BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008560
(561 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or329
Length = 252
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSS--KHVLIAEGLLLLNHLIRVLESGSGFAKERAC 256
KL+ S+ E +++ +A ++ +S K ++ A G+ +L +++L S ++ A
Sbjct: 9 KLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVL---VKLLTSTDSEVQKEAA 65
Query: 257 VALQALSFSKENA-RAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLA-GFSEIKENFI 314
AL ++ + A +AI GG+ L+++ + Q AA L N+A G E + +
Sbjct: 66 RALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 125
Query: 315 EENAVMVLLGLVASGTALAQENVFGCLCNLVS-DDESLKLLIVREGGI 361
+ V VL+ L+ S + Q+ L N+ S DE++K IV GG+
Sbjct: 126 DAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK-AIVDAGGV 172
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 21 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 78
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 79 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 134
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 135 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 193
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 194 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 251
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 252 SDAATKQEGMEGLLGTLVQLL 272
>pdb|1XM9|A Chain A, Structure Of The Armadillo Repeat Domain Of Plakophilin 1
Length = 457
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 259 LQALSFSKENARA-IGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEI------KE 311
+Q F E+A+ + GGI L+++ ++ Q AAG LRNL S ++
Sbjct: 26 IQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 85
Query: 312 NFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSDDE 349
N I E + L +G A Q+ + G L NL S DE
Sbjct: 86 NGIREAVSL----LRRTGNAEIQKQLTGLLWNLSSTDE 119
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 240 LIRVLESGSGFAKERACVALQALSFSK-----ENARAIGSRGGISSLLEICQAGTPGSQA 294
L+ +L S + ++ A AL+ L F E R G R +S L + G Q
Sbjct: 49 LVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLR---RTGNAEIQK 105
Query: 295 FAAGVLRNLAGFSEIKENFI-------EENAVMVLLGLVASGTALAQE--------NVFG 339
G+L NL+ E+KE I + ++ G + +++E N G
Sbjct: 106 QLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATG 165
Query: 340 CLCNLVSDDESLKLLIVREGGIGSLKSY-WDSVSAVKSLEVAVE 382
CL NL S D + + G I SL +Y + V+A + + +VE
Sbjct: 166 CLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVE 209
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 27 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 84
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 85 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 140
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 141 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 199
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 200 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 257
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 258 SDAATKQEGMEGLLGTLVQLL 278
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 25 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 82
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 83 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 138
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 139 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 197
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 198 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 255
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 256 SDAATKQEGMEGLLGTLVQLL 276
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 22 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 79
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 80 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 135
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 136 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 194
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 195 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 252
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 253 SDAATKQEGMEGLLGTLVQLL 273
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 28 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 85
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 86 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 141
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 142 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 200
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 201 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 258
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 259 SDAATKQEGMEGLLGTLVQLL 279
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 26 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 83
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 84 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 139
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 140 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 198
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 199 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 256
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 257 SDAATKQEGMEGLLGTLVQLL 277
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 9 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 66
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 67 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 122
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 123 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 181
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 182 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 239
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 240 SDAATKQEGMEGLLGTLVQLL 260
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 22 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 79
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 80 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 135
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 136 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 194
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 195 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 252
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 253 SDAATKQEGMEGLLGTLVQLL 273
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 11 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 68
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 69 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 124
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 125 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 183
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 184 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 241
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 242 SDAATKQEGMEGLLGTLVQLL 262
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 26 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 83
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 84 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 139
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 140 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 198
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 199 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 256
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 257 SDAATKQEGMEGLLGTLVQLL 277
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 24 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 81
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 82 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 137
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 138 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 196
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 197 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 254
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 255 SDAATKQEGMEGLLGTLVQLL 275
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 9 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 66
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 67 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 122
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 123 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 181
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 182 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 239
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 240 SDAATKQEGMEGLLGTLVQLL 260
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C A
Sbjct: 13 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTA 70
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+++ + +A L NL E +
Sbjct: 71 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM---- 126
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 127 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 185
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 186 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 243
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 244 SDAATKQEGMEGLLGTLVQLL 264
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+H I +++ ++R +++ + R C +
Sbjct: 157 KLLNDEDQVVVNKAAVMVHQLSKKEASRHA-IMRSPQMVSAIVRTMQNTNDVETAR-CTS 214
Query: 259 --LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEE 316
L LS +E AI GGI +L+ + + A L NL E +
Sbjct: 215 GTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKM---- 270
Query: 317 NAVMVLLGLVASGTALAQENV------FGCLCNLVSDDESLKLLIVREGGIGSLKSYWDS 370
AV + GL L + NV CL L ++ KL+I+ GG +L + +
Sbjct: 271 -AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 329
Query: 371 VSAVKSLEVAVELLSQLASCLPIAEVLVSDGFVVRLVNVLNCGVLSVRIAAARAVSMLGI 430
+ K L +L L+ C +V G + L L+ S R+ ++ +
Sbjct: 330 YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAL--GLHLTDPSQRLVQNCLWTLRNL 387
Query: 431 NSKARKEMGECGCIGPLIKML 451
+ A K+ G G +G L+++L
Sbjct: 388 SDAATKQEGMEGLLGTLVQLL 408
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 13/199 (6%)
Query: 199 KLMDSSSLEMKEKTVASIARVSMVDSSKHVLIAEGLLLLNHLIRVLESGSGFAKERACVA 258
KL++ + K + ++S ++S+ L+ L+ ++R +++ S R +
Sbjct: 26 KLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVA-AVVRTMQNTSDLDTARCTTS 84
Query: 259 -LQALSFSKENARAIGSRGGISSLLEICQAGTPGSQAFAAGVLRNLAGFSEIKENFIEEN 317
L LS +E AI GGI +L+ + + +A L NL + E +
Sbjct: 85 ILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKM----- 139
Query: 318 AVMVLLGLVASGTALAQEN------VFGCLCNLVSDDESLKLLIVREGGIGSLKSYWDSV 371
AV + GL L + N CL L ++ KL+I+ GG +L +
Sbjct: 140 AVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRNY 199
Query: 372 SAVKSLEVAVELLSQLASC 390
S K L +L L+ C
Sbjct: 200 SYEKLLWTTSRVLKVLSVC 218
>pdb|1XQR|A Chain A, Crystal Structure Of The Hspbp1 Core Domain
pdb|1XQR|B Chain B, Crystal Structure Of The Hspbp1 Core Domain
Length = 296
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 296 AAGVLRNL-AGFSEIKENFIEENAVMVLLGLVASGTALAQENVFGCLCNLVSD 347
+A +L+NL G E K V L+ LV + + E+V G LC+LV+D
Sbjct: 187 SAFLLQNLLVGHPEHKGTLCSXGXVQQLVALVRTEHSPFHEHVLGALCSLVTD 239
>pdb|1XQS|A Chain A, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|B Chain B, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 280
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 277 GISSLLEICQAGTPGSQAFAAGVLRNL-AGFSEIKENFIEENAVMVLLGLVASGTALAQE 335
G S L+ Q + +A +L+NL G E K V L+ LV + + E
Sbjct: 152 GFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHE 211
Query: 336 NVFGCLCNLVSD 347
+V G LC+LV+D
Sbjct: 212 HVLGALCSLVTD 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,414,601
Number of Sequences: 62578
Number of extensions: 472597
Number of successful extensions: 1370
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 28
length of query: 561
length of database: 14,973,337
effective HSP length: 104
effective length of query: 457
effective length of database: 8,465,225
effective search space: 3868607825
effective search space used: 3868607825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)