Your job contains 1 sequence.
>008559
MTIIEEPEPNPTADHILDWLEESVSFLPSFLDDPYNANGIDDYQWWNQGQDMAPEQLIGN
TGASSAAAPVNNTEATVNVSTISVRPTDSVVPGPPAPADSSKKRRNADDPRTRSSQSHHQ
RKNQGRRISETEEGNEEGVIVKRSVGNKKNTNKSTGNNGNNGNSKEGRWAEQLLNPCAAA
ITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSLSSSSTTTTSTGPLTF
SSTEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQ
WPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI
NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPK
GVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKAL
TNRAEMNEGKDKWCDRMRGVGFVGDVFGEDAIDGGRALLRKYDNSWETRVEERDGCIELW
WKGQPVSFCSLWKLNVKVEDS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008559
(561 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 946 8.0e-110 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 368 7.4e-34 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 337 1.5e-28 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 305 1.3e-24 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 273 5.3e-21 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 264 1.3e-19 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 254 7.1e-19 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 254 1.0e-18 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 243 1.1e-17 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 243 1.7e-17 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 223 1.1e-14 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 209 4.5e-14 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 206 1.2e-13 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 142 4.3e-13 3
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 182 5.5e-13 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 141 4.6e-12 3
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 187 3.7e-11 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 185 4.8e-11 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 182 1.2e-10 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 181 1.3e-10 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 157 1.5e-10 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 180 1.8e-10 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 124 1.5e-08 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 157 8.3e-08 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 152 2.9e-07 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 147 5.1e-07 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 137 4.7e-06 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 130 5.6e-05 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 127 0.00012 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 122 0.00035 1
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 946 (338.1 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 183/310 (59%), Positives = 229/310 (73%)
Query: 244 EPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPT 303
E + FQK+LL FY+ SPWFA PNN+ANS+ILQILAQD ++ ++LHI+DIGVSHG+QWPT
Sbjct: 216 EVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDK-KDLHIIDIGVSHGMQWPT 274
Query: 304 LLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQ 363
LLEAL+ R GPPP VR+T+I+ D A+ PFSVGPPG NY QLLGFA+S+ INLQ
Sbjct: 275 LLEALSCRLEGPPPRVRITVIS-----DLTADIPFSVGPPGYNYGSQLLGFARSLKINLQ 329
Query: 364 INRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVI 423
I+ L+ Q++ TSP E LIVC QFRLHHL HS DER E L+ +RSL PKGV+
Sbjct: 330 ISVLDK-------LQLIDTSPHENLIVCAQFRLHHLKHSINDERGETLKAVRSLRPKGVV 382
Query: 424 LSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALTNR 483
L ENN +CS + DFA GF++++EY+W+FLDSTS+ FK SEER++MEGEA K L N
Sbjct: 383 LCENNGECS--SSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEGEATKVLMNA 440
Query: 484 AEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKG 543
+MNEGK+KW +RMR EDA+DG ++LLRKYDN+WE R+E+ D L WKG
Sbjct: 441 GDMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLRKYDNNWEIRMEDGDTFAGLMWKG 500
Query: 544 QPVSFCSLWK 553
+ VSFCSLWK
Sbjct: 501 EAVSFCSLWK 510
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 165/313 (52%), Positives = 198/313 (63%)
Query: 120 QRKNQGRRISETEEGNEEGVIVKRSVXXXXXXXXXXXXXXXXXXXXEGRWAEQLLNPCAA 179
Q +Q R+ S +G E VK+S EGRWAE+LLNPCA
Sbjct: 98 QPNDQSRKRSH--DGFLEAQQVKKSARSKRKAIKSSEKSSKDGNK-EGRWAEKLLNPCAL 154
Query: 180 AITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXXXXXXXXX 239
AITA N +RVQH L VL ELAS +GDAN RLAA GLRA
Sbjct: 155 AITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTFAS 214
Query: 240 XXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGV 299
E + FQK+LL FY+ SPWFA PNN+ANS+ILQILAQD ++ ++LHI+DIGVSHG+
Sbjct: 215 A---EVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDK-KDLHIIDIGVSHGM 270
Query: 300 QWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMN 359
QWPTLLEAL+ R GPPP VR+T+I+ D A+ PFSVGPPG NY QLLGFA+S+
Sbjct: 271 QWPTLLEALSCRLEGPPPRVRITVIS-----DLTADIPFSVGPPGYNYGSQLLGFARSLK 325
Query: 360 INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEP 419
INLQI+ L+ Q++ TSP E LIVC QFRLHHL HS DER E L+ +RSL P
Sbjct: 326 INLQISVLDK-------LQLIDTSPHENLIVCAQFRLHHLKHSINDERGETLKAVRSLRP 378
Query: 420 KGVILSENNMDCS 432
KGV+L ENN +CS
Sbjct: 379 KGVVLCENNGECS 391
Score = 159 (61.0 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 47/143 (32%), Positives = 71/143 (49%)
Query: 3 IIEEPEP-NPTADHILDWLEESVSF--LPSFLDDPYNANGIDDYQWWNQGQDMAPEQLIG 59
++EE EP N T DH+L WLE+SVS LP F DD Y + D Q W Q PE
Sbjct: 2 LLEETEPPNQTLDHVLSWLEDSVSLSPLPGF-DDSYLLHEFDGSQTWEWDQTQDPEHGFI 60
Query: 60 NTGASSAAAPVNNTEATVNVSTISVRPT-D-SVVPGPPAPADSSKKRRNADDPRTRSSQS 117
