Your job contains 1 sequence.
>008560
MKAPETDPINLSTQHLSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASNT
LCLDHVHSVSHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSG
VLQDGDVLIKSGVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQE
DDKNVVIAVAQGVVPVLVKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHL
IRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVL
RNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGG
IGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIA
AARAVSMLGINSKARKEMGECGCIGPLIKMLDGKAVEEKESAAKALSTLMLYAGNRKILR
KDERGIVTVVQLLDPLIQNLDKKYPVAILAALVHCRKCRKQMVAAGACLHLRKLVEMDIE
GANKLLESLGRGKIWGVFARP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008560
(561 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 1707 9.6e-176 1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 760 2.1e-75 1
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 604 7.3e-59 1
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species... 603 9.3e-59 1
TAIR|locus:2197654 - symbol:AT1G61350 species:3702 "Arabi... 561 2.6e-54 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 223 2.0e-15 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 207 5.0e-14 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 206 4.6e-13 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 199 1.6e-12 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 181 1.6e-10 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 171 1.8e-10 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 175 8.8e-10 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 164 1.3e-08 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 158 2.5e-08 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 155 3.9e-08 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 158 4.3e-08 1
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 156 1.0e-07 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 153 1.6e-07 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 148 2.7e-07 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 157 4.3e-07 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 147 8.5e-07 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 147 9.0e-07 1
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 146 1.8e-06 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 141 3.6e-06 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 139 5.7e-06 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 139 5.7e-06 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 134 2.7e-05 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 132 3.2e-05 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 133 4.7e-05 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 127 9.4e-05 1
TAIR|locus:2025497 - symbol:ARK2 "armadillo repeat kinesi... 130 9.8e-05 1
ZFIN|ZDB-GENE-030616-533 - symbol:ankar "ankyrin and arma... 130 0.00016 1
TAIR|locus:2087565 - symbol:AT3G20170 species:3702 "Arabi... 121 0.00038 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 119 0.00049 1
UNIPROTKB|A1A5I6 - symbol:ctnnb1 "Ctnnb1 protein" species... 122 0.00059 1
UNIPROTKB|P26233 - symbol:ctnnb1 "Catenin beta" species:8... 122 0.00059 1
UNIPROTKB|Q7ZX35 - symbol:ctnnb1 "Ctnnb1-prov protein" sp... 122 0.00059 1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 125 0.00090 1
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 1707 (606.0 bits), Expect = 9.6e-176, P = 9.6e-176
Identities = 352/562 (62%), Positives = 427/562 (75%)
Query: 1 MKAPETDPINLS-TQHLSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASN 59
M P +D + S T+ ++SL+D IP + FK KW ++ KL DL+TQL DFSDF ++SN
Sbjct: 1 MTVPNSDDGDRSLTEVITSLIDSIPNLLSFKCKWSSIRAKLADLKTQLSDFSDFAGSSSN 60
Query: 60 TLCLDHVHSVSHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKS 119
L +D + SV TL +A +VA +C+G L EGKLKTQS++DSV+A+LDRHV+D +VLIKS
Sbjct: 61 KLAVDLLVSVRETLNDAVAVAARCEGPDLAEGKLKTQSEVDSVMARLDRHVKDAEVLIKS 120
Query: 120 GVLQDGDVLIKSGVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQ 179
G+L D +++ SG S SK+EAVR E+RNL+ RLQIG ESKNSA+DSL+ LLQ
Sbjct: 121 GLLIDNGIVV-SGF------SISSKKEAVRLEARNLVIRLQIGGVESKNSAIDSLIELLQ 173
Query: 180 EDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNH 239
EDDKN +L+DS SL MKEKTVA I+R+SMV+SSKHVLIAEGL LLNH
Sbjct: 174 EDDKNVMICVAQGVVPVLVRLLDSCSLVMKEKTVAVISRISMVESSKHVLIAEGLSLLNH 233
Query: 240 LIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGV 299
L+RVLESGSGFAKE+ACVALQALS SKENARAIG RGGISSLLEICQ G+PGSQAFAAGV
Sbjct: 234 LLRVLESGSGFAKEKACVALQALSLSKENARAIGCRGGISSLLEICQGGSPGSQAFAAGV 293
Query: 300 LRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREG 359
LRNLA F E KENF+EENA+ VL+ +V+SGT+LAQEN GCL NL S DE L + +VREG
Sbjct: 294 LRNLALFGETKENFVEENAIFVLISMVSSGTSLAQENAVGCLANLTSGDEDLMISVVREG 353
Query: 360 GIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRI 419
GI LKS+WDSVS+VKSLEV V LL LA C + EV++S+GF+ RLV VL+CGVL VRI
Sbjct: 354 GIQCLKSFWDSVSSVKSLEVGVVLLKNLALCPIVREVVISEGFIPRLVPVLSCGVLGVRI 413
Query: 420 AAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKIL 479
AAA AVS LG +SK+RKEMGE GCI PLI MLDG LSTL++ NRKI
Sbjct: 414 AAAEAVSSLGFSSKSRKEMGESGCIVPLIDMLDGKAIEEKEAASKALSTLLVCTSNRKIF 473
Query: 480 RKDERGIVTVVQLLDPLIQNLDKKYPVAILAALVHCRKCRKQMVAAGACLHLRKLVEMDI 539
+K ++G+V++VQLLDP I+ LDK+Y V+ L LV +KCRKQ+VAAGACLHL+KLV+MD
Sbjct: 474 KKSDKGVVSLVQLLDPKIKKLDKRYTVSALELLVTSKKCRKQVVAAGACLHLQKLVDMDT 533
Query: 540 EGANKLLESLGRGKIWGVFARP 561
EGA KL E+L R KIWGVF RP
Sbjct: 534 EGAKKLAENLSRSKIWGVFTRP 555
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 191/548 (34%), Positives = 307/548 (56%)
Query: 16 LSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASNTLCLDHVHSVSHTLIE 75
+ S+L + VK F G+W + +K+ + L D S P + N LC + + SV+ TL E
Sbjct: 43 IPSVLSKAKTVKKFTGRWKTIISKIEQIPACLSDLSSHPCFSKNKLCNEQLQSVAKTLSE 102
Query: 76 AASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSGVLQDGDVLIKSGVLQ 135
+A++C EGKL+ QSD+DS+ KLD ++RD VLIK+GVL + + +
Sbjct: 103 VIELAEQCS-TDKYEGKLRMQSDLDSLSGKLDLNLRDCGVLIKTGVLGEATLPL------ 155
Query: 136 DGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXX-XXXXXXX 194
+SS S+ + + + L+ RLQIG ESK++A++SLLG +QED+K
Sbjct: 156 --YISSSSETPKI-SSLKELLARLQIGHLESKHNALESLLGAMQEDEKMVLMPLIGRANV 212
Query: 195 XXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKER 254
+L+ ++S ++EK V I+ ++ LI+EG+L L+R++ESGS KE+
Sbjct: 213 AALVQLLTATSTRIREKAVNLISVLAESGHCDEWLISEGVL--PPLVRLIESGSLETKEK 270
Query: 255 ACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFI 314
A +A+Q LS ++ENAR I GGI+ L+++C+ G SQA +A L+N++ SE+++
Sbjct: 271 AAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGDSVSQAASAAALKNMSAVSELRQLLA 330
Query: 315 EENAVMVLLGLVASGTAL-AQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSA 373
EE + V + L+ G L ++E++ CL NL + ++L+ IV EGG+ SL +Y D
Sbjct: 331 EEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIVSEGGVPSLLAYLDGPLP 390
Query: 374 VKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSK 433
+ A+ L + S P E+ V+ + RL +VL G L + AAA A+ + +
Sbjct: 391 QQPAVTALRNL--IPSVNP--EIWVALNLLPRLRHVLKSGSLGAQQAAASAICRFACSPE 446
Query: 434 ARKEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKILRKDERGIVT-VVQL 492
++ +GE GCI ++K+L+ ++ L+ R+ L+KD + ++T +V L
Sbjct: 447 TKRLVGESGCIPEIVKLLESKSNGCREAAAQAIAGLVAEGRIRRELKKDGKSVLTNLVML 506
Query: 493 LDPLIQNLDKKYPVAILAALVHCRKCRKQMVAAGACLHLRKLVEMDIEGANKLLESLGRG 552
LD N KKY VA L + K +K MV+ GA +L+KL EM++ GA+KLLE L RG
Sbjct: 507 LDSNPGNTAKKYAVAGLLGMSGSEKSKKMMVSYGAIGYLKKLSEMEVMGADKLLEKLERG 566
Query: 553 KIWGVFAR 560
K+ F R
Sbjct: 567 KLRSFFHR 574
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 146/441 (33%), Positives = 247/441 (56%)
Query: 122 LQDGDVLIKSGVLQDGVVSSGSKREAVRAES-RNLITRLQIGSAESKNSAMDSLLGLLQE 180
L+D +L+K+GVL + S + + S R L+ RLQIG ESK A++ L+ +++E
Sbjct: 120 LKDCGLLMKTGVLGEVTKPLSSSTQDLETFSVRELLARLQIGHLESKRKALEQLVEVMKE 179
Query: 181 DDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHL 240
D+K +L+ ++S ++E V I ++ ++ LI+E L L
Sbjct: 180 DEKAVITALGRTNVASLVQLLTATSPSVRENAVTVICSLAESGGCENWLISENAL--PSL 237
Query: 241 IRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVL 300
IR+LESGS AKE+A ++LQ +S S E +R+I GG+ L+EIC+ G SQ+ +A L
Sbjct: 238 IRLLESGSIVAKEKAVISLQRMSISSETSRSIVGHGGVGPLIEICKTGDSVSQSASACTL 297
Query: 301 RNLAGFSEIKENFIEENAVMVLLGLVASGTAL-AQENVFGCLCNLVSDDESLKLLIVREG 359
+N++ E+++N EE V V++ ++ G L ++E CL NL S +E+L+ ++ E
Sbjct: 298 KNISAVPEVRQNLAEEGIVKVMINILNCGILLGSKEYAAECLQNLTSSNETLRRSVISEN 357
Query: 360 GIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRI 419
GI +L +Y D +S A+ L S +++ S LV+VL G + +
Sbjct: 358 GIQTLLAYLDGPLPQESGVAAIRNLVGSVSVETYFKIIPS------LVHVLKSGSIGAQQ 411
