FRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN 157 (561)
Q Consensus 117 ~~VyD~D~~~~~~~~~~~~l~~~d~LG~~~~~L~el~~~~~ 157 (561)
++++.... .....||.+.++|.+++...+
T Consensus 93 lELhqa~g------------~~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 93 LEVHQAYS------------TEYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp EEEEEECS------------SCEEEEEEEEECCSHHHHCCS
T ss_pred EEEEEeeC------------CCceEEEEEEEEhHHhhCcCC
Confidence 99998764 357899999999999997654
Done!