+ + +A EAT N+ ++ P+ D + P P D S+KR + + +
Sbjct: 61 QSYSQDLSAAYVGCEAT-NLEVVTEAPSIDLDLPPEIQQPNDQSRKRSHDGFLEAQQVKK 119
Query: 118 HHQRKNQGRRISE--TEEGNEEG 138
+ K + + SE +++GN+EG
Sbjct: 120 SARSKRKAIKSSEKSSKDGNKEG 142
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 115/401 (28%), Positives = 178/401 (44%)
Query: 166 EGRWAEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXX 225
+ + EQLL CA AI + + +L+VL+ +A P GD+ RL + LRA
Sbjct: 23 DANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSK 82
Query: 226 XXXXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQV 285
RF L F D +PW F AN++IL A + ++ V
Sbjct: 83 TPTLSSTISFLPQADELH--RFSVVELAAFVDLTPWHRFGFIAANAAILT--AVEGYSTV 138
Query: 286 QNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGD 345
HI+D+ ++H +Q PTL++A+ R PPPL++LT+++ +D PF + +
Sbjct: 139 ---HIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVS---SSDHFP--PF-INISYE 189
Query: 346 NYSLQLLGFAKSMNINLQINRLESHPLQDLSS--QMVSTSPE---ETLIVCTQFRLHH-- 398
+L+ FA + NI ++ + S SS Q + P E L+V L +
Sbjct: 190 ELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIP 249
Query: 399 ---LNHSTPDERTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLD 455
L S+ RT FL+ LRSL P+ V L E ++D + N Y W D
Sbjct: 250 EEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSEN---LVNRLKSAFNYFWIPFD 306
Query: 456 STSAAFKGR----ESEERRVMEGEAAKALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDA 511
+T + E+E +E AK R E E K +W +RMR EDA
Sbjct: 307 TTDTFMSEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDA 366
Query: 512 IDGGRALLRKYDNSWETRVEERDGCIELWWKGQPVSFCSLW 552
+ +A+L ++ W + E+ D + L WKG V F ++W
Sbjct: 367 VADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 337 (123.7 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 115/403 (28%), Positives = 174/403 (43%)
Query: 168 RWAEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXX 227
+WA+ +L A A + + R Q +L+ L+EL+SP GD +LA++ L+A
Sbjct: 141 KWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGE 200
Query: 228 XXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQN 287
+K++L F + SPW F + AN +IL+ A D ++
Sbjct: 201 RCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILE--AVDGEAKI-- 256
Query: 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLT--IIAPTAENDQNAETPF--SVGPP 343
HI+DI + QWPTLLEAL RS P L RLT ++A NDQ A +G
Sbjct: 257 -HIVDISSTFCTQWPTLLEALATRSDDTPHL-RLTTVVVANKFVNDQTASHRMMKEIGNR 314
Query: 344 GDNYSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHST 403
+ ++ +L+G NI + L L +L P+E L + +H + S
Sbjct: 315 MEKFA-RLMGVPFKFNIIHHVGDLSEFDLNELD-----VKPDEVLAINCVGAMHGIA-SR 367
Query: 404 PDERTEFLRVLRSLEPKGVILSENNMDC---SCGNCGD-FATGFARRVEYLWRFLDSTSA 459
R + R L P+ V + E D G D F GF + + +S
Sbjct: 368 GSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEE 427
Query: 460 AFKGRESEERRVMEGEAAKAL--------TNRAEMNEGKDKWCDRMRXXXXXXXXXXEDA 511
+F R S ER ++E A +A+ ++ E E KW RMR ++
Sbjct: 428 SFP-RTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEV 486
Query: 512 IDGGRALLRKYDNSWETRVEERDGC-IELWWKGQPVSFCSLWK 553
D RALLR+Y + V+ D I L W+ QPV + S W+
Sbjct: 487 ADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 305 (112.4 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 91/319 (28%), Positives = 150/319 (47%)
Query: 245 PRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTL 304
P F + ++FY+ P+ F + AN +IL+ + R +H++D+G++ G+QWP L
Sbjct: 248 PSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARR-----VHVIDLGLNQGMQWPAL 302
Query: 305 LEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQI 364
++AL R GGPP RLT I P +N+++ +G +L FA++M + +
Sbjct: 303 MQALALRPGGPPSF-RLTGIGPP--QTENSDSLQQLG-------WKLAQFAQNMGVEFEF 352
Query: 365 NRLESHPLQDLSSQMVSTSPE-ETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVI 423
L + L DL +M T PE ETL+V + F LH L + + L +++++P V
Sbjct: 353 KGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLL-ARSGSIEKLLNTVKAIKPSIVT 411
Query: 424 LSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAF----KGRESEE----RRVMEGE 475
+ E + N F F + Y DS ++ + R E R+++
Sbjct: 412 VVEQEAN---HNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVV 468
Query: 476 AAKALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDG 535
AA+ ++R E +E +W RM+ A LL Y RVEE DG
Sbjct: 469 AAEG-SDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDG 527
Query: 536 CIELWWKGQPVSFCSLWKL 554
C+ + W+ +P+ S WKL
Sbjct: 528 CLMIGWQTRPLITTSAWKL 546
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 273 (101.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 93/321 (28%), Positives = 145/321 (45%)
Query: 244 EPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPT 303
+P F + +NFYD P+ F + AN +IL+ + R +H++D+G++ G+QWP
Sbjct: 220 DPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRV-----VHVIDLGLNQGMQWPA 274
Query: 304 LLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQ 363
L++AL R GGPP RLT + N N E +G + L L A+++ + +
Sbjct: 275 LMQALALRPGGPPSF-RLTGVG----NPSNREGIQELG-----WKLAQL--AQAIGVEFK 322
Query: 364 INRLESHPLQDLSSQMVSTSPE-ETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGV 422
N L + L DL M T E ETL+V + F LH + S P + L +++++P V
Sbjct: 323 FNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVL-SQPGSIEKLLATVKAVKPGLV 381
Query: 423 ILSENNMDCSCGNCGD-FATGFARRVEYLWRFLDSTSAAF----KGRESEE----RRVME 473
+ E + + GD F F + Y DS + R E R+++
Sbjct: 382 TVVEQEANHN----GDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILN 437
Query: 474 GEAAKALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEER 533
A + ++R E +E +W RM DA LL RVEE
Sbjct: 438 LVATEG-SDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEEN 496