Query: 420 AAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKIL 479
AAA + + +++ ++ +GE GCI LI+ML+ +++L+ N + +
Sbjct: 412 AAASTICRIATSNETKRMIGESGCIPLLIRMLEAKASGAREVAAQAIASLVTVPRNCREV 471
Query: 480 RKDERGIVTVVQLLDPLIQNLDKKYPVAILAALVHCRKCRKQMVAAGACLHLRKLVEMDI 539
++DE+ + ++V LL+P N KKY V+ LAAL RKC+K MV+ GA +L+KL E+++
Sbjct: 472 KRDEKSVTSLVMLLEPSPGNSAKKYAVSGLAALCSSRKCKKLMVSHGAVGYLKKLSELEV 531
Query: 540 EGANKLLESLGRGKIWGVFAR 560
G+ KLLE + +GK+ F+R
Sbjct: 532 PGSKKLLERIEKGKLKSFFSR 552
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 130/383 (33%), Positives = 210/383 (54%)
Query: 11 LSTQHLSSL-LDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASNTLCLDHVHSV 69
L Q L + L + VK F +W ++ ++L + T L D S P + +TLC + + +V
Sbjct: 21 LQAQELVPIALSKARTVKGFSSRWRVIISRLEKIPTCLSDLSSHPCFSKHTLCKEQLQAV 80
Query: 70 SHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSGVLQDGDVLI 129
TL E +A C EGKLK QSD+DS+ AK+D ++D +L+K+GVL G+V
Sbjct: 81 LETLKETIELANVCVSEK-QEGKLKMQSDLDSLSAKIDLSLKDCGLLMKTGVL--GEVT- 136
Query: 130 KSGVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXX 189
K S S ++ R L+ RLQIG ESK A++ L+ +++ED+K
Sbjct: 137 KP--------LSSSTQDLETFSVRELLARLQIGHLESKRKALEQLVEVMKEDEKAVITAL 188
Query: 190 XXXXXXXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSG 249
+L+ ++S ++E V I ++ ++ LI+E L LIR+LESGS
Sbjct: 189 GRTNVASLVQLLTATSPSVRENAVTVICSLAESGGCENWLISENAL--PSLIRLLESGSI 246
Query: 250 FAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEI 309
AKE+A ++LQ +S S E +R+I GG+ L+EIC+ G SQ+ +A L+N++ E+
Sbjct: 247 VAKEKAVISLQRMSISSETSRSIVGHGGVGPLIEICKTGDSVSQSASACTLKNISAVPEV 306
Query: 310 KENFIEENAVMVLLGLVASGTAL-AQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYW 368
++N EE V V++ ++ G L ++E CL NL S +E+L+ ++ E GI +L +Y
Sbjct: 307 RQNLAEEGIVKVMINILNCGILLGSKEYAAECLQNLTSSNETLRRSVISENGIQTLLAYL 366
Query: 369 DS-------VSAVKSL--EVAVE 382
D V+A+++L V+VE
Sbjct: 367 DGPLPQESGVAAIRNLVGSVSVE 389
>TAIR|locus:2056529 [details] [associations]
symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
Uniprot:Q8S8G1
Length = 580
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 168/570 (29%), Positives = 296/570 (51%)
Query: 3 APETDPINLSTQHLSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASNTLC 62
AP ++L T LS LL V+ F G+W I+++KL L + L S+ P + N L
Sbjct: 18 APLQPLVDLITNVLSLLLLSSLTVRSFIGRWQILRSKLFTLNSSLSSLSESPHWSQNPLL 77
Query: 63 LDHVHSVSHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSGVL 122
+ S+ L +S++ +C S + GKL QSD+D + L H+ D D+L++SGVL
Sbjct: 78 HTLLPSLLSNLQRLSSLSDQCSSASFSGGKLLMQSDLDIASSSLSTHISDLDLLLRSGVL 137
Query: 123 QDGDVLIKSGVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDD 182
+ ++ S + S ++ + R+L TRLQIG AE K +++SLL LL +++
Sbjct: 138 HQQNAIVLS------LPPPTSDKDDIAFFIRDLFTRLQIGGAEFKKKSLESLLQLLTDNE 191
Query: 183 KNXXXXXXXXXXXXXXKLMDSSSLEM-KEKTVASIARV--SMVDSSKHVLIAEGLLLLNH 239
K+ L+D + +E +A+++ + S DS K V GL
Sbjct: 192 KSARIIAKEGNVGYLVTLLDLHHHPLIREHALAAVSLLTSSSADSRKTVFEQGGL---GP 248
Query: 240 LIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGV 299
L+R+LE+GS K RA +A++A++ A AI + GG++ L+E C++G+ Q AG
Sbjct: 249 LLRLLETGSSPFKTRAAIAIEAITADPATAWAISAYGGVTVLIEACRSGSKQVQEHIAGA 308
Query: 300 LRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVRE- 358
+ N+A EI+ EE A+ VL+ L+ SG++ QE + + S E + LIVRE
Sbjct: 309 ISNIAAVEEIRTTLAEEGAIPVLIQLLISGSSSVQEKTANFISLISSSGEYYRDLIVRER 368
Query: 359 GGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDG-FVVRLVNVLNCGVLSV 417
GG+ L S ++E + LSQ+++ ++ VL S F++RL ++ G + +
Sbjct: 369 GGLQILIHLVQESSNPDTIEHCLLALSQISAMETVSRVLSSSTRFIIRLGELIKHGNVIL 428
Query: 418 RIAAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXX-XXXXXXXXXXLSTLMLYAGNR 476
+ + +S L I+ ++ + +C + LI++++ +L+ NR
Sbjct: 429 QQISTSLLSNLTISDGNKRAVADC--LSSLIRLMESPKPAGLQEAATEAAKSLLTVRSNR 486
Query: 477 KILRKDERGIVTVVQLLDPLIQNLD-KKYPVAILAALVH--CRKCRKQMVAAGACLHLRK 533
K L +DE+ ++ +VQ+LDP + ++ K+ PV ++ A++ R +++ GA +L+
Sbjct: 487 KELMRDEKSVIRLVQMLDPRNERMNNKELPVMVVTAILSGGSYAARTKLIGLGADRYLQS 546
Query: 534 LVEMDIEGANKLLESLGRG-KIWGVF-ARP 561
L EM++ GA K ++ L G ++ +F RP
Sbjct: 547 LEEMEVPGAKKAVQRLAAGNRLKSIFFTRP 576
>TAIR|locus:2197654 [details] [associations]
symbol:AT1G61350 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC004255 EMBL:AY075667 IPI:IPI00545857
PIR:B96639 RefSeq:NP_564774.1 UniGene:At.26275
ProteinModelPortal:O64785 SMR:O64785 PRIDE:O64785
EnsemblPlants:AT1G61350.1 GeneID:842429 KEGG:ath:AT1G61350
TAIR:At1g61350 eggNOG:NOG268378 HOGENOM:HOG000238801
InParanoid:O64785 OMA:GFMPELV PhylomeDB:O64785
ProtClustDB:CLSN2688970 Genevestigator:O64785 Uniprot:O64785
Length = 573
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 162/568 (28%), Positives = 282/568 (49%)
Query: 9 INLSTQHLSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSDFPAAASNTLCLDHVHS 68
I + + +SSL+ +K F KW +++TKL +L + L + + +L + +
Sbjct: 14 IEKAIEAISSLISLSHSIKSFNIKWQLIRTKLQELYSGLDSLRNLNSGFDPSLS-SLISA 72
Query: 69 VSHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSGVLQDGDVL 128
+ +L + +A +C VS + GKL QSD+D + K D H R+ + +G+L G +
Sbjct: 73 ILISLKDTYDLATRCVNVSFS-GKLLMQSDLDVMAGKFDGHTRNLSRIYSAGILSHGFAI 131
Query: 129 IKSGVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXX 188
+ VL+ + + ++ +R R+L+TR++IG E K A+ L ++EDD+
Sbjct: 132 V---VLKP---NGNACKDDMRFYIRDLLTRMKIGDLEMKKQALVKLNEAMEEDDRYVKIL 185
Query: 189 XXXXXXXXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGS 248
S + ++E++ ++ +S S + VLI G++ L+RVLE+G+
Sbjct: 186 IEISDMVNVLVGFLDSEIGIQEESAKAVFFISGFGSYRDVLIRSGVI--GPLVRVLENGN 243
Query: 249 GFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAF--AAGVLRNLAGF 306
G +E + L L+ + ENA ++ + GG+S+LL+IC G + + GVLRNL G
Sbjct: 244 GVGREASARCLMKLTENSENAWSVSAHGGVSALLKICSCSDFGGELIGTSCGVLRNLVGV 303
Query: 307 SEIKENFIEEN-AVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLK 365
EIK IEE+ V + L+ S + Q N L ++ DE + ++VREGGI L
Sbjct: 304 EEIKRFMIEEDHTVATFIKLIGSKEEIVQVNSIDLLLSMCCKDEQTRDILVREGGIQELV 363
Query: 366 SYW---DSVSAVKSLEVAVELLSQL----ASCLPIAEVLVSDGFVVRLVNVLNCGVLSVR 418
S +S+S+ KS E+A+ + L A CL L+ F+ L+N+L G +SV+
Sbjct: 364 SVLSDPNSLSSSKSKEIALRAIDNLCFGSAGCL---NALMGCKFLDHLLNLLRNGEISVQ 420
Query: 419 IAAARAVSML-GINSKARKEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRK 477
+A + S L + + ++ MGE G + L+K LD L L+ NRK
Sbjct: 421 ESALKVTSRLCSLQEEVKRIMGEAGFMPELVKFLDAKSIDVREMASVALYCLISVPRNRK 480
Query: 478 ILRKDERGIVTVVQLLDPLI-QNLDK-----KYPVAILAALVHCRKCRKQMVAAGACLHL 531
+D+ I ++QLLD N+ K+ ++IL +L C R+++ ++G +
Sbjct: 481 KFAQDDFNISYILQLLDHEDGSNVSSDSGNTKFLISILMSLTSCNSARRKIASSGYLKSI 540
Query: 532 RKLVEMDIEGANKLLESLGRGKIWGVFA 559
KL E + A KL++ L + + +
Sbjct: 541 EKLAETEGSDAKKLVKKLSMNRFRSILS 568
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 223 (83.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 86/284 (30%), Positives = 132/284 (46%)
Query: 156 ITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVAS 215
I L+ S K SA L L + N L+ + +E V +
Sbjct: 189 IDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTA 248
Query: 216 IARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSR 275
+ +S+ D +K V+ A G + L+ VL++G+ +K+ A AL +L+ +EN +IG+
Sbjct: 249 LLNLSLHDQNKAVIAAGGAI--KSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGAC 306
Query: 276 GGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVAS-GTALAQ 334
G I L+ + G+ + A L L + KE + AV L+ LVA GT +A
Sbjct: 307 GAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMA- 365
Query: 335 ENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLAS-CLPI 393
E L +L + D+ K IV EGGI +L + S VK E A+ L QL S +
Sbjct: 366 EKAMVVLSSLAAIDDG-KEAIVEEGGIAALVEAIEDGS-VKGKEFAILTLLQLCSDSVRN 423
Query: 394 AEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKE 437
+LV +G + LV + G +SVR A +A +LG + RKE
Sbjct: 424 RGLLVREGAIPPLVGLSQSGSVSVR-AKRKAERLLGYLREPRKE 466
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/235 (24%), Positives = 103/235 (43%)
Query: 155 LITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVA 214
LI L+ ++ A+ +LL L D +N ++ + + K+
Sbjct: 230 LIPLLRCNDPWTQEHAVTALLNLSLHD-QNKAVIAAGGAIKSLVWVLKTGTETSKQNAAC 288
Query: 215 SIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGS 274
++ +++++ +K + A G + L+ +L +GS K+ A L L ++N +
Sbjct: 289 ALLSLALLEENKGSIGACGAI--PPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVT 346
Query: 275 RGGISSLLE-ICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALA 333
G + L++ + + GT G A VL +LA + KE +EE + L+ + G+
Sbjct: 347 AGAVKPLVDLVAEEGT-GMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSVKG 405
Query: 334 QENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVS-AVKSLEVAVELLSQL 387
+E L L SD + L+VREG I L S S +V++ A LL L
