Query 008559
Match_columns 561
No_of_seqs 149 out of 720
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 06:23:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.7 0.00081 2.8E-08 66.8 15.7 167 288-506 72-241 (261)
2 1vl5_A Unknown conserved prote 96.8 0.054 1.8E-06 52.1 17.1 110 272-425 28-138 (260)
3 3dtn_A Putative methyltransfer 96.6 0.018 6.3E-07 54.3 12.6 176 271-507 33-211 (234)
4 3mgg_A Methyltransferase; NYSG 96.6 0.072 2.5E-06 51.6 16.4 101 288-426 39-141 (276)
5 3dp7_A SAM-dependent methyltra 96.3 0.076 2.6E-06 54.6 15.8 107 288-430 181-291 (363)
6 1xxl_A YCGJ protein; structura 96.3 0.2 6.8E-06 47.8 17.7 116 270-429 10-127 (239)
7 3dh0_A SAM dependent methyltra 96.3 0.2 6.9E-06 46.5 17.4 113 271-425 27-141 (219)
8 2r3s_A Uncharacterized protein 96.2 0.11 3.7E-06 51.9 16.0 116 272-430 154-275 (335)
9 3dlc_A Putative S-adenosyl-L-m 96.2 0.066 2.2E-06 49.3 13.4 100 288-426 45-147 (219)
10 3sm3_A SAM-dependent methyltra 96.2 0.061 2.1E-06 50.2 13.1 101 288-425 32-139 (235)
11 3bkx_A SAM-dependent methyltra 96.1 0.19 6.6E-06 48.4 16.6 124 272-430 34-163 (275)
12 3hnr_A Probable methyltransfer 95.8 0.099 3.4E-06 48.7 12.3 43 270-327 34-76 (220)
13 3h2b_A SAM-dependent methyltra 95.7 0.12 3.9E-06 47.7 12.5 97 288-426 43-140 (203)
14 1x19_A CRTF-related protein; m 95.7 0.25 8.4E-06 50.3 16.0 116 271-430 180-299 (359)
15 3f4k_A Putative methyltransfer 95.7 0.45 1.5E-05 45.2 16.9 128 255-426 19-149 (257)
16 3mcz_A O-methyltransferase; ad 95.7 0.14 4.7E-06 51.8 13.9 107 288-430 181-291 (352)
17 4a6d_A Hydroxyindole O-methylt 95.6 0.13 4.4E-06 52.9 13.7 117 271-430 169-287 (353)
18 2aot_A HMT, histamine N-methyl 95.6 0.12 4.1E-06 51.0 12.7 117 287-426 53-171 (292)
19 1qzz_A RDMB, aclacinomycin-10- 95.5 0.19 6.6E-06 51.1 14.5 101 288-427 184-288 (374)
20 3ujc_A Phosphoethanolamine N-m 95.4 0.17 5.9E-06 48.1 12.8 120 261-426 35-158 (266)
21 3bus_A REBM, methyltransferase 95.3 0.47 1.6E-05 45.6 15.6 99 288-425 63-164 (273)
22 1kpg_A CFA synthase;, cyclopro 95.1 0.13 4.5E-06 50.1 11.3 100 288-425 66-166 (287)
23 4htf_A S-adenosylmethionine-de 95.0 0.13 4.6E-06 50.1 11.1 101 288-427 70-173 (285)
24 3ccf_A Cyclopropane-fatty-acyl 95.0 0.19 6.4E-06 49.0 12.1 107 271-427 47-154 (279)
25 1tw3_A COMT, carminomycin 4-O- 95.0 0.45 1.5E-05 48.1 15.3 102 288-428 185-290 (360)
26 1ve3_A Hypothetical protein PH 95.0 0.13 4.6E-06 47.8 10.4 101 288-426 40-141 (227)
27 3gu3_A Methyltransferase; alph 94.9 0.66 2.3E-05 45.4 15.7 104 287-428 23-128 (284)
28 3jwg_A HEN1, methyltransferase 94.8 0.25 8.7E-06 46.0 11.9 119 271-430 19-144 (219)
29 2fk8_A Methoxy mycolic acid sy 94.7 0.47 1.6E-05 47.1 14.1 98 288-425 92-192 (318)
30 3p9c_A Caffeic acid O-methyltr 94.7 0.53 1.8E-05 48.4 14.9 98 288-430 203-302 (364)
31 3vc1_A Geranyl diphosphate 2-C 94.6 0.79 2.7E-05 45.5 15.6 98 288-425 119-219 (312)
32 3gwz_A MMCR; methyltransferase 94.6 0.6 2.1E-05 47.9 15.0 104 288-430 204-311 (369)
33 3htx_A HEN1; HEN1, small RNA m 94.5 0.23 7.9E-06 57.6 12.5 125 271-430 711-838 (950)
34 3m70_A Tellurite resistance pr 94.4 0.59 2E-05 45.5 14.0 112 271-426 110-222 (286)
35 3reo_A (ISO)eugenol O-methyltr 94.4 0.44 1.5E-05 49.0 13.6 99 287-430 204-304 (368)
36 3jwh_A HEN1; methyltransferase 94.3 0.47 1.6E-05 44.2 12.5 117 271-428 19-142 (217)
37 3ege_A Putative methyltransfer 94.0 0.36 1.2E-05 46.6 11.3 109 271-430 24-134 (261)
38 2p7i_A Hypothetical protein; p 93.7 0.52 1.8E-05 44.0 11.4 107 271-426 31-140 (250)
39 1xtp_A LMAJ004091AAA; SGPP, st 93.6 0.33 1.1E-05 46.0 9.9 114 271-427 83-197 (254)
40 3kkz_A Uncharacterized protein 93.5 1.2 4.2E-05 42.7 14.1 129 254-426 18-149 (267)
41 3e8s_A Putative SAM dependent 93.4 1.1 3.9E-05 41.1 13.1 45 268-327 39-83 (227)
42 3i53_A O-methyltransferase; CO 93.4 0.69 2.4E-05 46.4 12.5 105 287-430 170-278 (332)
43 2p35_A Trans-aconitate 2-methy 93.4 0.43 1.5E-05 45.3 10.5 97 288-427 35-132 (259)
44 2ip2_A Probable phenazine-spec 93.2 0.78 2.7E-05 45.8 12.6 106 288-430 169-276 (334)
45 3ocj_A Putative exported prote 93.2 0.95 3.3E-05 44.8 13.1 105 288-427 120-227 (305)
46 1nkv_A Hypothetical protein YJ 93.2 1.3 4.5E-05 41.9 13.6 112 269-425 24-138 (256)
47 3ou2_A SAM-dependent methyltra 93.1 0.74 2.5E-05 42.3 11.3 110 270-426 34-145 (218)
48 2o57_A Putative sarcosine dime 92.9 1.3 4.3E-05 43.3 13.3 103 288-429 84-190 (297)
49 3hem_A Cyclopropane-fatty-acyl 92.8 0.85 2.9E-05 44.9 11.9 104 288-426 74-182 (302)
50 1fp1_D Isoliquiritigenin 2'-O- 92.7 1.7 5.8E-05 44.4 14.4 97 288-429 211-309 (372)
51 3ofk_A Nodulation protein S; N 92.6 1.9 6.5E-05 39.7 13.4 101 288-427 53-154 (216)
52 2xvm_A Tellurite resistance pr 92.5 1.6 5.5E-05 39.3 12.5 112 270-425 21-134 (199)
53 1fp2_A Isoflavone O-methyltran 92.2 1.3 4.4E-05 44.9 12.6 31 288-326 190-220 (352)
54 3e23_A Uncharacterized protein 92.1 0.72 2.5E-05 42.6 9.9 95 288-426 45-140 (211)
55 1y8c_A S-adenosylmethionine-de 91.2 1.8 6.3E-05 40.3 11.7 114 271-427 25-142 (246)
56 4fsd_A Arsenic methyltransfera 90.9 1.1 3.9E-05 46.1 10.7 115 288-430 85-207 (383)
57 1wzn_A SAM-dependent methyltra 90.5 2.7 9.3E-05 39.7 12.3 101 288-427 43-145 (252)
58 1zg3_A Isoflavanone 4'-O-methy 90.5 2.5 8.5E-05 42.9 12.7 32 288-327 195-226 (358)
59 3g5t_A Trans-aconitate 3-methy 90.5 3.4 0.00012 40.4 13.4 105 288-425 38-147 (299)
60 3lst_A CALO1 methyltransferase 90.3 0.9 3.1E-05 46.0 9.2 112 272-430 175-290 (348)
61 3l8d_A Methyltransferase; stru 90.3 2.9 9.8E-05 39.1 12.1 97 288-427 55-153 (242)
62 3g5l_A Putative S-adenosylmeth 89.7 3.2 0.00011 39.3 12.1 96 288-426 46-144 (253)
63 4e2x_A TCAB9; kijanose, tetron 89.7 0.4 1.4E-05 49.7 6.2 99 288-427 109-208 (416)
64 2vdw_A Vaccinia virus capping 89.1 2.5 8.6E-05 42.4 11.3 108 288-425 50-167 (302)
65 3bkw_A MLL3908 protein, S-aden 88.8 4.2 0.00014 37.8 12.0 109 270-426 32-143 (243)
66 1vlm_A SAM-dependent methyltra 88.2 5 0.00017 37.2 12.1 23 486-508 164-186 (219)
67 3mq2_A 16S rRNA methyltransfer 88.1 1.3 4.4E-05 41.2 7.8 117 273-427 19-140 (218)
68 3lcc_A Putative methyl chlorid 87.9 5.7 0.00019 37.1 12.3 115 269-425 52-169 (235)
69 2yqz_A Hypothetical protein TT 87.5 7.3 0.00025 36.6 12.9 99 288-426 41-140 (263)
70 2qe6_A Uncharacterized protein 87.4 2.7 9.2E-05 41.4 10.1 135 253-426 45-195 (274)
71 3d2l_A SAM-dependent methyltra 87.3 3.7 0.00013 38.2 10.6 101 288-427 35-137 (243)
72 3p9n_A Possible methyltransfer 87.2 2.7 9.4E-05 38.1 9.4 107 288-430 46-156 (189)
73 3u81_A Catechol O-methyltransf 87.1 1.6 5.5E-05 40.9 8.0 111 288-430 60-173 (221)
74 1ri5_A MRNA capping enzyme; me 87.1 3.8 0.00013 39.4 10.9 108 288-427 66-174 (298)
75 3r0q_C Probable protein argini 87.1 4.3 0.00015 41.8 11.9 121 270-427 48-169 (376)
76 3fzg_A 16S rRNA methylase; met 86.6 1.1 3.6E-05 43.5 6.3 102 288-427 51-152 (200)
77 3bgv_A MRNA CAP guanine-N7 met 86.6 4.3 0.00015 40.1 11.1 113 288-426 36-154 (313)
78 2ex4_A Adrenal gland protein A 86.5 3.5 0.00012 38.9 10.0 125 269-430 62-189 (241)
79 3i9f_A Putative type 11 methyl 86.5 4.6 0.00016 35.6 10.2 102 273-426 9-111 (170)
80 3pfg_A N-methyltransferase; N, 86.4 2.9 9.9E-05 39.9 9.5 97 288-426 52-150 (263)
81 2p8j_A S-adenosylmethionine-de 86.3 3.7 0.00013 37.3 9.8 103 288-427 25-128 (209)
82 3frh_A 16S rRNA methylase; met 86.2 0.98 3.3E-05 45.2 6.1 100 288-427 107-206 (253)
83 2y1w_A Histone-arginine methyl 86.0 4.4 0.00015 41.2 11.1 114 271-425 40-153 (348)
84 3q7e_A Protein arginine N-meth 85.4 5.1 0.00018 40.8 11.3 102 288-426 68-172 (349)
85 4hg2_A Methyltransferase type 84.7 7.2 0.00025 38.2 11.6 93 288-426 41-134 (257)
86 3dli_A Methyltransferase; PSI- 84.6 1.7 5.9E-05 41.0 6.8 96 288-426 43-139 (240)
87 3thr_A Glycine N-methyltransfe 83.8 2.4 8.1E-05 41.1 7.6 123 271-426 47-174 (293)
88 3lcv_B Sisomicin-gentamicin re 83.7 2.6 8.8E-05 42.7 7.9 124 288-458 134-259 (281)
89 3hm2_A Precorrin-6Y C5,15-meth 83.7 13 0.00044 32.6 11.9 111 271-426 15-126 (178)
90 1pjz_A Thiopurine S-methyltran 83.6 6.4 0.00022 36.5 10.2 31 288-328 24-54 (203)
91 3g2m_A PCZA361.24; SAM-depende 83.2 5.8 0.0002 38.8 10.2 100 289-427 85-190 (299)
92 4dcm_A Ribosomal RNA large sub 83.0 6.2 0.00021 40.9 10.8 124 267-429 208-336 (375)
93 1dus_A MJ0882; hypothetical pr 82.9 12 0.00042 32.9 11.4 116 269-429 40-159 (194)
94 3cc8_A Putative methyltransfer 82.5 13 0.00045 33.8 11.8 106 271-426 23-129 (230)
95 1g6q_1 HnRNP arginine N-methyl 82.4 11 0.00036 38.0 12.0 115 271-425 28-143 (328)
96 1zx0_A Guanidinoacetate N-meth 82.0 9.3 0.00032 35.9 10.8 104 288-425 62-168 (236)
97 3p2e_A 16S rRNA methylase; met 81.1 3.8 0.00013 39.1 7.8 106 288-425 26-137 (225)
98 2g72_A Phenylethanolamine N-me 80.3 6.4 0.00022 38.3 9.2 42 384-426 172-214 (289)
99 2gb4_A Thiopurine S-methyltran 79.7 15 0.00053 35.6 11.7 30 288-327 70-99 (252)
100 2yxd_A Probable cobalt-precorr 79.3 18 0.00063 31.5 11.2 105 272-427 26-131 (183)
101 3ftd_A Dimethyladenosine trans 77.3 8.4 0.00029 37.5 9.0 119 267-429 13-133 (249)
102 3giw_A Protein of unknown func 77.1 13 0.00044 37.5 10.4 145 249-425 42-198 (277)
103 2gs9_A Hypothetical protein TT 76.9 15 0.0005 33.5 10.1 93 288-426 38-131 (211)
104 3b3j_A Histone-arginine methyl 76.8 5.6 0.00019 42.7 8.2 116 271-427 148-263 (480)
105 1yzh_A TRNA (guanine-N(7)-)-me 76.8 29 0.001 31.8 12.3 109 288-428 43-157 (214)
106 3e05_A Precorrin-6Y C5,15-meth 76.7 27 0.00093 31.6 11.9 110 271-426 30-141 (204)
107 3bxo_A N,N-dimethyltransferase 76.6 11 0.00036 35.0 9.2 97 288-426 42-140 (239)
108 3eey_A Putative rRNA methylase 76.3 24 0.00081 31.7 11.3 111 288-426 24-138 (197)
109 3grz_A L11 mtase, ribosomal pr 75.4 18 0.00061 32.9 10.3 114 266-426 43-158 (205)
110 3cgg_A SAM-dependent methyltra 74.9 28 0.00095 30.6 11.2 41 271-327 37-77 (195)
111 2pjd_A Ribosomal RNA small sub 74.4 5.5 0.00019 40.3 7.0 120 269-428 184-304 (343)
112 3ggd_A SAM-dependent methyltra 73.4 2.9 9.9E-05 39.4 4.4 107 288-430 58-167 (245)
113 3iv6_A Putative Zn-dependent a 73.0 6.7 0.00023 38.9 7.1 41 272-327 36-76 (261)
114 3uwp_A Histone-lysine N-methyl 73.0 8.8 0.0003 41.2 8.4 119 271-425 163-286 (438)
115 3dmg_A Probable ribosomal RNA 72.8 49 0.0017 34.2 13.9 127 269-430 215-343 (381)
116 2fyt_A Protein arginine N-meth 72.2 34 0.0012 34.5 12.4 97 288-424 66-168 (340)
117 4azs_A Methyltransferase WBDD; 72.0 4.6 0.00016 44.1 6.2 107 288-430 68-178 (569)
118 3dxy_A TRNA (guanine-N(7)-)-me 70.4 16 0.00056 34.4 8.9 113 288-430 36-153 (218)
119 3tfw_A Putative O-methyltransf 69.9 16 0.00056 34.9 8.9 106 288-430 65-173 (248)
120 2kw5_A SLR1183 protein; struct 68.5 32 0.0011 30.9 10.2 99 289-427 32-131 (202)
121 4hc4_A Protein arginine N-meth 67.6 21 0.00071 37.3 9.7 101 288-424 85-186 (376)
122 3g07_A 7SK snRNA methylphospha 67.3 9.7 0.00033 37.4 6.8 33 288-328 48-80 (292)
123 3njr_A Precorrin-6Y methylase; 66.9 74 0.0025 29.2 12.6 106 271-427 45-154 (204)
124 2avn_A Ubiquinone/menaquinone 66.9 32 0.0011 32.6 10.3 30 288-327 56-85 (260)
125 2esr_A Methyltransferase; stru 66.4 13 0.00045 32.8 7.0 104 288-430 33-141 (177)
126 1dl5_A Protein-L-isoaspartate 64.1 50 0.0017 32.7 11.4 45 271-327 65-109 (317)
127 3lbf_A Protein-L-isoaspartate 64.0 56 0.0019 29.5 11.0 106 272-427 68-174 (210)
128 1jsx_A Glucose-inhibited divis 63.6 45 0.0015 30.0 10.2 98 288-428 67-166 (207)
129 2i62_A Nicotinamide N-methyltr 63.3 20 0.00067 33.7 7.9 42 385-427 156-198 (265)
130 1nv8_A HEMK protein; class I a 63.0 35 0.0012 33.6 10.0 112 288-430 125-252 (284)
131 2fpo_A Methylase YHHF; structu 62.2 19 0.00065 33.1 7.5 104 288-430 56-163 (202)
132 2fca_A TRNA (guanine-N(7)-)-me 61.9 46 0.0016 30.8 10.1 33 288-328 40-72 (213)
133 1ws6_A Methyltransferase; stru 60.9 14 0.00048 32.1 6.0 30 288-327 43-72 (171)
134 2yxe_A Protein-L-isoaspartate 60.8 57 0.0019 29.6 10.4 44 272-327 68-111 (215)
135 3mti_A RRNA methylase; SAM-dep 56.1 40 0.0014 29.9 8.3 31 288-328 24-54 (185)
136 2gpy_A O-methyltransferase; st 56.1 71 0.0024 29.5 10.4 102 288-427 56-160 (233)
137 3lpm_A Putative methyltransfer 54.9 81 0.0028 29.9 10.8 113 288-428 51-177 (259)
138 1zq9_A Probable dimethyladenos 54.8 46 0.0016 32.6 9.2 30 288-327 30-59 (285)
139 3orh_A Guanidinoacetate N-meth 54.7 19 0.00065 34.2 6.2 101 288-425 62-168 (236)
140 3tqs_A Ribosomal RNA small sub 54.4 59 0.002 31.7 9.8 40 273-327 21-60 (255)
141 2jjq_A Uncharacterized RNA met 54.3 1.7E+02 0.0057 30.7 13.9 95 288-426 292-386 (425)
142 1wy7_A Hypothetical protein PH 53.7 1.2E+02 0.0042 27.1 13.1 91 288-418 51-141 (207)
143 3fut_A Dimethyladenosine trans 53.2 24 0.00081 35.0 6.7 66 251-328 12-78 (271)
144 2b3t_A Protein methyltransfera 53.0 74 0.0025 30.5 10.2 32 288-327 111-142 (276)
145 2ift_A Putative methylase HI07 52.8 1.3E+02 0.0046 27.2 11.6 105 288-430 55-166 (201)
146 1xdz_A Methyltransferase GIDB; 51.6 57 0.0019 30.5 8.9 98 288-426 72-173 (240)
147 3g89_A Ribosomal RNA small sub 50.8 32 0.0011 33.1 7.2 100 288-426 82-183 (249)
148 2pxx_A Uncharacterized protein 50.1 65 0.0022 28.7 8.8 31 288-327 44-74 (215)
149 2a14_A Indolethylamine N-methy 49.8 78 0.0027 30.1 9.8 41 385-426 155-196 (263)
150 3tr6_A O-methyltransferase; ce 49.8 55 0.0019 29.9 8.4 104 288-429 66-176 (225)
151 3duw_A OMT, O-methyltransferas 49.7 92 0.0032 28.4 9.9 105 288-430 60-170 (223)
152 2nxc_A L11 mtase, ribosomal pr 49.1 37 0.0012 32.6 7.3 49 267-328 104-152 (254)
153 2fhp_A Methylase, putative; al 48.5 27 0.00091 30.8 5.7 105 288-430 46-157 (187)
154 1uwv_A 23S rRNA (uracil-5-)-me 48.1 1.5E+02 0.005 30.9 12.2 99 288-426 288-388 (433)
155 2ipx_A RRNA 2'-O-methyltransfe 46.8 98 0.0034 28.6 9.7 100 288-426 79-181 (233)
156 3id6_C Fibrillarin-like rRNA/T 46.5 1.2E+02 0.0042 29.1 10.6 100 288-426 78-180 (232)
157 3b5i_A S-adenosyl-L-methionine 46.0 2.4E+02 0.0083 29.2 13.4 43 286-328 52-101 (374)
158 2ozv_A Hypothetical protein AT 46.0 50 0.0017 31.7 7.7 115 288-430 38-173 (260)
159 1vbf_A 231AA long hypothetical 45.6 99 0.0034 28.3 9.5 41 272-327 61-101 (231)
160 2avd_A Catechol-O-methyltransf 44.3 87 0.003 28.6 8.9 34 288-328 71-104 (229)
161 1i1n_A Protein-L-isoaspartate 43.3 1.7E+02 0.0057 26.6 10.6 47 272-328 66-112 (226)
162 2qm3_A Predicted methyltransfe 43.3 1.3E+02 0.0045 30.4 10.8 96 288-421 174-271 (373)
163 3fpf_A Mtnas, putative unchara 43.1 1.8E+02 0.0061 29.3 11.5 33 288-328 124-156 (298)
164 2vdv_E TRNA (guanine-N(7)-)-me 42.6 1.8E+02 0.006 27.2 10.9 33 288-328 51-83 (246)
165 3tm4_A TRNA (guanine N2-)-meth 42.5 1.5E+02 0.0052 30.0 11.1 106 288-425 219-329 (373)
166 2h1r_A Dimethyladenosine trans 41.7 63 0.0022 31.9 7.8 30 288-327 44-73 (299)
167 2zfu_A Nucleomethylin, cerebra 40.2 76 0.0026 28.7 7.6 38 272-327 57-95 (215)
168 4dzr_A Protein-(glutamine-N5) 40.0 11 0.00036 34.1 1.7 33 288-328 32-64 (215)
169 3ckk_A TRNA (guanine-N(7)-)-me 39.8 1.6E+02 0.0055 27.8 10.2 33 288-328 48-80 (235)
170 3tma_A Methyltransferase; thum 39.8 78 0.0027 31.7 8.3 107 288-425 205-315 (354)
171 3gru_A Dimethyladenosine trans 39.7 1.8E+02 0.0061 29.0 10.8 59 259-328 23-82 (295)
172 3ntv_A MW1564 protein; rossman 39.1 63 0.0022 30.2 7.1 103 288-429 73-178 (232)
173 3uzu_A Ribosomal RNA small sub 38.4 42 0.0014 33.3 5.9 50 267-327 24-77 (279)
174 3evz_A Methyltransferase; NYSG 36.9 2.3E+02 0.008 25.6 10.5 106 288-426 57-178 (230)
175 1qam_A ERMC' methyltransferase 36.8 2.8E+02 0.0094 26.2 12.0 51 266-327 11-61 (244)
176 3m33_A Uncharacterized protein 36.1 1E+02 0.0034 28.5 7.9 30 288-327 50-79 (226)
177 1u2z_A Histone-lysine N-methyl 36.1 53 0.0018 34.9 6.5 119 271-426 232-358 (433)
178 1l3i_A Precorrin-6Y methyltran 35.0 2.2E+02 0.0074 24.5 11.4 41 272-327 24-64 (192)
179 3gdh_A Trimethylguanosine synt 34.6 2.7E+02 0.0092 25.5 11.5 53 288-367 80-134 (241)
180 1o54_A SAM-dependent O-methylt 32.7 1.4E+02 0.0049 28.4 8.6 44 272-327 103-146 (277)
181 1p91_A Ribosomal RNA large sub 32.4 3E+02 0.01 25.7 10.7 32 288-327 87-118 (269)
182 3a27_A TYW2, uncharacterized p 30.9 1.3E+02 0.0045 29.0 8.0 96 288-425 121-217 (272)
183 1fbn_A MJ fibrillarin homologu 30.7 2.9E+02 0.01 25.3 10.2 32 288-327 76-107 (230)
184 1xj5_A Spermidine synthase 1; 30.7 1.2E+02 0.004 30.8 7.9 115 288-430 122-238 (334)
185 3ghf_A Septum site-determining 30.4 84 0.0029 27.4 5.8 48 290-362 51-99 (120)
186 3mb5_A SAM-dependent methyltra 29.6 2E+02 0.0068 26.7 8.9 44 272-327 84-127 (255)
187 1inl_A Spermidine synthase; be 27.7 1.8E+02 0.0062 28.5 8.5 136 288-457 92-229 (296)
188 2ksn_A Ubiquitin domain-contai 27.4 74 0.0025 28.8 4.9 38 168-206 56-93 (137)
189 1sui_A Caffeoyl-COA O-methyltr 26.5 2.5E+02 0.0086 26.5 9.1 104 288-429 81-192 (247)
190 1af7_A Chemotaxis receptor met 26.4 98 0.0034 30.5 6.2 41 288-328 107-147 (274)
191 2pt6_A Spermidine synthase; tr 25.3 88 0.003 31.4 5.7 32 288-327 118-149 (321)
192 1jg1_A PIMT;, protein-L-isoasp 25.3 3.3E+02 0.011 25.0 9.5 43 271-327 81-123 (235)
193 3r3h_A O-methyltransferase, SA 25.3 1.2E+02 0.004 28.8 6.4 35 288-329 62-96 (242)
194 3bzb_A Uncharacterized protein 25.1 4.6E+02 0.016 25.1 11.5 30 288-326 81-110 (281)
195 1ixk_A Methyltransferase; open 24.9 4.1E+02 0.014 26.1 10.6 64 269-361 106-169 (315)
196 2pbf_A Protein-L-isoaspartate 24.6 3.9E+02 0.013 24.1 9.9 50 271-328 68-119 (227)
197 2yxl_A PH0851 protein, 450AA l 24.2 6.1E+02 0.021 26.2 12.4 66 270-364 248-314 (450)
198 2hnk_A SAM-dependent O-methylt 24.1 3.9E+02 0.013 24.5 9.8 33 288-327 62-94 (239)
199 2o07_A Spermidine synthase; st 23.7 1.9E+02 0.0063 28.7 7.7 135 288-457 97-233 (304)
200 2bm8_A Cephalosporin hydroxyla 23.3 3.7E+02 0.013 25.1 9.6 38 288-329 83-120 (236)
201 3q87_B N6 adenine specific DNA 22.4 1.2E+02 0.004 26.8 5.5 30 288-328 25-54 (170)
202 3sso_A Methyltransferase; macr 22.3 6.4E+02 0.022 26.7 11.8 62 254-328 189-257 (419)
203 3adn_A Spermidine synthase; am 21.7 5.4E+02 0.018 25.2 10.7 134 288-458 85-223 (294)
204 1yb2_A Hypothetical protein TA 21.4 2.9E+02 0.0099 26.2 8.4 33 288-327 112-144 (275)
205 1iy9_A Spermidine synthase; ro 21.3 5.1E+02 0.018 24.8 10.3 134 288-456 77-212 (275)
206 1ne2_A Hypothetical protein TA 20.9 2.9E+02 0.0098 24.5 7.9 31 288-327 53-83 (200)
207 1sqg_A SUN protein, FMU protei 20.7 3.7E+02 0.013 27.6 9.7 123 269-425 234-372 (429)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.68 E-value=0.00081 Score=66.81 Aligned_cols=167 Identities=17% Similarity=0.273 Sum_probs=89.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+++- +.| -.+||||+.+.. -++.+.+++ +..+..-.+..+
T Consensus 72 ~~vLDlGcGtG~----~~~~la~~~-~~~-~~~v~gvD~s~~-------------ml~~A~~~~----~~~~~~~~v~~~ 128 (261)
T 4gek_A 72 TQVYDLGCSLGA----ATLSVRRNI-HHD-NCKIIAIDNSPA-------------MIERCRRHI----DAYKAPTPVDVI 128 (261)
T ss_dssp CEEEEETCTTTH----HHHHHHHTC-CSS-SCEEEEEESCHH-------------HHHHHHHHH----HTSCCSSCEEEE
T ss_pred CEEEEEeCCCCH----HHHHHHHhc-CCC-CCEEEEEECCHH-------------HHHHHHHHH----HhhccCceEEEe
Confidence 689999999984 556677663 334 589999987532 123333333 334433222223
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-EeccCCCCCCCCCChhhHHHH
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SENNMDCSCGNCGDFATGFAR 445 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ead~~~~n~~~F~~RF~e 445 (561)
.. .+.++. ..+-.+ |-|.+.|||+.+ ..+..+|+.| |.|+|..+++ +|.-.. ..+.+...+.
T Consensus 129 ~~-D~~~~~-----~~~~d~--v~~~~~l~~~~~---~~~~~~l~~i~~~LkpGG~lii~e~~~~----~~~~~~~~~~- 192 (261)
T 4gek_A 129 EG-DIRDIA-----IENASM--VVLNFTLQFLEP---SERQALLDKIYQGLNPGGALVLSEKFSF----EDAKVGELLF- 192 (261)
T ss_dssp ES-CTTTCC-----CCSEEE--EEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEEEBCC----SSHHHHHHHH-
T ss_pred ec-cccccc-----cccccc--ceeeeeeeecCc---hhHhHHHHHHHHHcCCCcEEEEEeccCC----CCHHHHHHHH-
Confidence 33 344333 222233 345567899864 3567788877 5599997655 565433 2222222222
Q ss_pred HHHHHHHHHhhhhhhcCCCC-hHHhhhheeeeecccccccccccChHHHHHHHhcCCCcccc
Q 008559 446 RVEYLWRFLDSTSAAFKGRE-SEERRVMEGEAAKALTNRAEMNEGKDKWCDRMRGVGFVGDV 506 (561)
Q Consensus 446 aL~yY~alfDSLdaa~~~r~-s~eR~~iEivA~EG~~Rv~ER~E~~~~Wr~Rm~~AGF~~vp 506 (561)
.+.+.+.... .+.+.+ ...|.. ++++ -++.+.+.++.+|+.|||..+.
T Consensus 193 ~~~~~~~~~~----g~s~~ei~~~~~~--------l~~~-~~~~s~~~~~~~L~~AGF~~ve 241 (261)
T 4gek_A 193 NMHHDFKRAN----GYSELEISQKRSM--------LENV-MLTDSVETHKARLHKAGFEHSE 241 (261)
T ss_dssp HHHHHHHHHT----TGGGSTTHHHHHH--------HHHH-CCCBCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHc----CCCHHHHHHHHhh--------hccc-ccCCCHHHHHHHHHHcCCCeEE
Confidence 1211111111 111111 111222 2344 5567888999999999998764
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.77 E-value=0.054 Score=52.13 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=64.2
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHH
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL 351 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+.+- + ++|||+.... .-...
T Consensus 28 ~l~~~l~~~~~-----~~vLDiGcG~G~----~~~~l~~~~--~----~v~gvD~s~~-----------------~l~~a 75 (260)
T 1vl5_A 28 KLMQIAALKGN-----EEVLDVATGGGH----VANAFAPFV--K----KVVAFDLTED-----------------ILKVA 75 (260)
T ss_dssp HHHHHHTCCSC-----CEEEEETCTTCH----HHHHHGGGS--S----EEEEEESCHH-----------------HHHHH
T ss_pred HHHHHhCCCCC-----CEEEEEeCCCCH----HHHHHHHhC--C----EEEEEeCCHH-----------------HHHHH
Confidence 34555544444 789999999885 556677662 1 8999987532 22333
Q ss_pred HHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEE
Q 008559 352 LGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS 425 (561)
Q Consensus 352 ~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlv 425 (561)
.+.++..|++ ++|... +++++ ...++..=+|-|.+.|||+.+ +...+-+..|-|+|...+++
T Consensus 76 ~~~~~~~~~~~v~~~~~---d~~~l-----~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 76 RAFIEGNGHQQVEYVQG---DAEQM-----PFTDERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp HHHHHHTTCCSEEEEEC---CC-CC-----CSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHhcCCCceEEEEe---cHHhC-----CCCCCCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 3444445554 444432 33333 233344445556678999864 44434444566999977765
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.65 E-value=0.018 Score=54.32 Aligned_cols=176 Identities=15% Similarity=0.219 Sum_probs=90.9
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.+++.+... ....+|+|+|.|.|. +...|+.+- | ..++|||+.... .-+.
T Consensus 33 ~~~~~~~~~~----~~~~~vLDiG~G~G~----~~~~l~~~~---~-~~~v~~vD~s~~-----------------~~~~ 83 (234)
T 3dtn_A 33 GVSVSIASVD----TENPDILDLGAGTGL----LSAFLMEKY---P-EATFTLVDMSEK-----------------MLEI 83 (234)
T ss_dssp HHHHHTCCCS----CSSCEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEESCHH-----------------HHHH
T ss_pred HHHHHHhhcC----CCCCeEEEecCCCCH----HHHHHHHhC---C-CCeEEEEECCHH-----------------HHHH
Confidence 5556655421 123899999999984 445555543 3 489999987432 1222
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE-ecc
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS-ENN 428 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv-E~e 428 (561)
..+.++..+ .++|... +++++... +..=+|-|...|||+.+ ..+..+|+.+ |.|+|..++++ +..
T Consensus 84 a~~~~~~~~-~~~~~~~---d~~~~~~~------~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 84 AKNRFRGNL-KVKYIEA---DYSKYDFE------EKYDMVVSALSIHHLED---EDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp HHHHTCSCT-TEEEEES---CTTTCCCC------SCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHhhccCC-CEEEEeC---chhccCCC------CCceEEEEeCccccCCH---HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 222333333 3444332 33333221 33445555678999854 2444677766 55999977665 433
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHhhhhhhcCCCChHH-hhhheeeeecccccccccccChHHHHHHHhcCCCccccC
Q 008559 429 MDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEE-RRVMEGEAAKALTNRAEMNEGKDKWCDRMRGVGFVGDVF 507 (561)
Q Consensus 429 ad~~~~n~~~F~~RF~eaL~yY~alfDSLdaa~~~r~s~e-R~~iEivA~EG~~Rv~ER~E~~~~Wr~Rm~~AGF~~vpl 507 (561)
.. +...+...+.. ++...+.. . +....+ +...+.. .. .+.-+.+.|...|+.|||+.+.+
T Consensus 151 ~~----~~~~~~~~~~~---~~~~~~~~---~--~~~~~~~~~~~~~~------~~-~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 151 HG----ETAFIENLNKT---IWRQYVEN---S--GLTEEEIAAGYERS------KL-DKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp BC----SSHHHHHHHHH---HHHHHHHT---S--SCCHHHHHTTC----------C-CCCCBHHHHHHHHHHTTCEEEEE
T ss_pred CC----CChhhhhHHHH---HHHHHHHh---c--CCCHHHHHHHHHhc------cc-ccccCHHHHHHHHHHcCCCceee
Confidence 32 32222222221 12122111 1 111111 1111111 23 56668899999999999988753
No 4
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.56 E-value=0.072 Score=51.61 Aligned_cols=101 Identities=20% Similarity=0.243 Sum_probs=61.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-+|+|+|.|.| .+...|+.+ + | ..++|||+.... .-....+.++..+++ .+|..
T Consensus 39 ~~vLDiG~G~G----~~~~~l~~~--~-~-~~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 93 (276)
T 3mgg_A 39 AKVLEAGCGIG----AQTVILAKN--N-P-DAEITSIDISPE-----------------SLEKARENTEKNGIKNVKFLQ 93 (276)
T ss_dssp CEEEETTCTTS----HHHHHHHHH--C-T-TSEEEEEESCHH-----------------HHHHHHHHHHHTTCCSEEEEE
T ss_pred CeEEEecCCCC----HHHHHHHHh--C-C-CCEEEEEECCHH-----------------HHHHHHHHHHHcCCCCcEEEE
Confidence 78999999998 345566665 2 2 379999987532 233444445555654 44443
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. +++ +...++..=+|-+...|||+.+ + ..+|+.+ +-|+|..++++.
T Consensus 94 ~d---~~~-----~~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 94 AN---IFS-----LPFEDSSFDHIFVCFVLEHLQS----P-EEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CC---GGG-----CCSCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred cc---ccc-----CCCCCCCeeEEEEechhhhcCC----H-HHHHHHHHHHcCCCcEEEEE
Confidence 32 222 2233454555666778888864 3 3566665 559999777654
No 5
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=96.33 E-value=0.076 Score=54.55 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=60.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
-+|+|+|.|.|. +...|+.+- | .+++|+++.+. +-....+.++..|+ .++|.
T Consensus 181 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~~------------------~~~~a~~~~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 181 KRLLDIGGNTGK----WATQCVQYN---K-EVEVTIVDLPQ------------------QLEMMRKQTAGLSGSERIHGH 234 (363)
T ss_dssp SEEEEESCTTCH----HHHHHHHHS---T-TCEEEEEECHH------------------HHHHHHHHHTTCTTGGGEEEE
T ss_pred CEEEEeCCCcCH----HHHHHHHhC---C-CCEEEEEeCHH------------------HHHHHHHHHHhcCcccceEEE
Confidence 789999999985 455666652 3 58999998621 22333344445555 35555
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEE-EEeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVI-LSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVv-lvE~ead 430 (561)
.-.. .+.+. .+. ..-+++ -+..-||++.+ .....+|+.+ +.|+|...+ ++|.-.+
T Consensus 235 ~~d~---~~~~~-~~p-~~~D~v--~~~~vlh~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 235 GANL---LDRDV-PFP-TGFDAV--WMSQFLDCFSE---EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp ECCC---CSSSC-CCC-CCCSEE--EEESCSTTSCH---HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred Eccc---cccCC-CCC-CCcCEE--EEechhhhCCH---HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 4332 21110 011 122343 34456888865 2455677777 559998755 4565444
No 6
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.33 E-value=0.2 Score=47.76 Aligned_cols=116 Identities=17% Similarity=0.218 Sum_probs=66.3
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
+.-+++.+.-.+. -+|+|+|.|.|. +...|+.+ ++ ++|+|+.... .-.
T Consensus 10 ~~~~~~~~~~~~~-----~~vLDiGcG~G~----~~~~l~~~--~~----~v~~vD~s~~-----------------~~~ 57 (239)
T 1xxl_A 10 LGLMIKTAECRAE-----HRVLDIGAGAGH----TALAFSPY--VQ----ECIGVDATKE-----------------MVE 57 (239)
T ss_dssp HHHHHHHHTCCTT-----CEEEEESCTTSH----HHHHHGGG--SS----EEEEEESCHH-----------------HHH
T ss_pred cchHHHHhCcCCC-----CEEEEEccCcCH----HHHHHHHh--CC----EEEEEECCHH-----------------HHH
Confidence 3345555655555 789999999985 45566665 21 8999987532 223
Q ss_pred HHHHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEE-ec
Q 008559 350 QLLGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS-EN 427 (561)
Q Consensus 350 rL~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlv-E~ 427 (561)
...+.++..|++ ++|... .++++ ...++..=+|-|...+||+.+ +...+-+..+-|+|...+++ +.
T Consensus 58 ~a~~~~~~~~~~~v~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 58 VASSFAQEKGVENVRFQQG---TAESL-----PFPDDSFDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHHHHHTCCSEEEEEC---BTTBC-----CSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCeEEEec---ccccC-----CCCCCcEEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEEEEc
Confidence 333344444544 444432 33333 233444445556678888863 43434444566999977765 44
Q ss_pred cC
Q 008559 428 NM 429 (561)
Q Consensus 428 ea 429 (561)
..
T Consensus 126 ~~ 127 (239)
T 1xxl_A 126 YA 127 (239)
T ss_dssp CB
T ss_pred CC
Confidence 33
No 7
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.32 E-value=0.2 Score=46.46 Aligned_cols=113 Identities=16% Similarity=0.257 Sum_probs=65.6
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.|++.+.-.+. -.|+|+|.|.|.--. .|+.+ +.| ..++|||+.... .-+.