Query: 534 DGCIELWWKGQPVSFCSLWKL 554
DG + L W+ +P+ S WKL
Sbjct: 497 DGSLMLAWQTKPLIAASAWKL 517
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 264 (98.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 83/310 (26%), Positives = 138/310 (44%)
Query: 253 LNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRS 312
++FY+ P+ F + AN +IL+ Q + + +H++D +S G+QWP L++AL R
Sbjct: 241 MHFYETCPYLKFAHFTANQAILEAF-QGK----KRVHVIDFSMSQGLQWPALMQALALRP 295
Query: 313 GGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPL 372
GGPP + RLT I P A + N + VG +L A+++++ + ++ L
Sbjct: 296 GGPP-VFRLTGIGPPAPD--NFDYLHEVG-------CKLAHLAEAIHVEFEYRGFVANTL 345
Query: 373 QDLSSQMVSTSPEE--TLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMD 430
DL + M+ P E ++ V + F LH L P + L V+ ++P+ + E
Sbjct: 346 ADLDASMLELRPSEIESVAVNSVFELHKLL-GRPGAIDKVLGVVNQIKPEIFTVVEQE-- 402
Query: 431 CSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALT-----NRAE 485
S N F F + Y DS G++ V G+ + +R E
Sbjct: 403 -SNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKVMSEVYLGKQICNVVACDGPDRVE 461
Query: 486 MNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQP 545
+E +W +R +A LL ++ RVEE DGC+ L W +P
Sbjct: 462 RHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRP 521
Query: 546 VSFCSLWKLN 555
+ S WKL+
Sbjct: 522 LIATSAWKLS 531
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 113 RSSQSHHQRKNQGRRISETEEGN 135
R HH + + ++E ++GN
Sbjct: 3 RDHHHHHHQDKKTMMMNEEDDGN 25
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 254 (94.5 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 87/321 (27%), Positives = 148/321 (46%)
Query: 248 FQKSL-LNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLE 306
F +L ++FY+ P+ F + AN +IL++ A + +H++D+G++HG+QWP L++
Sbjct: 218 FSDTLQIHFYESCPYLKFAHFTANQAILEVFAT-----AEKVHVIDLGLNHGLQWPALIQ 272
Query: 307 ALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINR 366
AL R GPP RLT I + + Q E + +G QL A ++ +N +
Sbjct: 273 ALALRPNGPPDF-RLTGIGYSLTDIQ--EVGWKLG--------QL---ASTIGVNFEFKS 318
Query: 367 LESHPLQDLSSQMVSTSPE-ETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS 425
+ + L DL +M+ P E++ V + F LH L + P +FL ++S+ P + +
Sbjct: 319 IALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLL-AHPGSIDKFLSTIKSIRPDIMTVV 377
Query: 426 ENNMDCSCGNCGDFATGFARRVEYLWRFLDST-------SAAFKGRESEERRVMEGEAAK 478
E + + D T L+ L+ S F GR+ EGE
Sbjct: 378 EQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRVMSELFLGRQILNLVACEGE--- 434
Query: 479 ALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIE 538
+R E +E ++W +R +A LL Y + VEE +GC+
Sbjct: 435 ---DRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLL 491
Query: 539 LWWKGQPVSFCSLWKLNVKVE 559
L W+ +P+ S W++N +VE
Sbjct: 492 LGWQTRPLIATSAWRIN-RVE 511
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 254 (94.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 81/310 (26%), Positives = 136/310 (43%)
Query: 253 LNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRS 312
++FY+ P+ F + AN +IL+ + +H++D ++ G+QWP L++AL R
Sbjct: 293 MHFYETCPYLKFAHFTANQAILEAFEGKKR-----VHVIDFSMNQGLQWPALMQALALRE 347
Query: 313 GGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPL 372
GGPP RLT I P A + N++ VG +L A+++++ + ++ L
Sbjct: 348 GGPPTF-RLTGIGPPAPD--NSDHLHEVG-------CKLAQLAEAIHVEFEYRGFVANSL 397
Query: 373 QDLSSQMVSTSPEETLIVCTQ--FRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMD 430
DL + M+ P +T V F LH L P + L V++ ++P VI + +
Sbjct: 398 ADLDASMLELRPSDTEAVAVNSVFELHKLL-GRPGGIEKVLGVVKQIKP--VIFTVVEQE 454
Query: 431 CSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALT-----NRAE 485
S N F F + Y DS ++ V G+ L +R E
Sbjct: 455 -SNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVE 513
Query: 486 MNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQP 545
+E +W +R +A LL +++ RVEE +GC+ L W +P
Sbjct: 514 RHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRP 573
Query: 546 VSFCSLWKLN 555
+ S WKL+
Sbjct: 574 LITTSAWKLS 583
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 243 (90.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 97/389 (24%), Positives = 160/389 (41%)
Query: 177 CAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXXXXXX 236
CA A++ +L ++ L ++ S +G+ RL A+ L
Sbjct: 126 CAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRC 185
Query: 237 XXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVS 296
E + L Y+ P+F F AN +I + + ++ N+V HI+D +
Sbjct: 186 PEPAST-ELLSYMHIL---YEVCPYFKFGYMSANGAIAEAMKEE--NRV---HIIDFQIG 236
Query: 297 HGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAK 356
G QW TL++A R GGPP +R+T I +D + ++ G +L AK
Sbjct: 237 QGSQWVTLIQAFAARPGGPPR-IRITGI-----DDMTSA--YARGGGLSIVGNRLAKLAK 288
Query: 357 SMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHL---NHSTPDERTEFLRV 413
N+ + N + S + ++ + + P E L V F LHH+ + ST + R LR+
Sbjct: 289 QFNVPFEFNSV-SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRM 347
Query: 414 LRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAF----KGRESEER 469
++SL PK V L E + N F F + Y +S K R + E+
Sbjct: 348 VKSLSPKVVTLVEQESNT---NTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQ 404
Query: 470 RVMEGEAAKALT----NRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNS 525
+ + + +R E +E KW R ++LLR Y +
Sbjct: 405 HCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDK 464
Query: 526 WETRVEERDGCIELWWKGQP-VSFCSLWK 553
+ R+EERDG + L W + V+ C+ WK
Sbjct: 465 Y--RLEERDGALYLGWMHRDLVASCA-WK 490
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 243 (90.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 88/311 (28%), Positives = 140/311 (45%)