Sbjct: 406 KEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYL 460
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 207 (77.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 76/289 (26%), Positives = 138/289 (47%)
Query: 153 RNLITRLQIGSA--ESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKE 210
RNLIT L+ S+ E K +AM+ L L + +N L+ SS L+++E
Sbjct: 63 RNLITHLESSSSIEEQKQAAMEIRL-LSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQE 121
Query: 211 KTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENAR 270
V ++ +S+ D +K ++++ G + L+ L G+ KE A AL LS +EN
Sbjct: 122 YGVTAVLNLSLCDENKEMIVSSGAV--KPLVNALRLGTPTTKENAACALLRLSQVEENKI 179
Query: 271 AIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGT 330
IG G I L+ + + G ++ A+ L +L +E K +E + L+ L+
Sbjct: 180 TIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFE 239
Query: 331 A-LAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLAS 389
+ + ++ F + NL+ K +V EGG+ L ++ + E++V +L QL
Sbjct: 240 SDMVDKSAF--VMNLLMSAPESKPAVVEEGGVPVLVEIVEA-GTQRQKEISVSILLQLCE 296
Query: 390 CLPIAEVLVS-DGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKE 437
+ +V+ +G V LV L+ G S R A +A +++ + + R++
Sbjct: 297 ESVVYRTMVAREGAVPPLV-ALSQGSAS-RGAKVKAEALIELLRQPRQQ 343
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 206 (77.6 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 76/289 (26%), Positives = 127/289 (43%)
Query: 140 SSGSKREAVRAES--RNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXX 197
S+ ++R+ E+ + L+ L+ S +++ A L L + + N
Sbjct: 532 SNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLL 591
Query: 198 XKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACV 257
+L+ S+ +E V ++ +S+ D++K + G + LI VLE+GS AKE +
Sbjct: 592 VELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAI--EPLIHVLENGSSEAKENSAA 649
Query: 258 ALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEEN 317
L +LS +EN IG G I L+++ GTP + AA L NL+ E K ++
Sbjct: 650 TLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSG 709
Query: 318 AVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSL 377
AV L+ L+ + + V L NL + E + I +EGGI L + SA
Sbjct: 710 AVRYLIDLMDPAAGMVDKAV-AVLANLATIPEG-RNAIGQEGGIPLLVEVVELGSARGKE 767
Query: 378 EVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVS 426
A LL + +++ +G V LV + G R A +S
Sbjct: 768 NAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLS 816
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 63/298 (21%), Positives = 135/298 (45%)
Query: 137 GVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXX 196
G ++ +K + R L+ RL S E + +A+ + L + N
Sbjct: 318 GYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPV 377
Query: 197 XXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERAC 256
L+ S + +E + + +S+ +++K +++ G + +++VL +G+ A+E A
Sbjct: 378 LVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAV--TSIVQVLRAGTMEARENAA 435
Query: 257 VALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L +LS + EN IG G I +L+++ + GTP + AA L NL + K +
Sbjct: 436 ATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRA 495
Query: 317 NAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKS 376
V L+ +++ T + + +++++++ K IV+ + +L + ++
Sbjct: 496 GIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQT-DQTRN 554
Query: 377 LEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKA 434
E A +L L+ C E L++ G + +V +++ +A+S+L + KA
Sbjct: 555 RENAAAIL--LSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRKA 610
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 74/305 (24%), Positives = 136/305 (44%)
Query: 140 SSGSKREAVRAES--RNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXX 197
S GS R+ S R L+ +L S E + +A+ + L + N
Sbjct: 329 SDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVL 388
Query: 198 XKLMDSSS-LEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERAC 256
KL+ S E +E V I +S+ + +K +++ G + ++ VL +GS A+E A
Sbjct: 389 VKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAV--TSIVLVLRAGSMEARENAA 446
Query: 257 VALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L +LS + EN IG+ G I +L+++ Q G+ + AA L NL + K +
Sbjct: 447 ATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRA 506
Query: 317 NAVMVLLGLV--ASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAV 374
V L+ ++ +S +A E + + ++++ ++ K I+R I L
Sbjct: 507 GIVKPLVKMLTDSSSERMADEAL--TILSVLASNQVAKTAILRANAIPPLIDCLQK-DQP 563
Query: 375 KSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKA 434
++ E A +L L C E L+S G + +V ++ A +A S+L + K+
Sbjct: 564 RNRENAAAIL--LCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKS 621
Query: 435 RKEMG 439
+++G
Sbjct: 622 SRKLG 626
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 75/294 (25%), Positives = 125/294 (42%)
Query: 273 GSRGGISSLLEICQAGTPG--SQAFAAGVLRNLAGFSEIKENFIEE-NAVMVLLGLVAS- 328
G I +L +C+ + + A +R+L+ S I E A+ VL+ L+ S
Sbjct: 338 GDMSAIRAL--VCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD 395
Query: 329 GTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLA 388
G QEN C+ NL S E K LI+ G + S+ + S +++ E A L L+
Sbjct: 396 GDTETQENAVTCILNL-SIYEHNKELIMLAGAVTSIVLVLRAGS-MEARENAAATLFSLS 453
Query: 389 SCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLI 448
++ + G ++ LV++L G + + AA A+ L I + G + PL+
Sbjct: 454 LADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLV 513
Query: 449 KMLDGXXXXXXXXXXXXLSTLMLYAGNRKILRKDERGIVTVVQLLDPLIQNLDKKYP--- 505
KML L+ L + A N+ + + + PLI L K P
Sbjct: 514 KML--TDSSSERMADEALTILSVLASNQVA-----KTAILRANAIPPLIDCLQKDQPRNR 566
Query: 506 ---VAILAALVHCRKCRKQMVAAGACLHLRKLVEMDIEG-------ANKLLESL 549
AIL L C++ +++++ G + L+E+ +G AN LLE L
Sbjct: 567 ENAAAILLCL--CKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELL 618
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 171 (65.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 72/287 (25%), Positives = 125/287 (43%)
Query: 155 LITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVA 214
L+ L+ GS + K +A + L +N L+ S +E V
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 215 SIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIG- 273
++ +S+ + +K +++ G + L+ VL +G+ AKE + +L +LS + N IG
Sbjct: 537 ALLNLSISELNKAMIVEVGAI--EPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQ 594
Query: 274 SRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALA 333
S I +L+ + GT + AA L NL+ + K ++ AV L+ L+ +
Sbjct: 595 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMV 654
Query: 334 QENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLP- 392
+ V L NL + E + IVREGGI L D + + + E A +L QL P
Sbjct: 655 DKAV-ALLANLSAVGEG-RQAIVREGGIPLLVETVD-LGSQRGKENAASVLLQLCLNSPK 711
Query: 393 IAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMG 439
+++ +G + LV + G + A + +S AR + G
Sbjct: 712 FCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKG 758
Score = 58 (25.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 66 VHSVSHTLIEAASVAQKCQGVSLTEGKLKTQSDIDSVLAKLDRHVRDGDVLIKSGVLQDG 125
V SV + E S Q+ + L E L+ Q D D + LD + + ++ G++ +
Sbjct: 127 VQSVERCVQETESFKQEGTLMELMENALRNQKD-D--ITSLDNNHLES-IIQMLGLISNQ 182
Query: 126 DVLIKS-GVLQDGVVSSGSKREAVRAESRNLI 156
D+L +S V ++ + S SK E ++ LI
Sbjct: 183 DLLKESITVEKERIRSQASKSEEDMEQTEQLI 214
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 14/81 (17%), Positives = 32/81 (39%)
Query: 1 MKAPETDPINLSTQHLSSLLDQIPLVKH---FKGKWVIVKTKLNDLETQLK-DFSDFPAA 56
++ + D +L HL S++ + L+ + K + K ++ ++ + D
Sbjct: 154 LRNQKDDITSLDNNHLESIIQMLGLISNQDLLKESITVEKERIRSQASKSEEDMEQTEQL 213
Query: 57 ASNTLCLDHVHSVSHTLIEAA 77
LC+ H + +E A
Sbjct: 214 IELVLCIRE-HMLKTEFLEVA 233
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 175 (66.7 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 73/284 (25%), Positives = 125/284 (44%)
Query: 132 GVLQDGVVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXX 191
G++ V +GS ++ E + LI L+ S +++ A + L + N
Sbjct: 404 GIIPATVRETGSS-SSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARC 462
Query: 192 XXXXXXXKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGS-GF 250
L+ S+ ++ V + +S+ D++K ++ G ++ LI VL++G
Sbjct: 463 EAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIV--PLIHVLKTGYLEE 520
Query: 251 AKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIK 310
AK + L +LS +E IG G I L+++ +G+ + AA L NL+ E K
Sbjct: 521 AKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENK 580
Query: 311 ENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
IE AV L+ L+ + ++ V L NL + E K+ I EGGI L +
Sbjct: 581 TKVIEAGAVRYLVELMDPAFGMVEKAVV-VLANLATVREG-KIAIGEEGGIPVLVEVVEL 638
Query: 371 VSAVKSLEVAVELLSQLASCLP-IAEVLVSDGFVVRLVNVLNCG 413
SA + E A L QL + P ++ +G + LV + G