T Consensus 27 ~~~~~~~~~~~~-----~~vLDiG~G~G~~~~----~l~~~--~~~-~~~v~~vD~s~~-----------------~~~~ 77 (219)
T 3dh0_A 27 EKVLKEFGLKEG-----MTVLDVGTGAGFYLP----YLSKM--VGE-KGKVYAIDVQEE-----------------MVNY 77 (219)
T ss_dssp HHHHHHHTCCTT-----CEEEESSCTTCTTHH----HHHHH--HTT-TCEEEEEESCHH-----------------HHHH
T ss_pred HHHHHHhCCCCC-----CEEEEEecCCCHHHH----HHHHH--hCC-CcEEEEEECCHH-----------------HHHH
Confidence 567777754455 789999999996433 33333 123 479999987532 2233
Q ss_pred HHHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 351 LLGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 351 L~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
..+.++..+++ ++|.... ++++ ...++..=+|-+...|||+.+ + ..+|+.+ +.|+|..++++
T Consensus 78 a~~~~~~~~~~~~~~~~~d---~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 78 AWEKVNKLGLKNVEVLKSE---ENKI-----PLPDNTVDFIFMAFTFHELSE----P-LKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp HHHHHHHHTCTTEEEEECB---TTBC-----SSCSSCEEEEEEESCGGGCSS----H-HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEecc---cccC-----CCCCCCeeEEEeehhhhhcCC----H-HHHHHHHHHHhCCCeEEEE
Confidence 33444445554 4544332 2322 233343445556677888853 3 4555554 66999877665
No 8
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.24 E-value=0.11 Score=51.94 Aligned_cols=116 Identities=18% Similarity=0.188 Sum_probs=67.8
Q ss_pred HHHHHHhc--CccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 272 SILQILAQ--DRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 272 AILEA~~g--~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
.|++.+.- .+. .+|+|+|.|.|. +...|+.+- | ..++|+++.+ .. ++.+.+
T Consensus 154 ~~~~~~~~~~~~~-----~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~-~~-------------~~~a~~ 206 (335)
T 2r3s_A 154 LIAQLVNENKIEP-----LKVLDISASHGL----FGIAVAQHN---P-NAEIFGVDWA-SV-------------LEVAKE 206 (335)
T ss_dssp HHHHHHTC--CCC-----SEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEECH-HH-------------HHHHHH
T ss_pred HHHHhcccccCCC-----CEEEEECCCcCH----HHHHHHHHC---C-CCeEEEEecH-HH-------------HHHHHH
Confidence 56666643 444 899999999994 555666653 3 4799999875 31 233333
Q ss_pred HHHHHHHhcCce--EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCE-EEEE
Q 008559 350 QLLGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKG-VILS 425 (561)
Q Consensus 350 rL~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~Pkv-Vvlv 425 (561)
++ +..|++ ++|.... +.+. .+..+ .=+|-|...||++.+ .....+|+.+ +.|+|.. ++++
T Consensus 207 ~~----~~~~~~~~v~~~~~d---~~~~-----~~~~~-~D~v~~~~~l~~~~~---~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 207 NA----RIQGVASRYHTIAGS---AFEV-----DYGND-YDLVLLPNFLHHFDV---ATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp HH----HHHTCGGGEEEEESC---TTTS-----CCCSC-EEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HH----HhcCCCcceEEEecc---cccC-----CCCCC-CcEEEEcchhccCCH---HHHHHHHHHHHHhCCCCcEEEEE
Confidence 33 333543 5554432 2221 12222 434445667888854 2345677766 5589998 5666
Q ss_pred eccCC
Q 008559 426 ENNMD 430 (561)
Q Consensus 426 E~ead 430 (561)
|....
T Consensus 271 e~~~~ 275 (335)
T 2r3s_A 271 DFIPN 275 (335)
T ss_dssp ECCCC
T ss_pred eecCC
Confidence 76554
No 9
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.23 E-value=0.066 Score=49.27 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=60.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|. +...|+.++ ..++|||+.... .-+...+.++..++. ++|.
T Consensus 45 ~~vLdiG~G~G~----~~~~l~~~~-----~~~v~~~D~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 98 (219)
T 3dlc_A 45 GTCIDIGSGPGA----LSIALAKQS-----DFSIRALDFSKH-----------------MNEIALKNIADANLNDRIQIV 98 (219)
T ss_dssp EEEEEETCTTSH----HHHHHHHHS-----EEEEEEEESCHH-----------------HHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEECCCCCH----HHHHHHHcC-----CCeEEEEECCHH-----------------HHHHHHHHHHhccccCceEEE
Confidence 399999999985 566666662 489999987532 233344445555653 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
... ++++ ...++..=+|-|...|||+.+ + ..+|+.+ +.|+|..++++.
T Consensus 99 ~~d---~~~~-----~~~~~~~D~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 99 QGD---VHNI-----PIEDNYADLIVSRGSVFFWED----V-ATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp ECB---TTBC-----SSCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred EcC---HHHC-----CCCcccccEEEECchHhhccC----H-HHHHHHHHHhCCCCCEEEEE
Confidence 432 3332 233444445556678888842 3 4455554 669999877664
No 10
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.20 E-value=0.061 Score=50.17 Aligned_cols=101 Identities=22% Similarity=0.233 Sum_probs=60.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc------e
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI------N 361 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV------p 361 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+... +.-+...+.++..++ .
T Consensus 32 ~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~s~-----------------~~~~~a~~~~~~~~~~~~~~~~ 84 (235)
T 3sm3_A 32 DEILDIGCGSGK----ISLELASK--G----YSVTGIDINS-----------------EAIRLAETAARSPGLNQKTGGK 84 (235)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--T----CEEEEEESCH-----------------HHHHHHHHHTTCCSCCSSSSCE
T ss_pred CeEEEECCCCCH----HHHHHHhC--C----CeEEEEECCH-----------------HHHHHHHHHHHhcCCccccCcc
Confidence 679999999984 45566665 2 4899998742 223444444555565 3
Q ss_pred EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 362 LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 362 FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
++|.... ++.+ ...++..=+|-|...|||+.+ +..+..+|+.+ +.|+|..++++
T Consensus 85 ~~~~~~d---~~~~-----~~~~~~~D~v~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 85 AEFKVEN---ASSL-----SFHDSSFDFAVMQAFLTSVPD--PKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp EEEEECC---TTSC-----CSCTTCEEEEEEESCGGGCCC--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEec---cccc-----CCCCCceeEEEEcchhhcCCC--HHHHHHHHHHHHHHcCCCeEEEE
Confidence 4554432 2222 233344445555678888865 23345677776 55899877665
No 11
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.12 E-value=0.19 Score=48.43 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=66.0
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHH
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL 351 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+.+- | | ..++|||+....... .| .-++.+.++
T Consensus 34 ~l~~~~~~~~~-----~~vLDiGcG~G~----~~~~l~~~~-g-~-~~~v~gvD~s~~~~~---~~----~~~~~a~~~- 93 (275)
T 3bkx_A 34 AIAEAWQVKPG-----EKILEIGCGQGD----LSAVLADQV-G-S-SGHVTGIDIASPDYG---AP----LTLGQAWNH- 93 (275)
T ss_dssp HHHHHHTCCTT-----CEEEEESCTTSH----HHHHHHHHH-C-T-TCEEEEECSSCTTCC---SS----SCHHHHHHH-
T ss_pred HHHHHcCCCCC-----CEEEEeCCCCCH----HHHHHHHHh-C-C-CCEEEEEECCccccc---cH----HHHHHHHHH-
Confidence 46666644444 789999999885 344455542 3 2 479999987542100 00 013333333
Q ss_pred HHHHHhcCce--EEEEEEecCCCCCCccccccCCCC--CEEEEEeeccccccCCCCCchHHHHHHHHHhcCC-C-EEEEE
Q 008559 352 LGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPE--ETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEP-K-GVILS 425 (561)
Q Consensus 352 ~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~--EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~P-k-vVvlv 425 (561)
++..++. ++|.... ++....+...++ ++|+ |...|||+.+ + ..+++.++.|.| . .+++.
T Consensus 94 ---~~~~~~~~~v~~~~~d-----~~~~~~~~~~~~~fD~v~--~~~~l~~~~~----~-~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 94 ---LLAGPLGDRLTVHFNT-----NLSDDLGPIADQHFDRVV--LAHSLWYFAS----A-NALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp ---HHTSTTGGGEEEECSC-----CTTTCCGGGTTCCCSEEE--EESCGGGSSC----H-HHHHHHHHHHTTTCSEEEEE
T ss_pred ---HHhcCCCCceEEEECC-----hhhhccCCCCCCCEEEEE--EccchhhCCC----H-HHHHHHHHHHhCCCCEEEEE
Confidence 3344442 4443221 111122222222 3444 4566788864 3 348999999887 4 55666
Q ss_pred eccCC
Q 008559 426 ENNMD 430 (561)
Q Consensus 426 E~ead 430 (561)
+....
T Consensus 159 ~~~~~ 163 (275)
T 3bkx_A 159 EWSMQ 163 (275)
T ss_dssp EECSS
T ss_pred EecCC
Confidence 66555
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.75 E-value=0.099 Score=48.65 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=32.1
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-..+++.+...+. -.|+|+|.|.|. +...|+.+ | .++|||+..
T Consensus 34 ~~~~l~~~~~~~~-----~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~s 76 (220)
T 3hnr_A 34 YEDILEDVVNKSF-----GNVLEFGVGTGN----LTNKLLLA--G----RTVYGIEPS 76 (220)
T ss_dssp HHHHHHHHHHTCC-----SEEEEECCTTSH----HHHHHHHT--T----CEEEEECSC
T ss_pred HHHHHHHhhccCC-----CeEEEeCCCCCH----HHHHHHhC--C----CeEEEEeCC
Confidence 3567777766565 799999999984 56667766 2 589999874
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.72 E-value=0.12 Score=47.66 Aligned_cols=97 Identities=23% Similarity=0.325 Sum_probs=56.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+... ...+.|+...-..+|...
T Consensus 43 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~s~---------------------~~~~~a~~~~~~~~~~~~ 91 (203)
T 3h2b_A 43 GVILDVGSGTGR----WTGHLASL--G----HQIEGLEPAT---------------------RLVELARQTHPSVTFHHG 91 (203)
T ss_dssp SCEEEETCTTCH----HHHHHHHT--T----CCEEEECCCH---------------------HHHHHHHHHCTTSEEECC
T ss_pred CeEEEecCCCCH----HHHHHHhc--C----CeEEEEeCCH---------------------HHHHHHHHhCCCCeEEeC
Confidence 789999999986 56677776 2 3789998742 122333332222333222
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.+++ +...++..=+|-|...|||+..+ ....+|+.+ +.|+|..++++.
T Consensus 92 ---d~~~-----~~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 92 ---TITD-----LSDSPKRWAGLLAWYSLIHMGPG---ELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp ---CGGG-----GGGSCCCEEEEEEESSSTTCCTT---THHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cccc-----cccCCCCeEEEEehhhHhcCCHH---HHHHHHHHHHHHcCCCcEEEEE
Confidence 2222 22334444455566789998642 345566655 669998777654
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.69 E-value=0.25 Score=50.33 Aligned_cols=116 Identities=14% Similarity=0.133 Sum_probs=66.3
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+.-... -+|+|+|.|.|. +...|+.+- | .+++|+++. .. -++.+.++
T Consensus 180 ~~l~~~~~~~~~-----~~vLDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~~-------------~~~~a~~~ 232 (359)
T 1x19_A 180 QLLLEEAKLDGV-----KKMIDVGGGIGD----ISAAMLKHF---P-ELDSTILNL-PG-------------AIDLVNEN 232 (359)
T ss_dssp HHHHHHCCCTTC-----CEEEEESCTTCH----HHHHHHHHC---T-TCEEEEEEC-GG-------------GHHHHHHH
T ss_pred HHHHHhcCCCCC-----CEEEEECCcccH----HHHHHHHHC---C-CCeEEEEec-HH-------------HHHHHHHH
Confidence 455555543333 789999999986 445555552 3 589999987 32 13444444
Q ss_pred HHHHHHhcCce--EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCEEE-EEe
Q 008559 351 LLGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKGVI-LSE 426 (561)
Q Consensus 351 L~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~PkvVv-lvE 426 (561)
+. ..|++ ++|..-. +.+. .+...++++. ...||++.+ .....+|+.++ .|+|...+ ++|
T Consensus 233 ~~----~~~~~~~v~~~~~d---~~~~-----~~~~~D~v~~--~~vlh~~~d---~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 233 AA----EKGVADRMRGIAVD---IYKE-----SYPEADAVLF--CRILYSANE---QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp HH----HTTCTTTEEEEECC---TTTS-----CCCCCSEEEE--ESCGGGSCH---HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred HH----hcCCCCCEEEEeCc---cccC-----CCCCCCEEEE--echhccCCH---HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 33 33443 5554432 2222 1223344444 456888764 23566777765 58998765 566
Q ss_pred ccCC
Q 008559 427 NNMD 430 (561)
Q Consensus 427 ~ead 430 (561)
....
T Consensus 296 ~~~~ 299 (359)
T 1x19_A 296 MVID 299 (359)
T ss_dssp ECCC
T ss_pred cccC
Confidence 5544
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.68 E-value=0.45 Score=45.22 Aligned_cols=128 Identities=13% Similarity=0.064 Sum_probs=71.8
Q ss_pred hhccCCCCCchhHhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCC
Q 008559 255 FYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNA 334 (561)
Q Consensus 255 f~e~sP~~kfahftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~ 334 (561)
+|+..+-..-.+...-..+++.+.+-.. .-+|+|+|.|.|. +...|+.+- | . ++|||+....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~----~~~vLDiG~G~G~----~~~~l~~~~---~-~-~v~~vD~s~~----- 80 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTD----DAKIADIGCGTGG----QTLFLADYV---K-G-QITGIDLFPD----- 80 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCT----TCEEEEETCTTSH----HHHHHHHHC---C-S-EEEEEESCHH-----
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCC----CCeEEEeCCCCCH----HHHHHHHhC---C-C-eEEEEECCHH-----
Confidence 3443443333444444445555533221 2689999999985 445555553 2 2 8999987532
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCce--EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHH
Q 008559 335 ETPFSVGPPGDNYSLQLLGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLR 412 (561)
Q Consensus 335 ~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~ 412 (561)
.-....+.++..|++ .+|... +++++. ..++..=+|-|...|||+ + ...+|+
T Consensus 81 ------------~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~-~-----~~~~l~ 134 (257)
T 3f4k_A 81 ------------FIEIFNENAVKANCADRVKGITG---SMDNLP-----FQNEELDLIWSEGAIYNI-G-----FERGMN 134 (257)
T ss_dssp ------------HHHHHHHHHHHTTCTTTEEEEEC---CTTSCS-----SCTTCEEEEEEESCSCCC-C-----HHHHHH
T ss_pred ------------HHHHHHHHHHHcCCCCceEEEEC---ChhhCC-----CCCCCEEEEEecChHhhc-C-----HHHHHH
Confidence 334445556666766 555433 333332 333444455556678887 2 345666
Q ss_pred HH-HhcCCCEEEEEe
Q 008559 413 VL-RSLEPKGVILSE 426 (561)
Q Consensus 413 ~I-R~L~PkvVvlvE 426 (561)
.+ +-|+|..++++.
T Consensus 135 ~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 135 EWSKYLKKGGFIAVS 149 (257)
T ss_dssp HHHTTEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEE
Confidence 65 559998777654
No 16
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=95.67 E-value=0.14 Score=51.80 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=61.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
.+|+|+|.|.|. +...|+.+- | .+++|+++.+. .++...+ .++..++. ++|.
T Consensus 181 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~~--------------~~~~a~~----~~~~~~~~~~v~~~ 234 (352)
T 3mcz_A 181 RTVIDLAGGHGT----YLAQVLRRH---P-QLTGQIWDLPT--------------TRDAARK----TIHAHDLGGRVEFF 234 (352)
T ss_dssp CEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEECGG--------------GHHHHHH----HHHHTTCGGGEEEE
T ss_pred CEEEEeCCCcCH----HHHHHHHhC---C-CCeEEEEECHH--------------HHHHHHH----HHHhcCCCCceEEE
Confidence 899999999995 556666553 3 48999998732 1233333 34444543 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-EeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ead 430 (561)
.-. +.+... ..++..=+|-|...||++.+ .....+|+.+ +.|+|...++ +|.-.+
T Consensus 235 ~~d---~~~~~~----~~~~~~D~v~~~~vlh~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 235 EKN---LLDARN----FEGGAADVVMLNDCLHYFDA---REAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp ECC---TTCGGG----GTTCCEEEEEEESCGGGSCH---HHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred eCC---cccCcc----cCCCCccEEEEecccccCCH---HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 443 222110 01222445555677898865 2456777776 5589987655 455443
No 17
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.65 E-value=0.13 Score=52.86 Aligned_cols=117 Identities=15% Similarity=0.215 Sum_probs=63.1
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++++.-... -+|+|+|.|.|. ++.+|+++- | .+|+|+++.|.- ++.+.++
T Consensus 169 ~~~~~~~~~~~~-----~~v~DvGgG~G~----~~~~l~~~~---p-~~~~~~~dlp~v--------------~~~a~~~ 221 (353)
T 4a6d_A 169 RSVLTAFDLSVF-----PLMCDLGGGAGA----LAKECMSLY---P-GCKITVFDIPEV--------------VWTAKQH 221 (353)
T ss_dssp HHHHHSSCGGGC-----SEEEEETCTTSH----HHHHHHHHC---S-SCEEEEEECHHH--------------HHHHHHH
T ss_pred HHHHHhcCcccC-----CeEEeeCCCCCH----HHHHHHHhC---C-CceeEeccCHHH--------------HHHHHHh
Confidence 455555443333 589999999994 667777764 4 699998876421 2222222
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCE-EEEEecc
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKG-VILSENN 428 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~Pkv-VvlvE~e 428 (561)
+ +.+ ..=.++|..-.. .++ .+...+++ -+..-||+..|+ ....+|+.+ +.|+|.. |+++|.-
T Consensus 222 ~-~~~--~~~rv~~~~gD~--~~~------~~~~~D~~--~~~~vlh~~~d~---~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 222 F-SFQ--EEEQIDFQEGDF--FKD------PLPEADLY--ILARVLHDWADG---KCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp S-CC----CCSEEEEESCT--TTS------CCCCCSEE--EEESSGGGSCHH---HHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred h-hhc--ccCceeeecCcc--ccC------CCCCceEE--EeeeecccCCHH---HHHHHHHHHHhhCCCCCEEEEEEee
Confidence 2 111 111244433221 111 12223443 344568888762 445677777 4599986 5556654
Q ss_pred CC
Q 008559 429 MD 430 (561)
Q Consensus 429 ad 430 (561)
.+
T Consensus 286 ~~ 287 (353)
T 4a6d_A 286 LD 287 (353)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 18
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.56 E-value=0.12 Score=51.04 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=61.7
Q ss_pred ceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEE
Q 008559 287 NLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINR 366 (561)
Q Consensus 287 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~ 366 (561)
..+|+|+|.|.|.--..|+..|+.+- |-..+.+|||+++..- ++...+++.+...--++.|+|..
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~--~~~~v~~~~vD~S~~m-------------l~~a~~~~~~~~~~~~v~~~~~~ 117 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQY--PGVCINNEVVEPSAEQ-------------IAKYKELVAKTSNLENVKFAWHK 117 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHS--TTCEEEEEEECSCHHH-------------HHHHHHHHHTCSSCTTEEEEEEC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhC--CCceeeEEEEeCCHHH-------------HHHHHHHHHhccCCCcceEEEEe
Confidence 37999999999954445777777652 2112344999875321 22222222110000134555443
Q ss_pred EecCCCCCCcccc-ccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 367 LESHPLQDLSSQM-VSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~~~-L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. .+++.... ....++..=+|-|.+.|||+.+ + ..+|+.+ |-|+|...+++-
T Consensus 118 ~~---~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d----~-~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 118 ET---SSEYQSRMLEKKELQKWDFIHMIQMLYYVKD----I-PATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp SC---HHHHHHHHHTTTCCCCEEEEEEESCGGGCSC----H-HHHHHHHHHTEEEEEEEEEE
T ss_pred cc---hhhhhhhhccccCCCceeEEEEeeeeeecCC----H-HHHHHHHHHHcCCCcEEEEE
Confidence 22 22221000 0022344556677889999874 3 4566665 558999766653
No 19
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.53 E-value=0.19 Score=51.10 Aligned_cols=101 Identities=25% Similarity=0.441 Sum_probs=58.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
.+|+|+|.|.| .+...|+.+- | .+++|+++. .. -++.+.++ ++..|+. ++|.
T Consensus 184 ~~vlDvG~G~G----~~~~~l~~~~---~-~~~~~~~D~-~~-------------~~~~a~~~----~~~~~~~~~v~~~ 237 (374)
T 1qzz_A 184 RHVLDVGGGNG----GMLAAIALRA---P-HLRGTLVEL-AG-------------PAERARRR----FADAGLADRVTVA 237 (374)
T ss_dssp CEEEEETCTTS----HHHHHHHHHC---T-TCEEEEEEC-HH-------------HHHHHHHH----HHHTTCTTTEEEE
T ss_pred CEEEEECCCcC----HHHHHHHHHC---C-CCEEEEEeC-HH-------------HHHHHHHH----HHhcCCCCceEEE
Confidence 79999999999 5566666653 3 589999986 22 12333333 3344553 5555
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCE-EEEEec
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKG-VILSEN 427 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~Pkv-VvlvE~ 427 (561)
.... .+.+ +...=+|-|...|||+.+ .....+|+.+ +.|+|.. ++++|.
T Consensus 238 ~~d~--~~~~--------~~~~D~v~~~~vl~~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 238 EGDF--FKPL--------PVTADVVLLSFVLLNWSD---EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ECCT--TSCC--------SCCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCCC--CCcC--------CCCCCEEEEeccccCCCH---HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4432 1111 111334445667888764 2334667766 5589998 445666
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.38 E-value=0.17 Score=48.10 Aligned_cols=120 Identities=13% Similarity=0.181 Sum_probs=65.8
Q ss_pred CCCchhHhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCC
Q 008559 261 WFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSV 340 (561)
Q Consensus 261 ~~kfahftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~ 340 (561)
++.-.....-..|++.+.-.+. -+|+|+|.|.|. +...|+.+- | .++|||+.+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~-----~~vLdiG~G~G~----~~~~l~~~~-~----~~v~~vD~s~------------ 88 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNEN-----SKVLDIGSGLGG----GCMYINEKY-G----AHTHGIDICS------------ 88 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTT-----CEEEEETCTTSH----HHHHHHHHH-C----CEEEEEESCH------------
T ss_pred ccccchHHHHHHHHHhcCCCCC-----CEEEEECCCCCH----HHHHHHHHc-C----CEEEEEeCCH------------
Confidence 3333333444555555543344 799999999884 444555542 1 5899998742
Q ss_pred CCCHHHHHHHHHHHHHhcC---ceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-Hh
Q 008559 341 GPPGDNYSLQLLGFAKSMN---INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RS 416 (561)
Q Consensus 341 ~~~l~etg~rL~~fA~~lg---VpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~ 416 (561)
...+.|+... -.++|... ++.++ ...++..=+|-|...|||+.. .....+|+.+ +-
T Consensus 89 ---------~~~~~a~~~~~~~~~~~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~ 148 (266)
T 3ujc_A 89 ---------NIVNMANERVSGNNKIIFEAN---DILTK-----EFPENNFDLIYSRDAILALSL---ENKNKLFQKCYKW 148 (266)
T ss_dssp ---------HHHHHHHHTCCSCTTEEEEEC---CTTTC-----CCCTTCEEEEEEESCGGGSCH---HHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHhhcCCCeEEEEC---ccccC-----CCCCCcEEEEeHHHHHHhcCh---HHHHHHHHHHHHH
Confidence 2223333321 23444433 22222 233344445556678899843 2445666665 56
Q ss_pred cCCCEEEEEe
Q 008559 417 LEPKGVILSE 426 (561)
Q Consensus 417 L~PkvVvlvE 426 (561)
|+|...+++.
T Consensus 149 L~pgG~l~~~ 158 (266)
T 3ujc_A 149 LKPTGTLLIT 158 (266)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCCEEEEE
Confidence 9998766653
No 21
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.28 E-value=0.47 Score=45.60 Aligned_cols=99 Identities=23% Similarity=0.227 Sum_probs=58.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|. +...|+.+. | .++|||+.+.. .-....+.++..|++ ++|.
T Consensus 63 ~~vLDiGcG~G~----~~~~l~~~~-~----~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 116 (273)
T 3bus_A 63 DRVLDVGCGIGK----PAVRLATAR-D----VRVTGISISRP-----------------QVNQANARATAAGLANRVTFS 116 (273)
T ss_dssp CEEEEESCTTSH----HHHHHHHHS-C----CEEEEEESCHH-----------------HHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEeCCCCCH----HHHHHHHhc-C----CEEEEEeCCHH-----------------HHHHHHHHHHhcCCCcceEEE
Confidence 799999999885 444555543 2 58999987532 223334445555654 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.. +++++ ...++..=+|-+...|||+.+ + ..+|+.+ +-|+|...+++
T Consensus 117 ~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 117 YA---DAMDL-----PFEDASFDAVWALESLHHMPD----R-GRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EC---CTTSC-----CSCTTCEEEEEEESCTTTSSC----H-HHHHHHHHTTEEEEEEEEE
T ss_pred EC---ccccC-----CCCCCCccEEEEechhhhCCC----H-HHHHHHHHHHcCCCeEEEE
Confidence 33 23332 233344445556677888853 3 5666666 55899976664
No 22
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.14 E-value=0.13 Score=50.13 Aligned_cols=100 Identities=15% Similarity=0.268 Sum_probs=54.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+. | .++|||+.... .-+...+.++..|+.-.+..+
T Consensus 66 ~~vLDiGcG~G~----~~~~l~~~~-~----~~v~gvd~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 119 (287)
T 1kpg_A 66 MTLLDVGCGWGA----TMMRAVEKY-D----VNVVGLTLSKN-----------------QANHVQQLVANSENLRSKRVL 119 (287)
T ss_dssp CEEEEETCTTSH----HHHHHHHHH-C----CEEEEEESCHH-----------------HHHHHHHHHHTCCCCSCEEEE
T ss_pred CEEEEECCcccH----HHHHHHHHc-C----CEEEEEECCHH-----------------HHHHHHHHHHhcCCCCCeEEE
Confidence 789999998875 455566443 2 38999987532 223333344445553222323
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.. +++++. ..=+.|+ |...|||+... ....+|+.+ +-|+|..++++
T Consensus 120 ~~-d~~~~~------~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 120 LA-GWEQFD------EPVDRIV--SIGAFEHFGHE---RYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ES-CGGGCC------CCCSEEE--EESCGGGTCTT---THHHHHHHHHHHSCTTCEEEE
T ss_pred EC-ChhhCC------CCeeEEE--EeCchhhcChH---HHHHHHHHHHHhcCCCCEEEE
Confidence 32 333332 1112333 44578888642 344556555 66999876654
No 23
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.05 E-value=0.13 Score=50.14 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=60.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
.+|+|+|.|.| .+...|+.+ | .++|||+... +.-....+.++..|++ ++|.
T Consensus 70 ~~vLDiGcG~G----~~~~~l~~~--~----~~v~gvD~s~-----------------~~~~~a~~~~~~~~~~~~v~~~ 122 (285)
T 4htf_A 70 LRVLDAGGGEG----QTAIKMAER--G----HQVILCDLSA-----------------QMIDRAKQAAEAKGVSDNMQFI 122 (285)
T ss_dssp CEEEEETCTTC----HHHHHHHHT--T----CEEEEEESCH-----------------HHHHHHHHHHHC-CCGGGEEEE
T ss_pred CEEEEeCCcch----HHHHHHHHC--C----CEEEEEECCH-----------------HHHHHHHHHHHhcCCCcceEEE
Confidence 78999999998 356667766 2 5899998753 2334444455556664 4444
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.. .++++.. ..++..=+|-|...|||+.+ +. .+|+.+ +-|+|..++++..
T Consensus 123 ~~---d~~~~~~----~~~~~fD~v~~~~~l~~~~~----~~-~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 123 HC---AAQDVAS----HLETPVDLILFHAVLEWVAD----PR-SVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp ES---CGGGTGG----GCSSCEEEEEEESCGGGCSC----HH-HHHHHHHHTEEEEEEEEEEE
T ss_pred Ec---CHHHhhh----hcCCCceEEEECchhhcccC----HH-HHHHHHHHHcCCCeEEEEEE
Confidence 33 2333221 22344445555677888853 44 455554 6699998777643
No 24
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.05 E-value=0.19 Score=49.01 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=59.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+.-.+. -.|+|+|.|.|.- ...|+. + ..++|||+....
T Consensus 47 ~~l~~~l~~~~~-----~~vLDiGcG~G~~----~~~l~~-~-----~~~v~gvD~s~~--------------------- 90 (279)
T 3ccf_A 47 EDLLQLLNPQPG-----EFILDLGCGTGQL----TEKIAQ-S-----GAEVLGTDNAAT--------------------- 90 (279)
T ss_dssp CHHHHHHCCCTT-----CEEEEETCTTSHH----HHHHHH-T-----TCEEEEEESCHH---------------------
T ss_pred HHHHHHhCCCCC-----CEEEEecCCCCHH----HHHHHh-C-----CCeEEEEECCHH---------------------
Confidence 345666654444 6899999999853 344444 2 368999987431
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEec
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSEN 427 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ 427 (561)
..+.|+...-.++|... .++++. . ++..=+|-|...|||+.+ +. .+|+. .|-|+|...+++..
T Consensus 91 ~~~~a~~~~~~~~~~~~---d~~~~~-----~-~~~fD~v~~~~~l~~~~d----~~-~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 91 MIEKARQNYPHLHFDVA---DARNFR-----V-DKPLDAVFSNAMLHWVKE----PE-AAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp HHHHHHHHCTTSCEEEC---CTTTCC-----C-SSCEEEEEEESCGGGCSC----HH-HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhhCCCCEEEEC---ChhhCC-----c-CCCcCEEEEcchhhhCcC----HH-HHHHHHHHhcCCCcEEEEEe
Confidence 11222221112233322 233332 2 233334445677888864 33 45555 46699998777654
No 25
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.03 E-value=0.45 Score=48.14 Aligned_cols=102 Identities=25% Similarity=0.394 Sum_probs=58.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
.+|+|+|.|.|. +...|+.+- | .+++|+++. .. -++.+.+++ +..|+ .++|.
T Consensus 185 ~~vLDvG~G~G~----~~~~l~~~~---~-~~~~~~~D~-~~-------------~~~~a~~~~----~~~~~~~~v~~~ 238 (360)
T 1tw3_A 185 RHVLDVGGGKGG----FAAAIARRA---P-HVSATVLEM-AG-------------TVDTARSYL----KDEGLSDRVDVV 238 (360)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEEC-TT-------------HHHHHHHHH----HHTTCTTTEEEE
T ss_pred cEEEEeCCcCcH----HHHHHHHhC---C-CCEEEEecC-HH-------------HHHHHHHHH----HhcCCCCceEEE
Confidence 799999999994 445555542 3 589999986 21 133333333 34455 35555
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEE-EEecc
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVI-LSENN 428 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVv-lvE~e 428 (561)
.-.. .+.+ ++..=+|-+...||++.+ .....+|+.+ +.|+|...+ ++|..
T Consensus 239 ~~d~--~~~~--------~~~~D~v~~~~vl~~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 239 EGDF--FEPL--------PRKADAIILSFVLLNWPD---HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ECCT--TSCC--------SSCEEEEEEESCGGGSCH---HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eCCC--CCCC--------CCCccEEEEcccccCCCH---HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 4332 1111 112334445567888764 2334677766 558998744 46665
No 26
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.97 E-value=0.13 Score=47.76 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=55.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.| .+...|+.+ ++ ++|+|+.... .-+...+.++..+..++|...
T Consensus 40 ~~vLDlG~G~G----~~~~~l~~~--~~----~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 92 (227)
T 1ve3_A 40 GKVLDLACGVG----GFSFLLEDY--GF----EVVGVDISED-----------------MIRKAREYAKSRESNVEFIVG 92 (227)
T ss_dssp CEEEEETCTTS----HHHHHHHHT--TC----EEEEEESCHH-----------------HHHHHHHHHHHTTCCCEEEEC
T ss_pred CeEEEEeccCC----HHHHHHHHc--CC----EEEEEECCHH-----------------HHHHHHHHHHhcCCCceEEEC
Confidence 68999999998 345666665 32 8999987532 223333334444444555443
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
. +.++. +.-..=+.|+.+..+.+|+.. ....+|+.+ +.|+|..++++.
T Consensus 93 d---~~~~~---~~~~~~D~v~~~~~~~~~~~~-----~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 93 D---ARKLS---FEDKTFDYVIFIDSIVHFEPL-----ELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp C---TTSCC---SCTTCEEEEEEESCGGGCCHH-----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---hhcCC---CCCCcEEEEEEcCchHhCCHH-----HHHHHHHHHHHHcCCCcEEEEE
Confidence 2 33222 111122456656554455442 234566665 569998766653
No 27
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.91 E-value=0.66 Score=45.42 Aligned_cols=104 Identities=17% Similarity=0.188 Sum_probs=61.1
Q ss_pred ceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEE
Q 008559 287 NLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINR 366 (561)
Q Consensus 287 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~ 366 (561)
...|+|+|.|.| .+...|+.+- |+ ..++|||+.+.. .-....+.++..+..++|..
T Consensus 23 ~~~vLDiGcG~G----~~~~~l~~~~--~~-~~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~v~~~~ 78 (284)
T 3gu3_A 23 PVHIVDYGCGYG----YLGLVLMPLL--PE-GSKYTGIDSGET-----------------LLAEARELFRLLPYDSEFLE 78 (284)
T ss_dssp CCEEEEETCTTT----HHHHHHTTTS--CT-TCEEEEEESCHH-----------------HHHHHHHHHHSSSSEEEEEE
T ss_pred CCeEEEecCCCC----HHHHHHHHhC--CC-CCEEEEEECCHH-----------------HHHHHHHHHHhcCCceEEEE
Confidence 378999999998 3455666653 22 378999987432 22334444555666566554
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEE-ecc
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILS-ENN 428 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlv-E~e 428 (561)
-. ++++. . ++..=+|-|...|||+.+ +. .+|+. .+-|+|...+++ |.+
T Consensus 79 ~d---~~~~~-----~-~~~fD~v~~~~~l~~~~~----~~-~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 79 GD---ATEIE-----L-NDKYDIAICHAFLLHMTT----PE-TMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SC---TTTCC-----C-SSCEEEEEEESCGGGCSS----HH-HHHHHHHHTEEEEEEEEEEECC
T ss_pred cc---hhhcC-----c-CCCeeEEEECChhhcCCC----HH-HHHHHHHHHcCCCCEEEEEecc
Confidence 33 33332 1 233334445567888854 43 45554 567999977764 544
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.82 E-value=0.25 Score=45.98 Aligned_cols=119 Identities=18% Similarity=0.229 Sum_probs=68.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.|++.+...+. -.|+|+|.|.|. +...|+.+. | ..++|||+.+.. .-+.
T Consensus 19 ~~l~~~l~~~~~-----~~vLDiGcG~G~----~~~~l~~~~---~-~~~v~gvD~s~~-----------------~~~~ 68 (219)
T 3jwg_A 19 GTVVAVLKSVNA-----KKVIDLGCGEGN----LLSLLLKDK---S-FEQITGVDVSYS-----------------VLER 68 (219)
T ss_dssp HHHHHHHHHTTC-----CEEEEETCTTCH----HHHHHHTST---T-CCEEEEEESCHH-----------------HHHH
T ss_pred HHHHHHHhhcCC-----CEEEEecCCCCH----HHHHHHhcC---C-CCEEEEEECCHH-----------------HHHH
Confidence 445566655555 789999999986 566677652 2 479999987532 1222
Q ss_pred HHHHHHhcCc------eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEE
Q 008559 351 LLGFAKSMNI------NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVI 423 (561)
Q Consensus 351 L~~fA~~lgV------pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVv 423 (561)
..+.++..++ .++|..- +++.+... ...=++|+ |...|||+.+ ..+..+|+.+ +.|+|..++
T Consensus 69 a~~~~~~~~~~~~~~~~v~~~~~---d~~~~~~~---~~~fD~V~--~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~~ 137 (219)
T 3jwg_A 69 AKDRLKIDRLPEMQRKRISLFQS---SLVYRDKR---FSGYDAAT--VIEVIEHLDE---NRLQAFEKVLFEFTRPQTVI 137 (219)
T ss_dssp HHHHHTGGGSCHHHHTTEEEEEC---CSSSCCGG---GTTCSEEE--EESCGGGCCH---HHHHHHHHHHHTTTCCSEEE
T ss_pred HHHHHHhhccccccCcceEEEeC---cccccccc---cCCCCEEE--EHHHHHhCCH---HHHHHHHHHHHHhhCCCEEE
Confidence 2222232333 3444433 23222211 11112333 5677888853 2346677766 558999988
Q ss_pred EEeccCC
Q 008559 424 LSENNMD 430 (561)
Q Consensus 424 lvE~ead 430 (561)
++..+..
T Consensus 138 i~~~~~~ 144 (219)
T 3jwg_A 138 VSTPNKE 144 (219)
T ss_dssp EEEEBGG
T ss_pred EEccchh
Confidence 8776655
No 29
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=94.69 E-value=0.47 Score=47.06 Aligned_cols=98 Identities=16% Similarity=0.304 Sum_probs=55.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|. +...|+.+- | .++|||+.... .-+...+.++..|+. .+|.
T Consensus 92 ~~vLDiGcG~G~----~~~~la~~~-~----~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~v~~~ 145 (318)
T 2fk8_A 92 MTLLDIGCGWGT----TMRRAVERF-D----VNVIGLTLSKN-----------------QHARCEQVLASIDTNRSRQVL 145 (318)
T ss_dssp CEEEEESCTTSH----HHHHHHHHH-C----CEEEEEESCHH-----------------HHHHHHHHHHTSCCSSCEEEE
T ss_pred CEEEEEcccchH----HHHHHHHHC-C----CEEEEEECCHH-----------------HHHHHHHHHHhcCCCCceEEE
Confidence 689999999874 444555543 2 38999987532 223333444555654 4443
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.. +++++. ..=++|+ |...|||+.. .....+|+.+ +-|+|...+++
T Consensus 146 --~~-d~~~~~------~~fD~v~--~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 146 --LQ-GWEDFA------EPVDRIV--SIEAFEHFGH---ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp --ES-CGGGCC------CCCSEEE--EESCGGGTCG---GGHHHHHHHHHHHSCTTCEEEE
T ss_pred --EC-ChHHCC------CCcCEEE--EeChHHhcCH---HHHHHHHHHHHHhcCCCcEEEE
Confidence 32 333332 1113333 4456888864 2345566655 66999876665
No 30
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=94.65 E-value=0.53 Score=48.42 Aligned_cols=98 Identities=14% Similarity=0.210 Sum_probs=55.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+- | .+++|+++.+.- .+.|+.. -.++|..-
T Consensus 203 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~~~----------------------~~~a~~~-~~v~~~~~ 251 (364)
T 3p9c_A 203 GTLVDVGGGVGA----TVAAIAAHY---P-TIKGVNFDLPHV----------------------ISEAPQF-PGVTHVGG 251 (364)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEECHHH----------------------HTTCCCC-TTEEEEEC
T ss_pred CEEEEeCCCCCH----HHHHHHHHC---C-CCeEEEecCHHH----------------------HHhhhhc-CCeEEEeC
Confidence 789999999985 455566553 3 589999987321 1111111 12444433
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCEEE-EEeccCC
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKGVI-LSENNMD 430 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~PkvVv-lvE~ead 430 (561)
. +.+ .+ ..+++++ +...||++.+ .....+|+.++ .|+|...+ ++|.-.+
T Consensus 252 D---~~~----~~--p~~D~v~--~~~vlh~~~d---~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 252 D---MFK----EV--PSGDTIL--MKWILHDWSD---QHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp C---TTT----CC--CCCSEEE--EESCGGGSCH---HHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred C---cCC----CC--CCCCEEE--ehHHhccCCH---HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 2 221 11 1234443 4456888875 24567787774 58998744 4565444
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=94.61 E-value=0.79 Score=45.50 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=59.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|. +...|+.+. | .++|||+... +.-+...+.++..|+. .+|.
T Consensus 119 ~~vLDiGcG~G~----~~~~la~~~-~----~~v~gvD~s~-----------------~~~~~a~~~~~~~~~~~~v~~~ 172 (312)
T 3vc1_A 119 DTLVDAGCGRGG----SMVMAHRRF-G----SRVEGVTLSA-----------------AQADFGNRRARELRIDDHVRSR 172 (312)
T ss_dssp CEEEEESCTTSH----HHHHHHHHH-C----CEEEEEESCH-----------------HHHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEecCCCCH----HHHHHHHHc-C----CEEEEEeCCH-----------------HHHHHHHHHHHHcCCCCceEEE
Confidence 689999999883 445566553 1 5799998743 2334445556666765 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.- +++++. ..++..=+|-|...|||+ + ...+|+.+ +-|+|...+++
T Consensus 173 ~~---d~~~~~-----~~~~~fD~V~~~~~l~~~-~-----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 173 VC---NMLDTP-----FDKGAVTASWNNESTMYV-D-----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EC---CTTSCC-----CCTTCEEEEEEESCGGGS-C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred EC---ChhcCC-----CCCCCEeEEEECCchhhC-C-----HHHHHHHHHHHcCCCcEEEE
Confidence 43 333332 333444444456778887 3 44555555 66999876664
No 32
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.57 E-value=0.6 Score=47.89 Aligned_cols=104 Identities=18% Similarity=0.288 Sum_probs=59.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
.+|+|+|.|.|. +...|+.+- | .+++|+++.+ . .++.+.++ +...|+ .++|.
T Consensus 204 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~-~-------------~~~~a~~~----~~~~~l~~~v~~~ 257 (369)
T 3gwz_A 204 ATAVDIGGGRGS----LMAAVLDAF---P-GLRGTLLERP-P-------------VAEEAREL----LTGRGLADRCEIL 257 (369)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEECH-H-------------HHHHHHHH----HHHTTCTTTEEEE
T ss_pred cEEEEeCCCccH----HHHHHHHHC---C-CCeEEEEcCH-H-------------HHHHHHHh----hhhcCcCCceEEe
Confidence 899999999995 556666652 3 5899999872 1 12333333 333444 35555
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCEEEE-EeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKGVIL-SENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~PkvVvl-vE~ead 430 (561)
.... .+. +.. .-+++ -|...||++.+ .....+|+.++ .|+|...++ +|.-..