Query: 257 DKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPP 316
D P+ F + AN +IL+ A ++ N++ HI+D G+ G+QWP LL+AL R+ G P
Sbjct: 294 DACPYSKFAHLTANQAILE--ATEKSNKI---HIVDFGIVQGIQWPALLQALATRTSGKP 348
Query: 317 PLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLS 376
+R++ I P ++ E P S+ G+ +L FAK +++N + + P+ L+
Sbjct: 349 TQIRVSGI-PAPSLGESPE-P-SLIATGN----RLRDFAKVLDLNFDFIPILT-PIHLLN 400
Query: 377 SQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMDCSCGNC 436
P+E L V +L+ L TP LR+ +SL P+ V L E + +
Sbjct: 401 GSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLN---- 456
Query: 437 GDFATGFARRVEYLWRFLDSTSAAFK---GRESEER----RVMEGEAAKALTN------R 483
GFA RV+ +F + + + GR+SEER R + G L
Sbjct: 457 ---RVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIH 513
Query: 484 AEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNS-WETRVEERDGCIELWWK 542
E E K++W M A+ + LL Y+ S + VE + G I L W
Sbjct: 514 RERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWN 573
Query: 543 GQPVSFCSLWK 553
P+ S W+
Sbjct: 574 DLPLLTLSSWR 584
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 223 (83.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 86/315 (27%), Positives = 133/315 (42%)
Query: 257 DKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPP 316
D P+ F + AN +IL+ NQ N+HI+D G+ G+QW LL+AL RS G P
Sbjct: 248 DACPYSKFAHLTANQAILEAT-----NQSNNIHIVDFGIFQGIQWSALLQALATRSSGKP 302
Query: 317 PLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLS 376
+R++ I + D + + G N +L FA +++N + + + P+Q L+
Sbjct: 303 TRIRISGIPAPSLGDSPGPSLIATG----N---RLRDFAAILDLNFEFYPVLT-PIQLLN 354
Query: 377 SQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMDCSCGNC 436
P+E L+V L+ L T LR+ RSL P+ V L E + +
Sbjct: 355 GSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLN---- 410
Query: 437 GDFATGFARRVEYLWRFLDSTSAAFK---GRESEER----RVMEGEAAKALTNRAEMN-- 487
FA RV+ RF + + + R+S+ER RV+ G L + N
Sbjct: 411 ---RVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNK 467
Query: 488 --------EGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSW-ETRVEERDGCIE 538
E K++W M A+ + LL Y+ S + VE G I
Sbjct: 468 PGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFIS 527
Query: 539 LWWKGQPVSFCSLWK 553
L W P+ S W+
Sbjct: 528 LAWNNVPLLTVSSWR 542
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 256 YDKSPWFAFPNNIANSSILQILAQD 280
Y P+ +FP+ ++ S L + +D
Sbjct: 111 YGHDPFVSFPSRLSAPSYLNRVNKD 135
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 209 (78.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 94/393 (23%), Positives = 151/393 (38%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
+L CA A++ NL + + L + S +G+ RL A+ L
Sbjct: 53 VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
E F + ++ P+F F AN +I + + + + +HI+D
Sbjct: 113 LQSREP-----ESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDE-----ERIHIID 162
Query: 293 IGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352
+ G QW L++A R GG P +R+T + + +V +L
Sbjct: 163 FQIGQGSQWIALIQAFAARPGGAPN-IRITGVG-------DGSVLVTV-------KKRLE 207
Query: 353 GFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHL---NHSTPDERTE 409
AK ++ + N + S P ++ + + E L V + LHHL + S + R
Sbjct: 208 KLAKKFDVPFRFNAV-SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDR 266
Query: 410 FLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEER 469
LR+++SL PK V L E +C+ N F F + Y +S E
Sbjct: 267 LLRMVKSLSPKVVTLVEQ--ECNT-NTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERI 323
Query: 470 RVMEGEAAKALTN--------RAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRK 521
+ + A+ + N R E +E KW R RALLR
Sbjct: 324 NIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD 383
Query: 522 YDNSWETRVEERDGCIELWWKGQP-VSFCSLWK 553
Y N + +EERDG + L W + VS C+ WK
Sbjct: 384 YSNGYA--IEERDGALYLGWMDRILVSSCA-WK 413
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 109/406 (26%), Positives = 161/406 (39%)
Query: 173 LLNPCAAAITAGNLTRVQHLL-YVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXX 231
LL CA + G+L + VL ASP GDA RLA H RA
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHV 112
Query: 232 XXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHIL 291
+ L F +P+ F + AN +IL+ A D +V HIL
Sbjct: 113 VVGGGAARPASSG------AYLAFNQIAPFLRFAHLTANQAILE--AVDGARRV---HIL 161
Query: 292 DIGVSHGVQWPTLLEALTRRSGGP--PPLVRLTIIAPTAENDQNAET-----PF--SVGP 342
D+ HGVQWP LL+A+ R+ PP VR+T A+ D T F S+
Sbjct: 162 DLDAVHGVQWPPLLQAIAERADPALGPPEVRVT--GAGADRDTLLRTGNRLRAFARSIHL 219
Query: 343 PGDNYSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTS--PEETLIV-CTQFRLHHL 399
P +++ LL A + ++ + ++ P+ETL V C F LH+L
Sbjct: 220 PF-HFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMF-LHNL 277
Query: 400 NHSTPDERTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSA 459
+ DE FL+ ++++ P V ++E G GD RRV +D SA
Sbjct: 278 --AGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGG-GDHIDDLPRRVGVA---MDHYSA 331
Query: 460 AFKGRE------SEERRVMEGEA-AKALTNRAEMNEGK-----DKWCDRMRXXXXXXXXX 507
F+ E S ER +E E + + + G+ ++W R
Sbjct: 332 VFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFAARPL 391
Query: 508 XEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQPVSFCSLWK 553
A+ R LLR + S V+E G L W+ +P+ S W+
Sbjct: 392 SAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ 437
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 142 (55.0 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 46/164 (28%), Positives = 68/164 (41%)
Query: 166 EGRWAEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXX 225
EG LL CA A++A NL LL + +L++P G + R+AA+ A