Sbjct: 639 GSA-RGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSG 681
Score = 138 (53.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 65/247 (26%), Positives = 105/247 (42%)
Query: 140 SSGSKREAVRAES-RNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXX 198
S+ ++ R E+ +L++ L + A+ LL L +D N
Sbjct: 452 STDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNL-SINDNNKSLIAESGAIVPLI 510
Query: 199 KLMDSSSLE-MKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACV 257
++ + LE K + A++ +S+++ K + G + L+ +L SGS K+ A
Sbjct: 511 HVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAI--EPLVDLLGSGSLSGKKDAAT 568
Query: 258 ALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEEN 317
AL LS EN + G + L+E+ G A VL NLA E K EE
Sbjct: 569 ALFNLSIHHENKTKVIEAGAVRYLVELMDPAF-GMVEKAVVVLANLATVREGKIAIGEEG 627
Query: 318 AVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSL 377
+ VL+ +V G+A +EN L L + ++REG I L + S +A +
Sbjct: 628 GIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTA-RGK 686
Query: 378 EVAVELL 384
E A LL
Sbjct: 687 EKAQNLL 693
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 74/302 (24%), Positives = 131/302 (43%)
Query: 138 VVSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXX 197
V S S EA + E +L+ RL G+ E + SA + L + + N
Sbjct: 342 VSSFSSPAEANKIE--DLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLL 399
Query: 198 XKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACV 257
L+ + ++E +V ++ +S+ +++K +++ G + +++VL+ GS A+E A
Sbjct: 400 VGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAI--PGIVQVLKKGSMEARENAAA 457
Query: 258 ALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEEN 317
L +LS EN IG+ G I L+ + GT + AA L NL + K I
Sbjct: 458 TLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAG 517
Query: 318 AVMVLLGLVAS-GTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKS 376
+ L L+ G+ + E L L S E K +I + SL + + S ++
Sbjct: 518 VIPTLTRLLTEPGSGMVDE-ALAILAILSSHPEG-KAIIGSSDAVPSLVEFIRTGSP-RN 574
Query: 377 LEVAVELLSQLASCLPIAEVLVSD-GFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKAR 435
E A +L L S P V G + L+++ G + AA+ + + ++ +
Sbjct: 575 RENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQ 634
Query: 436 KE 437
KE
Sbjct: 635 KE 636
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 106/216 (49%)
Query: 155 LITRLQIGSAESKN-SAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTV 213
L++ L+ S ES + +A+ +LL L +D+KN + S+S ++E
Sbjct: 109 LVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYAS 168
Query: 214 ASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIG 273
AS+ +S ++K ++ A G++ L L++V++ GS AK A +AL LS +N I
Sbjct: 169 ASLLTLSASANNKPIIGANGVVPL--LVKVIKHGSPQAKADAVMALSNLSTLPDNLSMIL 226
Query: 274 SRGGISSLLEICQAGTPGSQAF--AAGVLRNL-AGFSEIKENFI-EENAVMVLLGLVASG 329
+ +S +L + ++ S+ ++ L E + + +E V+ ++ ++ +G
Sbjct: 227 ATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENG 286
Query: 330 TALAQENVFGCLCNLVSDDES-LKLLIVREGGIGSL 364
+ A+E+ G L L D S + I+REG I L
Sbjct: 287 SLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGL 322
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 210 EKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENA 269
E + ++ +++ D V I E L +I L+S S +E A +L LS S N
Sbjct: 123 EAALLALLNLAVKDEKNKVSIIEAGAL-EPIINFLQSNSPTLQEYASASLLTLSASANNK 181
Query: 270 RAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASG 329
IG+ G + L+++ + G+P ++A A L NL+ + + + +L L+ S
Sbjct: 182 PIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSS 241
Query: 330 TALAQENVFGC-LCN--LVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQ 386
++ + C L +VS +E+ L+ EGG+ ++ ++ S +++ E AV +L
Sbjct: 242 KKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGS-LQAREHAVGVLLT 300
Query: 387 LASC--LPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGEC--- 441
L E ++ +G + L+ + G RI A R + +L + R E+
Sbjct: 301 LCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIE 360
Query: 442 GCIGPLIKMLDG 453
+ LI +DG
Sbjct: 361 NIVSSLISHIDG 372
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 60/235 (25%), Positives = 102/235 (43%)
Query: 155 LITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVA 214
LI+ + + + + ++L L D+N + + + KE
Sbjct: 110 LISLISSSDLQLQEYGVTAILNL-SLCDENKESIASSGAIKPLVRALKMGTPTAKENAAC 168
Query: 215 SIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENA-RAIG 273
++ R+S ++ +K + G + L L+ +LE+G AK+ A AL +L +KEN RA+
Sbjct: 169 ALLRLSQIEENKVAIGRSGAIPL--LVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQ 226
Query: 274 SRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALA 333
S G + L+E+ +A V+ L E K +EE V VL+ +V GT
Sbjct: 227 S-GIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQ 285
Query: 334 QENVFGCLCNLVSDDESLKLLIVREGGIGSLK--SYWDSVSAVKSLEVAVELLSQ 386
+E L L + + ++ REG I L S + A + E +ELL Q
Sbjct: 286 KEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQ 340
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 201 MDSS-SLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVAL 259
+DSS S++ +++ I +S + IA+ + LI ++ S +E A+
Sbjct: 71 LDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAI-KPLISLISSSDLQLQEYGVTAI 129
Query: 260 QALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAV 319
LS EN +I S G I L+ + GTP ++ AA L L+ E K A+
Sbjct: 130 LNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAI 189
Query: 320 MVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEV 379
+L+ L+ +G A+++ L +L S E+ K+ V+ G + L + ++
Sbjct: 190 PLLVNLLETGGFRAKKDASTALYSLCSAKEN-KIRAVQSGIMKPLVELMADFGS-NMVDK 247
Query: 380 AVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEM- 438
+ ++S L S +V +G V LV ++ G + A + L S + M
Sbjct: 248 SAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMV 307
Query: 439 GECGCIGPLIKM 450
G I PL+ +
Sbjct: 308 AREGAIPPLVAL 319
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 52/219 (23%), Positives = 99/219 (45%)
Query: 236 LLNHLIRVLESGSGFAKER-ACVALQALSFSK-ENARAIGSRGGISSLLEICQAGTPGSQ 293
L+NHL+ L+S +++ A + ++ LS +K EN I G I L+ + + Q
Sbjct: 63 LINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQ 122
Query: 294 AFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKL 353
+ + NL+ E KE+ A+ L+ + GT A+EN C +S E K+
Sbjct: 123 EYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENA-ACALLRLSQIEENKV 181
Query: 354 LIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCG 413
I R G I L + ++ ++ + A L L S V G + LV ++
Sbjct: 182 AIGRSGAIPLLVNLLET-GGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADF 240
Query: 414 VLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKMLD 452
++ +A +S+L +++ + E G + L+++++
Sbjct: 241 GSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVE 279
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 53/211 (25%), Positives = 98/211 (46%)
Query: 151 ESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKE 210
E L+T+L+ A+ S+ + + D+ + L+ S ++
Sbjct: 229 EEEALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQV 288
Query: 211 KTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENAR 270
A + +S+ S+K ++ G++ LI VL+ GS A+E + + +L+ EN
Sbjct: 289 NVTAVLVNLSLEKSNKVKIVRSGIV--PPLIDVLKCGSVEAQEHSAGVIFSLALEDENKT 346
Query: 271 AIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGT 330
AIG GG+ LL + + GT ++ +A L +L+ + ++ AV +LLG+V+ G
Sbjct: 347 AIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQ 406
Query: 331 ALAQENVFGCLCNLVSDDESLKLLIVREGGI 361
+ + V LCN+ S S L+ GG+
Sbjct: 407 MIGR--VLLILCNMASCPVSRPALL-DSGGV 434
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 64/255 (25%), Positives = 118/255 (46%)
Query: 207 EMKEKTVASIARVSMVDSSKHVLIAEGLL--LLNHLIRVLESGSGFAKE----RACVALQ 260
E+++ + ++ +++ + +++ +G L L+N L R + S A RA A+
Sbjct: 122 EVEKGSAFALGLLAIKPEYQKLIVDKGALPHLVNLLKRNKDGSSSRAVNSVIRRAADAIT 181
Query: 261 ALSFSKENARA-IGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE-NA 318
L+ + + + GGI L+E+ + Q AAG LR LA ++ +N I E NA
Sbjct: 182 NLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQIVECNA 241
Query: 319 VMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLE 378
+ L+ ++ S A G + NLV +K ++ G + + S E
Sbjct: 242 LPTLILMLGSEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPESQRE 301
Query: 379 VAVELLSQLASCLPIAEV-LVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKE 437
A+ LL Q AS +V +V G V L+ +L + ++ +A A+ L ++ +
Sbjct: 302 AAL-LLGQFASTDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGRLAQDAHNQAG 360
Query: 438 MGECGCIGPLIKMLD 452
+ G +GPL+K+LD
Sbjct: 361 IAHSGGLGPLLKLLD 375
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 84/374 (22%), Positives = 147/374 (39%)
Query: 164 AESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARVSMVD 223
A+++ A+ LLG L+ DK+ L+ S +L ++ + A ++