T Consensus 258 ~~d~--~~~-----~p~-~~D~v--~~~~vlh~~~d---~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 258 PGDF--FET-----IPD-GADVY--LIKHVLHDWDD---DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp ECCT--TTC-----CCS-SCSEE--EEESCGGGSCH---HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ccCC--CCC-----CCC-CceEE--EhhhhhccCCH---HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5432 111 111 12343 34456788764 23456777775 589986555 455444
No 33
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.50 E-value=0.23 Score=57.58 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=75.3
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.|++.+..... -.|+|+|.|.| .+...|+.+ |+| .-+||||+.... -++.+.++
T Consensus 711 e~LLelL~~~~g-----~rVLDVGCGTG----~lai~LAr~--g~p-~a~VtGVDIS~e-------------mLe~AReR 765 (950)
T 3htx_A 711 EYALKHIRESSA-----STLVDFGCGSG----SLLDSLLDY--PTS-LQTIIGVDISPK-------------GLARAAKM 765 (950)
T ss_dssp HHHHHHHHHSCC-----SEEEEETCSSS----HHHHHHTSS--CCC-CCEEEEEESCHH-------------HHHHHHHH
T ss_pred HHHHHHhcccCC-----CEEEEECCCCC----HHHHHHHHh--CCC-CCeEEEEECCHH-------------HHHHHHHH
Confidence 345566654455 78999999999 456667765 334 479999998643 13455556
Q ss_pred HHHH--HHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEec
Q 008559 351 LLGF--AKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSEN 427 (561)
Q Consensus 351 L~~f--A~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ 427 (561)
|... ++..|++ .+..+.. +++++.. ..+..=+|-|...|||+.+ ..+..+|+. .+-|+|.++++...
T Consensus 766 La~~lnAkr~gl~-nVefiqG-Da~dLp~-----~d~sFDlVV~~eVLeHL~d---p~l~~~L~eI~RvLKPG~LIISTP 835 (950)
T 3htx_A 766 LHVKLNKEACNVK-SATLYDG-SILEFDS-----RLHDVDIGTCLEVIEHMEE---DQACEFGEKVLSLFHPKLLIVSTP 835 (950)
T ss_dssp HHHHTTTTCSSCS-EEEEEES-CTTSCCT-----TSCSCCEEEEESCGGGSCH---HHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred hhhccchhhcCCC-ceEEEEC-chHhCCc-----ccCCeeEEEEeCchhhCCh---HHHHHHHHHHHHHcCCCEEEEEec
Confidence 6544 2234543 3333333 4444432 2233334444677899875 234456766 57799998887777
Q ss_pred cCC
Q 008559 428 NMD 430 (561)
Q Consensus 428 ead 430 (561)
+.+
T Consensus 836 N~e 838 (950)
T 3htx_A 836 NYE 838 (950)
T ss_dssp BGG
T ss_pred Cch
Confidence 665
No 34
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.44 E-value=0.59 Score=45.48 Aligned_cols=112 Identities=14% Similarity=0.144 Sum_probs=69.7
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..+++.+...+. -+|+|+|.|.|. +...|+.+ | .++|||+... ..-+.
T Consensus 110 ~~~~~~~~~~~~-----~~vLD~GcG~G~----~~~~l~~~--g----~~v~~vD~s~-----------------~~~~~ 157 (286)
T 3m70_A 110 GDVVDAAKIISP-----CKVLDLGCGQGR----NSLYLSLL--G----YDVTSWDHNE-----------------NSIAF 157 (286)
T ss_dssp HHHHHHHHHSCS-----CEEEEESCTTCH----HHHHHHHT--T----CEEEEEESCH-----------------HHHHH
T ss_pred HHHHHHhhccCC-----CcEEEECCCCCH----HHHHHHHC--C----CeEEEEECCH-----------------HHHHH
Confidence 466677765555 889999999995 55567766 2 4899998753 23344
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.++..|+.++|.... +.++. . ++..=+|-|...|||+.. ..+..+|+.+ +.|+|..++++.
T Consensus 158 a~~~~~~~~~~~~~~~~d---~~~~~-----~-~~~fD~i~~~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 158 LNETKEKENLNISTALYD---INAAN-----I-QENYDFIVSTVVFMFLNR---ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp HHHHHHHTTCCEEEEECC---GGGCC-----C-CSCEEEEEECSSGGGSCG---GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHcCCceEEEEec---ccccc-----c-cCCccEEEEccchhhCCH---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 445566667766555443 22222 1 333333444557888854 3566777776 568999875543
No 35
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=94.43 E-value=0.44 Score=49.05 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=55.7
Q ss_pred ceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEE
Q 008559 287 NLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINR 366 (561)
Q Consensus 287 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~ 366 (561)
.-+|+|+|.|.|. ++..|+.+- | .+++|+++.+.- .+.|+.. -.++|..
T Consensus 204 ~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~~~----------------------~~~a~~~-~~v~~~~ 252 (368)
T 3reo_A 204 LTTIVDVGGGTGA----VASMIVAKY---P-SINAINFDLPHV----------------------IQDAPAF-SGVEHLG 252 (368)
T ss_dssp CSEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEECHHH----------------------HTTCCCC-TTEEEEE
T ss_pred CCEEEEeCCCcCH----HHHHHHHhC---C-CCEEEEEehHHH----------------------HHhhhhc-CCCEEEe
Confidence 3789999999985 555666553 3 589999987321 1111111 1234433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEE-EEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGV-ILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvV-vlvE~ead 430 (561)
-. +.+ .+ ..+++++ +..-||++.+ .....+|+.+ +.|+|... +++|.-..
T Consensus 253 ~d---~~~----~~--p~~D~v~--~~~vlh~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 253 GD---MFD----GV--PKGDAIF--IKWICHDWSD---EHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp CC---TTT----CC--CCCSEEE--EESCGGGBCH---HHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred cC---CCC----CC--CCCCEEE--EechhhcCCH---HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 22 221 11 1234443 3456888875 2455677777 45999874 45565544
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=94.35 E-value=0.47 Score=44.17 Aligned_cols=117 Identities=21% Similarity=0.213 Sum_probs=67.2
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.|++.+...+. -.|+|+|.|.|. +...|+.+. + ..++|||+.... .-+.
T Consensus 19 ~~l~~~l~~~~~-----~~vLDiGcG~G~----~~~~l~~~~--~--~~~v~gvD~s~~-----------------~~~~ 68 (217)
T 3jwh_A 19 NGVVAALKQSNA-----RRVIDLGCGQGN----LLKILLKDS--F--FEQITGVDVSYR-----------------SLEI 68 (217)
T ss_dssp HHHHHHHHHTTC-----CEEEEETCTTCH----HHHHHHHCT--T--CSEEEEEESCHH-----------------HHHH
T ss_pred HHHHHHHHhcCC-----CEEEEeCCCCCH----HHHHHHhhC--C--CCEEEEEECCHH-----------------HHHH
Confidence 345555554455 689999999985 556677652 2 379999987532 2223
Q ss_pred HHHHHHhcCce------EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCEEE
Q 008559 351 LLGFAKSMNIN------LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKGVI 423 (561)
Q Consensus 351 L~~fA~~lgVp------FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~PkvVv 423 (561)
..+.++..+++ ++|..- +++.+... ...=++|+ |...|||+.+ ..+..+|+.++ .|+|..++
T Consensus 69 a~~~~~~~~~~~~~~~~v~~~~~---d~~~~~~~---~~~fD~v~--~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l 137 (217)
T 3jwh_A 69 AQERLDRLRLPRNQWERLQLIQG---ALTYQDKR---FHGYDAAT--VIEVIEHLDL---SRLGAFERVLFEFAQPKIVI 137 (217)
T ss_dssp HHHHHTTCCCCHHHHTTEEEEEC---CTTSCCGG---GCSCSEEE--EESCGGGCCH---HHHHHHHHHHHTTTCCSEEE
T ss_pred HHHHHHHhcCCcccCcceEEEeC---Cccccccc---CCCcCEEe--eHHHHHcCCH---HHHHHHHHHHHHHcCCCEEE
Confidence 33333444443 444433 23222211 11223444 5567888853 34567787764 58999988
Q ss_pred EEecc
Q 008559 424 LSENN 428 (561)
Q Consensus 424 lvE~e 428 (561)
++..+
T Consensus 138 i~~~~ 142 (217)
T 3jwh_A 138 VTTPN 142 (217)
T ss_dssp EEEEB
T ss_pred EEccC
Confidence 87654
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=93.99 E-value=0.36 Score=46.64 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=60.3
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+.-.+. -+|+|+|.|.|. +...|+. | ..++|||+.+. .
T Consensus 24 ~~l~~~~~~~~~-----~~vLDiGcG~G~----~~~~l~~-----~-~~~v~gvD~s~---------------------~ 67 (261)
T 3ege_A 24 NAIINLLNLPKG-----SVIADIGAGTGG----YSVALAN-----Q-GLFVYAVEPSI---------------------V 67 (261)
T ss_dssp HHHHHHHCCCTT-----CEEEEETCTTSH----HHHHHHT-----T-TCEEEEECSCH---------------------H
T ss_pred HHHHHHhCCCCC-----CEEEEEcCcccH----HHHHHHh-----C-CCEEEEEeCCH---------------------H
Confidence 445555544444 789999999986 3444554 2 36899998742 2
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCE-EEEEecc
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKG-VILSENN 428 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~Pkv-VvlvE~e 428 (561)
..+.|+... ..+|..- .++++. ..++..=+|-|.+.|||+.+ + ..+|+. .+.|+ .. +++++.+
T Consensus 68 ~~~~a~~~~-~~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 68 MRQQAVVHP-QVEWFTG---YAENLA-----LPDKSVDGVISILAIHHFSH----L-EKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHSSCCCT-TEEEECC---CTTSCC-----SCTTCBSEEEEESCGGGCSS----H-HHHHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHhcc-CCEEEEC---chhhCC-----CCCCCEeEEEEcchHhhccC----H-HHHHHHHHHHhC-CcEEEEEEcC
Confidence 223333322 3344322 333332 33333334445566888843 3 345554 46688 75 7777766
Q ss_pred CC
Q 008559 429 MD 430 (561)
Q Consensus 429 ad 430 (561)
..
T Consensus 133 ~~ 134 (261)
T 3ege_A 133 IR 134 (261)
T ss_dssp GG
T ss_pred Cc
Confidence 55
No 38
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=93.67 E-value=0.52 Score=43.97 Aligned_cols=107 Identities=13% Similarity=0.175 Sum_probs=60.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
+.+++.+..... .-+|+|+|.|.|. +...|+.+ |+ ++|||+....
T Consensus 31 ~~~~~~l~~~~~----~~~vLDiGcG~G~----~~~~l~~~--~~----~v~gvD~s~~--------------------- 75 (250)
T 2p7i_A 31 PFMVRAFTPFFR----PGNLLELGSFKGD----FTSRLQEH--FN----DITCVEASEE--------------------- 75 (250)
T ss_dssp HHHHHHHGGGCC----SSCEEEESCTTSH----HHHHHTTT--CS----CEEEEESCHH---------------------
T ss_pred HHHHHHHHhhcC----CCcEEEECCCCCH----HHHHHHHh--CC----cEEEEeCCHH---------------------
Confidence 456666653221 1579999999985 45666664 32 6899987431
Q ss_pred HHHHHHhcCc-eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH--hcCCCEEEEEe
Q 008559 351 LLGFAKSMNI-NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR--SLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgV-pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR--~L~PkvVvlvE 426 (561)
..+.|+..-- .++|... .++++ ..++..=+|-|...|||+.+ + ..+|+.++ -|+|...+++.
T Consensus 76 ~~~~a~~~~~~~v~~~~~---d~~~~------~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 76 AISHAQGRLKDGITYIHS---RFEDA------QLPRRYDNIVLTHVLEHIDD----P-VALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp HHHHHHHHSCSCEEEEES---CGGGC------CCSSCEEEEEEESCGGGCSS----H-HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHhhhCCeEEEEc---cHHHc------CcCCcccEEEEhhHHHhhcC----H-HHHHHHHHHHhcCCCCEEEEE
Confidence 2222322211 3344332 23332 12333434556678999864 3 56777765 68998766653
No 39
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=93.57 E-value=0.33 Score=46.02 Aligned_cols=114 Identities=14% Similarity=0.199 Sum_probs=61.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..+++.+...+. .+|+|+|.|.|. +...|+.+- ..++|+|+.... .-+.
T Consensus 83 ~~~l~~l~~~~~-----~~vLDiG~G~G~----~~~~l~~~~-----~~~v~~vD~s~~-----------------~~~~ 131 (254)
T 1xtp_A 83 RNFIASLPGHGT-----SRALDCGAGIGR----ITKNLLTKL-----YATTDLLEPVKH-----------------MLEE 131 (254)
T ss_dssp HHHHHTSTTCCC-----SEEEEETCTTTH----HHHHTHHHH-----CSEEEEEESCHH-----------------HHHH
T ss_pred HHHHHhhcccCC-----CEEEEECCCcCH----HHHHHHHhh-----cCEEEEEeCCHH-----------------HHHH
Confidence 344555543344 789999999986 344444431 257999987431 1122
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
..+.++.. -..+|... .++++ ...++..=+|-|...|||+.+ .....+|+.+ +.|+|..++++..
T Consensus 132 a~~~~~~~-~~~~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 132 AKRELAGM-PVGKFILA---SMETA-----TLPPNTYDLIVIQWTAIYLTD---ADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp HHHHTTTS-SEEEEEES---CGGGC-----CCCSSCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccC-CceEEEEc---cHHHC-----CCCCCCeEEEEEcchhhhCCH---HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 22222221 23444332 23322 233343434445668899864 2345566655 6699998777644
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.53 E-value=1.2 Score=42.75 Aligned_cols=129 Identities=13% Similarity=0.078 Sum_probs=73.5
Q ss_pred HhhccCCCCCchhHhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcC
Q 008559 254 NFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQN 333 (561)
Q Consensus 254 ~f~e~sP~~kfahftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~ 333 (561)
.+|+-.+...-.+...-..+++.+..- ...-+|+|+|.|.| .+...|+.++ ..++|||+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~~vLDiGcG~G----~~~~~la~~~-----~~~v~gvD~s~----- 79 (267)
T 3kkz_A 18 DFFSNMERQGPGSPEVTLKALSFIDNL----TEKSLIADIGCGTG----GQTMVLAGHV-----TGQVTGLDFLS----- 79 (267)
T ss_dssp HHHHTSSCSSSCCHHHHHHHHTTCCCC----CTTCEEEEETCTTC----HHHHHHHTTC-----SSEEEEEESCH-----
T ss_pred HHHhhccccCCCCHHHHHHHHHhcccC----CCCCEEEEeCCCCC----HHHHHHHhcc-----CCEEEEEeCCH-----
Confidence 344444444333433444455555411 12378999999987 4566677762 47999998753
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHH
Q 008559 334 AETPFSVGPPGDNYSLQLLGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFL 411 (561)
Q Consensus 334 ~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L 411 (561)
..-+...+.++..|++ ++|... +++++. ..++..=+|-|...+||+ + + ..+|
T Consensus 80 ------------~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~-----~~~~~fD~i~~~~~~~~~-~----~-~~~l 133 (267)
T 3kkz_A 80 ------------GFIDIFNRNARQSGLQNRVTGIVG---SMDDLP-----FRNEELDLIWSEGAIYNI-G----F-ERGL 133 (267)
T ss_dssp ------------HHHHHHHHHHHHTTCTTTEEEEEC---CTTSCC-----CCTTCEEEEEESSCGGGT-C----H-HHHH
T ss_pred ------------HHHHHHHHHHHHcCCCcCcEEEEc---ChhhCC-----CCCCCEEEEEEcCCceec-C----H-HHHH
Confidence 2334445555666765 555443 333332 333444455566678887 3 3 4555
Q ss_pred HHH-HhcCCCEEEEEe
Q 008559 412 RVL-RSLEPKGVILSE 426 (561)
Q Consensus 412 ~~I-R~L~PkvVvlvE 426 (561)
+.+ +-|+|..++++.
T Consensus 134 ~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 134 NEWRKYLKKGGYLAVS 149 (267)
T ss_dssp HHHGGGEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEE
Confidence 555 669999777653
No 41
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=93.42 E-value=1.1 Score=41.05 Aligned_cols=45 Identities=27% Similarity=0.459 Sum_probs=34.2
Q ss_pred hhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 268 IANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 268 tANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
...+.|++.+..... -+|+|+|.|.| .+...|+.+ | .++|||+..
T Consensus 39 ~~~~~~~~~~~~~~~-----~~vLdiG~G~G----~~~~~l~~~--~----~~v~~vD~s 83 (227)
T 3e8s_A 39 VTDQAILLAILGRQP-----ERVLDLGCGEG----WLLRALADR--G----IEAVGVDGD 83 (227)
T ss_dssp THHHHHHHHHHHTCC-----SEEEEETCTTC----HHHHHHHTT--T----CEEEEEESC
T ss_pred cccHHHHHHhhcCCC-----CEEEEeCCCCC----HHHHHHHHC--C----CEEEEEcCC
Confidence 355678888877666 89999999998 456677776 2 489999874
No 42
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=93.41 E-value=0.69 Score=46.37 Aligned_cols=105 Identities=19% Similarity=0.164 Sum_probs=60.7
Q ss_pred ceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEE
Q 008559 287 NLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQI 364 (561)
Q Consensus 287 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF 364 (561)
..+|+|+|.|.| .+...|+.+- | .+++|+++.+ . .++.+.++ ++..++. ++|
T Consensus 170 ~~~vlDvG~G~G----~~~~~l~~~~---p-~~~~~~~D~~-~-------------~~~~a~~~----~~~~~~~~~v~~ 223 (332)
T 3i53_A 170 LGHVVDVGGGSG----GLLSALLTAH---E-DLSGTVLDLQ-G-------------PASAAHRR----FLDTGLSGRAQV 223 (332)
T ss_dssp GSEEEEETCTTS----HHHHHHHHHC---T-TCEEEEEECH-H-------------HHHHHHHH----HHHTTCTTTEEE
T ss_pred CCEEEEeCCChh----HHHHHHHHHC---C-CCeEEEecCH-H-------------HHHHHHHh----hhhcCcCcCeEE
Confidence 479999999999 5566666653 3 5899999762 1 12333333 3344443 566
Q ss_pred EEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-EeccCC
Q 008559 365 NRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SENNMD 430 (561)
Q Consensus 365 ~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ead 430 (561)
..... .+.+ .. .-+ +|-|...||++.+ .....+|+.+ +.|+|...++ +|.-..
T Consensus 224 ~~~d~--~~~~-----p~-~~D--~v~~~~vlh~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 224 VVGSF--FDPL-----PA-GAG--GYVLSAVLHDWDD---LSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp EECCT--TSCC-----CC-SCS--EEEEESCGGGSCH---HHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred ecCCC--CCCC-----CC-CCc--EEEEehhhccCCH---HHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 55432 1111 11 122 3344567888865 2356777776 5589986654 455444
No 43
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.40 E-value=0.43 Score=45.30 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=53.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|.--..|.+.+ | ..++|+|+.... ..+.|+...-.++|...
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~-------~-~~~v~~~D~s~~---------------------~~~~a~~~~~~~~~~~~ 85 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRY-------G-VNVITGIDSDDD---------------------MLEKAADRLPNTNFGKA 85 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHH-------C-TTSEEEEESCHH---------------------HHHHHHHHSTTSEEEEC
T ss_pred CEEEEecCcCCHHHHHHHHhC-------C-CCEEEEEECCHH---------------------HHHHHHHhCCCcEEEEC
Confidence 689999999987544444433 2 357899987431 22233322223344333
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.++++. .++..=+|-|...|||+.+ ...+|+.+ +.|+|...+++..
T Consensus 86 ---d~~~~~------~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 86 ---DLATWK------PAQKADLLYANAVFQWVPD-----HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ---CTTTCC------CSSCEEEEEEESCGGGSTT-----HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ---ChhhcC------ccCCcCEEEEeCchhhCCC-----HHHHHHHHHHhcCCCeEEEEEe
Confidence 233322 1232334445677888853 34556655 6799997776643
No 44
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.24 E-value=0.78 Score=45.85 Aligned_cols=106 Identities=13% Similarity=0.166 Sum_probs=58.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
.+|+|+|.|.|. +...|+.+- | .+++|+++. .. -++.+.+++.+.. +.-.++|..-
T Consensus 169 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~~-------------~~~~a~~~~~~~~--~~~~v~~~~~ 224 (334)
T 2ip2_A 169 RSFVDVGGGSGE----LTKAILQAE---P-SARGVMLDR-EG-------------SLGVARDNLSSLL--AGERVSLVGG 224 (334)
T ss_dssp CEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEEC-TT-------------CTHHHHHHTHHHH--HTTSEEEEES
T ss_pred CEEEEeCCCchH----HHHHHHHHC---C-CCEEEEeCc-HH-------------HHHHHHHHHhhcC--CCCcEEEecC
Confidence 689999999994 555666553 3 479999998 32 1344555544331 1112444433
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-EeccCC
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SENNMD 430 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ead 430 (561)
. +.+ .+. ..-++++ +...||++.+ .....+|+.+ +.|+|...++ +|....
T Consensus 225 d---~~~----~~~-~~~D~v~--~~~vl~~~~~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 225 D---MLQ----EVP-SNGDIYL--LSRIIGDLDE---AASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp C---TTT----CCC-SSCSEEE--EESCGGGCCH---HHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred C---CCC----CCC-CCCCEEE--EchhccCCCH---HHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 2 221 111 1123443 4566888754 2345677776 5589987554 555443
No 45
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=93.23 E-value=0.95 Score=44.77 Aligned_cols=105 Identities=17% Similarity=0.111 Sum_probs=61.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|. +...|+.+ ..| ..++|||+... +.-....+.++..|+. ++|.
T Consensus 120 ~~vLDiGcG~G~----~~~~la~~--~~~-~~~v~gvD~s~-----------------~~~~~a~~~~~~~~~~~~v~~~ 175 (305)
T 3ocj_A 120 CVVASVPCGWMS----ELLALDYS--ACP-GVQLVGIDYDP-----------------EALDGATRLAAGHALAGQITLH 175 (305)
T ss_dssp CEEEETTCTTCH----HHHTSCCT--TCT-TCEEEEEESCH-----------------HHHHHHHHHHTTSTTGGGEEEE
T ss_pred CEEEEecCCCCH----HHHHHHHh--cCC-CCeEEEEECCH-----------------HHHHHHHHHHHhcCCCCceEEE
Confidence 689999999883 34445422 123 48999998743 2334444555666666 5555
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.-. +.++. .. +..=+|-|...+||+.+. .....+|+.+ +.|+|..++++..
T Consensus 176 ~~d---~~~~~-----~~-~~fD~v~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 176 RQD---AWKLD-----TR-EGYDLLTSNGLNIYEPDD--ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECC---GGGCC-----CC-SCEEEEECCSSGGGCCCH--HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECc---hhcCC-----cc-CCeEEEEECChhhhcCCH--HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 433 22222 22 333344455678888652 2333567766 5699998888743
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=93.21 E-value=1.3 Score=41.89 Aligned_cols=112 Identities=18% Similarity=0.198 Sum_probs=65.0
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
.-..|++.+.-.+. -+|+|+|.|.|. +...|+.+- | .++|||+... +.-
T Consensus 24 ~~~~l~~~~~~~~~-----~~VLDiGcG~G~----~~~~la~~~-~----~~v~gvD~s~-----------------~~l 72 (256)
T 1nkv_A 24 KYATLGRVLRMKPG-----TRILDLGSGSGE----MLCTWARDH-G----ITGTGIDMSS-----------------LFT 72 (256)
T ss_dssp HHHHHHHHTCCCTT-----CEEEEETCTTCH----HHHHHHHHT-C----CEEEEEESCH-----------------HHH
T ss_pred HHHHHHHhcCCCCC-----CEEEEECCCCCH----HHHHHHHhc-C----CeEEEEeCCH-----------------HHH
Confidence 34455555543344 689999999986 344555543 2 3679998753 223
Q ss_pred HHHHHHHHhcCce--EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 349 LQLLGFAKSMNIN--LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 349 ~rL~~fA~~lgVp--FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
+...+.++..|+. ++|... +++++. . ++..=+|-|...+||+.+ + ..+|+.+ |-|+|...+++
T Consensus 73 ~~a~~~~~~~~~~~~v~~~~~---d~~~~~-----~-~~~fD~V~~~~~~~~~~~----~-~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 73 AQAKRRAEELGVSERVHFIHN---DAAGYV-----A-NEKCDVAACVGATWIAGG----F-AGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp HHHHHHHHHTTCTTTEEEEES---CCTTCC-----C-SSCEEEEEEESCGGGTSS----S-HHHHHHHTTSEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcceEEEEC---ChHhCC-----c-CCCCCEEEECCChHhcCC----H-HHHHHHHHHHcCCCeEEEE
Confidence 4444555566664 666543 333332 1 233334445677888864 3 4555555 56899976665
No 47
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=93.14 E-value=0.74 Score=42.26 Aligned_cols=110 Identities=19% Similarity=0.221 Sum_probs=65.0
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
...|++.+..... .-+|+|+|.|.|. +...|+.+ | .++|||+...
T Consensus 34 ~~~~~~~l~~~~~----~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~~D~s~--------------------- 78 (218)
T 3ou2_A 34 APAALERLRAGNI----RGDVLELASGTGY----WTRHLSGL--A----DRVTALDGSA--------------------- 78 (218)
T ss_dssp HHHHHHHHTTTTS----CSEEEEESCTTSH----HHHHHHHH--S----SEEEEEESCH---------------------
T ss_pred HHHHHHHHhcCCC----CCeEEEECCCCCH----HHHHHHhc--C----CeEEEEeCCH---------------------
Confidence 5567777764322 1489999999985 55556655 2 4899998742
Q ss_pred HHHHHHHhcC-ceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 350 QLLGFAKSMN-INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 350 rL~~fA~~lg-VpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
...+.|+..+ -.++|... +++++ ..++..=+|-|...|||+.+ ..+..+|+.+ +.|+|..++++.
T Consensus 79 ~~~~~a~~~~~~~~~~~~~---d~~~~------~~~~~~D~v~~~~~l~~~~~---~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 79 EMIAEAGRHGLDNVEFRQQ---DLFDW------TPDRQWDAVFFAHWLAHVPD---DRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp HHHHHHGGGCCTTEEEEEC---CTTSC------CCSSCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCeEEEec---ccccC------CCCCceeEEEEechhhcCCH---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 2334444445 33444433 23222 22333444555678999864 2356677766 568998766643
No 48
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=92.90 E-value=1.3 Score=43.27 Aligned_cols=103 Identities=15% Similarity=0.202 Sum_probs=59.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|..-.. |+.+. | .++|||+.+.. .-....+.++..|++ ++|.
T Consensus 84 ~~vLDiGcG~G~~~~~----l~~~~-~----~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 137 (297)
T 2o57_A 84 AKGLDLGAGYGGAARF----LVRKF-G----VSIDCLNIAPV-----------------QNKRNEEYNNQAGLADNITVK 137 (297)
T ss_dssp CEEEEETCTTSHHHHH----HHHHH-C----CEEEEEESCHH-----------------HHHHHHHHHHHHTCTTTEEEE
T ss_pred CEEEEeCCCCCHHHHH----HHHHh-C----CEEEEEeCCHH-----------------HHHHHHHHHHhcCCCcceEEE
Confidence 7999999998864443 44432 1 38999987532 222333334444543 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE-eccC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS-ENNM 429 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv-E~ea 429 (561)
.. .++++ ...++..=+|-|...|||+.+ + ..+|+.+ |-|+|...+++ +...
T Consensus 138 ~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 138 YG---SFLEI-----PCEDNSYDFIWSQDAFLHSPD----K-LKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EC---CTTSC-----SSCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred Ec---CcccC-----CCCCCCEeEEEecchhhhcCC----H-HHHHHHHHHHcCCCeEEEEEEecc
Confidence 33 23332 233444556667788999864 3 4555555 66999876654 4433
No 49
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=92.77 E-value=0.85 Score=44.89 Aligned_cols=104 Identities=11% Similarity=0.169 Sum_probs=59.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+-+ .++|||+.+.. .-+...+.++..|++-.++.+
T Consensus 74 ~~vLDiGcG~G~----~~~~la~~~~-----~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~v~~~ 127 (302)
T 3hem_A 74 MTLLDIGCGWGS----TMRHAVAEYD-----VNVIGLTLSEN-----------------QYAHDKAMFDEVDSPRRKEVR 127 (302)
T ss_dssp CEEEEETCTTSH----HHHHHHHHHC-----CEEEEEECCHH-----------------HHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEeeccCcH----HHHHHHHhCC-----CEEEEEECCHH-----------------HHHHHHHHHHhcCCCCceEEE
Confidence 789999999874 4455555531 57999987532 223344445556765223333
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCC----CCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHS----TPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~e----s~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. +++++ -..=+.|+ +...+||+.+. .......+|+.+ +-|+|...+++.
T Consensus 128 ~~-d~~~~------~~~fD~v~--~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 128 IQ-GWEEF------DEPVDRIV--SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp EC-CGGGC------CCCCSEEE--EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred EC-CHHHc------CCCccEEE--EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 32 33332 11113444 44678899753 224456777766 569999777653
No 50
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=92.72 E-value=1.7 Score=44.44 Aligned_cols=97 Identities=19% Similarity=0.280 Sum_probs=54.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. ++..|+.+- | .+++|+++.+ .. .+.|+.+. .++|..-
T Consensus 211 ~~vLDvG~G~G~----~~~~l~~~~---~-~~~~~~~D~~-~~---------------------~~~a~~~~-~v~~~~~ 259 (372)
T 1fp1_D 211 STLVDVGGGSGR----NLELIISKY---P-LIKGINFDLP-QV---------------------IENAPPLS-GIEHVGG 259 (372)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEECH-HH---------------------HTTCCCCT-TEEEEEC
T ss_pred CEEEEeCCCCcH----HHHHHHHHC---C-CCeEEEeChH-HH---------------------HHhhhhcC-CCEEEeC
Confidence 789999999985 456666653 3 5899999862 11 11122211 1344332
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-EeccC
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SENNM 429 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ea 429 (561)
. +.+ .+ ++ .=+|-+...|||+.+ .....+|+.+ +.|+|...++ +|...
T Consensus 260 d---~~~----~~---~~-~D~v~~~~~lh~~~d---~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 260 D---MFA----SV---PQ-GDAMILKAVCHNWSD---EKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp C---TTT----CC---CC-EEEEEEESSGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred C---ccc----CC---CC-CCEEEEecccccCCH---HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 2 211 11 11 334445677899865 2344677776 5589987555 45443
No 51
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=92.57 E-value=1.9 Score=39.72 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=58.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.| .+...|+.+ | -++|||+.... .-+...+.++..+ .++|...
T Consensus 53 ~~vLDiGcG~G----~~~~~l~~~--~----~~v~~vD~s~~-----------------~~~~a~~~~~~~~-~~~~~~~ 104 (216)
T 3ofk_A 53 SNGLEIGCAAG----AFTEKLAPH--C----KRLTVIDVMPR-----------------AIGRACQRTKRWS-HISWAAT 104 (216)
T ss_dssp EEEEEECCTTS----HHHHHHGGG--E----EEEEEEESCHH-----------------HHHHHHHHTTTCS-SEEEEEC
T ss_pred CcEEEEcCCCC----HHHHHHHHc--C----CEEEEEECCHH-----------------HHHHHHHhcccCC-CeEEEEc
Confidence 89999999999 355667765 2 48999987532 1222222223233 3444433
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.++++. .++..=+|-|...|||+.+ +..+..+|+.+ +.|+|..++++..
T Consensus 105 ---d~~~~~------~~~~fD~v~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 105 ---DILQFS------TAELFDLIVVAEVLYYLED--MTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---CTTTCC------CSCCEEEEEEESCGGGSSS--HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---chhhCC------CCCCccEEEEccHHHhCCC--HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 333332 1233334555678899875 13344556555 6699998877644
No 52
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=92.49 E-value=1.6 Score=39.30 Aligned_cols=112 Identities=18% Similarity=0.210 Sum_probs=64.3
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
++.|++.+...+. -+|+|+|.|.|. +...|+.+ | .++|+|+.... .-.
T Consensus 21 ~~~l~~~~~~~~~-----~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~s~~-----------------~~~ 68 (199)
T 2xvm_A 21 HSEVLEAVKVVKP-----GKTLDLGCGNGR----NSLYLAAN--G----YDVDAWDKNAM-----------------SIA 68 (199)
T ss_dssp CHHHHHHTTTSCS-----CEEEEETCTTSH----HHHHHHHT--T----CEEEEEESCHH-----------------HHH
T ss_pred cHHHHHHhhccCC-----CeEEEEcCCCCH----HHHHHHHC--C----CeEEEEECCHH-----------------HHH
Confidence 3467777765554 699999999886 44566665 2 48999987532 223
Q ss_pred HHHHHHHhcCc-eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 350 QLLGFAKSMNI-NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 350 rL~~fA~~lgV-pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
...+.++..++ .++|.... +.++. . ++..=+|-+...|||+.. .....+|+.+ +.|+|..++++
T Consensus 69 ~a~~~~~~~~~~~~~~~~~d---~~~~~-----~-~~~~D~v~~~~~l~~~~~---~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 69 NVERIKSIENLDNLHTRVVD---LNNLT-----F-DRQYDFILSTVVLMFLEA---KTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp HHHHHHHHHTCTTEEEEECC---GGGCC-----C-CCCEEEEEEESCGGGSCG---GGHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEcc---hhhCC-----C-CCCceEEEEcchhhhCCH---HHHHHHHHHHHHhcCCCeEEEE
Confidence 33333344454 44544332 22221 2 333323334567888753 2455666665 56899987543
No 53
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=92.17 E-value=1.3 Score=44.89 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=24.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAP 326 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~ 326 (561)
-+|+|+|.|.|. +...|+.+- | .+++|+++.
T Consensus 190 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~ 220 (352)
T 1fp2_A 190 ESIVDVGGGTGT----TAKIICETF---P-KLKCIVFDR 220 (352)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEEC
T ss_pred ceEEEeCCCccH----HHHHHHHHC---C-CCeEEEeeC
Confidence 689999999994 566666653 3 479999987
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.13 E-value=0.72 Score=42.57 Aligned_cols=95 Identities=22% Similarity=0.357 Sum_probs=55.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+ | .++|||+..... ++.+.+++ ++.|.. .
T Consensus 45 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~s~~~-------------~~~a~~~~-------~~~~~~--~ 92 (211)
T 3e23_A 45 AKILELGCGAGY----QAEAMLAA--G----FDVDATDGSPEL-------------AAEASRRL-------GRPVRT--M 92 (211)
T ss_dssp CEEEESSCTTSH----HHHHHHHT--T----CEEEEEESCHHH-------------HHHHHHHH-------TSCCEE--C
T ss_pred CcEEEECCCCCH----HHHHHHHc--C----CeEEEECCCHHH-------------HHHHHHhc-------CCceEE--e
Confidence 589999999986 55666665 2 489999874321 12222221 444322 1
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.++.+ . .++..=+|-|...|||+.. .....+|+.+ +.|+|..++++.
T Consensus 93 ---d~~~~-----~-~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 93 ---LFHQL-----D-AIDAYDAVWAHACLLHVPR---DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ---CGGGC-----C-CCSCEEEEEECSCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---eeccC-----C-CCCcEEEEEecCchhhcCH---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 22222 2 2333434556678888863 2455666666 558999877765
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=91.25 E-value=1.8 Score=40.25 Aligned_cols=114 Identities=11% Similarity=0.149 Sum_probs=63.2
Q ss_pred HHHHHHHhcC--ccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 271 SSILQILAQD--RHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 271 qAILEA~~g~--~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
..|.+.+... +. -+|+|+|.|.|.- ...|+.+ | .++|||+.... .-
T Consensus 25 ~~~~~~l~~~~~~~-----~~vLdiG~G~G~~----~~~l~~~--~----~~~~~~D~s~~-----------------~~ 72 (246)
T 1y8c_A 25 DFIIEKCVENNLVF-----DDYLDLACGTGNL----TENLCPK--F----KNTWAVDLSQE-----------------ML 72 (246)
T ss_dssp HHHHHHHHTTTCCT-----TEEEEETCTTSTT----HHHHGGG--S----SEEEEECSCHH-----------------HH
T ss_pred HHHHHHHHHhCCCC-----CeEEEeCCCCCHH----HHHHHHC--C----CcEEEEECCHH-----------------HH
Confidence 3455555433 33 7899999999873 4455555 2 47999987432 22
Q ss_pred HHHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeec-cccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 349 LQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQF-RLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 349 ~rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f-~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
....+.+...++.++|... .+.++. .. +..=+|-|.. .|||+.+ +.....+|+.+ +.|+|..+++++
T Consensus 73 ~~a~~~~~~~~~~~~~~~~---d~~~~~-----~~-~~fD~v~~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 73 SEAENKFRSQGLKPRLACQ---DISNLN-----IN-RKFDLITCCLDSTNYIID--SDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp HHHHHHHHHTTCCCEEECC---CGGGCC-----CS-CCEEEEEECTTGGGGCCS--HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHhhcCCCeEEEec---ccccCC-----cc-CCceEEEEcCccccccCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2233333444554444332 222222 22 3232333555 7889853 12455677766 458999888874
Q ss_pred c
Q 008559 427 N 427 (561)
Q Consensus 427 ~ 427 (561)
.
T Consensus 142 ~ 142 (246)
T 1y8c_A 142 I 142 (246)
T ss_dssp E
T ss_pred e
Confidence 3
No 56
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=90.86 E-value=1.1 Score=46.14 Aligned_cols=115 Identities=12% Similarity=0.107 Sum_probs=63.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc-C----ceE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM-N----INL 362 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l-g----VpF 362 (561)
-+|+|+|.|.|. +...|+.+- | | ..++|||+.... -++.+.+++.+.+..+ | -.+
T Consensus 85 ~~VLDlGcG~G~----~~~~la~~~-~-~-~~~v~gvD~s~~-------------~l~~a~~~~~~~~~~~~g~~~~~~v 144 (383)
T 4fsd_A 85 ATVLDLGCGTGR----DVYLASKLV-G-E-HGKVIGVDMLDN-------------QLEVARKYVEYHAEKFFGSPSRSNV 144 (383)
T ss_dssp CEEEEESCTTSH----HHHHHHHHH-T-T-TCEEEEEECCHH-------------HHHHHHHTHHHHHHHHHSSTTCCCE
T ss_pred CEEEEecCccCH----HHHHHHHHh-C-C-CCEEEEEECCHH-------------HHHHHHHHHHHhhhhcccccCCCce
Confidence 689999999984 333444431 1 2 369999987542 1344555555554443 3 345
Q ss_pred EEEEEecCCCCCCccc-cccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE-eccCC
Q 008559 363 QINRLESHPLQDLSSQ-MVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS-ENNMD 430 (561)
Q Consensus 363 eF~~V~~~~le~L~~~-~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv-E~ead 430 (561)
+|..- .++++... ...+.++..=+|-+...|||+.+ + ..+|+.+ |-|+|..++++ +...+
T Consensus 145 ~~~~~---d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d----~-~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 145 RFLKG---FIENLATAEPEGVPDSSVDIVISNCVCNLSTN----K-LALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp EEEES---CTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred EEEEc---cHHHhhhcccCCCCCCCEEEEEEccchhcCCC----H-HHHHHHHHHHcCCCCEEEEEEeccc
Confidence 55443 33333111 11233443444445567788753 3 4555555 66999977665 44433
No 57
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=90.48 E-value=2.7 Score=39.67 Aligned_cols=101 Identities=17% Similarity=0.273 Sum_probs=55.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+.+.. .-....+-++..++.++|...