Sbjct: 286 EGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNS 345
Query: 226 XXXXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQV 285
+ N SP F + AN +I Q+ +
Sbjct: 346 CLGIYAALPSRWMPQTHSLKMVSAFQVFNGI--SPLVKFSHFTANQAI-----QEAFEKE 398
Query: 286 QNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAE 329
++HI+D+ + G+QWP L L R GGPP VRLT + + E
Sbjct: 399 DSVHIIDLDIMQGLQWPGLFHILASRPGGPPH-VRLTGLGTSME 441
Score = 114 (45.2 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 44/168 (26%), Positives = 72/168 (42%)
Query: 396 LHHLNHSTPD---ERTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWR 452
+H L HS D L +L+ L PK V + E ++ + G F F + Y
Sbjct: 488 VHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLS----HAGSFLGRFVEAIHYYSA 543
Query: 453 FLDSTSAAFKGRESEERRVMEGEA-AKALTN------RAEMNEGK-DKWCDRMRXXXXXX 504
DS A++ G ESEER V+E + +K + N + E K + W ++M+
Sbjct: 544 LFDSLGASY-GEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGFKG 602
Query: 505 XXXXEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQPVSFCSLW 552
+A LL + + T V++ +G ++L WK + S W
Sbjct: 603 ISLAGNAATQATLLLGMFPSDGYTLVDD-NGTLKLGWKDLSLLTASAW 649
Score = 39 (18.8 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 111 RTRSSQSHHQRKNQGRRISETEEG 134
+T ++++ +RK + +R + EEG
Sbjct: 264 QTNTAEALRERKEEIKRQKQDEEG 287
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 182 (69.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 84/316 (26%), Positives = 134/316 (42%)
Query: 259 SPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGP--- 315
+P+ F + AN +IL + N LHILD+ +S G+QWP L++AL RS P
Sbjct: 153 TPFIRFGHLTANQAILDA-TETNDNGA--LHILDLDISQGLQWPPLMQALAERSSNPSSP 209
Query: 316 PPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLE--SHPLQ 373
PP +R+T D + GD +L FA S+ + Q + L L
Sbjct: 210 PPSLRIT----GCGRDVTG-----LNRTGD----RLTRFADSLGLQFQFHTLVIVEEDLA 256
Query: 374 DLSSQM----VSTSPEETLIV-CTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENN 428
L Q+ +S ET+ V C F LH + + D FL ++SL + V ++E
Sbjct: 257 GLLLQIRLLALSAVQGETIAVNCVHF-LHKIFNDDGDMIGHFLSAIKSLNSRIVTMAERE 315
Query: 429 MDCSCGNCGD--FATGFARRVEYLWRFLDSTSAAF--KGRES---EER----RVMEGEAA 477
N GD F F+ V++ DS A RE E+R +++ AA
Sbjct: 316 -----ANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAA 370
Query: 478 KALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCI 537
+ T R + + + W + M+ A+ + LLR + S ++ + +
Sbjct: 371 EE-TERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSL 429
Query: 538 ELWWKGQPVSFCSLWK 553
L W+ +P+ S WK
Sbjct: 430 FLGWQNRPLFSVSSWK 445
Score = 62 (26.9 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 172 QLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRL 210
+LL A ++ N T Q+LL +L +SP GD+ RL
Sbjct: 43 RLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERL 81
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 141 (54.7 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 68/286 (23%), Positives = 114/286 (39%)
Query: 286 QNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGD 345
+ +HI+D + G+QWP+ ++L R PP VR+T I E+ + GD
Sbjct: 384 ERVHIIDFDIKQGLQWPSFFQSLASRIN-PPHHVRITGIG---------ESKLELNETGD 433
Query: 346 NYSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHH-LNHSTP 404
+L GFA++MN+ + + + L+D+ M+ E++ V ++H L T
Sbjct: 434 ----RLHGFAEAMNLQFEFHPVVDR-LEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTG 488
Query: 405 DERTEFLRVLRSLEPKGVILSE-----NNMDCSCGNCGDFATGFARRVEYLWRFLDSTSA 459
+FL ++RS P ++L+E N+ C ++ + + L + S
Sbjct: 489 AAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKY-YSAMFDAIHTNLATDSL 547
Query: 460 A-FKGRESEERRVMEGEAAKALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRAL 518
K E R + A ++R E + G W + E + + L
Sbjct: 548 MRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKML 607
Query: 519 LRKY--DNSWETRVEERD----------GCIELWWKGQPVSFCSLW 552
LR Y DN VE D G + L W QP+ S W
Sbjct: 608 LRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 95 (38.5 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 37/152 (24%), Positives = 61/152 (40%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANH-RLAAHGLRAXXXXXXXXXXXXXX 231
LL C AI + N+ + H + +LASP G RL A+ + A
Sbjct: 277 LLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFH 336
Query: 232 XXXXXXXXXXXXEPRFFQKSLLNFYDK-SPWFAFPNNIANSSILQILAQDRHNQVQNLHI 290
+ + L F ++ +P F + AN +L+ + +HI
Sbjct: 337 IAPPREFDRTVEDE---SGNALRFLNQVTPIPKFIHFTANEMLLRAFEGK-----ERVHI 388
Query: 291 LDIGVSHGVQWPTLLEALTRRSGGPPPLVRLT 322
+D + G+QWP+ ++L R PP VR+T
Sbjct: 389 IDFDIKQGLQWPSFFQSLASRIN-PPHHVRIT 419
Score = 49 (22.3 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 28/111 (25%), Positives = 48/111 (43%)
Query: 21 EESVSFLPS-FLDDPYNANGIDDYQWWNQGQDMAPEQLIGNTGASSAAAPVNNTEATVNV 79
EE V F+PS + P N +D ++A IG+ S+ P EA+
Sbjct: 170 EEKVCFVPSEVISQPL-PNWVDSVI-----TELAG---IGDKDVESSL-PAAVKEASGGS 219
Query: 80 STISVRPTDSVVPGPPAPADSSKK---RRNADDPRTRSSQSHHQRKNQGRR 127
ST + + S+ P P + S+ R A + RT + +++ +N +R
Sbjct: 220 STSASSESRSLSHRVPEPTNGSRNPYSHRGATEERTTGNINNNNNRNDLQR 270
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 94/394 (23%), Positives = 149/394 (37%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
LL CA +++AG+ LL + + SP GDA+ RLA A
Sbjct: 318 LLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQS 377
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
+ KS F SP+ +N IL A+D LHI+D
Sbjct: 378 YYDSISSKKRTAAQIL-KSYSVFLSASPFMTLIYFFSNKMILDA-AKD----ASVLHIVD 431
Query: 293 IGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFS-VGPPGDNYSLQL 351
G+ +G QWP ++ L++ + G L R+T I E Q+ P + G +L