Sbjct: 21 ADNEREAVTLLLGYLE--DKDQLDFYSGGPLKALTTLVYSDNLNLQRSAALAFAEIT--- 75
Query: 224 SSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLE 283
K+V +L LI +L+S + AC AL L+ + EN I GG+ L+
Sbjct: 76 -EKYVRQVSREVLEPILI-LLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLIN 133
Query: 284 ICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCN 343
Q A G + NLA + K A++ L L S Q N G L N
Sbjct: 134 QMMGDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLN 193
Query: 344 LVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDG-- 401
+ +E+ K L V G + L S S LS +A + L
Sbjct: 194 MTHSEENRKEL-VNAGAVPVLVSLLSSTDPDVQY-YCTTALSNIAVDEANRKKLAQTEPR 251
Query: 402 FVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXXXXXXX 461
V +LV++++ V+ A A+ L ++ + E+ G + L+K++
Sbjct: 252 LVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLA 311
Query: 462 XXXXLSTLMLYAGNRKILRKDERGIVTVVQLLDPLIQNLDKKYPVAILAALV-HCRKCRK 520
+ + ++ N ++ D + +V+LLD + + V+ L L K RK
Sbjct: 312 SVACIRNISIHPLNEGLI-VDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRK 370
Query: 521 QMVAAGACLHLRKL 534
+ +GA ++L
Sbjct: 371 EFFESGAVEKCKEL 384
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 306 FSEIKENFIEENAVMVL---LGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIG 362
F+EI E ++ + + VL L L+ S Q L NL ++E+ KLLIV GG+
Sbjct: 71 FAEITEKYVRQVSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLLIVEMGGLE 129
Query: 363 SL--KSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIA 420
L + D+V + AV ++ LA+ + + G ++ L + + V+
Sbjct: 130 PLINQMMGDNVEVQCN---AVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRN 186
Query: 421 AARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKILR 480
A A+ + + + RKE+ G + L+ +L LS + + NRK L
Sbjct: 187 ATGALLNMTHSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 246
Query: 481 KDERGIVT-VVQLLDPLIQNLDKKYPVAILAALVHCRKCRKQMVAAGACLHLRKLVEMD 538
+ E +V+ +V L+D + + +A L L + ++V AG HL KL++ D
Sbjct: 247 QTEPRLVSKLVSLMDSPSSRVKCQATLA-LRNLASDTSYQLEIVRAGGLPHLVKLIQSD 304
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 143 SKREAVRAESRNLITRL--QIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKL 200
+++E ++S+ LI+ L Q S SK ++ L+ L + D
Sbjct: 85 TQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAVRAALDC 144
Query: 201 MDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQ 260
+DS + ++EK+++ + +S+ D +K L+A+G++ ++ VL GS K A L
Sbjct: 145 VDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVI--RRIVTVLRVGSPDCKAIAATLLT 202
Query: 261 ALSFSKENARAIGSR-GGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAV 319
+L+ + N IGS IS+L+ + + G + +A L L F + ++ ++ +V
Sbjct: 203 SLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSV 262
Query: 320 MVLLGLVASGTALAQENVFGCL 341
+L+ SG A E V G L
Sbjct: 263 PILVEAADSGLERAVE-VLGLL 283
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 59/216 (27%), Positives = 99/216 (45%)
Query: 203 SSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQAL 262
SSS K +++ + R++ DSS + E + + ++S + +E++ L L
Sbjct: 105 SSSNASKLESLTRLVRLTKRDSSIRRKVTESGAV-RAALDCVDSCNQVLQEKSLSLLLNL 163
Query: 263 SFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE--NAVM 320
S +N + + G I ++ + + G+P +A AA +L +LA E+ + I +A+
Sbjct: 164 SLEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLA-VVEVNKATIGSYPDAIS 222
Query: 321 VLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVA 380
L+ L+ G ++ L L S ++ K +V G + L DS LE A
Sbjct: 223 ALVSLLRVGNDRERKESATALYALCSFPDNRKR-VVDCGSVPILVEAADS-----GLERA 276
Query: 381 VELLSQLASCLPIAEVLVS-DGFVVRLVNVLNCGVL 415
VE+L L C E + GFV LVNVL G L
Sbjct: 277 VEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNL 312
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 157 (60.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 149 RAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEM 208
RA L+++L E + SA L L + + N L+ SS L
Sbjct: 366 RANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRT 425
Query: 209 KEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKEN 268
+E V ++ +S+ + +K +I+ G + ++ VL++GS A+E A L +LS E
Sbjct: 426 QEHAVTALLNLSIHEDNKASIISSGAV--PSIVHVLKNGSMEARENAAATLFSLSVIDEY 483
Query: 269 ARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVAS 328
IG G I +L+ + G+ + AA L NL + K I V +++GLV +
Sbjct: 484 KVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 329 GTALAQENVFGCLCNLVSDDE 349
T + L L S E
Sbjct: 544 PTGALMDEAMAILSILSSHPE 564
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 44 ETQLKDFSDFPAAASNTLCLDHVHSVSHTLIEAASVAQKCQGVSL 88
E L +D AA L L S ++E SV +K QGV L
Sbjct: 84 ERALAPLADALEAALALLRLGREGSRISLVLERDSVMKKFQGVIL 128
Score = 37 (18.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 16 LSSLLDQIPLVKHFKGKWVIVKTKLNDLETQLKDFSD 52
+S +L++ ++K F+G + ++ L D+ D SD
Sbjct: 110 ISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISD 146
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 147 (56.8 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 47/198 (23%), Positives = 89/198 (44%)
Query: 139 VSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXX 198
+ S + R +L+ +L G+ E + +A L L + + N
Sbjct: 334 IGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLV 393
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
+L+ S +E +V ++ +S+ + +K ++ G + ++ VL++GS A+E A
Sbjct: 394 ELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAI--TDIVEVLKNGSMEARENAAAT 451
Query: 259 LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENA 318
L +LS EN AIG+ G I +L+ + + GT + AA + NL + K ++
Sbjct: 452 LFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGI 511
Query: 319 VMVLLGLVA-SGTALAQE 335
V L L+ +G + E
Sbjct: 512 VDPLTRLLKDAGGGMVDE 529
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 51/220 (23%), Positives = 95/220 (43%)
Query: 139 VSSGSKREAVRAES-RNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXX 197
++ G+K V A + +++ L+ GS E++ +A +L L D+N
Sbjct: 416 INEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSL-SVIDENKVAIGAAGAIQAL 474
Query: 198 XKLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACV 257
L++ + K+ +I + + +K + G++ + L R+L+ G + A
Sbjct: 475 ISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIV--DPLTRLLKDAGGGMVDEALA 532
Query: 258 ALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE- 316
L LS ++E AI I L+EI + G+P ++ AA +L L + + N E
Sbjct: 533 ILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREV 592
Query: 317 NAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIV 356
A + L L +GT A+ L L+ E + + V
Sbjct: 593 GADVALKELTENGTDRAKRKA-ASLLELIQQTEGVAVTTV 631
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 147 (56.8 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 60/253 (23%), Positives = 110/253 (43%)
Query: 139 VSSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXX 198
VS S+ E + E L+ L E + ++ + L +E+ +N
Sbjct: 369 VSPDSQNEQ-KDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLV 427
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
+L+ ++E V ++ +S+ + +K ++ EG + ++I +LE+G+ A+E + A
Sbjct: 428 QLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAI--PNIIEILENGNREARENSAAA 485
Query: 259 LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENA 318
L +LS EN IG GI L+++ Q GT + A L NL+ S K I+
Sbjct: 486 LFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGI 545
Query: 319 VMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSV--SAVKS 376
V LL L+ + L L S E + + G + +++ + + K+
Sbjct: 546 VQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAI----GQLSFIETLVEFIRQGTPKN 601
Query: 377 LEVAVELLSQLAS 389
E A +L +L S
Sbjct: 602 KECATSVLLELGS 614
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 65/227 (28%), Positives = 103/227 (45%)
Query: 240 LIRVLESGSGFAKERACVALQA-LSFSKENA-------RAIGSRGGISSLLEICQAGTPG 291
L+ +++S +ER+ L + ENA A+ GGI LLE+ ++ G
Sbjct: 394 LLNLMQSSQEDVQERSATGLATFVVVDDENASIDCGRAEAVMKDGGIRLLLELAKSWREG 453
Query: 292 SQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESL 351
Q+ AA + NL+ + I ++ EE + +L GL S L E G L NL S E
Sbjct: 454 LQSEAAKAIANLSVNANIAKSVAEEGGIKILAGLAKSMNRLVAEEAAGGLWNL-SVGEEH 512
Query: 352 KLLIVREGGIGSLKSY---WDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVN 408
K I + GG+ +L W + LE A L+ LA+ + + G V LV
Sbjct: 513 KNAIAQAGGVKALVDLIFRWPN-GCDGVLERAAGALANLAADDKCSMEVAKAGGVHALVM 571
Query: 409 VL-NCGVLSVRIAAARAVSML---GINSKARKEMG-ECGCIGPLIKM 450
+ NC V+ AARA++ L G ++ +G E G + L+++
Sbjct: 572 LARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQL 618
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 72/298 (24%), Positives = 121/298 (40%)
Query: 101 SVLAKLDRHV-RDGDVLIKSGVLQDGDVLIK---SGVLQDGVVSSGSKREAVRAESRNLI 156
SV A + + V +G + I +G+ + + L+ +G L + V K +A +