T Consensus 43 ~~vLDlGcG~G~----~~~~l~~~--~----~~v~gvD~s~~-----------------~l~~a~~~~~~~~~~v~~~~~ 95 (252)
T 1wzn_A 43 RRVLDLACGTGI----PTLELAER--G----YEVVGLDLHEE-----------------MLRVARRKAKERNLKIEFLQG 95 (252)
T ss_dssp CEEEEETCTTCH----HHHHHHHT--T----CEEEEEESCHH-----------------HHHHHHHHHHHTTCCCEEEES
T ss_pred CEEEEeCCCCCH----HHHHHHHC--C----CeEEEEECCHH-----------------HHHHHHHHHHhcCCceEEEEC
Confidence 689999999984 44556665 2 48999987532 223333334445665555443
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeecc-ccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFR-LHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~-LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
. +.++. .. +..=+|-|.+. +|++.. .....+|+.+ +.|+|..+++++-
T Consensus 96 d---~~~~~-----~~-~~fD~v~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 96 D---VLEIA-----FK-NEFDAVTMFFSTIMYFDE---EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp C---GGGCC-----CC-SCEEEEEECSSGGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C---hhhcc-----cC-CCccEEEEcCCchhcCCH---HHHHHHHHHHHHHcCCCeEEEEec
Confidence 2 22222 11 22222223332 344321 3456667665 5599999888764
No 58
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=90.47 E-value=2.5 Score=42.88 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=24.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+.+- | .+++|+++.+
T Consensus 195 ~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~ 226 (358)
T 1zg3_A 195 ESLVDVGGGTGG----VTKLIHEIF---P-HLKCTVFDQP 226 (358)
T ss_dssp SEEEEETCTTSH----HHHHHHHHC---T-TSEEEEEECH
T ss_pred CEEEEECCCcCH----HHHHHHHHC---C-CCeEEEeccH
Confidence 689999999984 556666653 3 5899999863
No 59
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=90.46 E-value=3.4 Score=40.44 Aligned_cols=105 Identities=13% Similarity=0.100 Sum_probs=59.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc---CceEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM---NINLQI 364 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l---gVpFeF 364 (561)
-+|+|+|.|.|. +...|+.+- +| ..++|||+.... .-....+.++.. .-.++|
T Consensus 38 ~~vLDiGcG~G~----~~~~la~~~--~~-~~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~~v~~ 93 (299)
T 3g5t_A 38 KLLVDVGCGPGT----ATLQMAQEL--KP-FEQIIGSDLSAT-----------------MIKTAEVIKEGSPDTYKNVSF 93 (299)
T ss_dssp SEEEEETCTTTH----HHHHHHHHS--SC-CSEEEEEESCHH-----------------HHHHHHHHHHHCC-CCTTEEE
T ss_pred CEEEEECCCCCH----HHHHHHHhC--CC-CCEEEEEeCCHH-----------------HHHHHHHHHHhccCCCCceEE
Confidence 789999999983 455555431 12 478999987532 122222223333 334555
Q ss_pred EEEecCCCCCCcccc-ccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 365 NRLESHPLQDLSSQM-VSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 365 ~~V~~~~le~L~~~~-L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
... .++++.... ..+..+..=+|-|...|||+ + + ..+|+.+ +.|+|..++++
T Consensus 94 ~~~---d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~----~-~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 94 KIS---SSDDFKFLGADSVDKQKIDMITAVECAHWF-D----F-EKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEC---CTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C----H-HHHHHHHHHHEEEEEEEEE
T ss_pred EEc---CHHhCCccccccccCCCeeEEeHhhHHHHh-C----H-HHHHHHHHHhcCCCcEEEE
Confidence 443 344443221 11223555566677789998 3 3 4455554 66999987765
No 60
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=90.27 E-value=0.9 Score=46.04 Aligned_cols=112 Identities=12% Similarity=0.151 Sum_probs=60.9
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHH
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL 351 (561)
.|++.+.-... -+|+|+|.|.|. +...|+.+- | .+++|+++.+... .
T Consensus 175 ~~~~~~~~~~~-----~~vLDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~~~~~------------------~-- 221 (348)
T 3lst_A 175 ILARAGDFPAT-----GTVADVGGGRGG----FLLTVLREH---P-GLQGVLLDRAEVV------------------A-- 221 (348)
T ss_dssp HHHHHSCCCSS-----EEEEEETCTTSH----HHHHHHHHC---T-TEEEEEEECHHHH------------------T--
T ss_pred HHHHhCCccCC-----ceEEEECCccCH----HHHHHHHHC---C-CCEEEEecCHHHh------------------h--
Confidence 45555543334 799999999985 455565543 3 5899999874210 0
Q ss_pred HHHHHhcCc--eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE-Eec
Q 008559 352 LGFAKSMNI--NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL-SEN 427 (561)
Q Consensus 352 ~~fA~~lgV--pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl-vE~ 427 (561)
.+.++..++ .++|..-.. .+.+ . .-++ |-+...|||+.+ .....+|+.+ +.|+|...++ +|.
T Consensus 222 ~~~~~~~~~~~~v~~~~~d~--~~~~-----p--~~D~--v~~~~vlh~~~d---~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 222 RHRLDAPDVAGRWKVVEGDF--LREV-----P--HADV--HVLKRILHNWGD---EDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp TCCCCCGGGTTSEEEEECCT--TTCC-----C--CCSE--EEEESCGGGSCH---HHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred cccccccCCCCCeEEEecCC--CCCC-----C--CCcE--EEEehhccCCCH---HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 111111222 255544332 1111 1 2233 344466888865 2345677776 5589986654 455
Q ss_pred cCC
Q 008559 428 NMD 430 (561)
Q Consensus 428 ead 430 (561)
-..
T Consensus 288 ~~~ 290 (348)
T 3lst_A 288 VVP 290 (348)
T ss_dssp CBC
T ss_pred ccC
Confidence 443
No 61
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=90.27 E-value=2.9 Score=39.07 Aligned_cols=97 Identities=16% Similarity=0.176 Sum_probs=57.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc--CceEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM--NINLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l--gVpFeF~ 365 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+... ...+.|+.. +..++|.
T Consensus 55 ~~vLDiG~G~G~----~~~~l~~~--~----~~v~~vD~s~---------------------~~~~~a~~~~~~~~~~~~ 103 (242)
T 3l8d_A 55 AEVLDVGCGDGY----GTYKLSRT--G----YKAVGVDISE---------------------VMIQKGKERGEGPDLSFI 103 (242)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--T----CEEEEEESCH---------------------HHHHHHHTTTCBTTEEEE
T ss_pred CeEEEEcCCCCH----HHHHHHHc--C----CeEEEEECCH---------------------HHHHHHHhhcccCCceEE
Confidence 689999999985 55666666 2 4899998742 222333333 2334444
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
... ++++ ...++..=+|-|...|||+.+ +...+-...+.|+|..++++..
T Consensus 104 ~~d---~~~~-----~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 104 KGD---LSSL-----PFENEQFEAIMAINSLEWTEE----PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ECB---TTBC-----SSCTTCEEEEEEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ecc---hhcC-----CCCCCCccEEEEcChHhhccC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 332 2222 233444555556678888853 4444444456799987766543
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=89.74 E-value=3.2 Score=39.27 Aligned_cols=96 Identities=17% Similarity=0.253 Sum_probs=56.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc--CceEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM--NINLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l--gVpFeF~ 365 (561)
-.|+|+|.|.|. +...|+.+ | + . ++|||+.... ..+.|+.. +-.++|.
T Consensus 46 ~~vLD~GcG~G~----~~~~l~~~--~-~-~-~v~~vD~s~~---------------------~~~~a~~~~~~~~~~~~ 95 (253)
T 3g5l_A 46 KTVLDLGCGFGW----HCIYAAEH--G-A-K-KVLGIDLSER---------------------MLTEAKRKTTSPVVCYE 95 (253)
T ss_dssp CEEEEETCTTCH----HHHHHHHT--T-C-S-EEEEEESCHH---------------------HHHHHHHHCCCTTEEEE
T ss_pred CEEEEECCCCCH----HHHHHHHc--C-C-C-EEEEEECCHH---------------------HHHHHHHhhccCCeEEE
Confidence 789999999984 56666666 2 2 2 8999987432 11222221 2334444
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
... +++ +...++..=+|-|...|||+.+ ...+|+.+ +-|+|..++++.
T Consensus 96 ~~d---~~~-----~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 96 QKA---IED-----IAIEPDAYNVVLSSLALHYIAS-----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ECC---GGG-----CCCCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred Ecc---hhh-----CCCCCCCeEEEEEchhhhhhhh-----HHHHHHHHHHHcCCCcEEEEE
Confidence 332 222 2233444445555668889843 35566665 559999888774
No 63
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=89.74 E-value=0.4 Score=49.69 Aligned_cols=99 Identities=20% Similarity=0.343 Sum_probs=61.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. ++..|+.+ | .++|||+.+ ....+.|+..|++.....+
T Consensus 109 ~~VLDiGcG~G~----~~~~l~~~--g----~~v~gvD~s---------------------~~~~~~a~~~~~~~~~~~~ 157 (416)
T 4e2x_A 109 PFIVEIGCNDGI----MLRTIQEA--G----VRHLGFEPS---------------------SGVAAKAREKGIRVRTDFF 157 (416)
T ss_dssp CEEEEETCTTTT----THHHHHHT--T----CEEEEECCC---------------------HHHHHHHHTTTCCEECSCC
T ss_pred CEEEEecCCCCH----HHHHHHHc--C----CcEEEECCC---------------------HHHHHHHHHcCCCcceeee
Confidence 789999999998 66677765 2 389999874 2344566666665432111
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
..-+.+.+...++..=+|-+...|||+.+ ...+|+.+ +-|+|..+++.+.
T Consensus 158 -----~~~~~~~l~~~~~~fD~I~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 158 -----EKATADDVRRTEGPANVIYAANTLCHIPY-----VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp -----SHHHHHHHHHHHCCEEEEEEESCGGGCTT-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----chhhHhhcccCCCCEEEEEECChHHhcCC-----HHHHHHHHHHHcCCCeEEEEEe
Confidence 11111222222344445556678999863 35566665 5589998888763
No 64
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=89.08 E-value=2.5 Score=42.39 Aligned_cols=108 Identities=17% Similarity=0.089 Sum_probs=61.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc-------
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI------- 360 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV------- 360 (561)
-+|+|+|.|.|. ++..++.+. + -++|||+.+... ++.+.++..+ .++
T Consensus 50 ~~VLDlGCG~G~----~l~~~~~~~-~----~~v~GiD~S~~~-------------l~~A~~~~~~----~~~~~~~~~~ 103 (302)
T 2vdw_A 50 RKVLAIDFGNGA----DLEKYFYGE-I----ALLVATDPDADA-------------IARGNERYNK----LNSGIKTKYY 103 (302)
T ss_dssp CEEEETTCTTTT----THHHHHHTT-C----SEEEEEESCHHH-------------HHHHHHHHHH----HCC----CCC
T ss_pred CeEEEEecCCcH----hHHHHHhcC-C----CeEEEEECCHHH-------------HHHHHHHHHh----cccccccccc
Confidence 689999999995 222334332 1 479999986431 3444444332 333
Q ss_pred eEEEEEEecCCCCCCccccc--cCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 361 NLQINRLESHPLQDLSSQMV--STSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 361 pFeF~~V~~~~le~L~~~~L--~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.++|..... .-+... +.| ...++..=+|.|++.||++.+. ..+..+|+.+ |.|+|..++++
T Consensus 104 ~~~f~~~d~-~~d~~~-~~l~~~~~~~~FD~V~~~~~lhy~~~~--~~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 104 KFDYIQETI-RSDTFV-SSVREVFYFGKFNIIDWQFAIHYSFHP--RHYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp EEEEEECCT-TSSSHH-HHHHTTCCSSCEEEEEEESCGGGTCST--TTHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhhhc-ccchhh-hhhhccccCCCeeEEEECchHHHhCCH--HHHHHHHHHHHHHcCCCCEEEE
Confidence 245544332 001100 111 1223455577889999998652 2346777776 55999988775
No 65
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=88.80 E-value=4.2 Score=37.84 Aligned_cols=109 Identities=17% Similarity=0.291 Sum_probs=59.9
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
-..|++.+...+. -+|+|+|.|.|. +...|+.+ |. -++|||+....
T Consensus 32 ~~~l~~~~~~~~~-----~~vLdiG~G~G~----~~~~l~~~--~~---~~v~~vD~s~~-------------------- 77 (243)
T 3bkw_A 32 WPALRAMLPEVGG-----LRIVDLGCGFGW----FCRWAHEH--GA---SYVLGLDLSEK-------------------- 77 (243)
T ss_dssp HHHHHHHSCCCTT-----CEEEEETCTTCH----HHHHHHHT--TC---SEEEEEESCHH--------------------
T ss_pred HHHHHHhccccCC-----CEEEEEcCcCCH----HHHHHHHC--CC---CeEEEEcCCHH--------------------
Confidence 3456666654444 789999999985 45566665 21 28999987421
Q ss_pred HHHHHHHhcC--ceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 350 QLLGFAKSMN--INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 350 rL~~fA~~lg--VpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.|+... -.++|... .++++ ...++..=+|-|...|||+.+ . ..+|+.+ +.|+|..++++.
T Consensus 78 -~~~~a~~~~~~~~~~~~~~---d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 78 -MLARARAAGPDTGITYERA---DLDKL-----HLPQDSFDLAYSSLALHYVED----V-ARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp -HHHHHHHTSCSSSEEEEEC---CGGGC-----CCCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHHHHhcccCCceEEEc---Chhhc-----cCCCCCceEEEEeccccccch----H-HHHHHHHHHhcCcCcEEEEE
Confidence 222233221 12344332 22222 222333333334567888853 3 4555555 668999776653
No 66
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=88.23 E-value=5 Score=37.23 Aligned_cols=23 Identities=22% Similarity=0.091 Sum_probs=18.6
Q ss_pred cccChHHHHHHHhcCCCccccCC
Q 008559 486 MNEGKDKWCDRMRGVGFVGDVFG 508 (561)
Q Consensus 486 R~E~~~~Wr~Rm~~AGF~~vpls 508 (561)
+.-+.+.|...|..+||+.+.+.
T Consensus 164 ~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 164 RFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeEEEEe
Confidence 34567899999999999987653
No 67
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=88.06 E-value=1.3 Score=41.17 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=61.5
Q ss_pred HHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHH
Q 008559 273 ILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352 (561)
Q Consensus 273 ILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~ 352 (561)
.++.+.-.+. -+|+|+|.|.|. +...|+.+- | ..++|||+..... ++.+.++..
T Consensus 19 ~~~~l~~~~~-----~~vLDiGcG~G~----~~~~la~~~---p-~~~v~gvD~s~~~-------------l~~~~~~a~ 72 (218)
T 3mq2_A 19 EFEQLRSQYD-----DVVLDVGTGDGK----HPYKVARQN---P-SRLVVALDADKSR-------------MEKISAKAA 72 (218)
T ss_dssp HHHHHHTTSS-----EEEEEESCTTCH----HHHHHHHHC---T-TEEEEEEESCGGG-------------GHHHHHHHT
T ss_pred HHHHhhccCC-----CEEEEecCCCCH----HHHHHHHHC---C-CCEEEEEECCHHH-------------HHHHHHHHH
Confidence 3444544455 789999999984 444455542 3 4899999986431 222333333
Q ss_pred HHHHhcCc-eEEEEEEecCCCCCCccccccCCCCCEEEEEeec-cc--cccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 353 GFAKSMNI-NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQF-RL--HHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 353 ~fA~~lgV-pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f-~L--H~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
+.++..++ .++|... +++++... -.. +.+.+...+ .+ ||+.+ + ..+|+.+ |-|+|..++++..
T Consensus 73 ~~~~~~~~~~v~~~~~---d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~----~-~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 73 AKPAKGGLPNLLYLWA---TAERLPPL---SGV-GELHVLMPWGSLLRGVLGS----S-PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp SCGGGTCCTTEEEEEC---CSTTCCSC---CCE-EEEEEESCCHHHHHHHHTS----S-SHHHHHHHHTEEEEEEEEEEE
T ss_pred HhhhhcCCCceEEEec---chhhCCCC---CCC-CEEEEEccchhhhhhhhcc----H-HHHHHHHHHHcCCCcEEEEEe
Confidence 33334455 3555433 34443321 111 333333322 22 35543 2 3455554 6699998888743
No 68
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=87.91 E-value=5.7 Score=37.13 Aligned_cols=115 Identities=11% Similarity=0.076 Sum_probs=62.5
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
.+..|.+.+..... ..-.|+|+|.|.|. +...|+. + ..++|||+.... .-
T Consensus 52 ~~~~l~~~~~~~~~---~~~~vLDiGcG~G~----~~~~l~~-----~-~~~v~gvD~s~~-----------------~~ 101 (235)
T 3lcc_A 52 ATPLIVHLVDTSSL---PLGRALVPGCGGGH----DVVAMAS-----P-ERFVVGLDISES-----------------AL 101 (235)
T ss_dssp CCHHHHHHHHTTCS---CCEEEEEETCTTCH----HHHHHCB-----T-TEEEEEECSCHH-----------------HH
T ss_pred CCHHHHHHHHhcCC---CCCCEEEeCCCCCH----HHHHHHh-----C-CCeEEEEECCHH-----------------HH
Confidence 34555555543221 11589999999984 3445554 2 378999987532 22
Q ss_pred HHHHHHHHhcC--ceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHh-cCCCEEEEE
Q 008559 349 LQLLGFAKSMN--INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRS-LEPKGVILS 425 (561)
Q Consensus 349 ~rL~~fA~~lg--VpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~-L~PkvVvlv 425 (561)
+...+.+...+ -.++|... .+.++.+. +..=+|-|...|||+.. ..+..+|+.+++ |+|..++++
T Consensus 102 ~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~------~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 102 AKANETYGSSPKAEYFSFVKE---DVFTWRPT------ELFDLIFDYVFFCAIEP---EMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp HHHHHHHTTSGGGGGEEEECC---CTTTCCCS------SCEEEEEEESSTTTSCG---GGHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhhccCCCcceEEEEC---chhcCCCC------CCeeEEEEChhhhcCCH---HHHHHHHHHHHHHCCCCcEEEE
Confidence 23333333332 22444333 33333221 12223445567888863 356677777655 999988775
No 69
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=87.50 E-value=7.3 Score=36.63 Aligned_cols=99 Identities=19% Similarity=0.237 Sum_probs=55.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|.- ...|+.+ | .++|||+..... ++.+.++ ++...-.++|...
T Consensus 41 ~~vLDiG~G~G~~----~~~l~~~--~----~~v~~vD~s~~~-------------~~~a~~~----~~~~~~~~~~~~~ 93 (263)
T 2yqz_A 41 PVFLELGVGTGRI----ALPLIAR--G----YRYIALDADAAM-------------LEVFRQK----IAGVDRKVQVVQA 93 (263)
T ss_dssp CEEEEETCTTSTT----HHHHHTT--T----CEEEEEESCHHH-------------HHHHHHH----TTTSCTTEEEEES
T ss_pred CEEEEeCCcCCHH----HHHHHHC--C----CEEEEEECCHHH-------------HHHHHHH----hhccCCceEEEEc
Confidence 6899999999863 3345554 2 479999875321 1122222 1222234555433
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.++++ ...++..=+|-|.+.|||+.+ + ..+|+.+ +-|+|..++++.
T Consensus 94 ---d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 94 ---DARAI-----PLPDESVHGVIVVHLWHLVPD----W-PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ---CTTSC-----CSCTTCEEEEEEESCGGGCTT----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred ---ccccC-----CCCCCCeeEEEECCchhhcCC----H-HHHHHHHHHHCCCCcEEEEE
Confidence 23333 233343334445677888863 3 4455554 668999877765
No 70
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=87.45 E-value=2.7 Score=41.44 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=71.2
Q ss_pred HHhhccCCCCCchhHhhhHHHHHHH----hcCccCcccceEEEEccccC---CCchHHHHHHHHhCCCCCCCceEEEEec
Q 008559 253 LNFYDKSPWFAFPNNIANSSILQIL----AQDRHNQVQNLHILDIGVSH---GVQWPTLLEALTRRSGGPPPLVRLTIIA 325 (561)
Q Consensus 253 ~~f~e~sP~~kfahftANqAILEA~----~g~~~~~~~~VHIIDfgI~~---G~QWpsLiqaLA~R~gGpP~~LRITgI~ 325 (561)
..|.++.|-+. ....+|+..++.+ .... ..-+|+|+|.|. |. . .+.+..+. | ..|||+|+
T Consensus 45 ~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~----~~~~vLDlGcG~pt~G~-~---~~~~~~~~---p-~~~v~~vD 111 (274)
T 2qe6_A 45 DYACKHIPGLK-ESAIENRKVLVRGVRFLAGEA----GISQFLDLGSGLPTVQN-T---HEVAQSVN---P-DARVVYVD 111 (274)
T ss_dssp HHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTT----CCCEEEEETCCSCCSSC-H---HHHHHHHC---T-TCEEEEEE
T ss_pred HHHHHhcchhH-HHHHHHhHHHHHHHHHHhhcc----CCCEEEEECCCCCCCCh-H---HHHHHHhC---C-CCEEEEEE
Confidence 34555555443 2345556555533 2111 124899999999 83 3 23333332 3 47999998
Q ss_pred CCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEEecCCCCCCcc--------ccccCCCCCEEEEEeecccc
Q 008559 326 PTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLSS--------QMVSTSPEETLIVCTQFRLH 397 (561)
Q Consensus 326 ~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V~~~~le~L~~--------~~L~~~~~EaLaVN~~f~LH 397 (561)
.+.. -++...+++ .. .-..+|... ++.+... +.+ ..+...+|-+.+.||
T Consensus 112 ~sp~-------------~l~~Ar~~~----~~-~~~v~~~~~---D~~~~~~~~~~~~~~~~~--d~~~~d~v~~~~vlh 168 (274)
T 2qe6_A 112 IDPM-------------VLTHGRALL----AK-DPNTAVFTA---DVRDPEYILNHPDVRRMI--DFSRPAAIMLVGMLH 168 (274)
T ss_dssp SSHH-------------HHHHHHHHH----TT-CTTEEEEEC---CTTCHHHHHHSHHHHHHC--CTTSCCEEEETTTGG
T ss_pred CChH-------------HHHHHHHhc----CC-CCCeEEEEe---eCCCchhhhccchhhccC--CCCCCEEEEEechhh
Confidence 7421 122233333 11 112444333 3333210 112 223566777888899
Q ss_pred ccCCCCCchHHHHHHHHHh-cCCCEEEEEe
Q 008559 398 HLNHSTPDERTEFLRVLRS-LEPKGVILSE 426 (561)
Q Consensus 398 ~L~~es~~~r~~~L~~IR~-L~PkvVvlvE 426 (561)
|+.++ ....+|+.+++ |+|...+++.
T Consensus 169 ~~~d~---~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 169 YLSPD---VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp GSCTT---THHHHHHHHHHHSCTTCEEEEE
T ss_pred hCCcH---HHHHHHHHHHHhCCCCcEEEEE
Confidence 99864 35667777655 9998665543
No 71
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=87.29 E-value=3.7 Score=38.20 Aligned_cols=101 Identities=18% Similarity=0.148 Sum_probs=56.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+ .++|||+.... .-+...+.++..+..++|...
T Consensus 35 ~~vLdiG~G~G~----~~~~l~~~-------~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 86 (243)
T 3d2l_A 35 KRIADIGCGTGT----ATLLLADH-------YEVTGVDLSEE-----------------MLEIAQEKAMETNRHVDFWVQ 86 (243)
T ss_dssp CEEEEESCTTCH----HHHHHTTT-------SEEEEEESCHH-----------------HHHHHHHHHHHTTCCCEEEEC
T ss_pred CeEEEecCCCCH----HHHHHhhC-------CeEEEEECCHH-----------------HHHHHHHhhhhcCCceEEEEc
Confidence 579999999985 44556654 48999987532 122223333344545555443
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeec-cccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQF-RLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f-~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
. +.++. .. +..=+|-|.+ .+||+.+. .....+|+.+ +-|+|..+++++-
T Consensus 87 d---~~~~~-----~~-~~fD~v~~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 87 D---MRELE-----LP-EPVDAITILCDSLNYLQTE--ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp C---GGGCC-----CS-SCEEEEEECTTGGGGCCSH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C---hhhcC-----CC-CCcCEEEEeCCchhhcCCH--HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 2 22221 11 2222222333 68888531 3455666665 5689998888754
No 72
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=87.23 E-value=2.7 Score=38.11 Aligned_cols=107 Identities=12% Similarity=0.157 Sum_probs=59.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc-eEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI-NLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV-pFeF~~ 366 (561)
-+|+|+|.|.|.- ...++.+. .-++|+|+.... .-+...+-++..++ ..+|..
T Consensus 46 ~~vLDlgcG~G~~----~~~~~~~~-----~~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~v~~~~ 99 (189)
T 3p9n_A 46 LAVLDLYAGSGAL----GLEALSRG-----AASVLFVESDQR-----------------SAAVIARNIEALGLSGATLRR 99 (189)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT-----CSEEEEEECCHH-----------------HHHHHHHHHHHHTCSCEEEEE
T ss_pred CEEEEeCCCcCHH----HHHHHHCC-----CCeEEEEECCHH-----------------HHHHHHHHHHHcCCCceEEEE
Confidence 6799999999842 22234442 358999987532 22333344455565 344433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHh---cCCCEEEEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRS---LEPKGVILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~---L~PkvVvlvE~ead 430 (561)
- ++.++... +.-..=+.|+.|..+. +.. .....+|+.+++ |+|..+++++.+..
T Consensus 100 ~---d~~~~~~~-~~~~~fD~i~~~~p~~--~~~----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 100 G---AVAAVVAA-GTTSPVDLVLADPPYN--VDS----ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp S---CHHHHHHH-CCSSCCSEEEECCCTT--SCH----HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred c---cHHHHHhh-ccCCCccEEEECCCCC--cch----hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 2 22222110 1112224677776533 221 245667777765 99999999987765
No 73
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=87.12 E-value=1.6 Score=40.88 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=57.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.+.|.- ...|+.+- ++ ..+||+|+.... .-+...+.++..|+. ++|.
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~-~~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~~v~~~ 115 (221)
T 3u81_A 60 SLVLELGAYCGYS----AVRMARLL--QP-GARLLTMEINPD-----------------CAAITQQMLNFAGLQDKVTIL 115 (221)
T ss_dssp SEEEEECCTTSHH----HHHHHTTS--CT-TCEEEEEESCHH-----------------HHHHHHHHHHHHTCGGGEEEE
T ss_pred CEEEEECCCCCHH----HHHHHHhC--CC-CCEEEEEeCChH-----------------HHHHHHHHHHHcCCCCceEEE
Confidence 6899999999853 23344431 22 479999987532 233444455556664 5554
Q ss_pred EEecC-CCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEeccCC
Q 008559 366 RLESH-PLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~-~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ead 430 (561)
.-... .+..+.. ......=+.|+++.. .|+.. +...+|..++-|+|..+++++.-..
T Consensus 116 ~~d~~~~l~~~~~-~~~~~~fD~V~~d~~--~~~~~-----~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 116 NGASQDLIPQLKK-KYDVDTLDMVFLDHW--KDRYL-----PDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp ESCHHHHGGGTTT-TSCCCCCSEEEECSC--GGGHH-----HHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred ECCHHHHHHHHHH-hcCCCceEEEEEcCC--cccch-----HHHHHHHhccccCCCeEEEEeCCCC
Confidence 32210 0111110 000122245655532 22221 2335666668899999998865443
No 74
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=87.11 E-value=3.8 Score=39.40 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=58.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|.-- ..|+.+. ..++|||+.... .-....+.+...++.-.++.+
T Consensus 66 ~~vLDiGcG~G~~~----~~l~~~~-----~~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~v~~~ 119 (298)
T 1ri5_A 66 DSVLDLGCGKGGDL----LKYERAG-----IGEYYGVDIAEV-----------------SINDARVRARNMKRRFKVFFR 119 (298)
T ss_dssp CEEEEETCTTTTTH----HHHHHHT-----CSEEEEEESCHH-----------------HHHHHHHHHHTSCCSSEEEEE
T ss_pred CeEEEECCCCCHHH----HHHHHCC-----CCEEEEEECCHH-----------------HHHHHHHHHHhcCCCccEEEE
Confidence 68999999999632 2355442 358999987532 223333444455653333334
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.. .+.++.. . .++..=+|-|.+.|||+.. .......+|+.+ +-|+|...+++..
T Consensus 120 ~~-d~~~~~~---~-~~~~fD~v~~~~~l~~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 120 AQ-DSYGRHM---D-LGKEFDVISSQFSFHYAFS-TSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp ES-CTTTSCC---C-CSSCEEEEEEESCGGGGGS-SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EC-Ccccccc---C-CCCCcCEEEECchhhhhcC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 33 3333311 0 2333333445566788532 123345666665 5689998777643
No 75
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=87.05 E-value=4.3 Score=41.84 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=67.2
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
+.+..+++..... ....-.|+|+|.|.| .|...|+.+ | .-+++||+.+ .. + +
T Consensus 48 ~~~~~~~i~~~~~-~~~~~~VLDlGcGtG----~ls~~la~~--g---~~~V~gvD~s-~~-------------~----~ 99 (376)
T 3r0q_C 48 MDAYFNAVFQNKH-HFEGKTVLDVGTGSG----ILAIWSAQA--G---ARKVYAVEAT-KM-------------A----D 99 (376)
T ss_dssp HHHHHHHHHTTTT-TTTTCEEEEESCTTT----HHHHHHHHT--T---CSEEEEEESS-TT-------------H----H
T ss_pred HHHHHHHHHhccc-cCCCCEEEEeccCcC----HHHHHHHhc--C---CCEEEEEccH-HH-------------H----H
Confidence 4444555533222 223378999999999 345556665 3 1489999976 31 2 3
Q ss_pred HHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 350 QLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 350 rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
...+.++..|++=.+..+.. +++++... ..=++|+.+ +-+|.+..+ ..+..+|+.+ +-|+|..+++...
T Consensus 100 ~a~~~~~~~~~~~~v~~~~~-d~~~~~~~----~~~D~Iv~~--~~~~~l~~e--~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 100 HARALVKANNLDHIVEVIEG-SVEDISLP----EKVDVIISE--WMGYFLLRE--SMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp HHHHHHHHTTCTTTEEEEES-CGGGCCCS----SCEEEEEEC--CCBTTBTTT--CTHHHHHHHHHHHEEEEEEEESSE
T ss_pred HHHHHHHHcCCCCeEEEEEC-chhhcCcC----CcceEEEEc--Chhhcccch--HHHHHHHHHHHhhCCCCeEEEEec
Confidence 44455566666522333333 34443321 111344433 334444433 3567888887 7799998887543
No 76
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=86.62 E-value=1.1 Score=43.47 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=62.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
=+|+|+|.|.| +|--.++.+. | ..++++++-+. ..-+-..+.|+..|+...|...
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~~---p-~a~~~A~Di~~-----------------~~leiar~~~~~~g~~~~v~~~ 105 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNEN---E-KIIYHAYDIDR-----------------AEIAFLSSIIGKLKTTIKYRFL 105 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCSS---C-CCEEEEECSCH-----------------HHHHHHHHHHHHSCCSSEEEEE
T ss_pred CeEEEecCCCC----HHHHHHHhcC---C-CCEEEEEeCCH-----------------HHHHHHHHHHHhcCCCccEEEe
Confidence 57999999876 4444444432 4 56999998753 2345555667788887554442
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
.. . + ...++..=+|-..--||+| ++ .+...++.++.|+|..|+++=.
T Consensus 106 d~------~-~--~~~~~~~DvVLa~k~LHlL-~~---~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 106 NK------E-S--DVYKGTYDVVFLLKMLPVL-KQ---QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp CC------H-H--HHTTSEEEEEEEETCHHHH-HH---TTCCHHHHHHTCEEEEEEEEEE
T ss_pred cc------c-c--cCCCCCcChhhHhhHHHhh-hh---hHHHHHHHHHHhCCCCEEEEeC
Confidence 21 0 1 1223333344444568888 42 3455678899999999998744
No 77
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=86.55 E-value=4.3 Score=40.05 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=59.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHh----cCceEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKS----MNINLQ 363 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~----lgVpFe 363 (561)
.+|+|+|.|.|.- ...|+.++ ..++|+|+..... ++...+++...... ....++
T Consensus 36 ~~VLDlGcG~G~~----~~~l~~~~-----~~~v~gvD~s~~~-------------l~~a~~~~~~~~~~~~~~~~~~~~ 93 (313)
T 3bgv_A 36 ITVLDLGCGKGGD----LLKWKKGR-----INKLVCTDIADVS-------------VKQCQQRYEDMKNRRDSEYIFSAE 93 (313)
T ss_dssp CEEEEETCTTTTT----HHHHHHTT-----CSEEEEEESCHHH-------------HHHHHHHHHHHHSSSCC-CCCEEE
T ss_pred CEEEEECCCCcHH----HHHHHhcC-----CCEEEEEeCCHHH-------------HHHHHHHHHHhhhcccccccceEE
Confidence 7899999999873 34445432 3589999875321 33344443322110 112344
Q ss_pred EEEEecCCCCCCcc-ccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 364 INRLESHPLQDLSS-QMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 364 F~~V~~~~le~L~~-~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
|... +++++.. +.+.-.++..=+|-|.+.||++... ......+|+.+ +.|+|..++++.
T Consensus 94 ~~~~---D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 94 FITA---DSSKELLIDKFRDPQMCFDICSCQFVCHYSFES-YEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp EEEC---CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS-HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEe---cccccchhhhcccCCCCEEEEEEecchhhccCC-HHHHHHHHHHHHHHhCCCcEEEEe
Confidence 4333 3333321 0121122334345556789988321 12345677766 559999887754
No 78
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=86.49 E-value=3.5 Score=38.88 Aligned_cols=125 Identities=22% Similarity=0.311 Sum_probs=64.1
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
....+++.+...-......-.|+|+|.|.|. +...|+.+- ..++|+|+.... .-
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~-----~~~v~~vD~s~~-----------------~~ 115 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGR----ITKRLLLPL-----FREVDMVDITED-----------------FL 115 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTH----HHHHTTTTT-----CSEEEEEESCHH-----------------HH
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCH----HHHHHHHhc-----CCEEEEEeCCHH-----------------HH
Confidence 3445555554321101123789999999985 445555542 258999987532 12
Q ss_pred HHHHHHHHhc-CceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE-
Q 008559 349 LQLLGFAKSM-NINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS- 425 (561)
Q Consensus 349 ~rL~~fA~~l-gVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv- 425 (561)
+...+.+... +...+|... .++++. ..++..=+|-|...|||+.+ ..+..+|+.+ +.|+|..++++
T Consensus 116 ~~a~~~~~~~~~~~~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 116 VQAKTYLGEEGKRVRNYFCC---GLQDFT-----PEPDSYDVIWIQWVIGHLTD---QHLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp HHHHHHTGGGGGGEEEEEEC---CGGGCC-----CCSSCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhhhcCCceEEEEEc---ChhhcC-----CCCCCEEEEEEcchhhhCCH---HHHHHHHHHHHHhcCCCeEEEEE
Confidence 2222333333 223444433 232222 22333333334567888864 2345667665 55999977665
Q ss_pred eccCC
Q 008559 426 ENNMD 430 (561)
Q Consensus 426 E~ead 430 (561)
+....
T Consensus 185 ~~~~~ 189 (241)
T 2ex4_A 185 DNMAQ 189 (241)
T ss_dssp EEEBS
T ss_pred EccCC
Confidence 54333
No 79
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=86.45 E-value=4.6 Score=35.57 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred HHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHH
Q 008559 273 ILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLL 352 (561)
Q Consensus 273 ILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~ 352 (561)
+++.+.-.+. -.|+|+|.|.|. +...|+.+- . ++|||+.... ..
T Consensus 9 ~~~~~~~~~~-----~~vLDiG~G~G~----~~~~l~~~~-----~-~v~~vD~s~~---------------------~~ 52 (170)
T 3i9f_A 9 YLPNIFEGKK-----GVIVDYGCGNGF----YCKYLLEFA-----T-KLYCIDINVI---------------------AL 52 (170)
T ss_dssp THHHHHSSCC-----EEEEEETCTTCT----THHHHHTTE-----E-EEEEECSCHH---------------------HH
T ss_pred HHHhcCcCCC-----CeEEEECCCCCH----HHHHHHhhc-----C-eEEEEeCCHH---------------------HH
Confidence 4555544444 789999999986 455666552 3 8999987432 12
Q ss_pred HHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEe
Q 008559 353 GFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSE 426 (561)
Q Consensus 353 ~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE 426 (561)
+.|+...-..+|. .. . +...++..=+|-|...|||+.+ + ..+|+. .+.|+|..++++.
T Consensus 53 ~~a~~~~~~v~~~--~~-d--------~~~~~~~~D~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 53 KEVKEKFDSVITL--SD-P--------KEIPDNSVDFILFANSFHDMDD----K-QHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp HHHHHHCTTSEEE--SS-G--------GGSCTTCEEEEEEESCSTTCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCcEEE--eC-C--------CCCCCCceEEEEEccchhcccC----H-HHHHHHHHHhcCCCCEEEEE
Confidence 2222221122221 11 1 3333444444556677888853 3 455555 4669998776653
No 80
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=86.45 E-value=2.9 Score=39.89 Aligned_cols=97 Identities=22% Similarity=0.296 Sum_probs=56.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+ | .++|||+.... ..+.|+...-.++|...
T Consensus 52 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~s~~---------------------~~~~a~~~~~~~~~~~~ 100 (263)
T 3pfg_A 52 ASLLDVACGTGM----HLRHLADS--F----GTVEGLELSAD---------------------MLAIARRRNPDAVLHHG 100 (263)
T ss_dssp CEEEEETCTTSH----HHHHHTTT--S----SEEEEEESCHH---------------------HHHHHHHHCTTSEEEEC
T ss_pred CcEEEeCCcCCH----HHHHHHHc--C----CeEEEEECCHH---------------------HHHHHHhhCCCCEEEEC
Confidence 689999999984 56667765 3 37999987421 12222222112333322
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeec-cccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQF-RLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f-~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.++++. . ++..=+|-|.+ .|||+.+ +.....+|+.+ +.|+|..+++++
T Consensus 101 ---d~~~~~-----~-~~~fD~v~~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 101 ---DMRDFS-----L-GRRFSAVTCMFSSIGHLAG--QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ---CTTTCC-----C-SCCEEEEEECTTGGGGSCH--HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---ChHHCC-----c-cCCcCEEEEcCchhhhcCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 333322 2 33344455566 8889864 13455667666 558999999886
No 81
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=86.26 E-value=3.7 Score=37.33 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=56.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|.-...++ +. + ..++|||+.... .-+...+.++..+..++|...
T Consensus 25 ~~vLDiGcG~G~~~~~~~---~~-~-----~~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~ 78 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIF---VE-D-----GYKTYGIEISDL-----------------QLKKAENFSRENNFKLNISKG 78 (209)
T ss_dssp SEEEEESCCSSSCTHHHH---HH-T-----TCEEEEEECCHH-----------------HHHHHHHHHHHHTCCCCEEEC
T ss_pred CEEEEECCCCCHHHHHHH---Hh-C-----CCEEEEEECCHH-----------------HHHHHHHHHHhcCCceEEEEC
Confidence 689999999886544333 32 2 258999987532 222233333333444444333
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
.++++ ...++..=+|-|...|||+.. .....+|+.+ +.|+|..++++..
T Consensus 79 ---d~~~~-----~~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 79 ---DIRKL-----PFKDESMSFVYSYGTIFHMRK---NDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp ---CTTSC-----CSCTTCEEEEEECSCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---chhhC-----CCCCCceeEEEEcChHHhCCH---HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 23332 233333333334467888842 3455666665 6699998777643
No 82
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=86.18 E-value=0.98 Score=45.17 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=66.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. | +++.+ | ..+++++|-.. .+...+.+++..+|+++.|...
T Consensus 107 ~~VLDlGCG~gp----L--al~~~----~-~~~y~a~DId~-----------------~~i~~ar~~~~~~g~~~~~~v~ 158 (253)
T 3frh_A 107 RRVLDIACGLNP----L--ALYER----G-IASVWGCDIHQ-----------------GLGDVITPFAREKDWDFTFALQ 158 (253)
T ss_dssp SEEEEETCTTTH----H--HHHHT----T-CSEEEEEESBH-----------------HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEecCCccH----H--HHHhc----c-CCeEEEEeCCH-----------------HHHHHHHHHHHhcCCCceEEEe
Confidence 589999998872 1 22222 3 58999998753 4567788888888999998877
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
.. . ...+ -.+.+++.++ ..+|+|-++ .+...++.+..|+|..||+.=.
T Consensus 159 D~-~-----~~~~-~~~~DvvLll--k~lh~LE~q---~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 159 DV-L-----CAPP-AEAGDLALIF--KLLPLLERE---QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CT-T-----TSCC-CCBCSEEEEE--SCHHHHHHH---STTHHHHHHHHCBCSEEEEEEE
T ss_pred ec-c-----cCCC-CCCcchHHHH--HHHHHhhhh---chhhHHHHHHHhcCCCEEEEcC
Confidence 54 1 1111 1234555555 457777553 3345668889999998888644
No 83
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=85.99 E-value=4.4 Score=41.18 Aligned_cols=114 Identities=17% Similarity=0.189 Sum_probs=62.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
++|++.+.-.+. -+|+|+|.|.|. |...++.+. ..++|||+.+. . + ..
T Consensus 40 ~~i~~~l~~~~~-----~~VLDiGcGtG~----ls~~la~~g-----~~~V~~vD~s~-~-------------~----~~ 87 (348)
T 2y1w_A 40 RAILQNHTDFKD-----KIVLDVGCGSGI----LSFFAAQAG-----ARKIYAVEAST-M-------------A----QH 87 (348)
T ss_dssp HHHHHTGGGTTT-----CEEEEETCTTSH----HHHHHHHTT-----CSEEEEEECST-H-------------H----HH
T ss_pred HHHHhccccCCc-----CEEEEcCCCccH----HHHHHHhCC-----CCEEEEECCHH-H-------------H----HH
Confidence 456666654444 799999999885 555666652 35899998742 1 1 23
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEE
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS 425 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlv 425 (561)
..+.++..|+.=.+..+.. +++++... ..=+.|+.+ .-++|+..+ .....+....+-|+|..+++.
T Consensus 88 a~~~~~~~~l~~~v~~~~~-d~~~~~~~----~~~D~Ivs~--~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 88 AEVLVKSNNLTDRIVVIPG-KVEEVSLP----EQVDIIISE--PMGYMLFNE--RMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp HHHHHHHTTCTTTEEEEES-CTTTCCCS----SCEEEEEEC--CCBTTBTTT--SHHHHHHHGGGGEEEEEEEES
T ss_pred HHHHHHHcCCCCcEEEEEc-chhhCCCC----CceeEEEEe--CchhcCChH--HHHHHHHHHHhhcCCCeEEEE
Confidence 3334444455322233333 44444211 111233333 235666543 334555555677999988874
No 84
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=85.38 E-value=5.1 Score=40.79 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=59.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-.|+|+|.|.|. +...|+.+ | ..+++||+.+ + .-....+.++..|++ .+|.