Sbjct: 432 FGILYGFQWPMFIQHLSKSNPGLRKL-RITGI----EIPQHGLRPTERIQDTGR----RL 482
Query: 352 LGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDE----R 407
+ K + + N + S + + + P E L V R +L P E R
Sbjct: 483 TEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPR 542
Query: 408 TEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESE 467
FL+++R + P V LS + ++ S N F T F + + D A +E+
Sbjct: 543 DGFLKLIRDMNPN-VFLS-STVNGSF-NAPFFTTRFKEALFHYSALFDLFGATLS-KENP 598
Query: 468 ERRVMEGEA-AKALTN--------RAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRAL 518
ER EGE + + N R E E +W RM + + R
Sbjct: 599 ERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREK 658
Query: 519 LRKYDNSWETRVEERDGCIELWWKGQPVSFCSLW 552
++K+ + ++E WKG+ + S W
Sbjct: 659 MKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 79/312 (25%), Positives = 136/312 (43%)
Query: 256 YDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGP 315
++ P F F AN +IL+ + + + +HI+D ++ G Q+ TL+ ++ G
Sbjct: 303 FEVCPCFKFGFLAANGAILEAIKGE-----EEVHIIDFDINQGNQYMTLIRSIAELPGKR 357
Query: 316 PPLVRLTIIAPTAENDQNAETPFSVGPPGDNY-SLQLLGFAKSMNINLQINRLESHPLQD 374
P L RLT I D S+G G L+L A+ ++ + + S
Sbjct: 358 PRL-RLTGI------DDPESVQRSIG--GLRIIGLRLEQLAEDNGVSFKFKAMPSKT-SI 407
Query: 375 LSSQMVSTSPEETLIVCTQFRLHHL---NHSTPDERTEFLRVLRSLEPKGVILSENNMDC 431
+S + P ETLIV F+LHH+ + +T ++R E L +++SL PK V + E +++
Sbjct: 408 VSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNT 467
Query: 432 SCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEA-AKALTN-------- 482
N F F EY +S RES+ER +E + A+ + N
Sbjct: 468 ---NTSPFFPRFIEAYEYYSAVFESLDMTLP-RESQERMNVERQCLARDIVNIVACEGEE 523
Query: 483 RAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRK-YDNSWETRVEERDGCIELWW 541
R E E KW RM + + L+++ Y N + +++E G + W
Sbjct: 524 RIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKY--KLKEEMGELHFCW 581
Query: 542 KGQPVSFCSLWK 553
+ + + S W+
Sbjct: 582 EEKSLIVASAWR 593
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 79/314 (25%), Positives = 136/314 (43%)
Query: 256 YDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEAL-TRRSGG 314
Y+ SP F AN +IL A + + H++D + G Q+ LL L TRR+G
Sbjct: 337 YELSPCFKLGFEAANLAILDA-ADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGK 395
Query: 315 PP----PLVRLTIIAPTAEN---DQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367
P+V++T +A D E GD L LG + I++ N +
Sbjct: 396 SQSQNSPVVKITAVANNVYGCLVDDGGEERLKA--VGD--LLSQLG--DRLGISVSFNVV 449
Query: 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHL-NHS--TPDERTEFLRVLRSLEPKGVIL 424
S L DL+ + + P+ETL V F+L+ + + S T + R E LR ++ L+P+ V L
Sbjct: 450 TSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTL 509
Query: 425 SENNMDCSC----GNCGDFATGFARRVEYLWRFLDSTSA-AFKGRESEERRVMEGEAAKA 479
E M+ + G + + +E + + ST++ K E R+++ A +
Sbjct: 510 VEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGIGRKLVNAVACEG 569
Query: 480 LTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIEL 539
+ +R E E KW RM E + ++ + + V+E +G +
Sbjct: 570 I-DRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGFT--VKEDNGGVCF 626
Query: 540 WWKGQPVSFCSLWK 553
W G+ ++ S W+
Sbjct: 627 GWMGRALTVASAWR 640
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 90/394 (22%), Positives = 147/394 (37%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
+L CA A+ +L L+ L ++ S +G+ RL A+ L
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKA 289
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
P + Y+ P+F F AN +I + + + +HI+D
Sbjct: 290 LRCKDPTG----PELLTYMHI-LYEACPYFKFGYESANGAIAEAVKNESF-----VHIID 339
Query: 293 IGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352
+S G QW +L+ AL R GGPP VR+T I + + F+ G Q L
Sbjct: 340 FQISQGGQWVSLIRALGARPGGPPN-VRITGI-------DDPRSSFA-RQGGLELVGQRL 390
Query: 353 G-FAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHL---NHSTPDERT 408
G A+ + + + + ++ + + E L V LHH+ + + + R
Sbjct: 391 GKLAEMCGVPFEFHGA-ALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRD 449
Query: 409 EFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEE 468
LR+++ L P V L E + N F F + + +S R+ +E
Sbjct: 450 RLLRLVKHLSPNVVTLVEQEANT---NTAPFLPRFVETMNHYLAVFESIDVKL-ARDHKE 505
Query: 469 RRVMEGEA-AKALTN--------RAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGRALL 519
R +E A+ + N R E +E KW R + LL
Sbjct: 506 RINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLL 565
Query: 520 RKYDNSWETRVEERDGCIELWWKGQPVSFCSLWK 553
Y + +EERDG + L WK QP+ W+
Sbjct: 566 ESYSEKYT--LEERDGALYLGWKNQPLITSCAWR 597
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 157 (60.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/202 (27%), Positives = 95/202 (47%)
Query: 299 VQWPTLLEALTRR-SGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKS 357
+Q PTL++++ + PPPL++LT+IA AE P +G + +L+ FA +
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAE----FHPPPLLGISYEELGSKLVNFATT 56
Query: 358 MNINLQINRLESHPLQDLSS--QMVSTSP---EETLIVCTQFRLHHLNHS--TPDERTEF 410
N+ ++ + S LSS + + P E L+V LH++ T + R+ F
Sbjct: 57 RNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVF 116
Query: 411 LRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERR 470
L+ LR L P V L + + D + N F + Y+W D T+ F R SE+R+
Sbjct: 117 LKELRDLNPTIVTLIDEDSDFTSTN---FISRLRSLYNYMWIPYD-TAEMFLTRGSEQRQ 172
Query: 471 VMEGEAAKALTNRAEMNEGKDK 492
E + + + N EG ++
Sbjct: 173 WYEADISWKIDN-VVAKEGAER 193
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 94/400 (23%), Positives = 155/400 (38%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
LL CA A+ + + R L + +S GD RLA + A
Sbjct: 227 LLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSN 286