Sbjct: 466 SVNANIAKSVAEEGGIKILAGLAKSMNRLVAEEAAGGLWNLSVGEEHKNAIAQAGGVKAL 525
Query: 157 TRLQIGSAESKNSAMDSLLGLLQE---DDKNXXXXXXXXXXXXXXKLMDSSSLE-MKEKT 212
L + ++ G L DDK L + E ++E+
Sbjct: 526 VDLIFRWPNGCDGVLERAAGALANLAADDKCSMEVAKAGGVHALVMLARNCKYEGVQEQA 585
Query: 213 VASIARVSMV-DSSKH-VLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENAR 270
++A ++ DS+ + + + L L+++ +S ++ A AL LSF +N
Sbjct: 586 ARALANLAAHGDSNNNNAAVGQEAGALEALVQLTKSPHEGVRQEAAGALWNLSFDDKNRE 645
Query: 271 AIGSRGGISSLLEI---CQAGTPGSQAFAAGVLRNLAGFSEIKENFI-EENAVMVLLGLV 326
+I GG+ +L+ + C + G Q AAG L L+ SE I E V L+ L
Sbjct: 646 SISVAGGVEALVALAQSCSNASTGLQERAAGALWGLS-VSEANSVAIGREGGVPPLIALA 704
Query: 327 ASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS-VSAVKSLEVAVEL 383
S E G L NL + + L IV EGG+ +L S VS + A+ L
Sbjct: 705 RSEAEDVHETAAGALWNLAFNPGNA-LRIVEEGGVPALVHLCSSSVSKMARFMAALAL 761
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 64/264 (24%), Positives = 110/264 (41%)
Query: 200 LMDSSSLEMKEKTVASIARVSMVDSSKHVLI---AEGLLL---LNHLIRVLESGSGFAKE 253
LM SS +++E++ +A +VD + AE ++ + L+ + +S +
Sbjct: 397 LMQSSQEDVQERSATGLATFVVVDDENASIDCGRAEAVMKDGGIRLLLELAKSWREGLQS 456
Query: 254 RACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENF 313
A A+ LS + A+++ GGI L + ++ AAG L NL+ E K
Sbjct: 457 EAAKAIANLSVNANIAKSVAEEGGIKILAGLAKSMNRLVAEEAAGGLWNLSVGEEHKNAI 516
Query: 314 IEENAVMVLLGLV---ASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
+ V L+ L+ +G E G L NL +DD+ + + + GG+ +L +
Sbjct: 517 AQAGGVKALVDLIFRWPNGCDGVLERAAGALANLAADDKC-SMEVAKAGGVHALVMLARN 575
Query: 371 VSAVKSLEVAVELLSQLA----SCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVS 426
E A L+ LA S A V G + LV + VR AA A+
Sbjct: 576 CKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQLTKSPHEGVRQEAAGALW 635
Query: 427 MLGINSKARKEMGECGCIGPLIKM 450
L + K R+ + G + L+ +
Sbjct: 636 NLSFDDKNRESISVAGGVEALVAL 659
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 48/211 (22%), Positives = 92/211 (43%)
Query: 154 NLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTV 213
+L+ RL+ G+ + + +A + L + + N L+ SS +E V
Sbjct: 327 SLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAV 386
Query: 214 ASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIG 273
++ +S+ +++K ++ + ++ VL++GS +E A L +LS EN IG
Sbjct: 387 TALLNLSIHENNKASIVDSHAI--PKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIG 444
Query: 274 SRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALA 333
+ G I L+ + G+P + AA + NL + K ++ V+ L+ + T
Sbjct: 445 AAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGM 504
Query: 334 QENVFGCLCNLVSDDESLKLLIVREGGIGSL 364
+ L L + E K++I R I L
Sbjct: 505 IDEALSLLSILAGNPEG-KIVIARSEPIPPL 534
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 85/381 (22%), Positives = 156/381 (40%)
Query: 160 QIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARV 219
Q+ AE++ A+ +LL L+ +++ L+ S +++++ + A +
Sbjct: 19 QLLLAENEREAISALLQYLE--NRSDVDFFSNGPLRALSTLVYSENIDLQRSAALAFAEI 76
Query: 220 SMVDSSK-HVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGI 278
+ D + + + E +L+L L+S + AC AL L+ + EN I GG+
Sbjct: 77 TEKDVREVNRDVLEPILIL------LQSADSEVQRAACGALGNLAVNTENKILIVEMGGL 130
Query: 279 SSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVF 338
L+ + Q A G + NLA + K + A++ L L S Q N
Sbjct: 131 EPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNAT 190
Query: 339 GCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLV 398
G L N+ E+ + L V G + L S + A LS +A + L
Sbjct: 191 GALLNMTHSGENRQEL-VNAGAVPVLVSLLSNEDADVQY-YCTTALSNIAVDEVNRKKLA 248
Query: 399 SDG--FVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXX 456
S V +LV++++ V+ A A+ L +S + E+ G + L+++L
Sbjct: 249 STEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNHQ 308
Query: 457 XXXXXXXXXLSTLMLYAGNRKILRKDERGIVT-VVQLLDPLIQNLDKKYPVAILAALV-H 514
+ + ++ N ++ E G + +V LLD + + V+ L L
Sbjct: 309 PLVLAAVACIRNISIHPLNEALII--EAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAAS 366
Query: 515 CRKCRKQMVAAGACLHLRKLV 535
K R ++AAGA ++LV
Sbjct: 367 SEKNRTALLAAGAVDKCKELV 387
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 85/381 (22%), Positives = 156/381 (40%)
Query: 160 QIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARV 219
Q+ AE++ A+ +LL L+ +++ L+ S +++++ + A +
Sbjct: 19 QLLLAENEREAISALLQYLE--NRSDVDFFSNGPLRALSTLVYSENIDLQRSAALAFAEI 76
Query: 220 SMVDSSK-HVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGI 278
+ D + + + E +L+L L+S + AC AL L+ + EN I GG+
Sbjct: 77 TEKDVREVNRDVLEPILIL------LQSADSEVQRAACGALGNLAVNTENKILIVEMGGL 130
Query: 279 SSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVF 338
L+ + Q A G + NLA + K + A++ L L S Q N
Sbjct: 131 EPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNAT 190
Query: 339 GCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLV 398
G L N+ E+ + L V G + L S + A LS +A + L
Sbjct: 191 GALLNMTHSGENRQEL-VNAGAVPVLVSLLSNEDADVQY-YCTTALSNIAVDEVNRKKLA 248
Query: 399 SDG--FVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXX 456
S V +LV++++ V+ A A+ L +S + E+ G + L+++L
Sbjct: 249 STEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNHQ 308
Query: 457 XXXXXXXXXLSTLMLYAGNRKILRKDERGIVT-VVQLLDPLIQNLDKKYPVAILAALV-H 514
+ + ++ N ++ E G + +V LLD + + V+ L L
Sbjct: 309 PLVLAAVACIRNISIHPLNEALII--EAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAAS 366
Query: 515 CRKCRKQMVAAGACLHLRKLV 535
K R ++AAGA ++LV
Sbjct: 367 SEKNRTALLAAGAVDKCKELV 387
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 75/317 (23%), Positives = 130/317 (41%)
Query: 140 SSGSKREAVRAESRNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXK 199
SS + EA +A +R L+ L+ GS K A + L + +N +
Sbjct: 389 SSRAAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCR 448
Query: 200 LMDSSSLEMKEKTVASIARVSMVDSSK-HVLIAEGLLLLNHLIRVLESG-SGFAKERACV 257
L+ S+ +E V ++ +S+ + +K ++ EG L L ++ VL++G + AKE A
Sbjct: 449 LLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRL--IVGVLQNGWTTEAKENAAA 506
Query: 258 ALQALSFSKENARAIGSR-GGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L +LS + I + G + L + GT + A L NL+ E +E
Sbjct: 507 TLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLES 566
Query: 317 NAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKS 376
AV+ L+ + + T E G L L+ + L+ E I SL K
Sbjct: 567 CAVVALIQSLRNDTV--SEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRR-GTPKG 623
Query: 377 LEVAVELLSQLASCLPIAEVLVSDGFVVRLVN-VLNCGVLSVRIAAARAVSMLGINSKAR 435
E AV L ++ C LV + +N V+ L+ A + S++ + R
Sbjct: 624 KENAVSALYEI--CRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLI-VKMCQR 680
Query: 436 KEMGECGCIGPLIKMLD 452
+M +G + ++D
Sbjct: 681 SQMPSAMALGSTLTVVD 697
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 82/376 (21%), Positives = 142/376 (37%)
Query: 164 AESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEK-TVASIARVSMV 222
A+++ A+ LLG L+ + D+ L+ T A I +
Sbjct: 42 ADNEREAVSDLLGYLENRAETDFFSGEPLRALSTLVYSDNVDLQRSASLTFAEITERDVR 101
Query: 223 DSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLL 282
+ + L E +L L L+S + A AL L+ + +N I + GG++ L+
Sbjct: 102 EVDRDTL--EPILFL------LQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLI 153
Query: 283 EICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLC 342
+ + Q A G + NLA + K A+ L+ L S Q N G L
Sbjct: 154 KQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLIRLAKSKDMRVQRNATGALL 213
Query: 343 NLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVS--D 400
N+ D++ + L V G I L S S V LS +A + L
Sbjct: 214 NMTHSDDNRQQL-VNAGAIPVLVQLLSS-SDVDVQYYCTTALSNIAVDASNRKRLAQTES 271
Query: 401 GFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKMLDGXXXXXXX 460
V LV++++ V+ AA A+ L + K + E+ + PL+++L
Sbjct: 272 RLVQSLVHLMDSSTPKVQCQAALALRNLASDEKYQLEIVRAKGLPPLLRLLQSSYLPLIL 331
Query: 461 XXXXXLSTLMLYAGNRKILRKDERGIVTVVQLLDPLIQNLDKKYPVAILAALVHCRKCRK 520
+ + ++ N + D + +V LL + + ++ L L K
Sbjct: 332 SAVACIRNISIHPLNESPII-DAGFLKPLVDLLGSTDNEEIQCHAISTLRNLAASSDRNK 390
Query: 521 QMVA-AGACLHLRKLV 535
++V AGA + LV
Sbjct: 391 ELVLQAGAVQKCKDLV 406
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 133 (51.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 70/255 (27%), Positives = 109/255 (42%)
Query: 212 TVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQA-LSFSKENA- 269
T+ IA S + +G LL + +++S +ERA L + ENA
Sbjct: 360 TLLRIAESSNSQGLNDFWLNQGATLL---LSLMQSAQEDVQERAATGLATFIVVDDENAS 416
Query: 270 ------RAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLL 323
A+ GGI LLE+ ++ G Q+ AA + NL+ +++ + EE + VL
Sbjct: 417 IDCGRAEAVMRDGGIRLLLELAKSWREGLQSEAAKAIANLSVNAKVAKAVAEEGGISVLA 476
Query: 324 GLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSY---WDSVSAVKSLEVA 380