T Consensus 68 ~~VLDvGcG~G~----~~~~la~~--g---~~~v~gvD~s-~-----------------~l~~a~~~~~~~~~~~~v~~~ 120 (349)
T 3q7e_A 68 KVVLDVGSGTGI----LCMFAAKA--G---ARKVIGIECS-S-----------------ISDYAVKIVKANKLDHVVTII 120 (349)
T ss_dssp CEEEEESCTTSH----HHHHHHHT--T---CSEEEEEECS-T-----------------HHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEEeccchH----HHHHHHHC--C---CCEEEEECcH-H-----------------HHHHHHHHHHHcCCCCcEEEE
Confidence 679999999994 55666766 2 3699999875 2 123344455566665 4444
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
. . +++++... ...=++|+.+.+ .|.+..+ .....+|+.+ |-|+|..+++.+
T Consensus 121 ~--~-d~~~~~~~---~~~fD~Iis~~~--~~~l~~~--~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 121 K--G-KVEEVELP---VEKVDIIISEWM--GYCLFYE--SMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp E--S-CTTTCCCS---SSCEEEEEECCC--BBTBTBT--CCHHHHHHHHHHHEEEEEEEESC
T ss_pred E--C-cHHHccCC---CCceEEEEEccc--cccccCc--hhHHHHHHHHHHhCCCCCEEccc
Confidence 3 3 44444211 111134444432 2333332 3467788887 779999988743
No 85
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=84.70 E-value=7.2 Score=38.18 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=54.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
=.|+|+|.|.|. +...|+.+ | -++|||+.+. ...+.|+.. -.++|..
T Consensus 41 ~~vLDvGcGtG~----~~~~l~~~--~----~~v~gvD~s~---------------------~ml~~a~~~-~~v~~~~- 87 (257)
T 4hg2_A 41 GDALDCGCGSGQ----ASLGLAEF--F----ERVHAVDPGE---------------------AQIRQALRH-PRVTYAV- 87 (257)
T ss_dssp SEEEEESCTTTT----THHHHHTT--C----SEEEEEESCH---------------------HHHHTCCCC-TTEEEEE-
T ss_pred CCEEEEcCCCCH----HHHHHHHh--C----CEEEEEeCcH---------------------Hhhhhhhhc-CCceeeh-
Confidence 358999999995 34556655 2 3789998742 122334432 1233332
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
. +.++ +.+.++.+=+|-|...||++. .+.+|+.+ |-|+|..++++-
T Consensus 88 -~-~~e~-----~~~~~~sfD~v~~~~~~h~~~------~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 88 -A-PAED-----TGLPPASVDVAIAAQAMHWFD------LDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -C-CTTC-----CCCCSSCEEEEEECSCCTTCC------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -h-hhhh-----hcccCCcccEEEEeeehhHhh------HHHHHHHHHHHcCCCCEEEEE
Confidence 2 3333 344555555566667788863 23456555 559999876553
No 86
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=84.59 E-value=1.7 Score=40.96 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=53.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+... ...+.|+.. ++|.
T Consensus 43 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~s~---------------------~~~~~a~~~---~~~~-- 86 (240)
T 3dli_A 43 RRVLDIGCGRGE----FLELCKEE--G----IESIGVDINE---------------------DMIKFCEGK---FNVV-- 86 (240)
T ss_dssp SCEEEETCTTTH----HHHHHHHH--T----CCEEEECSCH---------------------HHHHHHHTT---SEEE--
T ss_pred CeEEEEeCCCCH----HHHHHHhC--C----CcEEEEECCH---------------------HHHHHHHhh---ccee--
Confidence 689999999885 44566665 2 3579998742 233444444 2222
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. ..+++. ....++..=+|-|...|||+.+ .....+|+.+ +.|+|..++++.
T Consensus 87 ~~-d~~~~~---~~~~~~~fD~i~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 87 KS-DAIEYL---KSLPDKYLDGVMISHFVEHLDP---ERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp CS-CHHHHH---HTSCTTCBSEEEEESCGGGSCG---GGHHHHHHHHHHHBCTTCCEEEE
T ss_pred ec-cHHHHh---hhcCCCCeeEEEECCchhhCCc---HHHHHHHHHHHHHcCCCcEEEEE
Confidence 21 111110 0222332223445577889864 2456667665 569998666653
No 87
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=83.78 E-value=2.4 Score=41.13 Aligned_cols=123 Identities=18% Similarity=0.163 Sum_probs=65.4
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+..... .+|+|+|.|.|. +...|+.+ | .++|||+.+... ++.+.++
T Consensus 47 ~~l~~~l~~~~~-----~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~s~~~-------------l~~a~~~ 98 (293)
T 3thr_A 47 AWLLGLLRQHGC-----HRVLDVACGTGV----DSIMLVEE--G----FSVTSVDASDKM-------------LKYALKE 98 (293)
T ss_dssp HHHHHHHHHTTC-----CEEEETTCTTSH----HHHHHHHT--T----CEEEEEESCHHH-------------HHHHHHH
T ss_pred HHHHHHhcccCC-----CEEEEecCCCCH----HHHHHHHC--C----CeEEEEECCHHH-------------HHHHHHh
Confidence 455666655555 789999999985 44556665 3 289999875321 2233333
Q ss_pred HHHHHHhcC-ceEEEEEEecCCCCCCccccccCCCCCEEEEEee-ccccccCCC--CCchHHHHHHHH-HhcCCCEEEEE
Q 008559 351 LLGFAKSMN-INLQINRLESHPLQDLSSQMVSTSPEETLIVCTQ-FRLHHLNHS--TPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 351 L~~fA~~lg-VpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~-f~LH~L~~e--s~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
+.+.....+ ..++|... .+.++.. ++ ..++..=+|-|. ..|||+.+. .......+|+.+ +.|+|..++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~---d~~~~~~-~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 99 RWNRRKEPAFDKWVIEEA---NWLTLDK-DV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp HHHTTTSHHHHTCEEEEC---CGGGHHH-HS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhcccccccceeeEeec---ChhhCcc-cc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 221111111 12333322 2222211 11 233444445555 688998751 113456677666 55999977775
Q ss_pred e
Q 008559 426 E 426 (561)
Q Consensus 426 E 426 (561)
.
T Consensus 174 ~ 174 (293)
T 3thr_A 174 D 174 (293)
T ss_dssp E
T ss_pred E
Confidence 4
No 88
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=83.71 E-value=2.6 Score=42.72 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=75.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. | ++.-.. ..| ..++++++-.. ..-..+.+++..+|+++.|...
T Consensus 134 ~~VLDLGCG~Gp----L--Al~~~~-~~p-~a~y~a~DId~-----------------~~le~a~~~l~~~g~~~~~~v~ 188 (281)
T 3lcv_B 134 NTLRDLACGLNP----L--AAPWMG-LPA-ETVYIASDIDA-----------------RLVGFVDEALTRLNVPHRTNVA 188 (281)
T ss_dssp SEEEETTCTTGG----G--CCTTTT-CCT-TCEEEEEESBH-----------------HHHHHHHHHHHHTTCCEEEEEC
T ss_pred ceeeeeccCccH----H--HHHHHh-hCC-CCEEEEEeCCH-----------------HHHHHHHHHHHhcCCCceEEEe
Confidence 578999999873 1 111222 124 59999998753 3556777788888999888655
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEecc--CCCCCCCCCChhhHHHH
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENN--MDCSCGNCGDFATGFAR 445 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~e--ad~~~~n~~~F~~RF~e 445 (561)
.. ... ....+.+++.++ ..+|+|-++ .+...++.+..|+|..|++.=.- .. .-++.|
T Consensus 189 D~------~~~-~p~~~~DvaL~l--kti~~Le~q---~kg~g~~ll~aL~~~~vvVSfp~ksl~---Grs~gm------ 247 (281)
T 3lcv_B 189 DL------LED-RLDEPADVTLLL--KTLPCLETQ---QRGSGWEVIDIVNSPNIVVTFPTKSLG---QRSKGM------ 247 (281)
T ss_dssp CT------TTS-CCCSCCSEEEET--TCHHHHHHH---STTHHHHHHHHSSCSEEEEEEECC----------CH------
T ss_pred ee------ccc-CCCCCcchHHHH--HHHHHhhhh---hhHHHHHHHHHhCCCCEEEeccchhhc---CCCcch------
Confidence 43 111 112334555555 457777553 33456699999999999886333 22 223333
Q ss_pred HHHHHHHHHhhhh
Q 008559 446 RVEYLWRFLDSTS 458 (561)
Q Consensus 446 aL~yY~alfDSLd 458 (561)
...|...|+..-
T Consensus 248 -~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 248 -FQNYSQSFESQA 259 (281)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHH
Confidence 346788888865
No 89
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=83.71 E-value=13 Score=32.61 Aligned_cols=111 Identities=15% Similarity=0.233 Sum_probs=59.2
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..+++.+.-.+. -+|+|+|.|.| .+...|+.+- | ..++|+|+.... .-+.
T Consensus 15 ~~~~~~~~~~~~-----~~vldiG~G~G----~~~~~l~~~~---~-~~~v~~vD~~~~-----------------~~~~ 64 (178)
T 3hm2_A 15 ALAISALAPKPH-----ETLWDIGGGSG----SIAIEWLRST---P-QTTAVCFEISEE-----------------RRER 64 (178)
T ss_dssp HHHHHHHCCCTT-----EEEEEESTTTT----HHHHHHHTTS---S-SEEEEEECSCHH-----------------HHHH
T ss_pred HHHHHHhcccCC-----CeEEEeCCCCC----HHHHHHHHHC---C-CCeEEEEeCCHH-----------------HHHH
Confidence 345555554444 78999999988 4555666653 3 489999987532 2333
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.++..|++-.+ .+.....+.+.. . ...=++|+++ +.+|+ ..+|+.+ +.|+|...+++.
T Consensus 65 a~~~~~~~~~~~~~-~~~~d~~~~~~~--~-~~~~D~i~~~--~~~~~---------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 65 ILSNAINLGVSDRI-AVQQGAPRAFDD--V-PDNPDVIFIG--GGLTA---------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp HHHHHHTTTCTTSE-EEECCTTGGGGG--C-CSCCSEEEEC--C-TTC---------TTHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHHHhCCCCCE-EEecchHhhhhc--c-CCCCCEEEEC--CcccH---------HHHHHHHHHhcCCCCEEEEE
Confidence 44445566765223 333311122211 0 0222455544 33444 2345554 568998777653
No 90
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=83.63 E-value=6.4 Score=36.47 Aligned_cols=31 Identities=10% Similarity=-0.001 Sum_probs=23.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+.+.
T Consensus 24 ~~vLD~GCG~G~----~~~~la~~--g----~~V~gvD~S~ 54 (203)
T 1pjz_A 24 ARVLVPLCGKSQ----DMSWLSGQ--G----YHVVGAELSE 54 (203)
T ss_dssp CEEEETTTCCSH----HHHHHHHH--C----CEEEEEEECH
T ss_pred CEEEEeCCCCcH----hHHHHHHC--C----CeEEEEeCCH
Confidence 689999999984 34456665 3 4899998753
No 91
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=83.24 E-value=5.8 Score=38.78 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=57.0
Q ss_pred EEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcC----ceEEE
Q 008559 289 HILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMN----INLQI 364 (561)
Q Consensus 289 HIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lg----VpFeF 364 (561)
.|+|+|.|.|. +...|+.+ | .++|||+.... .-+...+.+...+ ..++|
T Consensus 85 ~vLDlGcG~G~----~~~~l~~~--~----~~v~gvD~s~~-----------------~~~~a~~~~~~~~~~~~~~v~~ 137 (299)
T 3g2m_A 85 PVLELAAGMGR----LTFPFLDL--G----WEVTALELSTS-----------------VLAAFRKRLAEAPADVRDRCTL 137 (299)
T ss_dssp CEEEETCTTTT----THHHHHTT--T----CCEEEEESCHH-----------------HHHHHHHHHHTSCHHHHTTEEE
T ss_pred cEEEEeccCCH----HHHHHHHc--C----CeEEEEECCHH-----------------HHHHHHHHHhhcccccccceEE
Confidence 79999999997 45556665 2 47899987532 2233333344444 33555
Q ss_pred EEEecCCCCCCccccccCCCCCE-EEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 365 NRLESHPLQDLSSQMVSTSPEET-LIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 365 ~~V~~~~le~L~~~~L~~~~~Ea-LaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
..-. ++++. . ++.. +||++...+|++.. ..+..+|+.+ +.|+|..+++++.
T Consensus 138 ~~~d---~~~~~-----~-~~~fD~v~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 138 VQGD---MSAFA-----L-DKRFGTVVISSGSINELDE---ADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EECB---TTBCC-----C-SCCEEEEEECHHHHTTSCH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCc---hhcCC-----c-CCCcCEEEECCcccccCCH---HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4433 33322 2 2322 34444445666532 3466777776 5589998777654
No 92
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.01 E-value=6.2 Score=40.91 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=67.7
Q ss_pred HhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHH
Q 008559 267 NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDN 346 (561)
Q Consensus 267 ftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~e 346 (561)
-.....+++.+..... -+|+|+|.|.|. +...|+.+- | ..++|+|+....
T Consensus 208 d~~~~~ll~~l~~~~~-----~~VLDlGcG~G~----~s~~la~~~---p-~~~V~gvD~s~~----------------- 257 (375)
T 4dcm_A 208 DIGARFFMQHLPENLE-----GEIVDLGCGNGV----IGLTLLDKN---P-QAKVVFVDESPM----------------- 257 (375)
T ss_dssp CHHHHHHHHTCCCSCC-----SEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEESCHH-----------------
T ss_pred cHHHHHHHHhCcccCC-----CeEEEEeCcchH----HHHHHHHHC---C-CCEEEEEECcHH-----------------
Confidence 3344567887766555 789999999994 455556552 3 479999987532
Q ss_pred HHHHHHHHHHhcCc----eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCE
Q 008559 347 YSLQLLGFAKSMNI----NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKG 421 (561)
Q Consensus 347 tg~rL~~fA~~lgV----pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~Pkv 421 (561)
.-+...+-++..|+ .++|..-.. .+.+ .-..=+.|+.|-.| |+...........+|+.++ .|+|..
T Consensus 258 al~~Ar~n~~~ngl~~~~~v~~~~~D~--~~~~-----~~~~fD~Ii~nppf--h~~~~~~~~~~~~~l~~~~~~LkpgG 328 (375)
T 4dcm_A 258 AVASSRLNVETNMPEALDRCEFMINNA--LSGV-----EPFRFNAVLCNPPF--HQQHALTDNVAWEMFHHARRCLKING 328 (375)
T ss_dssp HHHHHHHHHHHHCGGGGGGEEEEECST--TTTC-----CTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHcCCCcCceEEEEechh--hccC-----CCCCeeEEEECCCc--ccCcccCHHHHHHHHHHHHHhCCCCc
Confidence 22333333444454 355554432 1111 11122466667655 4322211233446776664 599998
Q ss_pred EEEEeccC
Q 008559 422 VILSENNM 429 (561)
Q Consensus 422 VvlvE~ea 429 (561)
++++..+.
T Consensus 329 ~l~iv~n~ 336 (375)
T 4dcm_A 329 ELYIVANR 336 (375)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 88875433
No 93
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=82.86 E-value=12 Score=32.95 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=64.2
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
..+.|++.+.-.+. -+|+|+|.|.|. +...|+.+ + .++++|+.... .-
T Consensus 40 ~~~~l~~~~~~~~~-----~~vLdiG~G~G~----~~~~~~~~--~----~~v~~~D~~~~-----------------~~ 87 (194)
T 1dus_A 40 GTKILVENVVVDKD-----DDILDLGCGYGV----IGIALADE--V----KSTTMADINRR-----------------AI 87 (194)
T ss_dssp HHHHHHHHCCCCTT-----CEEEEETCTTSH----HHHHHGGG--S----SEEEEEESCHH-----------------HH
T ss_pred HHHHHHHHcccCCC-----CeEEEeCCCCCH----HHHHHHHc--C----CeEEEEECCHH-----------------HH
Confidence 44567777754444 789999999983 45566665 1 48999987432 22
Q ss_pred HHHHHHHHhcCce---EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE
Q 008559 349 LQLLGFAKSMNIN---LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL 424 (561)
Q Consensus 349 ~rL~~fA~~lgVp---FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl 424 (561)
....+.++..+++ ++|.... +.+. +.-..=+.|+.|.. +|+- ......+|+.+ +.|+|..+++
T Consensus 88 ~~a~~~~~~~~~~~~~~~~~~~d---~~~~----~~~~~~D~v~~~~~--~~~~----~~~~~~~l~~~~~~L~~gG~l~ 154 (194)
T 1dus_A 88 KLAKENIKLNNLDNYDIRVVHSD---LYEN----VKDRKYNKIITNPP--IRAG----KEVLHRIIEEGKELLKDNGEIW 154 (194)
T ss_dssp HHHHHHHHHTTCTTSCEEEEECS---TTTT----CTTSCEEEEEECCC--STTC----HHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHcCCCccceEEEECc---hhcc----cccCCceEEEECCC--cccc----hhHHHHHHHHHHHHcCCCCEEE
Confidence 3334444555665 5554432 2221 11111134554433 3331 12345666665 5689998777
Q ss_pred EeccC
Q 008559 425 SENNM 429 (561)
Q Consensus 425 vE~ea 429 (561)
+....
T Consensus 155 ~~~~~ 159 (194)
T 1dus_A 155 VVIQT 159 (194)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 65443
No 94
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=82.47 E-value=13 Score=33.78 Aligned_cols=106 Identities=22% Similarity=0.268 Sum_probs=59.8
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+. .+. -+|+|+|.|.| .+...|+.+ | .++|+|+... .
T Consensus 23 ~~l~~~~~-~~~-----~~vLdiG~G~G----~~~~~l~~~--~----~~~~~~D~~~---------------------~ 65 (230)
T 3cc8_A 23 PNLLKHIK-KEW-----KEVLDIGCSSG----ALGAAIKEN--G----TRVSGIEAFP---------------------E 65 (230)
T ss_dssp HHHHTTCC-TTC-----SEEEEETCTTS----HHHHHHHTT--T----CEEEEEESSH---------------------H
T ss_pred HHHHHHhc-cCC-----CcEEEeCCCCC----HHHHHHHhc--C----CeEEEEeCCH---------------------H
Confidence 44555554 334 78999999998 455667776 2 5899998642 2
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.|+.... +| +.. +++++. +...++..=+|-|...|||+.+ + ..+|+.+ +-|+|..++++.
T Consensus 66 ~~~~~~~~~~--~~--~~~-d~~~~~---~~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 66 AAEQAKEKLD--HV--VLG-DIETMD---MPYEEEQFDCVIFGDVLEHLFD----P-WAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp HHHHHHTTSS--EE--EES-CTTTCC---CCSCTTCEEEEEEESCGGGSSC----H-HHHHHHTGGGEEEEEEEEEE
T ss_pred HHHHHHHhCC--cE--EEc-chhhcC---CCCCCCccCEEEECChhhhcCC----H-HHHHHHHHHHcCCCCEEEEE
Confidence 3344444333 22 222 333221 2233333333335567888863 3 4666666 558998766653
No 95
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=82.39 E-value=11 Score=38.02 Aligned_cols=115 Identities=16% Similarity=0.111 Sum_probs=60.5
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
.+|++.+.-.+. -+|+|+|.|.|. |...++.+ | .-+++||+.+ . .-..
T Consensus 28 ~ai~~~~~~~~~-----~~VLDiGcGtG~----ls~~la~~--g---~~~v~~vD~s-~-----------------~~~~ 75 (328)
T 1g6q_1 28 NAIIQNKDLFKD-----KIVLDVGCGTGI----LSMFAAKH--G---AKHVIGVDMS-S-----------------IIEM 75 (328)
T ss_dssp HHHHHHHHHHTT-----CEEEEETCTTSH----HHHHHHHT--C---CSEEEEEESS-T-----------------HHHH
T ss_pred HHHHhhHhhcCC-----CEEEEecCccHH----HHHHHHHC--C---CCEEEEEChH-H-----------------HHHH
Confidence 345554443344 689999999994 44456665 2 2589999874 2 1123
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
..+.++..|+.=.+..+.. +++++... ...=++|+.+.+ .+.|..+ .....+|+.+ +-|+|..+++.
T Consensus 76 a~~~~~~~~~~~~i~~~~~-d~~~~~~~---~~~~D~Ivs~~~--~~~l~~~--~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 76 AKELVELNGFSDKITLLRG-KLEDVHLP---FPKVDIIISEWM--GYFLLYE--SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp HHHHHHHTTCTTTEEEEES-CTTTSCCS---SSCEEEEEECCC--BTTBSTT--CCHHHHHHHHHHHEEEEEEEES
T ss_pred HHHHHHHcCCCCCEEEEEC-chhhccCC---CCcccEEEEeCc--hhhcccH--HHHHHHHHHHHhhcCCCeEEEE
Confidence 3344445555322233333 34443211 111133443322 2334333 2456677766 67999988873
No 96
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=81.95 E-value=9.3 Score=35.88 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=55.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+. + -++|||+... +.-+...+.++..+..++|..-
T Consensus 62 ~~vLDiGcGtG~----~~~~l~~~~---~--~~v~gvD~s~-----------------~~l~~a~~~~~~~~~~v~~~~~ 115 (236)
T 1zx0_A 62 GRVLEVGFGMAI----AASKVQEAP---I--DEHWIIECND-----------------GVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp EEEEEECCTTSH----HHHHHHTSC---E--EEEEEEECCH-----------------HHHHHHHHHGGGCSSEEEEEES
T ss_pred CeEEEEeccCCH----HHHHHHhcC---C--CeEEEEcCCH-----------------HHHHHHHHHHHhcCCCeEEEec
Confidence 789999999983 444555542 2 3899998753 2334444555666655555433
Q ss_pred ecCCCCCCccccccCCCC--CEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 368 ESHPLQDLSSQMVSTSPE--ETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~--EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
.++++.. .+.++ ++|+.+ .+.+ +..+.....+..+|+.+ |-|+|..+++.
T Consensus 116 ---d~~~~~~---~~~~~~fD~V~~d-~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 116 ---LWEDVAP---TLPDGHFDGILYD-TYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ---CHHHHGG---GSCTTCEEEEEEC-CCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ---CHHHhhc---ccCCCceEEEEEC-Cccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 2322210 22233 344331 3333 22211123455666655 56999988774
No 97
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=81.13 E-value=3.8 Score=39.08 Aligned_cols=106 Identities=11% Similarity=0.057 Sum_probs=57.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
=+|+|+|.|.| .+...|+.+. | ..++|||+.+... +-+...+..+-++..|++ .+|..
T Consensus 26 ~~vLDiGCG~G----~~~~~la~~~---~-~~~v~GvD~s~~~-------------ml~~A~~A~~~~~~~~~~~v~~~~ 84 (225)
T 3p2e_A 26 RVHIDLGTGDG----RNIYKLAIND---Q-NTFYIGIDPVKEN-------------LFDISKKIIKKPSKGGLSNVVFVI 84 (225)
T ss_dssp EEEEEETCTTS----HHHHHHHHTC---T-TEEEEEECSCCGG-------------GHHHHHHHTSCGGGTCCSSEEEEC
T ss_pred CEEEEEeccCc----HHHHHHHHhC---C-CCEEEEEeCCHHH-------------HHHHHHHHHHHHHHcCCCCeEEEE
Confidence 57999999998 4566677653 3 4899999986321 212222223333445654 55533
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccc----cCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHH----LNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~----L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
. ..+++. ..+ .+-+..|.+.|...+ ... .. ..+|+.+ |-|+|...++.
T Consensus 85 --~-d~~~l~-~~~---~d~v~~i~~~~~~~~~~~~~~~---~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 85 --A-AAESLP-FEL---KNIADSISILFPWGTLLEYVIK---PN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp --C-BTTBCC-GGG---TTCEEEEEEESCCHHHHHHHHT---TC-HHHHHHHHTTEEEEEEEEE
T ss_pred --c-CHHHhh-hhc---cCeEEEEEEeCCCcHHhhhhhc---ch-HHHHHHHHHhcCCCcEEEE
Confidence 2 444452 211 144555555443222 111 12 3456555 56999988877
No 98
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=80.25 E-value=6.4 Score=38.26 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=25.8
Q ss_pred CCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 384 PEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 384 ~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
++..=+|-|.+.|||+.... .....+|+.+ |-|+|...+++-
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~-~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDL-ASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSH-HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCCEEEehhhhhhhcCCH-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 34354555667889976421 1345566655 569999877763
No 99
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=79.69 E-value=15 Score=35.57 Aligned_cols=30 Identities=10% Similarity=0.125 Sum_probs=23.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|. ++..||.+ | .++|||+.+
T Consensus 70 ~~vLD~GCG~G~----~~~~La~~--G----~~V~gvD~S 99 (252)
T 2gb4_A 70 LRVFFPLCGKAI----EMKWFADR--G----HTVVGVEIS 99 (252)
T ss_dssp CEEEETTCTTCT----HHHHHHHT--T----CEEEEECSC
T ss_pred CeEEEeCCCCcH----HHHHHHHC--C----CeEEEEECC
Confidence 789999999985 35567776 3 489999875
No 100
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=79.27 E-value=18 Score=31.51 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=58.9
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHH
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL 351 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+. + ..++|+|+.... .-+..
T Consensus 26 ~~~~~~~~~~~-----~~vLdiG~G~G~----~~~~l~~-----~-~~~v~~vD~~~~-----------------~~~~a 73 (183)
T 2yxd_A 26 VSIGKLNLNKD-----DVVVDVGCGSGG----MTVEIAK-----R-CKFVYAIDYLDG-----------------AIEVT 73 (183)
T ss_dssp HHHHHHCCCTT-----CEEEEESCCCSH----HHHHHHT-----T-SSEEEEEECSHH-----------------HHHHH
T ss_pred HHHHHcCCCCC-----CEEEEeCCCCCH----HHHHHHh-----c-CCeEEEEeCCHH-----------------HHHHH
Confidence 45555544444 689999999986 4445554 2 479999987432 23344
Q ss_pred HHHHHhcCc-eEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 352 LGFAKSMNI-NLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 352 ~~fA~~lgV-pFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
.+.++..|+ .++|... ++.+ .+.-..=+.++.+.. .....+|+.++++ |...++...
T Consensus 74 ~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D~i~~~~~-----------~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 74 KQNLAKFNIKNCQIIKG---RAED----VLDKLEFNKAFIGGT-----------KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp HHHHHHTTCCSEEEEES---CHHH----HGGGCCCSEEEECSC-----------SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred HHHHHHcCCCcEEEEEC---Cccc----cccCCCCcEEEECCc-----------ccHHHHHHHHhhC-CCCEEEEEe
Confidence 444555565 3444332 2221 111122245554433 1346789999999 887666543
No 101
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=77.32 E-value=8.4 Score=37.54 Aligned_cols=119 Identities=12% Similarity=0.214 Sum_probs=64.1
Q ss_pred HhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHH
Q 008559 267 NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDN 346 (561)
Q Consensus 267 ftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~e 346 (561)
|..+..|++.+-..-. ....-+|+|+|.|.|. |...|+.+. .-++|+|+..
T Consensus 13 fl~d~~i~~~iv~~~~-~~~~~~VLDiG~G~G~----lt~~L~~~~-----~~~v~avEid------------------- 63 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELN-IEEGNTVVEVGGGTGN----LTKVLLQHP-----LKKLYVIELD------------------- 63 (249)
T ss_dssp CEECHHHHHHHHHHTT-CCTTCEEEEEESCHHH----HHHHHTTSC-----CSEEEEECCC-------------------
T ss_pred ccCCHHHHHHHHHhcC-CCCcCEEEEEcCchHH----HHHHHHHcC-----CCeEEEEECC-------------------
Confidence 5555555444422211 1122689999999875 677888772 3589999864
Q ss_pred HHHHHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhc--CCCEEEE
Q 008559 347 YSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSL--EPKGVIL 424 (561)
Q Consensus 347 tg~rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L--~PkvVvl 424 (561)
.++.+.|+..+ .-.++.+.. +...++...+. ..-.|+-|..+.+ .-..+++++... -++.+++
T Consensus 64 --~~~~~~~~~~~-~~~v~~i~~-D~~~~~~~~~~--~~~~vv~NlPy~i---------~~~il~~ll~~~~~~~~~~~m 128 (249)
T 3ftd_A 64 --REMVENLKSIG-DERLEVINE-DASKFPFCSLG--KELKVVGNLPYNV---------ASLIIENTVYNKDCVPLAVFM 128 (249)
T ss_dssp --HHHHHHHTTSC-CTTEEEECS-CTTTCCGGGSC--SSEEEEEECCTTT---------HHHHHHHHHHTGGGCSEEEEE
T ss_pred --HHHHHHHHhcc-CCCeEEEEc-chhhCChhHcc--CCcEEEEECchhc---------cHHHHHHHHhcCCCCceEEEE
Confidence 34445555431 112334443 44444444321 1225555765532 123456666543 4677777
Q ss_pred EeccC
Q 008559 425 SENNM 429 (561)
Q Consensus 425 vE~ea 429 (561)
+..|.
T Consensus 129 ~Qkev 133 (249)
T 3ftd_A 129 VQKEV 133 (249)
T ss_dssp EEHHH
T ss_pred EeHHH
Confidence 77764
No 102
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=77.08 E-value=13 Score=37.47 Aligned_cols=145 Identities=12% Similarity=0.044 Sum_probs=76.8
Q ss_pred HHHHHHhhccCCCCCchhHhhhHHHHHHH----hcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEe
Q 008559 249 QKSLLNFYDKSPWFAFPNNIANSSILQIL----AQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTII 324 (561)
Q Consensus 249 ~~A~~~f~e~sP~~kfahftANqAILEA~----~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI 324 (561)
..+-..+.++.|.+. ...-+|.+-|.-+ .++.. +=+|+|+|.|.|.. ..+..++.+. .| ..|||+|
T Consensus 42 r~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g----~~q~LDLGcG~pT~--~~~~~la~~~--~P-~arVv~V 111 (277)
T 3giw_A 42 KEAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAG----IRQFLDIGTGIPTS--PNLHEIAQSV--AP-ESRVVYV 111 (277)
T ss_dssp HHHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSC----CCEEEEESCCSCCS--SCHHHHHHHH--CT-TCEEEEE
T ss_pred HHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccC----CCEEEEeCCCCCcc--cHHHHHHHHH--CC-CCEEEEE
Confidence 345566777788863 3345788777643 32222 24799999997542 2234444332 13 4799999
Q ss_pred cCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEEecCCCCCCc--------cccccCCCCCEEEEEeeccc
Q 008559 325 APTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLS--------SQMVSTSPEETLIVCTQFRL 396 (561)
Q Consensus 325 ~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V~~~~le~L~--------~~~L~~~~~EaLaVN~~f~L 396 (561)
+.+..- ++....+|.+. -.-..+|... .+.++. ... +..++.++|-+..-|
T Consensus 112 D~sp~m-------------La~Ar~~l~~~---~~~~~~~v~a---D~~~~~~~l~~~~~~~~--~D~~~p~av~~~avL 170 (277)
T 3giw_A 112 DNDPIV-------------LTLSQGLLAST---PEGRTAYVEA---DMLDPASILDAPELRDT--LDLTRPVALTVIAIV 170 (277)
T ss_dssp ECCHHH-------------HHTTHHHHCCC---SSSEEEEEEC---CTTCHHHHHTCHHHHTT--CCTTSCCEEEEESCG
T ss_pred eCChHH-------------HHHHHHHhccC---CCCcEEEEEe---cccChhhhhcccccccc--cCcCCcchHHhhhhH
Confidence 875321 12222232211 0123444443 333331 112 233555566677789
Q ss_pred cccCCCCCchHHHHHHHHHhcCCCEEEEE
Q 008559 397 HHLNHSTPDERTEFLRVLRSLEPKGVILS 425 (561)
Q Consensus 397 H~L~~es~~~r~~~L~~IR~L~PkvVvlv 425 (561)
|||.+.. .+...+=+..+.|.|..++++
T Consensus 171 H~l~d~~-~p~~~l~~l~~~L~PGG~Lvl 198 (277)
T 3giw_A 171 HFVLDED-DAVGIVRRLLEPLPSGSYLAM 198 (277)
T ss_dssp GGSCGGG-CHHHHHHHHHTTSCTTCEEEE
T ss_pred hcCCchh-hHHHHHHHHHHhCCCCcEEEE
Confidence 9998631 233434455577999865554
No 103
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=76.91 E-value=15 Score=33.50 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=48.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...| | .-++|||+.... ..+.|+...-.++| +
T Consensus 38 ~~vLdiG~G~G~----~~~~l-----~---~~~v~~vD~s~~---------------------~~~~a~~~~~~~~~--~ 82 (211)
T 2gs9_A 38 ESLLEVGAGTGY----WLRRL-----P---YPQKVGVEPSEA---------------------MLAVGRRRAPEATW--V 82 (211)
T ss_dssp SEEEEETCTTCH----HHHHC-----C---CSEEEEECCCHH---------------------HHHHHHHHCTTSEE--E
T ss_pred CeEEEECCCCCH----hHHhC-----C---CCeEEEEeCCHH---------------------HHHHHHHhCCCcEE--E
Confidence 689999999984 23333 1 128999986421 12222222112233 2
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE 426 (561)
.. .++++ ...++..=+|-|...|||+.+ + ..+|+. .+-|+|..++++.
T Consensus 83 ~~-d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 83 RA-WGEAL-----PFPGESFDVVLLFTTLEFVED----V-ERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp CC-CTTSC-----CSCSSCEEEEEEESCTTTCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred Ec-ccccC-----CCCCCcEEEEEEcChhhhcCC----H-HHHHHHHHHHcCCCCEEEEE
Confidence 22 23332 233333333445567888853 4 455555 4668999766653
No 104
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=76.80 E-value=5.6 Score=42.74 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=62.3
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
.+|++.+...+. -+|+|+|.|.|. |...|+.++ ..+|+||+.+. .-..
T Consensus 148 ~~il~~l~~~~~-----~~VLDiGcGtG~----la~~la~~~-----~~~V~gvD~s~------------------~l~~ 195 (480)
T 3b3j_A 148 RAILQNHTDFKD-----KIVLDVGCGSGI----LSFFAAQAG-----ARKIYAVEAST------------------MAQH 195 (480)
T ss_dssp HHHHHTGGGTTT-----CEEEEESCSTTH----HHHHHHHTT-----CSEEEEEECHH------------------HHHH
T ss_pred HHHHHhhhhcCC-----CEEEEecCcccH----HHHHHHHcC-----CCEEEEEEcHH------------------HHHH
Confidence 345555544344 799999999986 445666642 36999998631 1233
Q ss_pred HHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 351 LLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 351 L~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
..+.++..|+.=.+..+.. +++++... ..=++|+.|. -+||+.++ .....+....+-|+|..+++.+.
T Consensus 196 A~~~~~~~gl~~~v~~~~~-d~~~~~~~----~~fD~Ivs~~--~~~~~~~e--~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 196 AEVLVKSNNLTDRIVVIPG-KVEEVSLP----EQVDIIISEP--MGYMLFNE--RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHHHHTTCTTTEEEEES-CTTTCCCS----SCEEEEECCC--CHHHHTCH--HHHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHcCCCCcEEEEEC-chhhCccC----CCeEEEEEeC--chHhcCcH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 3444555566322333333 34443211 1113343332 34555532 23444555557799999888543
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=76.79 E-value=29 Score=31.83 Aligned_cols=109 Identities=13% Similarity=0.187 Sum_probs=57.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc-eEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI-NLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV-pFeF~~ 366 (561)
-.|+|+|.|.|. +...|+.+- | ..+++||+.... .-....+-++..|+ .++|..
T Consensus 43 ~~vLDiGcG~G~----~~~~la~~~---p-~~~v~gvD~s~~-----------------~l~~a~~~~~~~~~~~v~~~~ 97 (214)
T 1yzh_A 43 PIHVEVGSGKGA----FVSGMAKQN---P-DINYIGIDIQKS-----------------VLSYALDKVLEVGVPNIKLLW 97 (214)
T ss_dssp CEEEEESCTTSH----HHHHHHHHC---T-TSEEEEEESCHH-----------------HHHHHHHHHHHHCCSSEEEEE
T ss_pred CeEEEEccCcCH----HHHHHHHHC---C-CCCEEEEEcCHH-----------------HHHHHHHHHHHcCCCCEEEEe
Confidence 579999999984 445556553 2 479999987532 22333344445565 344433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCch----HHHHHHHHH-hcCCCEEEEEecc
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDE----RTEFLRVLR-SLEPKGVILSENN 428 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~----r~~~L~~IR-~L~PkvVvlvE~e 428 (561)
- .+.++. +.+.-..=+.|++|.. .+.... ...+ ...+|+.+. .|+|..+++++.+
T Consensus 98 ~---d~~~~~-~~~~~~~~D~i~~~~~--~~~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 98 V---DGSDLT-DYFEDGEIDRLYLNFS--DPWPKK-RHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C---CSSCGG-GTSCTTCCSEEEEESC--CCCCSG-GGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C---CHHHHH-hhcCCCCCCEEEEECC--CCcccc-chhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 2 333322 1111112246666643 211110 0001 246777765 4999988888654
No 106
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=76.66 E-value=27 Score=31.64 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=58.8
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..+++.+.-.+. -+|+|+|.|.|. +...|+.+ + | ..++|+|+.... .-+.
T Consensus 30 ~~~l~~l~~~~~-----~~vLDiG~G~G~----~~~~la~~--~-~-~~~v~~vD~s~~-----------------~~~~ 79 (204)
T 3e05_A 30 AVTLSKLRLQDD-----LVMWDIGAGSAS----VSIEASNL--M-P-NGRIFALERNPQ-----------------YLGF 79 (204)
T ss_dssp HHHHHHTTCCTT-----CEEEEETCTTCH----HHHHHHHH--C-T-TSEEEEEECCHH-----------------HHHH
T ss_pred HHHHHHcCCCCC-----CEEEEECCCCCH----HHHHHHHH--C-C-CCEEEEEeCCHH-----------------HHHH
Confidence 345555544444 789999999886 34455554 2 2 479999987532 2333
Q ss_pred HHHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 351 LLGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.++..|++ ++|..-.. .+.+.. ...=++++++..+ + ....+|+.+ +.|+|...+++.
T Consensus 80 a~~~~~~~~~~~v~~~~~d~--~~~~~~----~~~~D~i~~~~~~--~--------~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 80 IRDNLKKFVARNVTLVEAFA--PEGLDD----LPDPDRVFIGGSG--G--------MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp HHHHHHHHTCTTEEEEECCT--TTTCTT----SCCCSEEEESCCT--T--------CHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHhCCCcEEEEeCCh--hhhhhc----CCCCCEEEECCCC--c--------CHHHHHHHHHHhcCCCeEEEEE
Confidence 44444555653 44433221 122211 1222355544322 1 234556555 569999888764
No 107
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=76.60 E-value=11 Score=34.95 Aligned_cols=97 Identities=19% Similarity=0.266 Sum_probs=53.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+ ++ ++|||+.... ..+.|+...-.++|...
T Consensus 42 ~~vLdiG~G~G~----~~~~l~~~--~~----~v~~~D~s~~---------------------~~~~a~~~~~~~~~~~~ 90 (239)
T 3bxo_A 42 SSLLDVACGTGT----HLEHFTKE--FG----DTAGLELSED---------------------MLTHARKRLPDATLHQG 90 (239)
T ss_dssp CEEEEETCTTSH----HHHHHHHH--HS----EEEEEESCHH---------------------HHHHHHHHCTTCEEEEC
T ss_pred CeEEEecccCCH----HHHHHHHh--CC----cEEEEeCCHH---------------------HHHHHHHhCCCCEEEEC
Confidence 689999999985 34445554 21 7999987432 11222222112333332
Q ss_pred ecCCCCCCccccccCCCCC-EEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEE-TLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~E-aLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.+.++. . ++. -+||++.-.+||+.+ +.....+|+.+ +.|+|..+++++
T Consensus 91 ---d~~~~~-----~-~~~~D~v~~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 91 ---DMRDFR-----L-GRKFSAVVSMFSSVGYLKT--TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp ---CTTTCC-----C-SSCEEEEEECTTGGGGCCS--HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---CHHHcc-----c-CCCCcEEEEcCchHhhcCC--HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 233222 2 222 244433337888864 13456677766 568999888875
No 108
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=76.32 E-value=24 Score=31.74 Aligned_cols=111 Identities=13% Similarity=0.146 Sum_probs=54.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+- + | .-++|||+.... .-+...+.++..|+.-.+..+
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~-~-~-~~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~v~~~ 79 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLV-G-E-NGRVFGFDIQDK-----------------AIANTTKKLTDLNLIDRVTLI 79 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHH-C-T-TCEEEEECSCHH-----------------HHHHHHHHHHHTTCGGGEEEE
T ss_pred CEEEEcCCCCCH----HHHHHHHHh-C-C-CCEEEEEECCHH-----------------HHHHHHHHHHHcCCCCCeEEE
Confidence 579999999983 444555542 1 1 258999987532 233444445556662223333
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccc---cccCCCCCchHHHHHHH-HHhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRL---HHLNHSTPDERTEFLRV-LRSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~L---H~L~~es~~~r~~~L~~-IR~L~PkvVvlvE 426 (561)
.. +++++.. .+. ..=+.|+.|..+.- |+.... +.....+|+. .+-|+|...+++.