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
K+ F P + AN SI + LA + LHI+D
Sbjct: 287 PFPSSTTSMVD----ILKAYKLFVHTCPIYVTDYFAANKSIYE-LAM----KATKLHIVD 337
Query: 293 IGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352
GV +G QWP LL AL++R GGPP ++R+T I + + F + +L
Sbjct: 338 FGVLYGFQWPCLLRALSKRPGGPP-MLRVTGI-------ELPQAGFRPSDRVEETGRRLK 389
Query: 353 GFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIV-CTQFRLHHLNHSTPDE----- 406
F N+ + N + + + ++ + +P ET +V C +H L + TPDE
Sbjct: 390 RFCDQFNVPFEFNFI-AKKWETITLDELMINPGETTVVNC----IHRLQY-TPDETVSLD 443
Query: 407 --RTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRV-EY--LWRFLDSTSAA- 460
R L++ R + P + +E N N F T F + Y L+ D+T A
Sbjct: 444 SPRDTVLKLFRDINPDLFVFAEIN---GMYNSPFFMTRFREALFHYSSLFDMFDTTIHAE 500
Query: 461 --FKGRESEERRVMEGEAAKALT----NRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDG 514
+K R ER ++ +A ++ R E +W R+ + +
Sbjct: 501 DEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKE 560
Query: 515 GRALLRK-YDNSWETRVEERDGCIELWWKGQPVSFCSLWK 553
+ ++RK Y + ++ + + WKG+ + S WK
Sbjct: 561 AKEIVRKRYHRDFV--IDSDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 124 (48.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/156 (25%), Positives = 61/156 (39%)
Query: 167 GRWAEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXX 226
G + LL CA + +G+L L L LASP GD R+AA+ A
Sbjct: 51 GLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSW 110
Query: 227 XXXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQ 286
+ L F++ P + N +IL+ + ++
Sbjct: 111 PGLYKALNATQTRTNNVSEEIHVRRL--FFEMFPILKVSYLLTNRAILEAMEGEKM---- 164
Query: 287 NLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLT 322
+H++D+ S QW LL+A R GPP L R+T
Sbjct: 165 -VHVIDLDASEPAQWLALLQAFNSRPEGPPHL-RIT 198
Score = 83 (34.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 407 RTE-FLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRF--LDSTSAAFKG 463
RT+ FL + L PK ++++E + D + G +T R +E L+ + L
Sbjct: 328 RTDSFLNAIWGLSPKVMVVTEQDSDHN----G--STLMERLLESLYTYAALFDCLETKVP 381
Query: 464 RESEER----RVMEGEAAKALTN-----RAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDG 514
R S++R +++ GE K + + R E +E +KW R+ A+
Sbjct: 382 RTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQ 441
Query: 515 GRALLRK--YDNSWETRVEERDGCIELWWKGQPVSFCSLWK 553
R LL+ +D R++E GC + W+ +P+ S W+
Sbjct: 442 ARRLLQGCGFDGY---RIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 157 (60.3 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 101/483 (20%), Positives = 179/483 (37%)
Query: 94 PPAPADSSKKRRNADDPRTRSSQSHHQRKNQG-RRISETEEGNEEGVIVKRSVXXXXXXX 152
P +S+++ R+ DD +S + K + E E EE ++V +
Sbjct: 126 PEVSEESTRRYRHRDDDEDDDLESGRKSKLPAISTVDELAEKFEEVLLVCQKNDQGEATE 185
Query: 153 XXXXXXXXXXXXXEGRWAEQ------LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDA 206
+ + ++Q LL CA A+ + + R L + E +S GDA
Sbjct: 186 KKTRHVKGSSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDA 245
Query: 207 NHRLAAHGLRAXXXXXXXXXXXXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPN 266
RL H A K+ F P
Sbjct: 246 TQRLGYHFAEALEARITGTMTTPISATSSRTSMVDIL------KAYKGFVQACPTLIMCY 299
Query: 267 NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAP 326
AN +I ++ ++ LHI+D G+ +G QWP L++AL++R GPP L+R+T I
Sbjct: 300 FTANRTINELASK-----ATTLHIIDFGILYGFQWPCLIQALSKRDIGPP-LLRVTGI-- 351
Query: 327 TAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEE 386
E Q+ P + +L F N+ + + + + +V S E
Sbjct: 352 --ELPQSGFRP---SERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGET 406
Query: 387 TLIVCTQFRLHHLNHSTPDE-------RTEFLRVLRSLEPKGVILSENNMDCSCGNCGDF 439
T++ C RL + TPDE R L++ R + P + +E N N F
Sbjct: 407 TVVNCI-LRLQY----TPDETVSLNSPRDTALKLFRDINPDLFVFAEIN---GTYNSPFF 458
Query: 440 ATGFARRVEY---LWRFLDST-SAAFKGRESEERRVMEGEAAKAL----TNRAEMNEGKD 491
T F + + L+ ++T S R ER ++ +A + + R E
Sbjct: 459 LTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYK 518
Query: 492 KWCDRMRXXXXXXXXXXEDAIDGGRALLR-KYDNSWETRVEERDGCIELWWKGQPVSFCS 550
+W R+ + + G+ +++ +Y + ++ + + WKG+ + S
Sbjct: 519 QWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFV--IDNDNHWMFQGWKGRVLYAVS 576
Query: 551 LWK 553
WK
Sbjct: 577 CWK 579
Score = 43 (20.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 60 NTGASSAAAPVNNTEA-TVNVSTISVRPTDSVVPGPPAPADS 100
+TG+ S P NN E+ T N T +S P+P +S
Sbjct: 15 DTGSGSCCKPRNNLESGTTNRFTCF---NESESQSNPSPTES 53
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 87/397 (21%), Positives = 148/397 (37%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
LL CA A++ + +L + E +SP G+ + RLA + +
Sbjct: 396 LLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTA 455
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
K+ + P+ AN S+++ A +HI+D
Sbjct: 456 LSSKKTSAAD-----MLKAYQTYMSVCPFKKAAIIFANHSMMRFTAN-----ANTIHIID 505
Query: 293 IGVSHGVQWPTLLEALT-RRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351
G+S+G QWP L+ L+ R GG P L R+T I + AE V G +L
Sbjct: 506 FGISYGFQWPALIHRLSLSRPGGSPKL-RITGIELPQRGFRPAE---GVQETGH----RL 557
Query: 352 LGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTP---DERT 408
+ + N+ + N + + + + + + E ++V + FR +L T R
Sbjct: 558 ARYCQRHNVPFEYNAI-AQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRD 616
Query: 409 EFLRVLRSLEPK---GVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRE 465
L+++R + P ILS N N F T F + + D + RE
Sbjct: 617 AVLKLIRKINPNVFIPAILSGNY------NAPFFVTRFREALFHYSAVFDMCDSKL-ARE 669
Query: 466 SEERRVMEGE---------AAKALTNRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGR 516
E R + E E A T R E E +W R+ ++ + +
Sbjct: 670 DEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLK 729