L S L E G L NL S E K I + GG+ +L W LE A
Sbjct: 477 DLAKSMNRLVAEEAAGGLWNL-SVGEEHKNAIAQAGGVNALVDLIFRWPH-GCDGVLERA 534
Query: 381 VELLSQLASCLPIAEVLVSDGFVVRLVNVL-NCGVLSVRIAAARAVSML---GINSKARK 436
L+ LA+ + + G V LV + NC + AARA++ L G ++
Sbjct: 535 AGALANLAADDKCSMEVARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNA 594
Query: 437 EMG-ECGCIGPLIKM 450
+G E G + L+++
Sbjct: 595 AVGQEAGALEALVQL 609
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 65/264 (24%), Positives = 112/264 (42%)
Query: 200 LMDSSSLEMKEKTVASIARVSMVDSSKHVLI---AEGLLL---LNHLIRVLESGSGFAKE 253
LM S+ +++E+ +A +VD + AE ++ + L+ + +S +
Sbjct: 388 LMQSAQEDVQERAATGLATFIVVDDENASIDCGRAEAVMRDGGIRLLLELAKSWREGLQS 447
Query: 254 RACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENF 313
A A+ LS + + A+A+ GGIS L ++ ++ AAG L NL+ E K
Sbjct: 448 EAAKAIANLSVNAKVAKAVAEEGGISVLADLAKSMNRLVAEEAAGGLWNLSVGEEHKNAI 507
Query: 314 IEENAVMVLLGLV---ASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
+ V L+ L+ G E G L NL +DD+ + + R GG+ +L +
Sbjct: 508 AQAGGVNALVDLIFRWPHGCDGVLERAAGALANLAADDKC-SMEVARAGGVHALVMLARN 566
Query: 371 VSAVKSLEVAVELLSQLA----SCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVS 426
+ E A L+ LA S A V G + LV + V+ AA A+
Sbjct: 567 CKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLTQSPHEGVKQEAAGALW 626
Query: 427 MLGINSKARKEMGECGCIGPLIKM 450
L + K R+ + G + L+ +
Sbjct: 627 NLAFDDKNRESIAAFGGVEALVAL 650
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 69/297 (23%), Positives = 121/297 (40%)
Query: 101 SVLAKLDRHV-RDGDVLIKSGVLQDGDVLIK---SGVLQDGVVSSGSKREAVRAESRNLI 156
SV AK+ + V +G + + + + + + L+ +G L + V K +A N +
Sbjct: 457 SVNAKVAKAVAEEGGISVLADLAKSMNRLVAEEAAGGLWNLSVGEEHKNAIAQAGGVNAL 516
Query: 157 TRLQIGSAESKNSAMDSLLGLLQE---DDKNXXXXXXXXXXXXXXKLMDSSSLE-MKEKT 212
L + ++ G L DDK L + E +E+
Sbjct: 517 VDLIFRWPHGCDGVLERAAGALANLAADDKCSMEVARAGGVHALVMLARNCKYEGAQEQA 576
Query: 213 VASIARVSMV-DSS-KHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENAR 270
++A ++ DS+ + + + L L+++ +S K+ A AL L+F +N
Sbjct: 577 ARALANLAAHGDSNGNNAAVGQEAGALEALVQLTQSPHEGVKQEAAGALWNLAFDDKNRE 636
Query: 271 AIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFI---EENAVMVLLGLVA 327
+I + GG+ +L+ + ++ + S V L G S + N I E + L+ LV
Sbjct: 637 SIAAFGGVEALVALAKSSSNASTGLQERVAGALWGLSVSEANSIAIGHEGGIPPLIALVR 696
Query: 328 SGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS-VSAVKSLEVAVEL 383
S E G L NL S + L IV EGG+ +L S VS + A+ L
Sbjct: 697 SEAEDVHETAAGALWNL-SFNPGNALRIVEEGGVVALVQLCSSSVSKMARFMAALAL 752
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 40/143 (27%), Positives = 73/143 (51%)
Query: 208 MKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKE 267
++ ASI +S+ +K ++ G + L LI VL+SGS A+E AL +L+ +E
Sbjct: 241 VQTNAAASIVNLSLEKPNKLKIVRSGFVPL--LIDVLKSGSTEAQEHVIGALFSLAVEEE 298
Query: 268 NARAIGSRGGISSLLEICQAG-TPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLV 326
N IG G + LL ++ + ++ AA L +L+ + ++ AV ++L ++
Sbjct: 299 NKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMI 358
Query: 327 ASGTALAQENVFGCLCNLVSDDE 349
SG + ++ + LCNL + E
Sbjct: 359 RSGESASR--ILLLLCNLAACSE 379
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 200 LMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLL-LNHLIRVLESGSGFAKERACVA 258
++ S S E +E + ++ +++ + +K V+ G + L H +R ES A++ A +A
Sbjct: 274 VLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESER--ARQDAALA 331
Query: 259 LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENA 318
L LS N + G + +L + ++G S+ +L NLA SE K ++ NA
Sbjct: 332 LYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILL--LLCNLAACSEGKGAMLDGNA 389
Query: 319 VMVLLGLV-----ASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSA 373
V +L+G + A A A+EN G L L + + L G L +S S
Sbjct: 390 VSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESG 449
Query: 374 VKSL-EVAVELLSQL 387
L E A ++L L
Sbjct: 450 SGRLKEKASKILQTL 464
>TAIR|locus:2025497 [details] [associations]
symbol:ARK2 "armadillo repeat kinesin 2" species:3702
"Arabidopsis thaliana" [GO:0003777 "microtubule motor activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0048364
"root development" evidence=IMP] InterPro:IPR000225
InterPro:IPR001752 InterPro:IPR016024 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00514 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50176 SMART:SM00129 SMART:SM00185
EMBL:CP002684 GO:GO:0005524 GO:GO:0005875 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048364 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 UniGene:At.17002
UniGene:At.66839 IPI:IPI00938676 RefSeq:NP_001154301.1
ProteinModelPortal:F4HU83 SMR:F4HU83 PRIDE:F4HU83
EnsemblPlants:AT1G01950.3 GeneID:839306 KEGG:ath:AT1G01950
OMA:IMVRSME Uniprot:F4HU83
Length = 915
Score = 130 (50.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 80/387 (20%), Positives = 158/387 (40%)
Query: 44 ETQLKDFSDFPAAASNTLCLDHVHSVSHTLIEAASVAQ-KCQGVSLTEGKLKTQSDIDSV 102
E QLK F D N + + V EA + KCQ + E K + + S
Sbjct: 433 ERQLKAFDD-DVERINRQAQNRISEVEKNFAEALEKEKLKCQ-MEYMESVKKLEEKLISN 490
Query: 103 LAKLDRHVRDGDVLIKSGVLQDGDVL-IKSGVLQDGVVSSGSKREAVRAESRNLITRLQI 161
+ R+G+V +GV+ + +K + + + ++ E + +S++ L+
Sbjct: 491 QRNHENGKRNGEV---NGVVTASEFTRLKESLENEMKLRKSAEEEVSKVKSQST---LKT 544
Query: 162 GSAESKNSAMDSLLGLLQEDDKNXXXXXXXXXXXXXXKLMDSSSLEMKEKTVASIARVSM 221
S E +++ + L LL ED+ +L+ + E + ++ + + +
Sbjct: 545 RSGEGEDAGITRLQKLL-EDEALQKKKLEEEVTILRSQLVQLT-FEADQISLHCMPSLKI 602
Query: 222 VDSSKHVLIAEGLLLLNHLIRVLE-SGSGFAKERACVALQALSFSKENARAIGSRGGISS 280
+ ++ HVL + L+ SG+ R A ++++ K + + G+
Sbjct: 603 LLNT-HVLFFQMRRCLDRGAPGNSYSGTDSLPSRHSQARESVNGQKAPFATLCEQVGLQK 661
Query: 281 LLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQENVF-G 339
+L++ ++ + A V+ NLA +E +E + LL L+ S V G
Sbjct: 662 ILQLLESDDANIRIHAVKVVANLAAEEANQEKIVEAGGLTSLLMLLRSYEDETVRRVAAG 721
Query: 340 CLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVS 399
+ NL ++ S +L IV +GGI L ++L + ++ L + L S
Sbjct: 722 AIANLAMNEVSQQL-IVDQGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWS 780
Query: 400 DGFVVRLVNVLNCGVLSVRIAAARAVS 426
DG + L+ ++ CG V AR ++
Sbjct: 781 DGGIKALLGMVRCGHPDVLAQVARGIA 807
>ZFIN|ZDB-GENE-030616-533 [details] [associations]
symbol:ankar "ankyrin and armadillo repeat
containing" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR002110 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50088 PROSITE:PS50176 SMART:SM00185
SMART:SM00248 ZFIN:ZDB-GENE-030616-533 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:CT737230 CTD:150709 GeneTree:ENSGT00680000100065
IPI:IPI00758871 RefSeq:NP_001035135.2 UniGene:Dr.85578
Ensembl:ENSDART00000100342 GeneID:368636 KEGG:dre:368636
NextBio:20813084 ArrayExpress:F1QF11 Bgee:F1QF11 Uniprot:F1QF11
Length = 1400
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 77/324 (23%), Positives = 142/324 (43%)
Query: 239 HLIRVLESGSGFAKERACVALQALSFSKENARAI-GSRGGISSLLEICQAGTPGSQAFAA 297
+L+++L +E+ +AL AL+ N + + + G S +L++ + + Q
Sbjct: 954 YLLQLLTVFQLDVREQGAIALWALAGQSLNQQKLMAEQMGYSVILDLLLSPSDKIQYVGC 1013
Query: 298 GVLRNLAGFSEIKEN-FIEENAVMVLLGLVASG-----TALAQENVFGCLC---NLVSDD 348
+ L+ S I +N F EN V L+ L+ T L+ GCLC L ++
Sbjct: 1014 RAVIALSRDSRIHQNGFCRENGVPPLVRLLRGSRTGQKTLLSVIEALGCLCIGVALTTNK 1073
Query: 349 ESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIA------EVLVSDGF 402
S K + RE I +L + + A KS E+ V++ LA C+ + E + F
Sbjct: 1074 NSQKT-VYREQAIPTLL---ELLKAHKSQEIKVQVAQTLA-CVLLGNQKLQREFWEQEDF 1128
Query: 403 VVR-LVNVLNCGVLSVRIAAARAVSMLGINSKA-RKEMGECGCI-GPLIKMLDGXXXXXX 459
+V +LN ++ + A A+S+ NSKA +K + + G I G + +
Sbjct: 1129 SYENIVELLNAENKNISLDAGHALSLFAYNSKAHQKAIRQLGGIPGKIYETFLNSDNETE 1188
Query: 460 XXXXXXLSTLM--LYAGNRKILRKDERGIVTVVQLLDPLIQNLDKKYPVAILAALVHCRK 517
+ ++ + +G+ ++ RG+ +V+LL Q+ +LA+L H R
Sbjct: 1189 KAKAAFQTVVLARVISGSDEVTLT-ARGVTILVELLQS-DQSTTVIITAQLLASLAHMRA 1246
Query: 518 -CRKQMVAAGACLHLRKLVEMDIE 540
+V+ GA HL ++ + E
Sbjct: 1247 GITDAIVSMGATEHLSAHLDSEDE 1270
>TAIR|locus:2087565 [details] [associations]
symbol:AT3G20170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985 PROSITE:PS50176
SMART:SM00185 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AP000383 EMBL:BT030397
IPI:IPI00525028 RefSeq:NP_188652.1 UniGene:At.50207
ProteinModelPortal:Q9LJY1 SMR:Q9LJY1 PaxDb:Q9LJY1 PRIDE:Q9LJY1
ProMEX:Q9LJY1 EnsemblPlants:AT3G20170.1 GeneID:821561
KEGG:ath:AT3G20170 TAIR:At3g20170 eggNOG:NOG301725
HOGENOM:HOG000153032 InParanoid:Q9LJY1 OMA:KCLWSLV PhylomeDB:Q9LJY1
ProtClustDB:CLSN2684731 Genevestigator:Q9LJY1 Uniprot:Q9LJY1
Length = 475
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 48/236 (20%), Positives = 106/236 (44%)