T Consensus 80 ~~-d~~~~~~-~~~-~~fD~v~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 80 KD-GHQNMDK-YID-CPVKAVMFNLGYLPSGDHSISTR-PETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp CS-CGGGGGG-TCC-SCEEEEEEEESBCTTSCTTCBCC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EC-CHHHHhh-hcc-CCceEEEEcCCcccCcccccccC-cccHHHHHHHHHHhCcCCCEEEEE
Confidence 33 2322221 011 12246666655410 111111 1122335555 4669998776653
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=75.38 E-value=18 Score=32.85 Aligned_cols=114 Identities=12% Similarity=0.113 Sum_probs=62.0
Q ss_pred hHhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHH
Q 008559 266 NNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGD 345 (561)
Q Consensus 266 hftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~ 345 (561)
+.-..+.+++.+..... ..-.|+|+|.|.|. +...|+.++ ..++++|+....
T Consensus 43 ~~~~~~~~~~~l~~~~~---~~~~vLDiG~G~G~----~~~~l~~~~-----~~~v~~vD~s~~---------------- 94 (205)
T 3grz_A 43 NHQTTQLAMLGIERAMV---KPLTVADVGTGSGI----LAIAAHKLG-----AKSVLATDISDE---------------- 94 (205)
T ss_dssp CHHHHHHHHHHHHHHCS---SCCEEEEETCTTSH----HHHHHHHTT-----CSEEEEEESCHH----------------
T ss_pred CCccHHHHHHHHHHhcc---CCCEEEEECCCCCH----HHHHHHHCC-----CCEEEEEECCHH----------------
Confidence 44555667777763211 12689999999983 444467652 368999987532
Q ss_pred HHHHHHHHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEE
Q 008559 346 NYSLQLLGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVI 423 (561)
Q Consensus 346 etg~rL~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVv 423 (561)
.-+...+.++..++. ++|.... +.+... ..=+.|+.| .-+|+ ...+|+.+ +.|+|...+
T Consensus 95 -~~~~a~~~~~~~~~~~v~~~~~d---~~~~~~-----~~fD~i~~~--~~~~~--------~~~~l~~~~~~L~~gG~l 155 (205)
T 3grz_A 95 -SMTAAEENAALNGIYDIALQKTS---LLADVD-----GKFDLIVAN--ILAEI--------LLDLIPQLDSHLNEDGQV 155 (205)
T ss_dssp -HHHHHHHHHHHTTCCCCEEEESS---TTTTCC-----SCEEEEEEE--SCHHH--------HHHHGGGSGGGEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCceEEEecc---ccccCC-----CCceEEEEC--CcHHH--------HHHHHHHHHHhcCCCCEE
Confidence 233444445556665 5554332 222111 111344444 22333 24555555 458998877
Q ss_pred EEe
Q 008559 424 LSE 426 (561)
Q Consensus 424 lvE 426 (561)
++.
T Consensus 156 ~~~ 158 (205)
T 3grz_A 156 IFS 158 (205)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 110
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=74.90 E-value=28 Score=30.56 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=27.6
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
..+++.+-. +. -+|+|+|.|.|. +...|+.+ | .++|+|+..
T Consensus 37 ~~~l~~~~~-~~-----~~vLdiG~G~G~----~~~~l~~~--~----~~v~~~D~~ 77 (195)
T 3cgg_A 37 ARLIDAMAP-RG-----AKILDAGCGQGR----IGGYLSKQ--G----HDVLGTDLD 77 (195)
T ss_dssp HHHHHHHSC-TT-----CEEEEETCTTTH----HHHHHHHT--T----CEEEEEESC
T ss_pred HHHHHHhcc-CC-----CeEEEECCCCCH----HHHHHHHC--C----CcEEEEcCC
Confidence 455666533 33 689999999885 44556665 2 389999874
No 111
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=74.36 E-value=5.5 Score=40.27 Aligned_cols=120 Identities=21% Similarity=0.248 Sum_probs=64.8
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
..+.|++.+..... -+|+|+|.|.|. +...|+.+ + | ..++|+|+.+.. .-
T Consensus 184 ~~~~ll~~l~~~~~-----~~VLDlGcG~G~----~~~~la~~--~-~-~~~v~~vD~s~~-----------------~l 233 (343)
T 2pjd_A 184 GSQLLLSTLTPHTK-----GKVLDVGCGAGV----LSVAFARH--S-P-KIRLTLCDVSAP-----------------AV 233 (343)
T ss_dssp HHHHHHHHSCTTCC-----SBCCBTTCTTSH----HHHHHHHH--C-T-TCBCEEEESBHH-----------------HH
T ss_pred HHHHHHHhcCcCCC-----CeEEEecCccCH----HHHHHHHH--C-C-CCEEEEEECCHH-----------------HH
Confidence 46778888754333 479999999986 33445544 2 3 478999987532 12
Q ss_pred HHHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 349 LQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 349 ~rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
+...+.++..++..+|. .. ...+. . -..=+.|+.|.. +|+...........+|+.+ +-|+|...+++..
T Consensus 234 ~~a~~~~~~~~~~~~~~--~~-d~~~~----~-~~~fD~Iv~~~~--~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 234 EASRATLAANGVEGEVF--AS-NVFSE----V-KGRFDMIISNPP--FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp HHHHHHHHHTTCCCEEE--EC-STTTT----C-CSCEEEEEECCC--CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEE--Ec-ccccc----c-cCCeeEEEECCC--cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 23333344466666663 32 22111 1 111135555544 4432211112345666665 5589998877654
Q ss_pred c
Q 008559 428 N 428 (561)
Q Consensus 428 e 428 (561)
+
T Consensus 304 ~ 304 (343)
T 2pjd_A 304 N 304 (343)
T ss_dssp E
T ss_pred c
Confidence 3
No 112
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=73.43 E-value=2.9 Score=39.37 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=55.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+ ++ ++|||+.+... ++.+.++ +.. -..+|...
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~----~v~gvD~s~~~-------------~~~a~~~----~~~--~~~~~~~~ 108 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP----RVIGLDVSKSA-------------LEIAAKE----NTA--ANISYRLL 108 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS----CEEEEESCHHH-------------HHHHHHH----SCC--TTEEEEEC
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC----CEEEEECCHHH-------------HHHHHHh----Ccc--cCceEEEC
Confidence 579999999884 55566665 22 78999874320 1111111 111 13444332
Q ss_pred ecCCCCCCccccccCCCC-CEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEE-EEEeccCC
Q 008559 368 ESHPLQDLSSQMVSTSPE-ETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGV-ILSENNMD 430 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~-EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvV-vlvE~ead 430 (561)
.+.++.... ....+ -.-+|-+...+||+.. ..+..+|+.+ +.|+|..+ +++|....
T Consensus 109 ---d~~~~~~~~-~~~~~~~~d~v~~~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 109 ---DGLVPEQAA-QIHSEIGDANIYMRTGFHHIPV---EKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp ---CTTCHHHHH-HHHHHHCSCEEEEESSSTTSCG---GGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred ---ccccccccc-ccccccCccEEEEcchhhcCCH---HHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 333322210 01000 0234555567888864 2455666665 56999875 55665443
No 113
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=73.03 E-value=6.7 Score=38.86 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=28.2
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+.+ | -++|||+.+
T Consensus 36 ~il~~l~l~~g-----~~VLDlGcGtG~----~a~~La~~--g----~~V~gvD~S 76 (261)
T 3iv6_A 36 NDIFLENIVPG-----STVAVIGASTRF----LIEKALER--G----ASVTVFDFS 76 (261)
T ss_dssp HHHHTTTCCTT-----CEEEEECTTCHH----HHHHHHHT--T----CEEEEEESC
T ss_pred HHHHhcCCCCc-----CEEEEEeCcchH----HHHHHHhc--C----CEEEEEECC
Confidence 45555543344 789999999986 55566765 2 379999875
No 114
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=72.95 E-value=8.8 Score=41.16 Aligned_cols=119 Identities=8% Similarity=0.099 Sum_probs=66.2
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..|++.+.-.+. =+|+|+|.|.|. ++-.||.+.+ .-+++||+.... .-+..++
T Consensus 163 ~~il~~l~l~~g-----d~VLDLGCGtG~----l~l~lA~~~g----~~kVvGIDiS~~--------------~lelAr~ 215 (438)
T 3uwp_A 163 AQMIDEIKMTDD-----DLFVDLGSGVGQ----VVLQVAAATN----CKHHYGVEKADI--------------PAKYAET 215 (438)
T ss_dssp HHHHHHHCCCTT-----CEEEEESCTTSH----HHHHHHHHCC----CSEEEEEECCHH--------------HHHHHHH
T ss_pred HHHHHhcCCCCC-----CEEEEeCCCCCH----HHHHHHHHCC----CCEEEEEeCCHH--------------HHHHHHH
Confidence 445555543344 689999999984 3334454432 247999987532 2233333
Q ss_pred H-H---HHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEE
Q 008559 351 L-L---GFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS 425 (561)
Q Consensus 351 L-~---~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlv 425 (561)
. . +.++.+|+. -.+..+.. ++.++.... .+..-.+|++|..+ + . ++....+....|.|+|...+++
T Consensus 216 n~e~frkr~~~~Gl~~~rVefi~G-D~~~lp~~d-~~~~aDVVf~Nn~~--F--~---pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 216 MDREFRKWMKWYGKKHAEYTLERG-DFLSEEWRE-RIANTSVIFVNNFA--F--G---PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp HHHHHHHHHHHHTBCCCEEEEEEC-CTTSHHHHH-HHHTCSEEEECCTT--C--C---HHHHHHHHHHHTTSCTTCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEC-cccCCcccc-ccCCccEEEEcccc--c--C---chHHHHHHHHHHcCCCCcEEEE
Confidence 2 2 335666762 34444544 444433211 11233577777643 1 1 2456667777888999987776
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=72.78 E-value=49 Score=34.23 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=68.6
Q ss_pred hhHHHHHHHhcCcc-CcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHH
Q 008559 269 ANSSILQILAQDRH-NQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNY 347 (561)
Q Consensus 269 ANqAILEA~~g~~~-~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~et 347 (561)
....+++.+..... .....-+|+|+|.|.|.- ...|+.+ | .+||+|+.... .
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~----~~~la~~--g----~~V~gvDis~~-----------------a 267 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGAL----TLPLARM--G----AEVVGVEDDLA-----------------S 267 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTT----HHHHHHT--T----CEEEEEESBHH-----------------H
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHH----HHHHHHc--C----CEEEEEECCHH-----------------H
Confidence 44566666643110 011226899999999963 4445555 2 48999987432 2
Q ss_pred HHHHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEe
Q 008559 348 SLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSE 426 (561)
Q Consensus 348 g~rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE 426 (561)
-+...+-++..++..+|..-. +.++... -..=+.|+.|.. +|+...........+|+. .+.|+|...+++.
T Consensus 268 l~~A~~n~~~~~~~v~~~~~D---~~~~~~~---~~~fD~Ii~npp--~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 268 VLSLQKGLEANALKAQALHSD---VDEALTE---EARFDIIVTNPP--FHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp HHHHHHHHHHTTCCCEEEECS---TTTTSCT---TCCEEEEEECCC--CCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEcc---hhhcccc---CCCeEEEEECCc--hhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 233344455567776665432 3222111 112245666655 455333222345566665 4669999888876
Q ss_pred ccCC
Q 008559 427 NNMD 430 (561)
Q Consensus 427 ~ead 430 (561)
.+..
T Consensus 340 ~n~~ 343 (381)
T 3dmg_A 340 SNPF 343 (381)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 5443
No 116
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=72.24 E-value=34 Score=34.51 Aligned_cols=97 Identities=12% Similarity=0.210 Sum_probs=53.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
-+|+|+|.|.|. |...|+.+ | ..+++||+... . ++. ..+.++..|+ .++|
T Consensus 66 ~~VLDiGcGtG~----ls~~la~~--g---~~~v~gvD~s~-~-------------~~~----a~~~~~~~~~~~~i~~- 117 (340)
T 2fyt_A 66 KVVLDVGCGTGI----LSMFAAKA--G---AKKVLGVDQSE-I-------------LYQ----AMDIIRLNKLEDTITL- 117 (340)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--T---CSEEEEEESST-H-------------HHH----HHHHHHHTTCTTTEEE-
T ss_pred CEEEEeeccCcH----HHHHHHHc--C---CCEEEEEChHH-H-------------HHH----HHHHHHHcCCCCcEEE-
Confidence 689999999994 45566665 2 25899998742 1 222 2333344454 2344
Q ss_pred EEecCCCCCCccccccCCCC--CEEEEEee-ccccccCCCCCchHHHHHHHH-HhcCCCEEEE
Q 008559 366 RLESHPLQDLSSQMVSTSPE--ETLIVCTQ-FRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL 424 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~--EaLaVN~~-f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl 424 (561)
+.. +++++. +.++ ++|+.+.+ +.|++ + .....+|+.+ |-|+|..+++
T Consensus 118 -~~~-d~~~~~-----~~~~~~D~Ivs~~~~~~l~~---~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 118 -IKG-KIEEVH-----LPVEKVDVIISEWMGYFLLF---E--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -EES-CTTTSC-----CSCSCEEEEEECCCBTTBTT---T--CHHHHHHHHHHHHEEEEEEEE
T ss_pred -EEe-eHHHhc-----CCCCcEEEEEEcCchhhccC---H--HHHHHHHHHHHhhcCCCcEEE
Confidence 333 344332 2222 34444432 23332 2 3456777776 6699998877
No 117
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=72.04 E-value=4.6 Score=44.05 Aligned_cols=107 Identities=19% Similarity=0.205 Sum_probs=63.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcC-ceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMN-INLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lg-VpFeF~~ 366 (561)
+.|+|+|.|-|. |-..||++ | -++|||+..... + ..-...|+.-| +..+|..
T Consensus 68 ~~vLDvGCG~G~----~~~~la~~--g----a~V~giD~~~~~-------------i----~~a~~~a~~~~~~~~~~~~ 120 (569)
T 4azs_A 68 LNVLDLGCAQGF----FSLSLASK--G----ATIVGIDFQQEN-------------I----NVCRALAEENPDFAAEFRV 120 (569)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--T----CEEEEEESCHHH-------------H----HHHHHHHHTSTTSEEEEEE
T ss_pred CeEEEECCCCcH----HHHHHHhC--C----CEEEEECCCHHH-------------H----HHHHHHHHhcCCCceEEEE
Confidence 899999999995 77888886 3 378999975321 1 11123455454 6777776
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHH---HHHHHHHhcCCCEEEEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERT---EFLRVLRSLEPKGVILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~---~~L~~IR~L~PkvVvlvE~ead 430 (561)
... |+|.. ...++..=||.|+--|||+.+. .... .|++.|++ +++.++++...+.
T Consensus 121 ~~~---~~~~~---~~~~~~fD~v~~~e~~ehv~~~--~~~~~~~~~~~tl~~-~~~~~~~~~~~~e 178 (569)
T 4azs_A 121 GRI---EEVIA---ALEEGEFDLAIGLSVFHHIVHL--HGIDEVKRLLSRLAD-VTQAVILELAVKE 178 (569)
T ss_dssp CCH---HHHHH---HCCTTSCSEEEEESCHHHHHHH--HCHHHHHHHHHHHHH-HSSEEEEECCCTT
T ss_pred CCH---HHHhh---hccCCCccEEEECcchhcCCCH--HHHHHHHHHHHHhcc-ccceeeEEecccc
Confidence 543 32211 1234445577778889999752 1222 34444432 3566666655444
No 118
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=70.36 E-value=16 Score=34.41 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=58.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-.|+|+|.|.|. ++..||.+. | ..+++||+.... .-....+.++..|+. ++|.
T Consensus 36 ~~vLDiGcG~G~----~~~~lA~~~---p-~~~v~giD~s~~-----------------~l~~a~~~~~~~~l~nv~~~- 89 (218)
T 3dxy_A 36 PVTLEIGFGMGA----SLVAMAKDR---P-EQDFLGIEVHSP-----------------GVGACLASAHEEGLSNLRVM- 89 (218)
T ss_dssp CEEEEESCTTCH----HHHHHHHHC---T-TSEEEEECSCHH-----------------HHHHHHHHHHHTTCSSEEEE-
T ss_pred CeEEEEeeeChH----HHHHHHHHC---C-CCeEEEEEecHH-----------------HHHHHHHHHHHhCCCcEEEE-
Confidence 579999999995 445556542 3 478999987532 233444455566653 4443
Q ss_pred EecCCCCCCccccccCCCC--CEEEEEeeccccccCCCC-CchHHHHHHHH-HhcCCCEEEEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPE--ETLIVCTQFRLHHLNHST-PDERTEFLRVL-RSLEPKGVILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~--EaLaVN~~f~LH~L~~es-~~~r~~~L~~I-R~L~PkvVvlvE~ead 430 (561)
.. +..++-+.. +.++ +.|++|+..-.++..+.. .--...||+.+ +.|+|..++++.-+..
T Consensus 90 -~~-Da~~~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 90 -CH-DAVEVLHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp -CS-CHHHHHHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred -EC-CHHHHHHHH--cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 22 222211111 2233 344455333222221100 00013578877 5599999988776543
No 119
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=69.92 E-value=16 Score=34.85 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=57.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-.|+|+|.|.|.--. .|+.+- |+ ..+||+|+... +.-....+.++..|+. ++|.
T Consensus 65 ~~VLdiG~G~G~~~~----~la~~~--~~-~~~v~~vD~s~-----------------~~~~~a~~~~~~~g~~~~v~~~ 120 (248)
T 3tfw_A 65 KRILEIGTLGGYSTI----WMAREL--PA-DGQLLTLEADA-----------------HHAQVARENLQLAGVDQRVTLR 120 (248)
T ss_dssp SEEEEECCTTSHHHH----HHHTTS--CT-TCEEEEEECCH-----------------HHHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEecCCchHHHH----HHHHhC--CC-CCEEEEEECCH-----------------HHHHHHHHHHHHcCCCCcEEEE
Confidence 689999999985433 444432 22 47999998743 2334445556666765 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ead 430 (561)
.-.. .+.-+..-....=+.|++++. ......+|+. .+-|+|..+++++.-..
T Consensus 121 ~~d~---~~~l~~~~~~~~fD~V~~d~~----------~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 121 EGPA---LQSLESLGECPAFDLIFIDAD----------KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp ESCH---HHHHHTCCSCCCCSEEEECSC----------GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EcCH---HHHHHhcCCCCCeEEEEECCc----------hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 3321 111000000112245555431 1233445555 46799999998865443
No 120
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=68.47 E-value=32 Score=30.91 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=53.3
Q ss_pred EEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEEe
Q 008559 289 HILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLE 368 (561)
Q Consensus 289 HIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V~ 368 (561)
.|+|+|.|.|. +...|+.+ | .++|+|+.... .-....+.++..++.++|...
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~----~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~~~~~~~- 83 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G----YEVTAVDQSSV-----------------GLAKAKQLAQEKGVKITTVQS- 83 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T----CEEEEECSSHH-----------------HHHHHHHHHHHHTCCEEEECC-
T ss_pred CEEEECCCCCH----hHHHHHhC--C----CeEEEEECCHH-----------------HHHHHHHHHHhcCCceEEEEc-
Confidence 89999999875 44556665 2 48999987432 223333334444555555433
Q ss_pred cCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 369 SHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 369 ~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
++.++. +.-..=+.|+.+ + .|+. ......+|+.+ +.|+|..++++..
T Consensus 84 --d~~~~~---~~~~~fD~v~~~--~--~~~~---~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 84 --NLADFD---IVADAWEGIVSI--F--CHLP---SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp --BTTTBS---CCTTTCSEEEEE--C--CCCC---HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred --ChhhcC---CCcCCccEEEEE--h--hcCC---HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 233332 111112344432 2 3332 13455666666 5589998777654
No 121
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=67.57 E-value=21 Score=37.28 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=57.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
=+|+|+|.|.| +|--+|.|.|. -++++|+.+. +. ....+.++..|+.=.+..|
T Consensus 85 k~VLDvG~GtG-----iLs~~Aa~aGA----~~V~ave~s~---------------~~---~~a~~~~~~n~~~~~i~~i 137 (376)
T 4hc4_A 85 KTVLDVGAGTG-----ILSIFCAQAGA----RRVYAVEASA---------------IW---QQAREVVRFNGLEDRVHVL 137 (376)
T ss_dssp CEEEEETCTTS-----HHHHHHHHTTC----SEEEEEECST---------------TH---HHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEeCCCcc-----HHHHHHHHhCC----CEEEEEeChH---------------HH---HHHHHHHHHcCCCceEEEE
Confidence 35899999988 44455666543 4789998531 11 2333445556665455566
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEE
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVIL 424 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvl 424 (561)
.. ++++++.. ..=-|+|. ..--+-|..+ +....+|... |-|+|..+++
T Consensus 138 ~~-~~~~~~lp-----e~~Dvivs-E~~~~~l~~e--~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 138 PG-PVETVELP-----EQVDAIVS-EWMGYGLLHE--SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ES-CTTTCCCS-----SCEEEEEC-CCCBTTBTTT--CSHHHHHHHHHHHEEEEEEEE
T ss_pred ee-eeeeecCC-----ccccEEEe-eccccccccc--chhhhHHHHHHhhCCCCceEC
Confidence 65 56665422 11112332 2222345554 3577888877 5589998776
No 122
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=67.32 E-value=9.7 Score=37.40 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=24.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-.|+|+|.|.| .+...|+.+-+ ..+||||+...
T Consensus 48 ~~VLDiGCG~G----~~~~~la~~~~----~~~v~gvDis~ 80 (292)
T 3g07_A 48 RDVLDLGCNVG----HLTLSIACKWG----PSRMVGLDIDS 80 (292)
T ss_dssp SEEEEESCTTC----HHHHHHHHHTC----CSEEEEEESCH
T ss_pred CcEEEeCCCCC----HHHHHHHHHcC----CCEEEEECCCH
Confidence 68999999999 45556666532 25999998753
No 123
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=66.91 E-value=74 Score=29.21 Aligned_cols=106 Identities=18% Similarity=0.176 Sum_probs=60.5
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHH
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQ 350 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~r 350 (561)
..+++.+.-.+. -.|+|+|.|.|. +...|+.+ + .++|+|+... +.-+.
T Consensus 45 ~~~l~~l~~~~~-----~~vLDlGcG~G~----~~~~la~~--~----~~v~~vD~s~-----------------~~~~~ 92 (204)
T 3njr_A 45 ALTLAALAPRRG-----ELLWDIGGGSGS----VSVEWCLA--G----GRAITIEPRA-----------------DRIEN 92 (204)
T ss_dssp HHHHHHHCCCTT-----CEEEEETCTTCH----HHHHHHHT--T----CEEEEEESCH-----------------HHHHH
T ss_pred HHHHHhcCCCCC-----CEEEEecCCCCH----HHHHHHHc--C----CEEEEEeCCH-----------------HHHHH
Confidence 345666654444 689999999884 44556666 2 5899998753 23344
Q ss_pred HHHHHHhcCce--EEEEEEecCCCCC-CccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 351 LLGFAKSMNIN--LQINRLESHPLQD-LSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 351 L~~fA~~lgVp--FeF~~V~~~~le~-L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
..+.++.+|++ ++|..-. ..+ +.. ...=++|+++..+ + .. +|+.+ +.|+|...+++.
T Consensus 93 a~~~~~~~g~~~~v~~~~~d---~~~~~~~----~~~~D~v~~~~~~----------~-~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 93 IQKNIDTYGLSPRMRAVQGT---APAALAD----LPLPEAVFIGGGG----------S-QA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp HHHHHHHTTCTTTEEEEESC---TTGGGTT----SCCCSEEEECSCC----------C-HH-HHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHcCCCCCEEEEeCc---hhhhccc----CCCCCEEEECCcc----------c-HH-HHHHHHHhcCCCcEEEEE
Confidence 45556677776 5554332 222 111 1122455544311 2 23 66665 559999877764
Q ss_pred c
Q 008559 427 N 427 (561)
Q Consensus 427 ~ 427 (561)
.
T Consensus 154 ~ 154 (204)
T 3njr_A 154 A 154 (204)
T ss_dssp E
T ss_pred e
Confidence 3
No 124
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=66.89 E-value=32 Score=32.59 Aligned_cols=30 Identities=27% Similarity=0.521 Sum_probs=22.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|. +...|+.+ | .++|||+..
T Consensus 56 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~s 85 (260)
T 2avn_A 56 CRVLDLGGGTGK----WSLFLQER--G----FEVVLVDPS 85 (260)
T ss_dssp CEEEEETCTTCH----HHHHHHTT--T----CEEEEEESC
T ss_pred CeEEEeCCCcCH----HHHHHHHc--C----CeEEEEeCC
Confidence 689999999985 45566665 2 489999874
No 125
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=66.37 E-value=13 Score=32.83 Aligned_cols=104 Identities=8% Similarity=0.084 Sum_probs=58.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-.|+|+|.|.|. +...|+.++ .-++|||+... +.-+...+.++..|++ ++|.
T Consensus 33 ~~vLDlGcG~G~----~~~~l~~~~-----~~~v~~vD~~~-----------------~~~~~a~~~~~~~~~~~~~~~~ 86 (177)
T 2esr_A 33 GRVLDLFAGSGG----LAIEAVSRG-----MSAAVLVEKNR-----------------KAQAIIQDNIIMTKAENRFTLL 86 (177)
T ss_dssp CEEEEETCTTCH----HHHHHHHTT-----CCEEEEECCCH-----------------HHHHHHHHHHHTTTCGGGEEEE
T ss_pred CeEEEeCCCCCH----HHHHHHHcC-----CCEEEEEECCH-----------------HHHHHHHHHHHHcCCCCceEEE
Confidence 579999999985 334456652 36899998743 2334444555666765 4443
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH---HhcCCCEEEEEeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL---RSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I---R~L~PkvVvlvE~ead 430 (561)
.. ++.+..+. +. ..=+.|+.|..|.. .....+++.+ +-|+|..+++++....
T Consensus 87 --~~-d~~~~~~~-~~-~~fD~i~~~~~~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 87 --KM-EAERAIDC-LT-GRFDLVFLDPPYAK--------ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp --CS-CHHHHHHH-BC-SCEEEEEECCSSHH--------HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred --EC-cHHHhHHh-hc-CCCCEEEECCCCCc--------chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 32 22221000 00 11245666655421 1234566666 6799999988877665
No 126
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=64.12 E-value=50 Score=32.68 Aligned_cols=45 Identities=13% Similarity=0.201 Sum_probs=29.1
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
..|++.+.-.+. -+|+|+|.|.|. +...|+.+ ++. ..++|||+..
T Consensus 65 ~~l~~~l~~~~~-----~~VLDiGcG~G~----~~~~la~~--~~~-~~~v~gvD~s 109 (317)
T 1dl5_A 65 ALFMEWVGLDKG-----MRVLEIGGGTGY----NAAVMSRV--VGE-KGLVVSVEYS 109 (317)
T ss_dssp HHHHHHTTCCTT-----CEEEEECCTTSH----HHHHHHHH--HCT-TCEEEEEESC
T ss_pred HHHHHhcCCCCc-----CEEEEecCCchH----HHHHHHHh--cCC-CCEEEEEECC
Confidence 345555544444 689999999884 44555554 222 3689999875
No 127
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=63.95 E-value=56 Score=29.48 Aligned_cols=106 Identities=13% Similarity=0.182 Sum_probs=56.3
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHH
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQL 351 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL 351 (561)
.+++.+.-.+. -+|+|+|.|.|.. ...|+.+ + -++|+|+.... .-+..
T Consensus 68 ~~~~~l~~~~~-----~~vLdiG~G~G~~----~~~la~~--~----~~v~~vD~~~~-----------------~~~~a 115 (210)
T 3lbf_A 68 RMTELLELTPQ-----SRVLEIGTGSGYQ----TAILAHL--V----QHVCSVERIKG-----------------LQWQA 115 (210)
T ss_dssp HHHHHTTCCTT-----CEEEEECCTTSHH----HHHHHHH--S----SEEEEEESCHH-----------------HHHHH
T ss_pred HHHHhcCCCCC-----CEEEEEcCCCCHH----HHHHHHh--C----CEEEEEecCHH-----------------HHHHH
Confidence 34555544444 7899999998863 3344444 2 48899987532 22333
Q ss_pred HHHHHhcCce-EEEEEEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEec
Q 008559 352 LGFAKSMNIN-LQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSEN 427 (561)
Q Consensus 352 ~~fA~~lgVp-FeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE~ 427 (561)
.+.++..|++ ++|..-. +.+.... -..=+.|+++ ..+|++.+ ...+.|+|...+++.-
T Consensus 116 ~~~~~~~~~~~v~~~~~d---~~~~~~~---~~~~D~i~~~--~~~~~~~~----------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 116 RRRLKNLDLHNVSTRHGD---GWQGWQA---RAPFDAIIVT--AAPPEIPT----------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp HHHHHHTTCCSEEEEESC---GGGCCGG---GCCEEEEEES--SBCSSCCT----------HHHHTEEEEEEEEEEE
T ss_pred HHHHHHcCCCceEEEECC---cccCCcc---CCCccEEEEc--cchhhhhH----------HHHHhcccCcEEEEEE
Confidence 3444455654 4443322 2111111 1111344444 45677763 3567789987666543
No 128
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=63.57 E-value=45 Score=30.01 Aligned_cols=98 Identities=11% Similarity=0.193 Sum_probs=54.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-+|+|+|.|.|.--..|.+. . | ..++|+|+... +.-..+.+.++..|++ ++|..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~----~---~-~~~v~~vD~s~-----------------~~~~~a~~~~~~~~~~~v~~~~ 121 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIV----R---P-EAHFTLLDSLG-----------------KRVRFLRQVQHELKLENIEPVQ 121 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHH----C---T-TSEEEEEESCH-----------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHH----C---C-CCEEEEEeCCH-----------------HHHHHHHHHHHHcCCCCeEEEe
Confidence 58999999999754444432 2 2 36899998743 2334444555566764 55543
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEecc
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENN 428 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~e 428 (561)
. +++++.+. ..=+.|+.|. + .....+|+.+ +.|+|..+++++..
T Consensus 122 ~---d~~~~~~~----~~~D~i~~~~------~-----~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 122 S---RVEEFPSE----PPFDGVISRA------F-----ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp C---CTTTSCCC----SCEEEEECSC------S-----SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred c---chhhCCcc----CCcCEEEEec------c-----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 33333211 1112333221 1 1345667666 55899998888743
No 129
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=63.29 E-value=20 Score=33.65 Aligned_cols=42 Identities=17% Similarity=0.159 Sum_probs=24.6
Q ss_pred CCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEec
Q 008559 385 EETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSEN 427 (561)
Q Consensus 385 ~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ 427 (561)
+..=+|-|.+.||++.... .....+|+.+ +-|+|..++++..
T Consensus 156 ~~fD~v~~~~~l~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDL-PAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp CCEEEEEEESCHHHHCSSH-HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCccEEEEhhhhhhhcCCh-HHHHHHHHHHHhhCCCCcEEEEEe
Confidence 3343444567788665321 2345566665 5689997776544
No 130
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=63.05 E-value=35 Score=33.56 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=60.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-.|+|+|.|.|. +.-.|+.+ | ..++|||+.+.. .-....+-++.+|+. ++|.
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~-~~~v~~vDis~~-----------------al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----S-DAIVFATDVSSK-----------------AVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----S-SCEEEEEESCHH-----------------HHHHHHHHHHHTTCTTSEEEE
T ss_pred CEEEEEeCchhH----HHHHHHHC----C-CCEEEEEECCHH-----------------HHHHHHHHHHHcCCCCceEEE
Confidence 679999999994 44455555 2 479999987532 233344445666765 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeecccc--ccCC----C-------CCchHHHHHHHH-HhcCCCEEEEEeccCC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLH--HLNH----S-------TPDERTEFLRVL-RSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH--~L~~----e-------s~~~r~~~L~~I-R~L~PkvVvlvE~ead 430 (561)
.- ++.+.-.. ...+-+.|+.|-.+.-. +|.. + ..+..+.+-+.+ +.++|..++++|...+
T Consensus 179 ~~---D~~~~~~~--~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 179 KG---EFLEPFKE--KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp ES---STTGGGGG--GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EC---cchhhccc--ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 33 23221111 11111577777443211 1111 1 012223344445 6789999999886554
No 131
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=62.22 E-value=19 Score=33.14 Aligned_cols=104 Identities=20% Similarity=0.211 Sum_probs=56.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc-eEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI-NLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV-pFeF~~ 366 (561)
-+|+|+|.|.|.-- ..|+.+ |. -+||+|+.... .-+...+-++..|+ ..+|..
T Consensus 56 ~~vLDlgcG~G~~~----~~l~~~--~~---~~V~~vD~s~~-----------------~l~~a~~~~~~~~~~~v~~~~ 109 (202)
T 2fpo_A 56 AQCLDCFAGSGALG----LEALSR--YA---AGATLIEMDRA-----------------VSQQLIKNLATLKAGNARVVN 109 (202)
T ss_dssp CEEEETTCTTCHHH----HHHHHT--TC---SEEEEECSCHH-----------------HHHHHHHHHHHTTCCSEEEEC
T ss_pred CeEEEeCCCcCHHH----HHHHhc--CC---CEEEEEECCHH-----------------HHHHHHHHHHHcCCCcEEEEE
Confidence 67999999998532 223333 21 38999987532 23334444555665 344432
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHh---cCCCEEEEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRS---LEPKGVILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~---L~PkvVvlvE~ead 430 (561)
. ++.++.+. .-..=+.|++|..|. . .....+|+.+++ |+|..+++++....
T Consensus 110 --~-D~~~~~~~--~~~~fD~V~~~~p~~---~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 110 --S-NAMSFLAQ--KGTPHNIVFVDPPFR---R-----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp --S-CHHHHHSS--CCCCEEEEEECCSSS---T-----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred --C-CHHHHHhh--cCCCCCEEEECCCCC---C-----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 2 22211010 001114566665533 1 234567888776 99998888776554
No 132
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=61.91 E-value=46 Score=30.83 Aligned_cols=33 Identities=12% Similarity=0.301 Sum_probs=23.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-.|+|+|.|.|. ++..||.+. | ..+++||+...
T Consensus 40 ~~vLDiGcG~G~----~~~~la~~~---p-~~~v~giD~s~ 72 (213)
T 2fca_A 40 PIHIEVGTGKGQ----FISGMAKQN---P-DINYIGIELFK 72 (213)
T ss_dssp CEEEEECCTTSH----HHHHHHHHC---T-TSEEEEECSCH
T ss_pred ceEEEEecCCCH----HHHHHHHHC---C-CCCEEEEEech
Confidence 569999999985 344556553 3 47999998753
No 133
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=60.88 E-value=14 Score=32.06 Aligned_cols=30 Identities=13% Similarity=0.027 Sum_probs=21.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+.+ |+ . +|||+..
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~--~--v~~vD~~ 72 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW--E--AVLVEKD 72 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC--E--EEEECCC
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC--e--EEEEeCC
Confidence 679999999994 45556665 32 3 9999875
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=60.75 E-value=57 Score=29.59 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=27.9
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.+++.+.-.+. -+|+|+|.|.|.--..|.+.+ | | ..++|+|+..
T Consensus 68 ~~~~~~~~~~~-----~~vLdiG~G~G~~~~~l~~~~-----~-~-~~~v~~vD~~ 111 (215)
T 2yxe_A 68 MMCELLDLKPG-----MKVLEIGTGCGYHAAVTAEIV-----G-E-DGLVVSIERI 111 (215)
T ss_dssp HHHHHTTCCTT-----CEEEEECCTTSHHHHHHHHHH-----C-T-TSEEEEEESC
T ss_pred HHHHhhCCCCC-----CEEEEECCCccHHHHHHHHHh-----C-C-CCEEEEEeCC
Confidence 44555543333 689999999886544444433 2 2 4689999875
No 135
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=56.14 E-value=40 Score=29.86 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=22.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-+|+|+|.|.|. +...|+.+ ..++|||+...
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~------~~~v~~vD~s~ 54 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL------SKKVYAFDVQE 54 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT------SSEEEEEESCH
T ss_pred CEEEEEcCCCCH----HHHHHHHh------CCEEEEEECCH
Confidence 579999999985 33456665 25899998753
No 136
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=56.14 E-value=71 Score=29.52 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=52.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|.- ...|+.+- | ..+||+|+... +.-+...+.++..|+. ++|.
T Consensus 56 ~~vLdiG~G~G~~----~~~la~~~---~-~~~v~~vD~~~-----------------~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 56 ARILEIGTAIGYS----AIRMAQAL---P-EATIVSIERDE-----------------RRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp SEEEEECCTTSHH----HHHHHHHC---T-TCEEEEECCCH-----------------HHHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEecCCCcHH----HHHHHHHC---C-CCEEEEEECCH-----------------HHHHHHHHHHHHcCCCCcEEEE
Confidence 5899999998853 33444432 2 37899998743 2233444445555653 4443
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEec
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSEN 427 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ 427 (561)
.. ...+.-+....-..=+.|+++... + ....+|+. .+.|+|..+++++.
T Consensus 111 --~~-d~~~~~~~~~~~~~fD~I~~~~~~--~--------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 111 --FG-DALQLGEKLELYPLFDVLFIDAAK--G--------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp --CS-CGGGSHHHHTTSCCEEEEEEEGGG--S--------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred --EC-CHHHHHHhcccCCCccEEEECCCH--H--------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 22 222211110000112455555331 1 23345544 56799999988863
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=54.91 E-value=81 Score=29.88 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=58.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...|+.+. + . +||||+... +.-+...+-++..++.=.+..+
T Consensus 51 ~~vLDlG~G~G~----~~~~la~~~---~-~-~v~gvDi~~-----------------~~~~~a~~n~~~~~~~~~v~~~ 104 (259)
T 3lpm_A 51 GKIIDLCSGNGI----IPLLLSTRT---K-A-KIVGVEIQE-----------------RLADMAKRSVAYNQLEDQIEII 104 (259)
T ss_dssp CEEEETTCTTTH----HHHHHHTTC---C-C-EEEEECCSH-----------------HHHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEcCCchhH----HHHHHHHhc---C-C-cEEEEECCH-----------------HHHHHHHHHHHHCCCcccEEEE
Confidence 689999999994 555677763 2 2 899998743 2233334444555665223333
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeecccc---ccCCC----------CCchHHHHHHHH-HhcCCCEEEEEecc
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLH---HLNHS----------TPDERTEFLRVL-RSLEPKGVILSENN 428 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH---~L~~e----------s~~~r~~~L~~I-R~L~PkvVvlvE~e 428 (561)
.. ++.++.. .+.-..=+.|+.|-.|.-. .+... .......+|+.+ +-|+|...+++...
T Consensus 105 ~~-D~~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 105 EY-DLKKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp CS-CGGGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EC-cHHHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 33 3333221 1111222577777665422 22110 002235566665 55899988887543
No 138
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=54.84 E-value=46 Score=32.65 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=22.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|.--..|. .+ | -++|||+..
T Consensus 30 ~~VLDiG~G~G~lt~~L~----~~--~----~~v~~vD~~ 59 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLL----EK--A----KKVVACELD 59 (285)
T ss_dssp CEEEEECCTTSTTHHHHH----HH--S----SEEEEEESC
T ss_pred CEEEEEcCcccHHHHHHH----hh--C----CEEEEEECC
Confidence 689999999998655444 33 2 279999874
No 139
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=54.67 E-value=19 Score=34.16 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=59.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+++. | -++|+|+... +.-++..+.++..+....|...
T Consensus 62 ~rVLdiG~G~G~----~~~~~~~~~---~--~~v~~id~~~-----------------~~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 62 GRVLEVGFGMAI----AASKVQEAP---I--DEHWIIECND-----------------GVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp EEEEEECCTTSH----HHHHHTTSC---E--EEEEEEECCH-----------------HHHHHHHHHGGGCSSEEEEEES
T ss_pred CeEEEECCCccH----HHHHHHHhC---C--cEEEEEeCCH-----------------HHHHHHHHHHhhCCCceEEEee
Confidence 689999999983 344566542 3 3789998742 3556777778888877766543
Q ss_pred ecCCCCCCccccccCCCC--CEEEEE---eeccccccCCCCCchHHHHHHHH-HhcCCCEEEEE
Q 008559 368 ESHPLQDLSSQMVSTSPE--ETLIVC---TQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILS 425 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~--EaLaVN---~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlv 425 (561)
. ++++... +.++ +.+.+. +.+.++|+. ....+|+-+ |-|+|..+.+.
T Consensus 116 ~---a~~~~~~---~~~~~FD~i~~D~~~~~~~~~~~~-----~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 116 L---WEDVAPT---LPDGHFDGILYDTYPLSEETWHTH-----QFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp C---HHHHGGG---SCTTCEEEEEECCCCCBGGGTTTH-----HHHHHHHTHHHHEEEEEEEEE
T ss_pred h---HHhhccc---ccccCCceEEEeeeecccchhhhc-----chhhhhhhhhheeCCCCEEEE
Confidence 2 2222111 1122 233333 233444443 356677754 66999987653
No 140
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=54.36 E-value=59 Score=31.68 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=27.9
Q ss_pred HHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 273 ILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 273 ILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
|++++.-... -+|+|+|.|.|. |-..|+.+. -++|+|+..