Query: 517 ALLRK-YDNSWETRVEERDGCIELWWKGQPVSFCSLW 552
+ YD +++ V++ + WKG+ V SLW
Sbjct: 730 LKIENGYDKNFD--VDQNGNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 103/398 (25%), Positives = 154/398 (38%)
Query: 173 LLNPCAAAITAGN----LTRVQHLLYVLHELASPTGDAN-HRLAAHGLRAXXXXXXXXXX 227
LL A A T N LTRV +L L +L SP N RLAAH
Sbjct: 107 LLVAAADASTGANKSRELTRV--ILARLKDLVSPGDRTNMERLAAHFTNGLSKLLERDSV 164
Query: 228 XXXXXXXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQN 287
F LL + SP+ F A +IL+ + +R
Sbjct: 165 LCPQQHRDDVYDQADVISAF---ELLQ--NMSPYVNFGYLTATQAILEAVKYERR----- 214
Query: 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPL-VRLTIIAPTAENDQNAETPFSVGPPGDN 346
+HI+D ++ GVQW +L++AL R+ GP +R+T ++ A N + + +V G
Sbjct: 215 IHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALS-RATNGKKSVA--AVQETGR- 270
Query: 347 YSLQLLGFAKSMN--INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTP 404
+L FA S+ + Q +L+++ S ++V E +I C L +H TP
Sbjct: 271 ---RLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRG--EAVVINC-MLHLPRFSHQTP 324
Query: 405 DERTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFK-- 462
FL ++L PK V L + GN G F F + DS A
Sbjct: 325 SSVISFLSEAKTLNPKLVTLVHEEVGLM-GNQG-FLYRFMDLLHQFSAIFDSLEAGLSIA 382
Query: 463 --GRESEERRVMEGEAAKALT----NRAEMNEGKDKWCDRMRXXXXXXXXXXEDAIDGGR 516
R ER + A LT N AE+ E W + +
Sbjct: 383 NPARGFVERVFIGPWVANWLTRITANDAEV-ESFASWPQWLETNGFKPLEVSFTNRCQAK 441
Query: 517 ALLRKYDNSWETRVEE--RDGCIELWWKGQPVSFCSLW 552
LL +++ + RVEE ++G + L WK + + S W
Sbjct: 442 LLLSLFNDGF--RVEELGQNGLV-LGWKSRRLVSASFW 476
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 62/245 (25%), Positives = 96/245 (39%)
Query: 173 LLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRAXXXXXXXXXXXXXXX 232
LL CA + +L LL + E+ SP G + R+ A+ +A
Sbjct: 43 LLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACS 102
Query: 233 XXXXXXXXXXXEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILD 292
+ F +L + SP F + AN +I Q L D + V HI+D
Sbjct: 103 PLSEKPLTVVQSQKIFS-ALQTYNSVSPLIKFSHFTANQAIFQAL--DGEDSV---HIID 156
Query: 293 IGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352
+ V G+QWP L L R P L + I + +D A T +L
Sbjct: 157 LDVMQGLQWPALFHILASR---PRKLRSIRITGFGSSSDLLAST-----------GRRLA 202
Query: 353 GFAKSMNINLQINRLES--HPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEF 410
FA S+N+ + + +E L D SQ+ + E ++ Q RL+ + + E E
Sbjct: 203 DFASSLNLPFEFHPIEGIIGNLID-PSQLATRQGEAVVVHWMQHRLYDVTGNNL-ETLEI 260
Query: 411 LRVLR 415
LR L+
Sbjct: 261 LRRLK 265
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 130 (50.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 69/305 (22%), Positives = 113/305 (37%)
Query: 254 NFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSG 313
+F + SP+ F N AN SIL+ + +++ HI+D V +G QW +L++ L G
Sbjct: 352 SFSETSPFLQFVNFTANQSILESCNESGFDRI---HIIDFDVGYGGQWSSLMQELASGVG 408
Query: 314 GP----PPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLES 369
G ++LT+ AP F + +N L FA + I +I L
Sbjct: 409 GRRRNRASSLKLTVFAPPPST---VSDEFELRFTEEN----LKTFAGEVKIPFEIELLSV 461
Query: 370 HPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNM 429
L + + +S E + + N LR L+ L P V+ S+
Sbjct: 462 ELLLNPAYWPLSLRSSEKEAIAVNLPV---NSVASGYLPLILRFLKQLSPNIVVCSDRGC 518
Query: 430 DCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESE-ERRVMEGEAAKALTNRAEMNE 488
D N F ++Y L+S A +S ER ++ K L R E
Sbjct: 519 D---RNDAPFPNAVIHSLQYHTSLLESLDANQNQDDSSIERFWVQPSIEKLLMKRHRWIE 575
Query: 489 GKDKWCDRMRXXXXXXXXXXEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQPVSF 548
W + A LL++ + VE+R + + W+ + +
Sbjct: 576 RSPPWRILFTQCGFSPASLSQMAEAQAECLLQR-NPVRGFHVEKRQSSLVMCWQRKELVT 634
Query: 549 CSLWK 553
S WK
Sbjct: 635 VSAWK 639
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 62/250 (24%), Positives = 102/250 (40%)
Query: 255 FYDKSPWFAFPNNIANSSILQILAQ-DRHNQVQNLHILDIGVSHGVQWPTLLEALT--RR 311
F + SP+ F N AN +IL+ DR +HI+D + +G QW +L++ L R
Sbjct: 333 FSETSPFLQFVNFTANQTILESFEGFDR------IHIVDFDIGYGGQWASLIQELAGKRN 386
Query: 312 SGGPPPLVRLTIIA-PTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESH 370
P +++T A P+ +D+ F + +N L FA ++ +I L
Sbjct: 387 RSSSAPSLKITAFASPSTVSDE-----FELRFTEEN----LRSFAGETGVSFEIELLNME 437
Query: 371 PLQDLSSQMVS---TSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427
L + + +S +S +E + V ++ LR L+ + P V+ S+
Sbjct: 438 ILLNPTYWPLSLFRSSEKEAIAVNLP-----ISSMVSGYLPLILRFLKQISPNVVVCSDR 492
Query: 428 NMDCSCGNCGDFATGFARRVEYLWRFLDST-SAAFKGRE---SEERRVMEGEAAKALTNR 483
+ C N F G ++Y L+S S E S ER ++ K LTNR
Sbjct: 493 S--CDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNR 550
Query: 484 AEMNEGKDKW 493
E W
Sbjct: 551 YRWMERSPPW 560
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 40/137 (29%), Positives = 65/137 (47%)
Query: 254 NFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSG 313
+F + SP F N +N ++L+ H LHI+D + +G QW +L++ L R
Sbjct: 278 SFSEISPVLQFANFTSNQALLESF----HG-FHRLHIIDFDIGYGGQWASLMQELVLRDN 332
Query: 314 GPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQ 373
P +++T+ A A +DQ +G DN L FA +NI+L I L L
Sbjct: 333 AAPLSLKITVFASPANHDQ-----LELGFTQDN----LKHFASEINISLDIQVLSLDLLG 383
Query: 374 DLSSQMVSTSPEETLIV 390
+S ++S +E + V
Sbjct: 384 SIS--WPNSSEKEAVAV 398
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 561 505 0.00086 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 626 (67 KB)
Total size of DFA: 329 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 47.57u 0.08s 47.65t Elapsed: 00:00:31
Total cpu time: 47.58u 0.08s 47.66t Elapsed: 00:00:33
Start: Fri May 10 02:01:35 2013 End: Fri May 10 02:02:08 2013