Query: 216 IARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQALSFSKENARAIGSR 275
++ ++ + S+ VL+ G L L+ + G+ ++ERAC A+ + ++ R +
Sbjct: 176 LSALTTIRESRRVLVHSGGL--KFLVEAAKVGNLASRERACHAIGLIGVTRRARRILVEA 233
Query: 276 GGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEENAVMVLLGLVASGTALAQE 335
G I +L+++ + G ++ A L ++ +E E ++ + + L++ + ++
Sbjct: 234 GVIPALVDLYRDGDDKAKLLAGNALGIISAQTEYIRPVTEAGSIPLYVELLSGQDPMGKD 293
Query: 336 NVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAE 395
C L + + +++ E + L++ D+ + + A ++L LA
Sbjct: 294 IAEDVFCILAVAEGNA--VLIAEQLVRILRA-GDNEAKL----AASDVLWDLAGYRHSVS 346
Query: 396 VLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKML 451
V+ G + L+ +L G L R + A+S L N R+ + G I LI+ L
Sbjct: 347 VIRGSGAIPLLIELLRDGSLEFRERISGAISQLSYNENDREAFSDSGMIPILIEWL 402
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 56/226 (24%), Positives = 95/226 (42%)
Query: 238 NHLIRVLESGSGFAKERACVALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAA 297
N + SGS + R+ + L L+ + + ++ LL + QA AA
Sbjct: 23 NRFENAISSGSASIRVRSVLKLSDLTNRVPESYISRAIPILAGLLRVSDDSNRSVQAAAA 82
Query: 298 GVLRNLAGFSEIKENFIEE----NAVMVLLGLVASGTALAQENVFG-----CLCNLVSDD 348
L+ + + F + LLGL+ A NVF CL +LV+
Sbjct: 83 HCLKCITCCGGEESGFAVTMGRCGVIASLLGLLLE--ANTDGNVFRRIWVKCLWSLVTFG 140
Query: 349 ESLKLLIVREGGIGSLKSYWDSVSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVN 408
S+++ + R GG+ + ++ S +E+LS L + VLV G + LV
Sbjct: 141 SSIRVGLARLGGLEIVIRELNNWEDDGSRWYLLEILSALTTIRESRRVLVHSGGLKFLVE 200
Query: 409 VLNCGVLSVRIAAARAVSMLGINSKARKEMGECGCIGPLIKML-DG 453
G L+ R A A+ ++G+ +AR+ + E G I L+ + DG
Sbjct: 201 AAKVGNLASRERACHAIGLIGVTRRARRILVEAGVIPALVDLYRDG 246
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 50/208 (24%), Positives = 98/208 (47%)
Query: 133 VLQDGVVSSGSKREAVRAES-RNLITRLQIGSAESKNSAMDSLLGLLQEDDKNXXXXXXX 191
+L V + +K E V+A + LI L++ +A + A ++L L N
Sbjct: 114 LLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAIL-TLSAAPANKAMIISS 172
Query: 192 XXXXXXXKLMDSSSLEMKEKTVASIARVSMV-DSSKHVLIAEGLLLLNHLIRVLESGSGF 250
+++ S +++ K V ++ +S + S +L A+ + L HL++ + S F
Sbjct: 173 GVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKF 232
Query: 251 AKERACVALQALSFSKENARAIGS-RGGISSLLEICQAGTPGSQAFAAGVLRNL--AGFS 307
A++ + LS S++ AI S GI +L+E + G+P S A G L +L +
Sbjct: 233 AEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRD 292
Query: 308 EIKENFIEENAVMVLLGLVASGTALAQE 335
+ ++ ++E A+ LL GT+ +++
Sbjct: 293 KYRKLILKEGAIPGLLSSTVDGTSKSRD 320
>UNIPROTKB|A1A5I6 [details] [associations]
symbol:ctnnb1 "Ctnnb1 protein" species:8355 "Xenopus
laevis" [GO:0045296 "cadherin binding" evidence=IDA]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0045296 InterPro:IPR013284 PRINTS:PR01869 HOVERGEN:HBG000919
EMBL:BC128668 UniGene:Xl.1639 ProteinModelPortal:A1A5I6 SMR:A1A5I6
Uniprot:A1A5I6
Length = 780
Score = 122 (48.0 bits), Expect = 0.00059, P = 0.00059
Identities = 61/296 (20%), Positives = 120/296 (40%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H ++ ++ + ++R +++ + R C A
Sbjct: 157 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMV-SAIVRTMQNTNDVETAR-CAA 214
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIE- 315
L LS +E AI GGI +L+++ + +A L NL E + +
Sbjct: 215 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRL 274
Query: 316 ENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVK 375
+ ++ L+ CL L ++ KL+I+ GG +L + + S K
Sbjct: 275 AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYSYEK 334
Query: 376 SLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKAR 435
L +L L+ C +V G + L L+ S R+ ++ ++ A
Sbjct: 335 LLWTTSRVLKVLSVCSSNKPAIVEAGGMQALG--LHLTDSSQRLVQNCLWTLRNLSDAAT 392
Query: 436 KEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKILRKDERGIVTVVQ 491
K+ G G +G L+++L LS L K++ GI +V+
Sbjct: 393 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 448
>UNIPROTKB|P26233 [details] [associations]
symbol:ctnnb1 "Catenin beta" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0031076
"embryonic camera-type eye development" evidence=IMP] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045178 "basal part of cell"
evidence=IDA] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016020
GO:GO:0016055 GO:GO:0005856 GO:GO:0007155 GO:GO:0006351
GO:GO:0048738 GO:GO:0045178 GO:GO:0043433 GO:GO:0031076
InterPro:IPR013284 PRINTS:PR01869 HOVERGEN:HBG000919 EMBL:M77013
PIR:S35099 UniGene:Xl.23136 ProteinModelPortal:P26233 SMR:P26233
DIP:DIP-44044N MINT:MINT-138497 PRIDE:P26233
Xenbase:XB-GENE-6254184 Uniprot:P26233
Length = 781
Score = 122 (48.0 bits), Expect = 0.00059, P = 0.00059
Identities = 61/296 (20%), Positives = 120/296 (40%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H ++ ++ + ++R +++ + R C A
Sbjct: 158 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMV-SAIVRTMQNTNDVETAR-CTA 215
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIE- 315
L LS +E AI GGI +L+++ + +A L NL E + +
Sbjct: 216 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRL 275
Query: 316 ENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVK 375
+ ++ L+ CL L ++ KL+I+ GG +L + + S K
Sbjct: 276 AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYSYEK 335
Query: 376 SLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKAR 435
L +L L+ C +V G + L L+ S R+ ++ ++ A
Sbjct: 336 LLWTTSRVLKVLSVCSSNKPAIVEAGGMQALG--LHLTDSSQRLVQNCLWTLRNLSDAAT 393
Query: 436 KEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKILRKDERGIVTVVQ 491
K+ G G +G L+++L LS L K++ GI +V+
Sbjct: 394 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 449
>UNIPROTKB|Q7ZX35 [details] [associations]
symbol:ctnnb1 "Ctnnb1-prov protein" species:8355 "Xenopus
laevis" [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0045743 "positive regulation of fibroblast growth factor
receptor signaling pathway" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
HSSP:Q02248 GO:GO:0060070 KO:K02105 InterPro:IPR013284
PRINTS:PR01869 GO:GO:0048663 GO:GO:0060059 HOVERGEN:HBG000919
GO:GO:0045743 GO:GO:0060219 UniGene:Xl.1639 EMBL:BC045258
RefSeq:NP_001080749.1 ProteinModelPortal:Q7ZX35 SMR:Q7ZX35
GeneID:380441 KEGG:xla:380441 CTD:380441 Xenbase:XB-GENE-487204
Uniprot:Q7ZX35
Length = 781
Score = 122 (48.0 bits), Expect = 0.00059, P = 0.00059
Identities = 61/296 (20%), Positives = 120/296 (40%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H ++ ++ + ++R +++ + R C A
Sbjct: 158 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMV-SAIVRTMQNTNDVETAR-CAA 215
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIE- 315
L LS +E AI GGI +L+++ + +A L NL E + +
Sbjct: 216 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRL 275
Query: 316 ENAVMVLLGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAVK 375
+ ++ L+ CL L ++ KL+I+ GG +L + + S K
Sbjct: 276 AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYSYEK 335
Query: 376 SLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGINSKAR 435
L +L L+ C +V G + L L+ S R+ ++ ++ A
Sbjct: 336 LLWTTSRVLKVLSVCSSNKPAIVEAGGMQALG--LHLTDSSQRLVQNCLWTLRNLSDAAT 393
Query: 436 KEMGECGCIGPLIKMLDGXXXXXXXXXXXXLSTLMLYAGNRKILRKDERGIVTVVQ 491
K+ G G +G L+++L LS L K++ GI +V+
Sbjct: 394 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 449
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 125 (49.1 bits), Expect = 0.00090, P = 0.00090
Identities = 70/261 (26%), Positives = 115/261 (44%)
Query: 203 SSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVALQAL 262
+SS + KE T A + ++ LI + I +L +G+ AK L L
Sbjct: 50 TSSPQDKELTTARLLGIAKGKREARRLIGSYGQAMPLFISMLRNGTTLAKVNVASILCVL 109
Query: 263 SFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNL--AGFSEIK---ENFIEEN 317
K+ + G I LL + ++GT ++ AA + + AG S + FI E
Sbjct: 110 CKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAIYEVSSAGISNDHIGMKIFITEG 169
Query: 318 AVMVL---LGLVASGTALAQENVFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSVSAV 374
V L L L + + + V G L NL D+ L + G+ + S S +
Sbjct: 170 VVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYWRLTLEGSGVDIVVSLLSSDNP- 228
Query: 375 KSLEVAVELLSQL--ASCLPIAEVLVSDGFVVRLVNVLNC-GVLSVRIAAARAVSMLGIN 431
S A LL++L + C I ++L S G V L+ +L ++VR +AA A+ L N
Sbjct: 229 NSQANAASLLARLVLSFCDSIQKILNS-GVVKSLIQLLEQKNDINVRASAADALEALSAN 287
Query: 432 S-KARKEMGECGCIGPLIKML 451
S +A+K + + G + LI+ +
Sbjct: 288 SDEAKKCVKDAGGVHALIEAI 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 561 535 0.00093 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 614 (65 KB)
Total size of DFA: 248 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.29u 0.17s 40.46t Elapsed: 00:00:02
Total cpu time: 40.30u 0.17s 40.47t Elapsed: 00:00:02
Start: Fri May 10 02:05:57 2013 End: Fri May 10 02:05:59 2013