T Consensus 21 iv~~~~~~~~-----~~VLEIG~G~G~----lt~~La~~~------~~V~avEid 60 (255)
T 3tqs_A 21 IVSAIHPQKT-----DTLVEIGPGRGA----LTDYLLTEC------DNLALVEID 60 (255)
T ss_dssp HHHHHCCCTT-----CEEEEECCTTTT----THHHHTTTS------SEEEEEECC
T ss_pred HHHhcCCCCc-----CEEEEEcccccH----HHHHHHHhC------CEEEEEECC
Confidence 4455543333 689999999997 556777662 378999874
No 141
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=54.34 E-value=1.7e+02 Score=30.66 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=57.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+|.|.|. +...||.+ + -+++||+.... .-+...+-|+..|+..+|..-
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~--~----~~V~gvD~s~~-----------------ai~~A~~n~~~ngl~v~~~~~ 344 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR--G----FNVKGFDSNEF-----------------AIEMARRNVEINNVDAEFEVA 344 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT--T----CEEEEEESCHH-----------------HHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEeeccchH----HHHHHHHc--C----CEEEEEECCHH-----------------HHHHHHHHHHHcCCcEEEEEC
Confidence 579999999985 33456664 2 38999987532 223333445556776444433
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE 426 (561)
+++++... .=++|++|-... .....+++.++.|+|+.++.+.
T Consensus 345 ---d~~~~~~~-----~fD~Vv~dPPr~---------g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 345 ---SDREVSVK-----GFDTVIVDPPRA---------GLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp ---CTTTCCCT-----TCSEEEECCCTT---------CSCHHHHHHHHHHCCSEEEEEE
T ss_pred ---ChHHcCcc-----CCCEEEEcCCcc---------chHHHHHHHHHhcCCCcEEEEE
Confidence 33433222 234777663311 1224689999999999988875
No 142
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=53.73 E-value=1.2e+02 Score=27.06 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=51.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+ | + -++|||+.... .-+.+.+-++..|+.++|..
T Consensus 51 ~~vlD~g~G~G~----~~~~l~~~--~-~--~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~~~~~- 103 (207)
T 1wy7_A 51 KVVADLGAGTGV----LSYGALLL--G-A--KEVICVEVDKE-----------------AVDVLIENLGEFKGKFKVFI- 103 (207)
T ss_dssp CEEEEETCTTCH----HHHHHHHT--T-C--SEEEEEESCHH-----------------HHHHHHHHTGGGTTSEEEEE-
T ss_pred CEEEEeeCCCCH----HHHHHHHc--C-C--CEEEEEECCHH-----------------HHHHHHHHHHHcCCCEEEEE-
Confidence 689999999997 45556665 2 1 38999987432 23344444555666544443
Q ss_pred ecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcC
Q 008559 368 ESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLE 418 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~ 418 (561)
. ++.++. ..=+.|+.|..|.. ... .....+|+.+.++-
T Consensus 104 -~-d~~~~~------~~~D~v~~~~p~~~--~~~---~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 104 -G-DVSEFN------SRVDIVIMNPPFGS--QRK---HADRPFLLKAFEIS 141 (207)
T ss_dssp -S-CGGGCC------CCCSEEEECCCCSS--SST---TTTHHHHHHHHHHC
T ss_pred -C-chHHcC------CCCCEEEEcCCCcc--ccC---CchHHHHHHHHHhc
Confidence 3 333332 12358888877543 221 22345676665554
No 143
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=53.19 E-value=24 Score=35.03 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=45.2
Q ss_pred HHHHhhccCCCCCchh-HhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 251 SLLNFYDKSPWFAFPN-NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 251 A~~~f~e~sP~~kfah-ftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
.+..-|.+.|=.+|+. |..|..|++.+-..-. -... +|+|+|.|.|. |-..|+.+. -++|+|+.+.
T Consensus 12 ~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~-~~~~-~VLEIG~G~G~----lt~~L~~~~------~~V~avEid~ 78 (271)
T 3fut_A 12 ALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTG-PVFEVGPGLGA----LTRALLEAG------AEVTAIEKDL 78 (271)
T ss_dssp HHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHC-CCCS-CEEEECCTTSH----HHHHHHHTT------CCEEEEESCG
T ss_pred HHHHhcCCCccccCCccccCCHHHHHHHHHhcC-CCCC-eEEEEeCchHH----HHHHHHHcC------CEEEEEECCH
Confidence 3444566677777765 6678777777654433 2234 89999999985 667777762 3689998754
No 144
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=52.99 E-value=74 Score=30.47 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=22.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.+|+|+|.|.|. +...|+.+- | ..++|+|+.+
T Consensus 111 ~~vLDlG~GsG~----~~~~la~~~---~-~~~v~~vD~s 142 (276)
T 2b3t_A 111 CRILDLGTGTGA----IALALASER---P-DCEIIAVDRM 142 (276)
T ss_dssp CEEEEETCTTSH----HHHHHHHHC---T-TSEEEEECSS
T ss_pred CEEEEecCCccH----HHHHHHHhC---C-CCEEEEEECC
Confidence 689999999985 333455432 2 4789999875
No 145
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=52.81 E-value=1.3e+02 Score=27.22 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=57.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc---eEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI---NLQI 364 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV---pFeF 364 (561)
-.|+|+|.|.|.- ...++.+ | .-++|+|+.... .-+...+-++..|+ ..+|
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~--~---~~~v~gvD~s~~-----------------~l~~a~~~~~~~~~~~~~v~~ 108 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR--Q---AKKVTFLELDKT-----------------VANQLKKNLQTLKCSSEQAEV 108 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT--T---CSEEEEECSCHH-----------------HHHHHHHHHHHTTCCTTTEEE
T ss_pred CeEEEcCCccCHH----HHHHHHc--c---CCEEEEEECCHH-----------------HHHHHHHHHHHhCCCccceEE
Confidence 5799999999842 2223333 2 148999987532 22333444455665 3444
Q ss_pred EEEecCCCCCCccccccCCC-CCEEEEEeeccccccCCCCCchHHHHHHHHHh---cCCCEEEEEeccCC
Q 008559 365 NRLESHPLQDLSSQMVSTSP-EETLIVCTQFRLHHLNHSTPDERTEFLRVLRS---LEPKGVILSENNMD 430 (561)
Q Consensus 365 ~~V~~~~le~L~~~~L~~~~-~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~---L~PkvVvlvE~ead 430 (561)
..-. ..++... +.-.. =++|+.|..| | . .....+|+.+.+ |+|..+++++....
T Consensus 109 ~~~d---~~~~~~~-~~~~~~fD~I~~~~~~--~-~-----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 109 INQS---SLDFLKQ-PQNQPHFDVVFLDPPF--H-F-----NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECSC---HHHHTTS-CCSSCCEEEEEECCCS--S-S-----CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECC---HHHHHHh-hccCCCCCEEEECCCC--C-C-----ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3322 1111110 00111 1355555543 2 1 345678888865 99999988877665
No 146
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=51.57 E-value=57 Score=30.55 Aligned_cols=98 Identities=10% Similarity=0.168 Sum_probs=54.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-+|+|+|.|.|.-= ..|+.+. | ..++|+|+... +.-..+.+.++..|++ ++|.
T Consensus 72 ~~vLDiG~G~G~~~----~~la~~~---~-~~~v~~vD~s~-----------------~~~~~a~~~~~~~~~~~v~~~- 125 (240)
T 1xdz_A 72 NTICDVGAGAGFPS----LPIKICF---P-HLHVTIVDSLN-----------------KRITFLEKLSEALQLENTTFC- 125 (240)
T ss_dssp CEEEEECSSSCTTH----HHHHHHC---T-TCEEEEEESCH-----------------HHHHHHHHHHHHHTCSSEEEE-
T ss_pred CEEEEecCCCCHHH----HHHHHhC---C-CCEEEEEeCCH-----------------HHHHHHHHHHHHcCCCCEEEE-
Confidence 68999999999632 2233321 2 37899998753 2334445556666764 4443
Q ss_pred EecCCCCCCccccccCCCC--CEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 367 LESHPLQDLSSQMVSTSPE--ETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~--EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. +++++... ... ++ +.|+.+. + .....+|+.+ +-|+|..+++..
T Consensus 126 -~~-d~~~~~~~-~~~-~~~fD~V~~~~------~-----~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 126 -HD-RAETFGQR-KDV-RESYDIVTARA------V-----ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -ES-CHHHHTTC-TTT-TTCEEEEEEEC------C-----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -ec-cHHHhccc-ccc-cCCccEEEEec------c-----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 32 33332210 000 11 2333222 1 2356788877 679999888765
No 147
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=50.85 E-value=32 Score=33.09 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=55.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-+|+|+|.|-|.--..| |.+. | ..+||+|+... +.-..+.+-++.+|+. .+|.
T Consensus 82 ~~vLDiG~G~G~~~i~l----a~~~---~-~~~v~~vD~s~-----------------~~~~~a~~~~~~~~l~~v~~~- 135 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPL----KIVR---P-ELELVLVDATR-----------------KKVAFVERAIEVLGLKGARAL- 135 (249)
T ss_dssp CEEEEETCTTTTTHHHH----HHHC---T-TCEEEEEESCH-----------------HHHHHHHHHHHHHTCSSEEEE-
T ss_pred CEEEEEcCCCCHHHHHH----HHHC---C-CCEEEEEECCH-----------------HHHHHHHHHHHHhCCCceEEE-
Confidence 68999999999754333 2221 2 48999998753 2334555566667774 4443
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
.. +++++......-..=++|+.+. + .+...+++.+ +-|+|...+++-
T Consensus 136 -~~-d~~~~~~~~~~~~~fD~I~s~a------~-----~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 136 -WG-RAEVLAREAGHREAYARAVARA------V-----APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp -EC-CHHHHTTSTTTTTCEEEEEEES------S-----CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -EC-cHHHhhcccccCCCceEEEECC------c-----CCHHHHHHHHHHHcCCCeEEEEE
Confidence 33 3333322100001112343332 1 2346677766 568999876653
No 148
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=50.06 E-value=65 Score=28.74 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=22.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+.+ |+ . ++|+|+..
T Consensus 44 ~~vLdiGcG~G~----~~~~l~~~--~~--~-~v~~~D~s 74 (215)
T 2pxx_A 44 DRILVLGCGNSA----LSYELFLG--GF--P-NVTSVDYS 74 (215)
T ss_dssp CCEEEETCTTCS----HHHHHHHT--TC--C-CEEEEESC
T ss_pred CeEEEECCCCcH----HHHHHHHc--CC--C-cEEEEeCC
Confidence 689999999985 33455554 32 2 89999875
No 149
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=49.79 E-value=78 Score=30.14 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=26.4
Q ss_pred CCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 385 EETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 385 ~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
+..=+|-|.+.|||+... ......+|+.| |-|+|...++.-
T Consensus 155 ~~fD~V~~~~~l~~i~~~-~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 155 PLADCVLTLLAMECACCS-LDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp CCEEEEEEESCHHHHCSS-HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCC-HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 356677778899997432 12344566665 459999776653
No 150
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=49.76 E-value=55 Score=29.90 Aligned_cols=104 Identities=12% Similarity=0.134 Sum_probs=55.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|.- ...|+.+- |+ ..+||+|+.... .-+...+.++..|+. ++|.
T Consensus 66 ~~vLdiG~G~G~~----~~~la~~~--~~-~~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~~v~~~ 121 (225)
T 3tr6_A 66 KKVIDIGTFTGYS----AIAMGLAL--PK-DGTLITCDVDEK-----------------STALAKEYWEKAGLSDKIGLR 121 (225)
T ss_dssp SEEEEECCTTSHH----HHHHHTTC--CT-TCEEEEEESCHH-----------------HHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEeCCcchHH----HHHHHHhC--CC-CCEEEEEeCCHH-----------------HHHHHHHHHHHCCCCCceEEE
Confidence 5899999999853 33455442 22 479999987532 234444555566664 5554
Q ss_pred EEecCCCCCCccccccC----CCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccC
Q 008559 366 RLESHPLQDLSSQMVST----SPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNM 429 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~----~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ea 429 (561)
.-.. .+.+. . +.- ..=+.|+++.. ......+|+.+ +.|+|..+++++.-.
T Consensus 122 ~~d~--~~~~~-~-~~~~~~~~~fD~v~~~~~----------~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 122 LSPA--KDTLA-E-LIHAGQAWQYDLIYIDAD----------KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp ESCH--HHHHH-H-HHTTTCTTCEEEEEECSC----------GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred eCCH--HHHHH-H-hhhccCCCCccEEEECCC----------HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3321 11111 0 100 11134443321 12234555555 779999999886544
No 151
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=49.74 E-value=92 Score=28.37 Aligned_cols=105 Identities=18% Similarity=0.247 Sum_probs=55.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|.- ...|+.+- |+ ..+||+|+... +.-....+.++..|+. ++|.
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~-~~~v~~vD~~~-----------------~~~~~a~~~~~~~~~~~~v~~~ 115 (223)
T 3duw_A 60 RNILEIGTLGGYS----TIWLARGL--SS-GGRVVTLEASE-----------------KHADIARSNIERANLNDRVEVR 115 (223)
T ss_dssp SEEEEECCTTSHH----HHHHHTTC--CS-SCEEEEEESCH-----------------HHHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEecCCccHH----HHHHHHhC--CC-CCEEEEEECCH-----------------HHHHHHHHHHHHcCCCCcEEEE
Confidence 6899999998843 33445442 22 46999998743 2233444455556663 4544
Q ss_pred EEecCCCCCCcccccc---CCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEeccCC
Q 008559 366 RLESHPLQDLSSQMVS---TSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~---~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ead 430 (561)
.-.. .+.+. . +. ...=+.|+++.. ......+|+. .+.|+|..+++++.-..
T Consensus 116 ~~d~--~~~~~-~-~~~~~~~~fD~v~~d~~----------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 116 TGLA--LDSLQ-Q-IENEKYEPFDFIFIDAD----------KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp ESCH--HHHHH-H-HHHTTCCCCSEEEECSC----------GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred EcCH--HHHHH-H-HHhcCCCCcCEEEEcCC----------cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3321 11110 0 10 012235554432 1233455555 47799999998875444
No 152
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=49.13 E-value=37 Score=32.57 Aligned_cols=49 Identities=22% Similarity=0.267 Sum_probs=30.0
Q ss_pred HhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 267 NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 267 ftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
.-+.+.+++++...-. ..-+|+|+|.|.|. |...++.+ |+ +++||+...
T Consensus 104 ~~tt~~~~~~l~~~~~---~~~~VLDiGcG~G~----l~~~la~~--g~----~v~gvDi~~ 152 (254)
T 2nxc_A 104 HETTRLALKALARHLR---PGDKVLDLGTGSGV----LAIAAEKL--GG----KALGVDIDP 152 (254)
T ss_dssp SHHHHHHHHHHHHHCC---TTCEEEEETCTTSH----HHHHHHHT--TC----EEEEEESCG
T ss_pred CHHHHHHHHHHHHhcC---CCCEEEEecCCCcH----HHHHHHHh--CC----eEEEEECCH
Confidence 3344455566543211 12689999999985 44456654 32 899998754
No 153
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=48.45 E-value=27 Score=30.80 Aligned_cols=105 Identities=11% Similarity=0.071 Sum_probs=54.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.|.|.- ...++.+. .-++|+|+.... .-+...+-++..++. .+|.
T Consensus 46 ~~vLD~GcG~G~~----~~~~~~~~-----~~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~~~~~~ 99 (187)
T 2fhp_A 46 GMALDLYSGSGGL----AIEAVSRG-----MDKSICIEKNFA-----------------ALKVIKENIAITKEPEKFEVR 99 (187)
T ss_dssp CEEEETTCTTCHH----HHHHHHTT-----CSEEEEEESCHH-----------------HHHHHHHHHHHHTCGGGEEEE
T ss_pred CCEEEeCCccCHH----HHHHHHcC-----CCEEEEEECCHH-----------------HHHHHHHHHHHhCCCcceEEE
Confidence 6899999999863 23344442 368999987532 223333334444553 5554
Q ss_pred EEecCCCCCCcccccc--CCCCCEEEEEeeccccccCCCCCchHHHHHHHH---HhcCCCEEEEEeccCC
Q 008559 366 RLESHPLQDLSSQMVS--TSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL---RSLEPKGVILSENNMD 430 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~--~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I---R~L~PkvVvlvE~ead 430 (561)
.-. +.++... +. -..=+.|+.|..|..+ ....+++.+ +-|+|..+++++....
T Consensus 100 ~~d---~~~~~~~-~~~~~~~fD~i~~~~~~~~~--------~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 100 KMD---ANRALEQ-FYEEKLQFDLVLLDPPYAKQ--------EIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp ESC---HHHHHHH-HHHTTCCEEEEEECCCGGGC--------CHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECc---HHHHHHH-HHhcCCCCCEEEECCCCCch--------hHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 332 2221110 10 1112466666554311 123444444 5689999888876555
No 154
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=48.08 E-value=1.5e+02 Score=30.92 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=56.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-+|+|+|.|.|.-= ..||.+ .-+++||+.... .-+...+-|+..|++ .+|..
T Consensus 288 ~~VLDlgcG~G~~~----~~la~~------~~~V~gvD~s~~-----------------al~~A~~n~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 288 DRVLDLFCGMGNFT----LPLATQ------AASVVGVEGVPA-----------------LVEKGQQNARLNGLQNVTFYH 340 (433)
T ss_dssp CEEEEESCTTTTTH----HHHHTT------SSEEEEEESCHH-----------------HHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEECCCCCCHHH----HHHHhh------CCEEEEEeCCHH-----------------HHHHHHHHHHHcCCCceEEEE
Confidence 57999999998643 345555 157999987532 223333445556664 55544
Q ss_pred EecCCCCC-CccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEEe
Q 008559 367 LESHPLQD-LSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~-L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlvE 426 (561)
- ++++ +....+.-..=++|++|-... ....+++.|..++|+.++.+.
T Consensus 341 ~---d~~~~l~~~~~~~~~fD~Vv~dPPr~----------g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 341 E---NLEEDVTKQPWAKNGFDKVLLDPARA----------GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp C---CTTSCCSSSGGGTTCCSEEEECCCTT----------CCHHHHHHHHHHCCSEEEEEE
T ss_pred C---CHHHHhhhhhhhcCCCCEEEECCCCc----------cHHHHHHHHHhcCCCeEEEEE
Confidence 3 3333 211011112225777663211 124688999999999988764
No 155
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=46.76 E-value=98 Score=28.60 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=53.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-+|+|+|.|.|. +...|+.+- | | .-+++||+... +.-+.+.+.|+.. -..+|.
T Consensus 79 ~~vLDlG~G~G~----~~~~la~~~-g-~-~~~v~gvD~s~-----------------~~i~~~~~~a~~~-~~v~~~-- 131 (233)
T 2ipx_A 79 AKVLYLGAASGT----TVSHVSDIV-G-P-DGLVYAVEFSH-----------------RSGRDLINLAKKR-TNIIPV-- 131 (233)
T ss_dssp CEEEEECCTTSH----HHHHHHHHH-C-T-TCEEEEECCCH-----------------HHHHHHHHHHHHC-TTEEEE--
T ss_pred CEEEEEcccCCH----HHHHHHHHh-C-C-CcEEEEEECCH-----------------HHHHHHHHHhhcc-CCeEEE--
Confidence 589999999985 444555542 2 2 35899997642 2334455666653 223332
Q ss_pred ecCCCCCCccccccCCCC--CEEEEEeeccccccCCCCCchHHHHHH-HHHhcCCCEEEEEe
Q 008559 368 ESHPLQDLSSQMVSTSPE--ETLIVCTQFRLHHLNHSTPDERTEFLR-VLRSLEPKGVILSE 426 (561)
Q Consensus 368 ~~~~le~L~~~~L~~~~~--EaLaVN~~f~LH~L~~es~~~r~~~L~-~IR~L~PkvVvlvE 426 (561)
.. ++++.. .+...++ ++|+.+.. .++....+|. ..+.|+|..++++.
T Consensus 132 ~~-d~~~~~--~~~~~~~~~D~V~~~~~---------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 132 IE-DARHPH--KYRMLIAMVDVIFADVA---------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CS-CTTCGG--GGGGGCCCEEEEEECCC---------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ec-ccCChh--hhcccCCcEEEEEEcCC---------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 22 232211 1111112 33443321 2244455565 77889999888874
No 156
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=46.52 E-value=1.2e+02 Score=29.09 Aligned_cols=100 Identities=18% Similarity=0.102 Sum_probs=54.5
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc-CceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM-NINLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l-gVpFeF~~ 366 (561)
=+|+|+|.+-|. |...|-.+.. | .-+|++|+... ...+.|.+.|+.. || +|
T Consensus 78 ~~VLDlG~GtG~-~t~~la~~v~----~--~G~V~avD~s~-----------------~~l~~l~~~a~~r~nv--~~-- 129 (232)
T 3id6_C 78 TKVLYLGAASGT-TISHVSDIIE----L--NGKAYGVEFSP-----------------RVVRELLLVAQRRPNI--FP-- 129 (232)
T ss_dssp CEEEEETCTTSH-HHHHHHHHHT----T--TSEEEEEECCH-----------------HHHHHHHHHHHHCTTE--EE--
T ss_pred CEEEEEeecCCH-HHHHHHHHhC----C--CCEEEEEECcH-----------------HHHHHHHHHhhhcCCe--EE--
Confidence 679999999998 6666555442 1 34899998742 2334566666653 43 32
Q ss_pred EecCCCCCCcc-ccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHH-hcCCCEEEEEe
Q 008559 367 LESHPLQDLSS-QMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLR-SLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~-~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR-~L~PkvVvlvE 426 (561)
+.. +...... ..+ ...=++|+++..+ ++....++..++ -|+|...+++-
T Consensus 130 i~~-Da~~~~~~~~~-~~~~D~I~~d~a~---------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 130 LLA-DARFPQSYKSV-VENVDVLYVDIAQ---------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEC-CTTCGGGTTTT-CCCEEEEEECCCC---------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEc-ccccchhhhcc-ccceEEEEecCCC---------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 222 2211111 111 1111344444221 345666777777 79999877654
No 157
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=46.05 E-value=2.4e+02 Score=29.17 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=30.0
Q ss_pred cceEEEEccccCC----CchHHHHHHHHhCC---CCCCCceEEEEecCCC
Q 008559 286 QNLHILDIGVSHG----VQWPTLLEALTRRS---GGPPPLVRLTIIAPTA 328 (561)
Q Consensus 286 ~~VHIIDfgI~~G----~QWpsLiqaLA~R~---gGpP~~LRITgI~~~~ 328 (561)
+.+.|.|||.+.| .-+-.+|+++..+. +.+||.++|..-|.|.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ 101 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPS 101 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTT
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCc
Confidence 4699999999999 34445566555432 3344579999888765
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=46.02 E-value=50 Score=31.72 Aligned_cols=115 Identities=12% Similarity=0.092 Sum_probs=58.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHh---cCce--E
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKS---MNIN--L 362 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~---lgVp--F 362 (561)
-+|+|+|.|.|. +...|+.|- | ..+||+|+.... .-+...+-++. .|+. +
T Consensus 38 ~~VLDlG~G~G~----~~l~la~~~---~-~~~v~gvDi~~~-----------------~~~~a~~n~~~~~~~~l~~~v 92 (260)
T 2ozv_A 38 CRIADLGAGAGA----AGMAVAARL---E-KAEVTLYERSQE-----------------MAEFARRSLELPDNAAFSARI 92 (260)
T ss_dssp EEEEECCSSSSH----HHHHHHHHC---T-TEEEEEEESSHH-----------------HHHHHHHHTTSGGGTTTGGGE
T ss_pred CEEEEeCChHhH----HHHHHHHhC---C-CCeEEEEECCHH-----------------HHHHHHHHHHhhhhCCCcceE
Confidence 689999999985 334555553 2 489999987432 22222233333 4554 4
Q ss_pred EEEEEecCCCCCCccc----cccCCCCCEEEEEeeccccc--cC---------CCCCchHHHHHHHH-HhcCCCEEEEEe
Q 008559 363 QINRLESHPLQDLSSQ----MVSTSPEETLIVCTQFRLHH--LN---------HSTPDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 363 eF~~V~~~~le~L~~~----~L~~~~~EaLaVN~~f~LH~--L~---------~es~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
+| +.. ++.++... .+.-..=+.|+.|-.|.... +. .+.......+|+.+ +-|+|...++++
T Consensus 93 ~~--~~~-D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 93 EV--LEA-DVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp EE--EEC-CTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EE--EeC-CHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 44 333 34433211 11112225777775554320 00 00112356677665 569999888876
Q ss_pred ccCC
Q 008559 427 NNMD 430 (561)
Q Consensus 427 ~ead 430 (561)
...+
T Consensus 170 ~~~~ 173 (260)
T 2ozv_A 170 SRPQ 173 (260)
T ss_dssp ECGG
T ss_pred EcHH
Confidence 5443
No 159
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=45.57 E-value=99 Score=28.27 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=26.3
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+.+ + .++|+|+..
T Consensus 61 ~~~~~~~~~~~-----~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~~ 101 (231)
T 1vbf_A 61 FMLDELDLHKG-----QKVLEIGTGIGY----YTALIAEI--V----DKVVSVEIN 101 (231)
T ss_dssp HHHHHTTCCTT-----CEEEEECCTTSH----HHHHHHHH--S----SEEEEEESC
T ss_pred HHHHhcCCCCC-----CEEEEEcCCCCH----HHHHHHHH--c----CEEEEEeCC
Confidence 44455543344 689999999986 33344544 1 488999874
No 160
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=44.32 E-value=87 Score=28.60 Aligned_cols=34 Identities=26% Similarity=0.200 Sum_probs=22.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-+|+|+|.+.|. +...|+..- ++ ..+||+|+...
T Consensus 71 ~~vLdiG~G~G~----~~~~la~~~--~~-~~~v~~vD~~~ 104 (229)
T 2avd_A 71 KKALDLGTFTGY----SALALALAL--PA-DGRVVTCEVDA 104 (229)
T ss_dssp CEEEEECCTTSH----HHHHHHTTS--CT-TCEEEEEESCS
T ss_pred CEEEEEcCCccH----HHHHHHHhC--CC-CCEEEEEECCH
Confidence 689999999884 334455432 22 47999998753
No 161
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=43.28 E-value=1.7e+02 Score=26.64 Aligned_cols=47 Identities=19% Similarity=0.271 Sum_probs=28.3
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
.+++.+..... ..-+|+|+|.|.|..-..|.+.+ | | ..++|+|+...
T Consensus 66 ~~l~~l~~~~~---~~~~vLDiG~G~G~~~~~la~~~-----~-~-~~~v~~vD~s~ 112 (226)
T 1i1n_A 66 YALELLFDQLH---EGAKALDVGSGSGILTACFARMV-----G-C-TGKVIGIDHIK 112 (226)
T ss_dssp HHHHHTTTTSC---TTCEEEEETCTTSHHHHHHHHHH-----C-T-TCEEEEEESCH
T ss_pred HHHHHHHhhCC---CCCEEEEEcCCcCHHHHHHHHHh-----C-C-CcEEEEEeCCH
Confidence 55666642111 12689999999986444333332 2 2 46999998753
No 162
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=43.26 E-value=1.3e+02 Score=30.43 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=52.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRL 367 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~V 367 (561)
-.|+|+| |.|.- ...|+.+ || ..++|+|+.... .-+...+.++..|+. .++.+
T Consensus 174 ~~VLDlG-G~G~~----~~~la~~--~~--~~~v~~vDi~~~-----------------~l~~a~~~~~~~g~~-~v~~~ 226 (373)
T 2qm3_A 174 KDIFVLG-DDDLT----SIALMLS--GL--PKRIAVLDIDER-----------------LTKFIEKAANEIGYE-DIEIF 226 (373)
T ss_dssp CEEEEES-CTTCH----HHHHHHH--TC--CSEEEEECSCHH-----------------HHHHHHHHHHHHTCC-CEEEE
T ss_pred CEEEEEC-CCCHH----HHHHHHh--CC--CCEEEEEECCHH-----------------HHHHHHHHHHHcCCC-CEEEE
Confidence 6899999 87762 2334443 32 379999987432 233444455556764 33444
Q ss_pred ecCCCCC-CccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCE
Q 008559 368 ESHPLQD-LSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKG 421 (561)
Q Consensus 368 ~~~~le~-L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~Pkv 421 (561)
.. ++.+ +... +. ..=++|++|..+... ....||+.+ +.|+|..
T Consensus 227 ~~-D~~~~l~~~-~~-~~fD~Vi~~~p~~~~--------~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 227 TF-DLRKPLPDY-AL-HKFDTFITDPPETLE--------AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp CC-CTTSCCCTT-TS-SCBSEEEECCCSSHH--------HHHHHHHHHHHTBCSTT
T ss_pred EC-hhhhhchhh-cc-CCccEEEECCCCchH--------HHHHHHHHHHHHcccCC
Confidence 43 3333 3210 10 122688888765432 135666665 6689965
No 163
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=43.14 E-value=1.8e+02 Score=29.33 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=22.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-+|+|+|.|-|. ...++ ||+.++ -+||||+...
T Consensus 124 ~rVLDIGcG~G~-~ta~~--lA~~~g-----a~V~gIDis~ 156 (298)
T 3fpf_A 124 ERAVFIGGGPLP-LTGIL--LSHVYG-----MRVNVVEIEP 156 (298)
T ss_dssp CEEEEECCCSSC-HHHHH--HHHTTC-----CEEEEEESSH
T ss_pred CEEEEECCCccH-HHHHH--HHHccC-----CEEEEEECCH
Confidence 689999998763 33333 455442 5899998753
No 164
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=42.59 E-value=1.8e+02 Score=27.23 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=24.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-.|+|+|.|.|. ++..|+.+ + | ..++|||+...
T Consensus 51 ~~vLDiGcG~G~----~~~~la~~--~-~-~~~v~gvD~s~ 83 (246)
T 2vdv_E 51 VTIADIGCGFGG----LMIDLSPA--F-P-EDLILGMEIRV 83 (246)
T ss_dssp EEEEEETCTTSH----HHHHHHHH--S-T-TSEEEEEESCH
T ss_pred CEEEEEcCCCCH----HHHHHHHh--C-C-CCCEEEEEcCH
Confidence 789999999986 44455554 2 2 47999998754
No 165
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=42.46 E-value=1.5e+02 Score=30.04 Aligned_cols=106 Identities=18% Similarity=0.173 Sum_probs=56.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
-.|+|+|.|.|. ++-.++.+ ++ .-+|+|++.... +-+...+-++..|+ .++|.
T Consensus 219 ~~vLD~gCGsG~----~~i~~a~~--~~--~~~v~g~Dis~~-----------------~l~~A~~n~~~~gl~~~i~~~ 273 (373)
T 3tm4_A 219 GSVLDPMCGSGT----ILIELALR--RY--SGEIIGIEKYRK-----------------HLIGAEMNALAAGVLDKIKFI 273 (373)
T ss_dssp CCEEETTCTTCH----HHHHHHHT--TC--CSCEEEEESCHH-----------------HHHHHHHHHHHTTCGGGCEEE
T ss_pred CEEEEccCcCcH----HHHHHHHh--CC--CCeEEEEeCCHH-----------------HHHHHHHHHHHcCCCCceEEE
Confidence 679999999984 45555655 22 247999987532 22333344555676 45655
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCC-C-chHHHHHHHHHh-cCCCEEEEE
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHST-P-DERTEFLRVLRS-LEPKGVILS 425 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es-~-~~r~~~L~~IR~-L~PkvVvlv 425 (561)
.-. ..++... ...=++|+.|-.|... +.... . .--..+++.+++ |++.+++++
T Consensus 274 ~~D---~~~~~~~---~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 274 QGD---ATQLSQY---VDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp ECC---GGGGGGT---CSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECC---hhhCCcc---cCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 443 2222211 1223578888777642 22111 0 112567777776 755665553
No 166
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=41.71 E-value=63 Score=31.93 Aligned_cols=30 Identities=20% Similarity=0.159 Sum_probs=22.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|.-- ..|+.+ + -++|||+..
T Consensus 44 ~~VLDiG~G~G~lt----~~La~~--~----~~v~~vDi~ 73 (299)
T 2h1r_A 44 DIVLEIGCGTGNLT----VKLLPL--A----KKVITIDID 73 (299)
T ss_dssp CEEEEECCTTSTTH----HHHTTT--S----SEEEEECSC
T ss_pred CEEEEEcCcCcHHH----HHHHhc--C----CEEEEEECC
Confidence 68999999999743 455655 2 379999874
No 167
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=40.21 E-value=76 Score=28.72 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=24.7
Q ss_pred HHHHHHhcC-ccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQD-RHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~-~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.|++.+... +. -+|+|+|.|.|.- ...|+ .++|||+..
T Consensus 57 ~~~~~l~~~~~~-----~~vLDiG~G~G~~----~~~l~---------~~v~~~D~s 95 (215)
T 2zfu_A 57 RIARDLRQRPAS-----LVVADFGCGDCRL----ASSIR---------NPVHCFDLA 95 (215)
T ss_dssp HHHHHHHTSCTT-----SCEEEETCTTCHH----HHHCC---------SCEEEEESS
T ss_pred HHHHHHhccCCC-----CeEEEECCcCCHH----HHHhh---------ccEEEEeCC
Confidence 466666532 23 6899999999862 23331 478999874
No 168
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=39.95 E-value=11 Score=34.05 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=23.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
.+|+|+|.|.|. +...|+.+- | ..++|||+...
T Consensus 32 ~~vLDiG~G~G~----~~~~l~~~~---~-~~~v~~vD~~~ 64 (215)
T 4dzr_A 32 TRVIDVGTGSGC----IAVSIALAC---P-GVSVTAVDLSM 64 (215)
T ss_dssp EEEEEEESSBCH----HHHHHHHHC---T-TEEEEEEECC-
T ss_pred CEEEEecCCHhH----HHHHHHHhC---C-CCeEEEEECCH
Confidence 899999999995 444555542 2 48999999754
No 169
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=39.84 E-value=1.6e+02 Score=27.79 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=25.0
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
..|+|+|.|.|. ++..||.+- | ..+++||+...
T Consensus 48 ~~vLDiGcG~G~----~~~~la~~~---p-~~~v~GiDis~ 80 (235)
T 3ckk_A 48 VEFADIGCGYGG----LLVELSPLF---P-DTLILGLEIRV 80 (235)
T ss_dssp EEEEEETCTTCH----HHHHHGGGS---T-TSEEEEEESCH
T ss_pred CeEEEEccCCcH----HHHHHHHHC---C-CCeEEEEECCH
Confidence 789999999985 455677663 3 47899998754
No 170
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=39.82 E-value=78 Score=31.71 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=55.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
-.|+|+|.|.|. ++-.++.+- | | ..+|+|++.... .-+...+-++..|+. .+|..
T Consensus 205 ~~vLD~gcGsG~----~~ie~a~~~-~-~-~~~v~g~Di~~~-----------------~i~~a~~n~~~~g~~~i~~~~ 260 (354)
T 3tma_A 205 MRVLDPFTGSGT----IALEAASTL-G-P-TSPVYAGDLDEK-----------------RLGLAREAALASGLSWIRFLR 260 (354)
T ss_dssp CCEEESSCTTSH----HHHHHHHHH-C-T-TSCEEEEESCHH-----------------HHHHHHHHHHHTTCTTCEEEE
T ss_pred CEEEeCCCCcCH----HHHHHHHhh-C-C-CceEEEEECCHH-----------------HHHHHHHHHHHcCCCceEEEe
Confidence 679999999984 444444432 2 2 478999987532 233344445566764 44433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCC--CchHHHHHHHHH-hcCCCEEEEE
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHST--PDERTEFLRVLR-SLEPKGVILS 425 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es--~~~r~~~L~~IR-~L~PkvVvlv 425 (561)
- +..++... ...-++|+.|-.|... +.+.. ..-...+++.++ .|+|...+++
T Consensus 261 ~---D~~~~~~~---~~~~D~Ii~npPyg~r-~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 261 A---DARHLPRF---FPEVDRILANPPHGLR-LGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp C---CGGGGGGT---CCCCSEEEECCCSCC-----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred C---ChhhCccc---cCCCCEEEECCCCcCc-cCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3 23332211 1122688888887642 22110 011245666654 5778644443
No 171
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=39.68 E-value=1.8e+02 Score=28.99 Aligned_cols=59 Identities=14% Similarity=0.285 Sum_probs=31.6
Q ss_pred CCCCCchh-HhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 259 SPWFAFPN-NIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 259 sP~~kfah-ftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
.|=.+|+. |..+..|++.+-..-. -...-+|+|+|.|.|.. ...|+.+. -++|+|+...
T Consensus 23 ~~~k~~GQnfL~d~~i~~~Iv~~l~-~~~~~~VLEIG~G~G~l----T~~La~~~------~~V~aVEid~ 82 (295)
T 3gru_A 23 KPKKKLGQCFLIDKNFVNKAVESAN-LTKDDVVLEIGLGKGIL----TEELAKNA------KKVYVIEIDK 82 (295)
T ss_dssp -------CCEECCHHHHHHHHHHTT-CCTTCEEEEECCTTSHH----HHHHHHHS------SEEEEEESCG
T ss_pred CCccccCccccCCHHHHHHHHHhcC-CCCcCEEEEECCCchHH----HHHHHhcC------CEEEEEECCH
Confidence 33334443 6666666555432211 11226899999999964 44555541 4789998754
No 172
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=39.13 E-value=63 Score=30.17 Aligned_cols=103 Identities=12% Similarity=0.184 Sum_probs=55.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-.|+|+|.|.|.- ...|+.. . | ..+||+|+.... .-....+.++..|+. ++|.
T Consensus 73 ~~vLDiG~G~G~~----~~~la~~--~-~-~~~v~~vD~~~~-----------------~~~~a~~~~~~~~~~~~v~~~ 127 (232)
T 3ntv_A 73 KNILEIGTAIGYS----SMQFASI--S-D-DIHVTTIERNET-----------------MIQYAKQNLATYHFENQVRII 127 (232)
T ss_dssp CEEEEECCSSSHH----HHHHHTT--C-T-TCEEEEEECCHH-----------------HHHHHHHHHHHTTCTTTEEEE
T ss_pred CEEEEEeCchhHH----HHHHHHh--C-C-CCEEEEEECCHH-----------------HHHHHHHHHHHcCCCCcEEEE
Confidence 6899999999853 3344542 2 2 479999987532 234444555666663 5554
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccC
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNM 429 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ea 429 (561)
.-. ..++-++.+ -..=+.|+++.. ......+|+.+ +.|+|..++++++-.
T Consensus 128 ~~d---~~~~~~~~~-~~~fD~V~~~~~----------~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 128 EGN---ALEQFENVN-DKVYDMIFIDAA----------KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ESC---GGGCHHHHT-TSCEEEEEEETT----------SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ECC---HHHHHHhhc-cCCccEEEEcCc----------HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 332 222111011 011134444421 12344566655 679999999986543
No 173
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=38.44 E-value=42 Score=33.26 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=30.4
Q ss_pred HhhhHH----HHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 267 NIANSS----ILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 267 ftANqA----ILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
|..|.. |++++.-... -+|+|+|.|.|.-=..|.+....+ ..++|+|+..
T Consensus 24 fL~d~~i~~~iv~~~~~~~~-----~~VLEIG~G~G~lt~~La~~~~~~------~~~V~avDid 77 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIRPERG-----ERMVEIGPGLGALTGPVIARLATP------GSPLHAVELD 77 (279)
T ss_dssp EECCHHHHHHHHHHHCCCTT-----CEEEEECCTTSTTHHHHHHHHCBT------TBCEEEEECC
T ss_pred ccCCHHHHHHHHHhcCCCCc-----CEEEEEccccHHHHHHHHHhCCCc------CCeEEEEECC
Confidence 444544 4444443334 789999999998655444432110 2668999874
No 174
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=36.92 E-value=2.3e+02 Score=25.64 Aligned_cols=106 Identities=10% Similarity=0.095 Sum_probs=55.0
Q ss_pred eEEEEcccc-CCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceEEEEE
Q 008559 288 LHILDIGVS-HGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINR 366 (561)
Q Consensus 288 VHIIDfgI~-~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpFeF~~ 366 (561)
-.|+|+|.| .|. +...|+.+. ..++|||+.... .-+...+-++..|+.++|..
T Consensus 57 ~~vLDlG~G~~G~----~~~~la~~~-----~~~v~~vD~s~~-----------------~~~~a~~~~~~~~~~v~~~~ 110 (230)
T 3evz_A 57 EVALEIGTGHTAM----MALMAEKFF-----NCKVTATEVDEE-----------------FFEYARRNIERNNSNVRLVK 110 (230)
T ss_dssp CEEEEECCTTTCH----HHHHHHHHH-----CCEEEEEECCHH-----------------HHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEcCCCHHHH----HHHHHHHhc-----CCEEEEEECCHH-----------------HHHHHHHHHHHhCCCcEEEe
Confidence 689999999 885 334455542 268999987532 23444455566677555544
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCC--------------CchHHHHHHHH-HhcCCCEEEEEe
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHST--------------PDERTEFLRVL-RSLEPKGVILSE 426 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es--------------~~~r~~~L~~I-R~L~PkvVvlvE 426 (561)
-....++.+. -..=+.|+.|..+ |+..+.. ......+|+.+ +-|+|...+++.
T Consensus 111 ~d~~~~~~~~-----~~~fD~I~~npp~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 111 SNGGIIKGVV-----EGTFDVIFSAPPY--YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CSSCSSTTTC-----CSCEEEEEECCCC--C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCchhhhhcc-----cCceeEEEECCCC--cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 3321122221 1112455555443 2222100 01125566665 448999887764
No 175
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=36.84 E-value=2.8e+02 Score=26.22 Aligned_cols=51 Identities=20% Similarity=0.232 Sum_probs=32.4
Q ss_pred hHhhhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 266 NNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 266 hftANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
||..+..|++.+-..-. ....-+|+|+|.|.|. |...|+.+. -++|||+..
T Consensus 11 ~fl~d~~~~~~i~~~~~-~~~~~~VLDiG~G~G~----lt~~l~~~~------~~v~~vD~~ 61 (244)
T 1qam_A 11 NFITSKHNIDKIMTNIR-LNEHDNIFEIGSGKGH----FTLELVQRC------NFVTAIEID 61 (244)
T ss_dssp CBCCCHHHHHHHHTTCC-CCTTCEEEEECCTTSH----HHHHHHHHS------SEEEEECSC
T ss_pred cccCCHHHHHHHHHhCC-CCCCCEEEEEeCCchH----HHHHHHHcC------CeEEEEECC
Confidence 45556666666543322 1223689999999986 455666652 479999874
No 176
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=36.12 E-value=1e+02 Score=28.46 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=23.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+..
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~s 79 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ--A----ARWAAYDFS 79 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG--S----SEEEEEESC
T ss_pred CeEEEeCCCCCH----HHHHHHHc--C----CEEEEEECC
Confidence 689999999986 66677776 2 489999874
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=36.07 E-value=53 Score=34.92 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=61.0
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHH---
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNY--- 347 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~et--- 347 (561)
..|++.+.-... -.|+|+|.|.|.+-..| |.+- | ..+++||+..... ++.+
T Consensus 232 ~~ml~~l~l~~g-----~~VLDLGCGsG~la~~L----A~~~-g---~~~V~GVDis~~~-------------l~~A~~M 285 (433)
T 1u2z_A 232 SDVYQQCQLKKG-----DTFMDLGSGVGNCVVQA----ALEC-G---CALSFGCEIMDDA-------------SDLTILQ 285 (433)
T ss_dssp HHHHHHTTCCTT-----CEEEEESCTTSHHHHHH----HHHH-C---CSEEEEEECCHHH-------------HHHHHHH
T ss_pred HHHHHhcCCCCC-----CEEEEeCCCcCHHHHHH----HHHC-C---CCEEEEEeCCHHH-------------HHHHHHh
Confidence 345666644444 68999999999755444 3332 1 3589999875421 1222
Q ss_pred HHHHHHHHHhcCce---EEEEEEecCCCCCCccccc--cCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEE
Q 008559 348 SLQLLGFAKSMNIN---LQINRLESHPLQDLSSQMV--STSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGV 422 (561)
Q Consensus 348 g~rL~~fA~~lgVp---FeF~~V~~~~le~L~~~~L--~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvV 422 (561)
-..+.+-++.+|+. ++| +....+.. ...+ ...+=++|++|..+ + . ++....+-++.+.|+|...
T Consensus 286 l~~ar~~~~~~Gl~~~nV~~--i~gD~~~~--~~~~~~~~~~FDvIvvn~~l--~--~---~d~~~~L~el~r~LKpGG~ 354 (433)
T 1u2z_A 286 YEELKKRCKLYGMRLNNVEF--SLKKSFVD--NNRVAELIPQCDVILVNNFL--F--D---EDLNKKVEKILQTAKVGCK 354 (433)
T ss_dssp HHHHHHHHHHTTBCCCCEEE--EESSCSTT--CHHHHHHGGGCSEEEECCTT--C--C---HHHHHHHHHHHTTCCTTCE
T ss_pred HHHHHHHHHHcCCCCCceEE--EEcCcccc--ccccccccCCCCEEEEeCcc--c--c---ccHHHHHHHHHHhCCCCeE
Confidence 22234445566743 444 32212211 0001 01223577776433 1 1 1233344455678999988
Q ss_pred EEEe
Q 008559 423 ILSE 426 (561)
Q Consensus 423 vlvE 426 (561)
+++-
T Consensus 355 lVi~ 358 (433)
T 1u2z_A 355 IISL 358 (433)
T ss_dssp EEES
T ss_pred EEEe
Confidence 7764
No 178
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=35.03 E-value=2.2e+02 Score=24.49 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=27.1
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.+++.+.-.+. -+|+|+|.|.|. +...|+.+- .++|+|+..
T Consensus 24 ~~~~~~~~~~~-----~~vldiG~G~G~----~~~~l~~~~------~~v~~~D~~ 64 (192)
T 1l3i_A 24 LIMCLAEPGKN-----DVAVDVGCGTGG----VTLELAGRV------RRVYAIDRN 64 (192)
T ss_dssp HHHHHHCCCTT-----CEEEEESCTTSH----HHHHHHTTS------SEEEEEESC
T ss_pred HHHHhcCCCCC-----CEEEEECCCCCH----HHHHHHHhc------CEEEEEECC
Confidence 44555543444 789999999984 444555542 589999874
No 179
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=34.63 E-value=2.7e+02 Score=25.46 Aligned_cols=53 Identities=13% Similarity=-0.024 Sum_probs=34.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCc--eEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNI--NLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgV--pFeF~ 365 (561)
-+|+|+|.|.|. +...|+.+ | .++|||+... +.-+...+-++..|+ .++|.
T Consensus 80 ~~vLD~gcG~G~----~~~~la~~--~----~~v~~vD~s~-----------------~~~~~a~~~~~~~~~~~~~~~~ 132 (241)
T 3gdh_A 80 DVVVDAFCGVGG----NTIQFALT--G----MRVIAIDIDP-----------------VKIALARNNAEVYGIADKIEFI 132 (241)
T ss_dssp SEEEETTCTTSH----HHHHHHHT--T----CEEEEEESCH-----------------HHHHHHHHHHHHTTCGGGEEEE
T ss_pred CEEEECccccCH----HHHHHHHc--C----CEEEEEECCH-----------------HHHHHHHHHHHHcCCCcCeEEE
Confidence 689999999984 44555554 2 6899998753 233444555666777 46655
Q ss_pred EE
Q 008559 366 RL 367 (561)
Q Consensus 366 ~V 367 (561)
.-
T Consensus 133 ~~ 134 (241)
T 3gdh_A 133 CG 134 (241)
T ss_dssp ES
T ss_pred EC
Confidence 44
No 180
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=32.69 E-value=1.4e+02 Score=28.36 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=28.1
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.|++.+.-.+. -.|+|+|.|.|. +...|+.+- | | ..++++|+..
T Consensus 103 ~i~~~~~~~~~-----~~VLDiG~G~G~----~~~~la~~~-~-~-~~~v~~vD~s 146 (277)
T 1o54_A 103 FIAMMLDVKEG-----DRIIDTGVGSGA----MCAVLARAV-G-S-SGKVFAYEKR 146 (277)
T ss_dssp HHHHHTTCCTT-----CEEEEECCTTSH----HHHHHHHHT-T-T-TCEEEEECCC
T ss_pred HHHHHhCCCCC-----CEEEEECCcCCH----HHHHHHHHh-C-C-CcEEEEEECC
Confidence 45555543444 689999999984 444555542 2 2 3689999864
No 181
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=32.44 E-value=3e+02 Score=25.66 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=22.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|.--.. |+.+- | ..++|||+..
T Consensus 87 ~~vLdiG~G~G~~~~~----l~~~~---~-~~~v~~vD~s 118 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHA----FADAL---P-EITTFGLDVS 118 (269)
T ss_dssp CEEEEETCTTSTTHHH----HHHTC---T-TSEEEEEESC
T ss_pred CEEEEECCCCCHHHHH----HHHhC---C-CCeEEEEeCC
Confidence 6899999999875443 44432 1 2589999874
No 182
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=30.91 E-value=1.3e+02 Score=29.00 Aligned_cols=96 Identities=15% Similarity=0.045 Sum_probs=52.4
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce-EEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN-LQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp-FeF~~ 366 (561)
=.|+|+|.|.|.-- ..||.+- + ..++++|+... +.-+.+.+-++..|+. .+|.
T Consensus 121 ~~VLDlgcG~G~~s----~~la~~~--~--~~~V~~vD~s~-----------------~av~~a~~n~~~n~l~~~~~~- 174 (272)
T 3a27_A 121 EVVVDMFAGIGYFT----IPLAKYS--K--PKLVYAIEKNP-----------------TAYHYLCENIKLNKLNNVIPI- 174 (272)
T ss_dssp CEEEETTCTTTTTH----HHHHHHT--C--CSEEEEEECCH-----------------HHHHHHHHHHHHTTCSSEEEE-
T ss_pred CEEEEecCcCCHHH----HHHHHhC--C--CCEEEEEeCCH-----------------HHHHHHHHHHHHcCCCCEEEE-
Confidence 46999999999743 3344442 1 36899998743 2334444555666663 4433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHHHhcCCCEEEEE
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILS 425 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~IR~L~PkvVvlv 425 (561)
.. +..++ +. ...=+.|++|... +....+...++.|+|..++++
T Consensus 175 -~~-d~~~~-~~---~~~~D~Vi~d~p~----------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 175 -LA-DNRDV-EL---KDVADRVIMGYVH----------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp -ES-CGGGC-CC---TTCEEEEEECCCS----------SGGGGHHHHHHHEEEEEEEEE
T ss_pred -EC-ChHHc-Cc---cCCceEEEECCcc----------cHHHHHHHHHHHcCCCCEEEE
Confidence 32 33333 21 1112466666432 122334445788999877764
No 183
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=30.71 E-value=2.9e+02 Score=25.31 Aligned_cols=32 Identities=19% Similarity=0.114 Sum_probs=22.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|. +...|+.+-+ .-+++||+..
T Consensus 76 ~~VLDlGcG~G~----~~~~la~~~~----~~~v~gvD~s 107 (230)
T 1fbn_A 76 SKILYLGASAGT----TPSHVADIAD----KGIVYAIEYA 107 (230)
T ss_dssp CEEEEESCCSSH----HHHHHHHHTT----TSEEEEEESC
T ss_pred CEEEEEcccCCH----HHHHHHHHcC----CcEEEEEECC
Confidence 579999999985 3445565532 2589999874
No 184
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=30.70 E-value=1.2e+02 Score=30.79 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=59.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc-CceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM-NINLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l-gVpFeF~~ 366 (561)
-+|+|+|.|.|. +...|+++. | ..+||+|+.... -++.+.+++..++..+ +-.++|..
T Consensus 122 ~~VLdIG~G~G~----~a~~la~~~---~-~~~V~~VDis~~-------------~l~~Ar~~~~~~~~gl~~~rv~~~~ 180 (334)
T 1xj5_A 122 KKVLVIGGGDGG----VLREVARHA---S-IEQIDMCEIDKM-------------VVDVSKQFFPDVAIGYEDPRVNLVI 180 (334)
T ss_dssp CEEEEETCSSSH----HHHHHTTCT---T-CCEEEEEESCHH-------------HHHHHHHHCHHHHGGGGSTTEEEEE
T ss_pred CEEEEECCCccH----HHHHHHHcC---C-CCEEEEEECCHH-------------HHHHHHHHHHhhccccCCCcEEEEE
Confidence 689999999985 556667653 3 479999987532 1233444444433222 12344433
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccCC
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNMD 430 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ead 430 (561)
-.. .++- ..+.-..=++|++|+....+...+ --...||+.+ +.|+|..++++..+.-
T Consensus 181 ~D~---~~~l-~~~~~~~fDlIi~d~~~p~~~~~~---l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 181 GDG---VAFL-KNAAEGSYDAVIVDSSDPIGPAKE---LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp SCH---HHHH-HTSCTTCEEEEEECCCCTTSGGGG---GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCH---HHHH-HhccCCCccEEEECCCCccCcchh---hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 221 1110 000001124666665422221110 0124566665 6699999999875443
No 185
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=30.37 E-value=84 Score=27.39 Aligned_cols=48 Identities=19% Similarity=0.311 Sum_probs=36.1
Q ss_pred EEEcccc-CCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCceE
Q 008559 290 ILDIGVS-HGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINL 362 (561)
Q Consensus 290 IIDfgI~-~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVpF 362 (561)
|||++-. ...+|..|++.|..+ -|++-||.-..+ .++.+.|+..|+|+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~------gl~~vGV~g~~~-------------------~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTST------GLRIIGVSGCKD-------------------ASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTT------TCEEEEEESCCC-------------------HHHHHHHHHHTCCE
T ss_pred EEEccccCChHHHHHHHHHHHHc------CCEEEEEeCCCc-------------------HHHHHHHHHCCCCc
Confidence 8888743 468999999999887 388888865321 34567888889885
No 186
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=29.56 E-value=2e+02 Score=26.66 Aligned_cols=44 Identities=23% Similarity=0.209 Sum_probs=28.2
Q ss_pred HHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 272 SILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 272 AILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
.|++.+.-.+. -+|+|+|.|.|. +...|+.+- | | ..++++|+..
T Consensus 84 ~i~~~~~~~~~-----~~vldiG~G~G~----~~~~l~~~~-~-~-~~~v~~~D~~ 127 (255)
T 3mb5_A 84 LIVAYAGISPG-----DFIVEAGVGSGA----LTLFLANIV-G-P-EGRVVSYEIR 127 (255)
T ss_dssp HHHHHTTCCTT-----CEEEEECCTTSH----HHHHHHHHH-C-T-TSEEEEECSC
T ss_pred HHHHhhCCCCC-----CEEEEecCCchH----HHHHHHHHh-C-C-CeEEEEEecC
Confidence 45555544444 689999999984 334444431 2 2 4789999874
No 187
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=27.69 E-value=1.8e+02 Score=28.50 Aligned_cols=136 Identities=12% Similarity=0.032 Sum_probs=65.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc-CceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM-NINLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l-gVpFeF~~ 366 (561)
-+|+|+|.|.|. +...|+++. | ..+||+|+.... -++.+.+++..++..+ +-.++|..
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDid~~-------------~~~~a~~~~~~~~~~~~~~~v~~~~ 150 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---S-VEKAILCEVDGL-------------VIEAARKYLKQTSCGFDDPRAEIVI 150 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---T-CSEEEEEESCHH-------------HHHHHHHHCHHHHGGGGCTTEEEEE
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---C-CCEEEEEECCHH-------------HHHHHHHHhHhhccccCCCceEEEE
Confidence 689999999985 556666653 2 479999987532 1233444444433333 12344332
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccCCCCCCCCCChhhHHHH
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNMDCSCGNCGDFATGFAR 445 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ead~~~~n~~~F~~RF~e 445 (561)
-.. .+-+.. .-..=++|+++.... .+.....--...||+.+ +.|+|..+++++...- . .-...+.+
T Consensus 151 ~D~--~~~l~~---~~~~fD~Ii~d~~~~--~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~---~---~~~~~~~~ 217 (296)
T 1inl_A 151 ANG--AEYVRK---FKNEFDVIIIDSTDP--TAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP---F---YDIGWFKL 217 (296)
T ss_dssp SCH--HHHGGG---CSSCEEEEEEEC------------CCSHHHHHHHHHHEEEEEEEEEECCCT---T---TTHHHHHH
T ss_pred CcH--HHHHhh---CCCCceEEEEcCCCc--ccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc---c---cCHHHHHH
Confidence 211 000110 001125666664321 01100000114566665 5699999998864221 1 11344555
Q ss_pred HHHHHHHHHhhh
Q 008559 446 RVEYLWRFLDST 457 (561)
Q Consensus 446 aL~yY~alfDSL 457 (561)
.+..+...|...
T Consensus 218 ~~~~l~~~F~~v 229 (296)
T 1inl_A 218 AYRRISKVFPIT 229 (296)
T ss_dssp HHHHHHHHCSEE
T ss_pred HHHHHHHHCCce
Confidence 555555555543
No 188
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=27.40 E-value=74 Score=28.84 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=31.4
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHhhccCCCCCc
Q 008559 168 RWAEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDA 206 (561)
Q Consensus 168 ~~l~~LLl~CA~AV~~gn~~~A~~lL~~L~~laSp~Gd~ 206 (561)
..+-+-|-+|++++++||...||.||.. -...-|+||-
T Consensus 56 ~EIW~ALraA~~~~e~~Dl~tAQ~Ilda-AgItvp~gdL 93 (137)
T 2ksn_A 56 KEIWDALKAAAHAFESNDHELAQAIIDG-ANITLPHGAL 93 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHH-HSCBCSSCCS
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHH-cCCcccCCcH
Confidence 4677889999999999999999999954 3467788873
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=26.46 E-value=2.5e+02 Score=26.51 Aligned_cols=104 Identities=16% Similarity=0.195 Sum_probs=53.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcCce--EEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNIN--LQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lgVp--FeF~ 365 (561)
-+|+|+|.+.|.-=..|.+.+ |+ .-+||+|+.... .-+...+..+..|+. ++|.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~------~~-~~~v~~iD~s~~-----------------~~~~a~~~~~~~g~~~~i~~~ 136 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAI------PE-DGKILAMDINKE-----------------NYELGLPVIKKAGVDHKIDFR 136 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHS------CT-TCEEEEEESCCH-----------------HHHHHHHHHHHTTCGGGEEEE
T ss_pred CEEEEeCCCcCHHHHHHHHhC------CC-CCEEEEEECCHH-----------------HHHHHHHHHHHcCCCCCeEEE
Confidence 589999999886333333322 22 369999987532 223444455556663 4443
Q ss_pred EEecCCCCCCcccccc-----CCCCCEEEEEeeccccccCCCCCchHHHHHHH-HHhcCCCEEEEEeccC
Q 008559 366 RLESHPLQDLSSQMVS-----TSPEETLIVCTQFRLHHLNHSTPDERTEFLRV-LRSLEPKGVILSENNM 429 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~-----~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~-IR~L~PkvVvlvE~ea 429 (561)
.-.. .+.+. . +. -..=+.|++++. ......+|+. .+-|+|..++++++-.
T Consensus 137 ~gda--~~~l~-~-l~~~~~~~~~fD~V~~d~~----------~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 137 EGPA--LPVLD-E-MIKDEKNHGSYDFIFVDAD----------KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp ESCH--HHHHH-H-HHHSGGGTTCBSEEEECSC----------STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred ECCH--HHHHH-H-HHhccCCCCCEEEEEEcCc----------hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 3221 11111 0 10 112245555422 1123445544 5779999999987533
No 190
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=26.40 E-value=98 Score=30.49 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=27.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
+.|.|.|.|.|--=-+|--.|+..-+..+...+|+|++.+.
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~ 147 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT 147 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH
Confidence 99999999999754445445554422112137999999864
No 191
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=25.33 E-value=88 Score=31.36 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=24.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+++. | ..+||+|+..
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDis 149 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---S-VENIDICEID 149 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---T-CCEEEEEESC
T ss_pred CEEEEEcCCccH----HHHHHHHcC---C-CCEEEEEECC
Confidence 689999999985 556666653 3 4799999875
No 192
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=25.32 E-value=3.3e+02 Score=25.00 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=26.5
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
..+++.+.-.+. -.|+|+|.|.|..-. .|+.+- + .++|+|+..
T Consensus 81 ~~~~~~l~~~~~-----~~vLdiG~G~G~~~~----~la~~~-~----~~v~~vD~~ 123 (235)
T 1jg1_A 81 AIMLEIANLKPG-----MNILEVGTGSGWNAA----LISEIV-K----TDVYTIERI 123 (235)
T ss_dssp HHHHHHHTCCTT-----CCEEEECCTTSHHHH----HHHHHH-C----SCEEEEESC
T ss_pred HHHHHhcCCCCC-----CEEEEEeCCcCHHHH----HHHHHh-C----CEEEEEeCC
Confidence 345565543343 579999999885433 344432 1 478999864
No 193
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=25.32 E-value=1.2e+02 Score=28.83 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=23.1
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAE 329 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~ 329 (561)
-+|+|+|.+.|.- .-.||.+- |+ .-+||+|+....
T Consensus 62 ~~VLDiG~G~G~~----t~~la~~~--~~-~~~v~~iD~~~~ 96 (242)
T 3r3h_A 62 KKVLELGTFTGYS----ALAMSLAL--PD-DGQVITCDINEG 96 (242)
T ss_dssp SEEEEEESCCSHH----HHHHHHTS--CT-TCEEEEEECCCS
T ss_pred CEEEEeeCCcCHH----HHHHHHhC--CC-CCEEEEEECCHH
Confidence 5799999998862 22344432 22 479999997653
No 194
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=25.13 E-value=4.6e+02 Score=25.08 Aligned_cols=30 Identities=10% Similarity=0.128 Sum_probs=21.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAP 326 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~ 326 (561)
-.|+|+|.|.|. +...|+.+ | .-++|+|+.
T Consensus 81 ~~vLDlG~G~G~----~~~~~a~~--~---~~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGL----VSIVAFLA--G---ADQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSH----HHHHHHHT--T---CSEEEEEEC
T ss_pred CeEEEecccccH----HHHHHHHc--C---CCEEEEEeC
Confidence 589999999984 22355554 2 148999987
No 195
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=24.95 E-value=4.1e+02 Score=26.07 Aligned_cols=64 Identities=6% Similarity=-0.105 Sum_probs=37.8
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
+-+.+.+.+.-... -+|+|+|.+.|.-=..|.+.+ ++ .-+|++|+.... .-
T Consensus 106 ~s~l~~~~l~~~~g-----~~VLDlg~G~G~~t~~la~~~------~~-~~~v~avD~s~~-----------------~l 156 (315)
T 1ixk_A 106 SSMYPPVALDPKPG-----EIVADMAAAPGGKTSYLAQLM------RN-DGVIYAFDVDEN-----------------RL 156 (315)
T ss_dssp HHHHHHHHHCCCTT-----CEEEECCSSCSHHHHHHHHHT------TT-CSEEEEECSCHH-----------------HH
T ss_pred HHHHHHHHhCCCCC-----CEEEEeCCCCCHHHHHHHHHh------CC-CCEEEEEcCCHH-----------------HH
Confidence 34445555544444 689999999986433333322 11 368999987532 33
Q ss_pred HHHHHHHHhcCce
Q 008559 349 LQLLGFAKSMNIN 361 (561)
Q Consensus 349 ~rL~~fA~~lgVp 361 (561)
+.+.+-++.+|++
T Consensus 157 ~~a~~~~~~~g~~ 169 (315)
T 1ixk_A 157 RETRLNLSRLGVL 169 (315)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCC
Confidence 4555556667773
No 196
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=24.61 E-value=3.9e+02 Score=24.08 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=28.8
Q ss_pred HHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCC--CCCCceEEEEecCCC
Q 008559 271 SSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSG--GPPPLVRLTIIAPTA 328 (561)
Q Consensus 271 qAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~g--GpP~~LRITgI~~~~ 328 (561)
..+++.+..... ..-+|+|+|.|.|..-. .|+.+-+ ..| ..++|+|+...
T Consensus 68 ~~~~~~l~~~~~---~~~~VLdiG~G~G~~~~----~la~~~~~~~~~-~~~v~~vD~~~ 119 (227)
T 2pbf_A 68 ALSLKRLINVLK---PGSRAIDVGSGSGYLTV----CMAIKMNVLENK-NSYVIGLERVK 119 (227)
T ss_dssp HHHHHHHTTTSC---TTCEEEEESCTTSHHHH----HHHHHTTTTTCT-TCEEEEEESCH
T ss_pred HHHHHHHHhhCC---CCCEEEEECCCCCHHHH----HHHHHhcccCCC-CCEEEEEeCCH
Confidence 355666642111 12689999999985333 3443321 113 47999998753
No 197
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=24.20 E-value=6.1e+02 Score=26.23 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=38.8
Q ss_pred hHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHH
Q 008559 270 NSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSL 349 (561)
Q Consensus 270 NqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~ 349 (561)
.+.+.+.+.-... -+|+|+|.+.|.-=..|.+.+ ++ .-+|++++... ..-+
T Consensus 248 s~l~~~~l~~~~g-----~~VLDlgaG~G~~t~~la~~~----~~---~~~v~a~D~s~-----------------~~l~ 298 (450)
T 2yxl_A 248 SAVASIVLDPKPG-----ETVVDLAAAPGGKTTHLAELM----KN---KGKIYAFDVDK-----------------MRMK 298 (450)
T ss_dssp HHHHHHHHCCCTT-----CEEEESSCTTCHHHHHHHHHT----TT---CSEEEEECSCH-----------------HHHH
T ss_pred hHHHHHhcCCCCc-----CEEEEeCCCccHHHHHHHHHc----CC---CCEEEEEcCCH-----------------HHHH
Confidence 3444555544343 689999999986433333322 11 36899998753 2335
Q ss_pred HHHHHHHhcCce-EEE
Q 008559 350 QLLGFAKSMNIN-LQI 364 (561)
Q Consensus 350 rL~~fA~~lgVp-FeF 364 (561)
.+.+-++.+|++ ++|
T Consensus 299 ~~~~~~~~~g~~~v~~ 314 (450)
T 2yxl_A 299 RLKDFVKRMGIKIVKP 314 (450)
T ss_dssp HHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHcCCCcEEE
Confidence 555666777873 444
No 198
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=24.07 E-value=3.9e+02 Score=24.50 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=21.7
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|.-= ..|+.+- |+ .-++|+|+..
T Consensus 62 ~~VLdiG~G~G~~~----~~la~~~--~~-~~~v~~vD~~ 94 (239)
T 2hnk_A 62 KRIIEIGTFTGYSS----LCFASAL--PE-DGKILCCDVS 94 (239)
T ss_dssp SEEEEECCTTCHHH----HHHHHHS--CT-TCEEEEEESC
T ss_pred CEEEEEeCCCCHHH----HHHHHhC--CC-CCEEEEEECC
Confidence 57999999987532 3344432 22 3689999874
No 199
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=23.67 E-value=1.9e+02 Score=28.68 Aligned_cols=135 Identities=10% Similarity=0.099 Sum_probs=65.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhc-CceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSM-NINLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~l-gVpFeF~~ 366 (561)
-+|+|+|.|.|. +...|+++. | ..+||+|+.... -++.+.+++...+..+ +-.+++..
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDid~~-------------~i~~ar~~~~~~~~~~~~~rv~v~~ 155 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKHP---S-VESVVQCEIDED-------------VIQVSKKFLPGMAIGYSSSKLTLHV 155 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---T-CCEEEEEESCHH-------------HHHHHHHHCHHHHGGGGCTTEEEEE
T ss_pred CEEEEECCCchH----HHHHHHHcC---C-CCEEEEEECCHH-------------HHHHHHHHhHHhhcccCCCcEEEEE
Confidence 689999999885 555666653 3 479999987532 1233444444333322 22344332
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccCCCCCCCCCChhhHHHH
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNMDCSCGNCGDFATGFAR 445 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ead~~~~n~~~F~~RF~e 445 (561)
-.. .+-+.. .-..=++|++++..... ... .-....|++.+ +.|+|..+++++.... ...+ +.+.+
T Consensus 156 ~Da--~~~l~~---~~~~fD~Ii~d~~~~~~--~~~-~l~~~~~l~~~~~~LkpgG~lv~~~~~~---~~~~---~~~~~ 221 (304)
T 2o07_A 156 GDG--FEFMKQ---NQDAFDVIITDSSDPMG--PAE-SLFKESYYQLMKTALKEDGVLCCQGECQ---WLHL---DLIKE 221 (304)
T ss_dssp SCH--HHHHHT---CSSCEEEEEEECC--------------CHHHHHHHHHEEEEEEEEEEEECT---TTCH---HHHHH
T ss_pred CcH--HHHHhh---CCCCceEEEECCCCCCC--cch-hhhHHHHHHHHHhccCCCeEEEEecCCc---ccch---HHHHH
Confidence 211 000110 01122567776543211 100 00123567665 5689999999876443 2222 23333
Q ss_pred HHHHHHHHHhhh
Q 008559 446 RVEYLWRFLDST 457 (561)
Q Consensus 446 aL~yY~alfDSL 457 (561)
...+...+|...
T Consensus 222 ~~~~l~~~f~~v 233 (304)
T 2o07_A 222 MRQFCQSLFPVV 233 (304)
T ss_dssp HHHHHHHHCSEE
T ss_pred HHHHHHHhCCCc
Confidence 334445555543
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=23.31 E-value=3.7e+02 Score=25.07 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=24.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAE 329 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~ 329 (561)
-+|+|+|.|.|..=..|.+.+..- + | .-+||+|+....
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~--~-~-~~~V~gvD~s~~ 120 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIM--G-I-DCQVIGIDRDLS 120 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHT--T-C-CCEEEEEESCCT
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhc--C-C-CCEEEEEeCChH
Confidence 479999999986544444432211 1 2 368999997643
No 201
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=22.41 E-value=1.2e+02 Score=26.83 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=22.8
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTA 328 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~ 328 (561)
-.|+|+|.|.|. +...|+.+ + ++|||+...
T Consensus 25 ~~vLD~GcG~G~----~~~~l~~~--~-----~v~gvD~s~ 54 (170)
T 3q87_B 25 KIVLDLGTSTGV----ITEQLRKR--N-----TVVSTDLNI 54 (170)
T ss_dssp CEEEEETCTTCH----HHHHHTTT--S-----EEEEEESCH
T ss_pred CeEEEeccCccH----HHHHHHhc--C-----cEEEEECCH
Confidence 489999999983 55666665 2 999998753
No 202
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=22.31 E-value=6.4e+02 Score=26.68 Aligned_cols=62 Identities=11% Similarity=0.065 Sum_probs=36.7
Q ss_pred HhhccCCCC-CchhHhhhHHHHHHHhcCccCcccceEEEEcccc------CCCchHHHHHHHHhCCCCCCCceEEEEecC
Q 008559 254 NFYDKSPWF-AFPNNIANSSILQILAQDRHNQVQNLHILDIGVS------HGVQWPTLLEALTRRSGGPPPLVRLTIIAP 326 (561)
Q Consensus 254 ~f~e~sP~~-kfahftANqAILEA~~g~~~~~~~~VHIIDfgI~------~G~QWpsLiqaLA~R~gGpP~~LRITgI~~ 326 (561)
..|+--+|. ...+.-.=+.+|+-+.. +. .+|+|+|+| .|..+..+++.+- | ..+||||+.
T Consensus 189 ~~Y~tDK~~~~h~y~~~Ye~lL~~l~~-~~-----~rVLDIGCG~~~~~~TGG~Sl~la~~~f------P-~a~V~GVDi 255 (419)
T 3sso_A 189 SRYFTPKFGFLHWFTPHYDRHFRDYRN-QQ-----VRVLEIGVGGYKHPEWGGGSLRMWKSFF------P-RGQIYGLDI 255 (419)
T ss_dssp HHTTCTTBSSSCBCHHHHHHHHGGGTT-SC-----CEEEEECCSCTTCSSCCCHHHHHHHHHC------T-TCEEEEEES
T ss_pred HHhCCCcccccchHHHHHHHHHHhhcC-CC-----CEEEEEecCCCcCCCCCHHHHHHHHHhC------C-CCEEEEEEC
Confidence 456656666 33333344445554432 23 899999999 4665554444331 2 469999987
Q ss_pred CC
Q 008559 327 TA 328 (561)
Q Consensus 327 ~~ 328 (561)
..
T Consensus 256 Sp 257 (419)
T 3sso_A 256 MD 257 (419)
T ss_dssp SC
T ss_pred CH
Confidence 53
No 203
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=21.69 E-value=5.4e+02 Score=25.19 Aligned_cols=134 Identities=14% Similarity=0.158 Sum_probs=64.6
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHh-cC-ceEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKS-MN-INLQIN 365 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~-lg-VpFeF~ 365 (561)
-+|+|+|.|-|. +...|++++ | .-+||+|+.... -++...+++...... ++ -.++|.
T Consensus 85 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~V~~VDid~~-------------vi~~ar~~~~~~~~~~~~~~rv~~~ 143 (294)
T 3adn_A 85 KHVLIIGGGDGA----MLREVTRHK---N-VESITMVEIDAG-------------VVSFCRQYLPNHNAGSYDDPRFKLV 143 (294)
T ss_dssp CEEEEESCTTCH----HHHHHHTCT---T-CCEEEEECSCTT-------------HHHHHHHHCHHHHSSCTTCTTCCEE
T ss_pred CEEEEEeCChhH----HHHHHHhCC---C-CCEEEEEECCHH-------------HHHHHHHhhhhcccccccCCceEEE
Confidence 689999999985 556666653 2 479999987542 133344444433211 11 123332
Q ss_pred EEecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchH--HHHHHHH-HhcCCCEEEEEeccCCCCCCCCCChhhH
Q 008559 366 RLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDER--TEFLRVL-RSLEPKGVILSENNMDCSCGNCGDFATG 442 (561)
Q Consensus 366 ~V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r--~~~L~~I-R~L~PkvVvlvE~ead~~~~n~~~F~~R 442 (561)
.-.. .+-+.. .-..=++|++++.... ... ... .+|++.+ +.|+|..++++..++. ...+ +.
T Consensus 144 ~~D~--~~~l~~---~~~~fDvIi~D~~~p~--~~~---~~l~~~~f~~~~~~~LkpgG~lv~~~~s~---~~~~---~~ 207 (294)
T 3adn_A 144 IDDG--VNFVNQ---TSQTFDVIISDCTDPI--GPG---ESLFTSAFYEGCKRCLNPGGIFVAQNGVC---FLQQ---EE 207 (294)
T ss_dssp CSCS--CC---C---CCCCEEEEEECC---------------CCHHHHHHHHHTEEEEEEEEEEEEEC---SSCC---HH
T ss_pred EChH--HHHHhh---cCCCccEEEECCCCcc--Ccc---hhccHHHHHHHHHHhcCCCCEEEEecCCc---ccch---HH
Confidence 2111 111110 0112246666643211 111 111 5677665 5699999988865443 2222 34
Q ss_pred HHHHHHHHHHHHhhhh
Q 008559 443 FARRVEYLWRFLDSTS 458 (561)
Q Consensus 443 F~eaL~yY~alfDSLd 458 (561)
+.+.+..+..+|....
T Consensus 208 ~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 208 AIDSHRKLSHYFSDVG 223 (294)
T ss_dssp HHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHCCCeE
Confidence 4444444555565443
No 204
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=21.42 E-value=2.9e+02 Score=26.24 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=21.9
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-.|+|+|.|.|.-- ..|+.+- .| ..++|+|+..
T Consensus 112 ~~VLD~G~G~G~~~----~~la~~~--~~-~~~v~~vD~s 144 (275)
T 1yb2_A 112 MDILEVGVGSGNMS----SYILYAL--NG-KGTLTVVERD 144 (275)
T ss_dssp CEEEEECCTTSHHH----HHHHHHH--TT-SSEEEEECSC
T ss_pred CEEEEecCCCCHHH----HHHHHHc--CC-CCEEEEEECC
Confidence 68999999998533 3344331 12 3689999874
No 205
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=21.32 E-value=5.1e+02 Score=24.85 Aligned_cols=134 Identities=8% Similarity=0.102 Sum_probs=65.3
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHHHHHHHHHHhcC-ceEEEEE
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMN-INLQINR 366 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg~rL~~fA~~lg-VpFeF~~ 366 (561)
-+|+|+|.|.| .+...|++++ | .-+||+|+.... -++.+.+++..++..++ =.+++..
T Consensus 77 ~~VLdiG~G~G----~~~~~l~~~~---~-~~~v~~vEid~~-------------~v~~ar~~~~~~~~~~~~~rv~v~~ 135 (275)
T 1iy9_A 77 EHVLVVGGGDG----GVIREILKHP---S-VKKATLVDIDGK-------------VIEYSKKFLPSIAGKLDDPRVDVQV 135 (275)
T ss_dssp CEEEEESCTTC----HHHHHHTTCT---T-CSEEEEEESCHH-------------HHHHHHHHCHHHHTTTTSTTEEEEE
T ss_pred CEEEEECCchH----HHHHHHHhCC---C-CceEEEEECCHH-------------HHHHHHHHhHhhccccCCCceEEEE
Confidence 68999999998 3556666653 2 478999987532 12334444444332232 1233332
Q ss_pred EecCCCCCCccccccCCCCCEEEEEeeccccccCCCCCchHHHHHHHH-HhcCCCEEEEEeccCCCCCCCCCChhhHHHH
Q 008559 367 LESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVL-RSLEPKGVILSENNMDCSCGNCGDFATGFAR 445 (561)
Q Consensus 367 V~~~~le~L~~~~L~~~~~EaLaVN~~f~LH~L~~es~~~r~~~L~~I-R~L~PkvVvlvE~ead~~~~n~~~F~~RF~e 445 (561)
-.. .+-+.. . -..=++|+++... +.-.... --..+|++.+ +.|+|..++++....- .. -...+.+
T Consensus 136 ~D~--~~~l~~--~-~~~fD~Ii~d~~~--~~~~~~~-l~~~~~~~~~~~~L~pgG~lv~~~~~~---~~---~~~~~~~ 201 (275)
T 1iy9_A 136 DDG--FMHIAK--S-ENQYDVIMVDSTE--PVGPAVN-LFTKGFYAGIAKALKEDGIFVAQTDNP---WF---TPELITN 201 (275)
T ss_dssp SCS--HHHHHT--C-CSCEEEEEESCSS--CCSCCCC-CSTTHHHHHHHHHEEEEEEEEEECCCT---TT---CHHHHHH
T ss_pred CcH--HHHHhh--C-CCCeeEEEECCCC--CCCcchh-hhHHHHHHHHHHhcCCCcEEEEEcCCc---cc---cHHHHHH
Confidence 211 110110 0 1122566666433 1111100 0013566655 6699999998874322 11 1344554
Q ss_pred HHHHHHHHHhh
Q 008559 446 RVEYLWRFLDS 456 (561)
Q Consensus 446 aL~yY~alfDS 456 (561)
.+..+..+|..
T Consensus 202 ~~~~l~~~F~~ 212 (275)
T 1iy9_A 202 VQRDVKEIFPI 212 (275)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHHhCCC
Confidence 44444444543
No 206
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=20.88 E-value=2.9e+02 Score=24.50 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=23.2
Q ss_pred eEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCC
Q 008559 288 LHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPT 327 (561)
Q Consensus 288 VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~ 327 (561)
-+|+|+|.|.|. +...|+.+ | .-++|||+..
T Consensus 53 ~~vlD~gcG~G~----~~~~l~~~--~---~~~v~~vD~~ 83 (200)
T 1ne2_A 53 RSVIDAGTGNGI----LACGSYLL--G---AESVTAFDID 83 (200)
T ss_dssp SEEEEETCTTCH----HHHHHHHT--T---BSEEEEEESC
T ss_pred CEEEEEeCCccH----HHHHHHHc--C---CCEEEEEECC
Confidence 689999999987 44566665 2 3589999874
No 207
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=20.75 E-value=3.7e+02 Score=27.61 Aligned_cols=123 Identities=13% Similarity=0.162 Sum_probs=63.2
Q ss_pred hhHHHHHHHhcCccCcccceEEEEccccCCCchHHHHHHHHhCCCCCCCceEEEEecCCCCcCcCCCCCCCCCCCHHHHH
Q 008559 269 ANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYS 348 (561)
Q Consensus 269 ANqAILEA~~g~~~~~~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGpP~~LRITgI~~~~~~~~~~~~pf~~~~~l~etg 348 (561)
+-+.+.+.+.-.+. -+|+|+|.+.|.-=..|.+ +- | .-+|++++.... .+
T Consensus 234 ~s~~~~~~l~~~~g-----~~VLDlgaG~G~~t~~la~----~~---~-~~~v~a~D~~~~-------------~l---- 283 (429)
T 1sqg_A 234 SAQGCMTWLAPQNG-----EHILDLCAAPGGKTTHILE----VA---P-EAQVVAVDIDEQ-------------RL---- 283 (429)
T ss_dssp HHHTHHHHHCCCTT-----CEEEEESCTTCHHHHHHHH----HC---T-TCEEEEEESSTT-------------TH----
T ss_pred HHHHHHHHcCCCCc-----CeEEEECCCchHHHHHHHH----Hc---C-CCEEEEECCCHH-------------HH----
Confidence 44555566654444 6899999999864333333 21 1 268999987543 12
Q ss_pred HHHHHHHHhcCceEEEEEEecCCCCCCccccccCCCCCEEEEEeecc----ccccCCC----CCchH-------HHHHHH
Q 008559 349 LQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFR----LHHLNHS----TPDER-------TEFLRV 413 (561)
Q Consensus 349 ~rL~~fA~~lgVpFeF~~V~~~~le~L~~~~L~~~~~EaLaVN~~f~----LH~L~~e----s~~~r-------~~~L~~ 413 (561)
..+.+-++.+|+..+|... +..++... +.-..=+.|++|.... +++.++. ++... ..+|+.
T Consensus 284 ~~~~~~~~~~g~~~~~~~~---D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~ 359 (429)
T 1sqg_A 284 SRVYDNLKRLGMKATVKQG---DGRYPSQW-CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 (429)
T ss_dssp HHHHHHHHHTTCCCEEEEC---CTTCTHHH-HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeC---chhhchhh-cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHH
Confidence 4445555667876554332 22222210 1111225777764432 3333221 11111 245554
Q ss_pred -HHhcCCCEEEEE
Q 008559 414 -LRSLEPKGVILS 425 (561)
Q Consensus 414 -IR~L~PkvVvlv 425 (561)
.+-|+|...++.
T Consensus 360 a~~~LkpGG~lvy 372 (429)
T 1sqg_A 360 IWPHLKTGGTLVY 372 (429)
T ss_dssp HGGGEEEEEEEEE
T ss_pred HHHhcCCCCEEEE
Confidence 456899876664
Done!