Query         008564
Match_columns 561
No_of_seqs    243 out of 2652
Neff          10.0
Searched_HMMs 46136
Date          Thu Mar 28 13:45:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008564.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008564hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02936 epsilon-ring hydroxyl 100.0 3.2E-78 6.8E-83  631.8  48.6  486   50-555     1-486 (489)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 7.6E-75 1.6E-79  590.1  43.3  448   64-551    25-488 (489)
  3 PLN02738 carotene beta-ring hy 100.0 2.8E-74 6.1E-79  610.5  47.2  462   72-552   134-596 (633)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 3.6E-74 7.8E-79  575.8  40.1  447   66-551    32-499 (499)
  5 KOG0157 Cytochrome P450 CYP4/C 100.0 3.4E-70 7.3E-75  567.7  41.5  456   64-551    34-496 (497)
  6 PLN02971 tryptophan N-hydroxyl 100.0 4.7E-70   1E-74  576.5  42.8  456   65-552    57-535 (543)
  7 PLN02290 cytokinin trans-hydro 100.0 1.2E-69 2.5E-74  572.8  45.3  455   52-551    31-515 (516)
  8 PLN02169 fatty acid (omega-1)- 100.0 1.9E-69 4.2E-74  565.5  43.8  450   66-550    32-499 (500)
  9 PLN03234 cytochrome P450 83B1; 100.0 2.5E-69 5.4E-74  568.3  41.8  452   64-550    27-498 (499)
 10 PLN00110 flavonoid 3',5'-hydro 100.0 3.5E-69 7.7E-74  564.6  42.2  464   54-554    19-500 (504)
 11 PTZ00404 cytochrome P450; Prov 100.0 9.4E-70   2E-74  569.0  37.2  450   59-550    23-482 (482)
 12 PLN03195 fatty acid omega-hydr 100.0 2.2E-68 4.8E-73  562.6  45.3  453   66-551    31-516 (516)
 13 PLN02655 ent-kaurene oxidase   100.0 2.8E-68   6E-73  554.3  44.6  451   67-552     1-465 (466)
 14 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-68 5.2E-73  561.4  44.0  457   65-551    30-502 (503)
 15 PLN00168 Cytochrome P450; Prov 100.0 4.3E-68 9.3E-73  560.0  45.0  463   63-552    33-518 (519)
 16 PLN02687 flavonoid 3'-monooxyg 100.0 3.2E-68 6.8E-73  560.7  42.7  452   66-551    35-509 (517)
 17 PLN02500 cytochrome P450 90B1  100.0 3.9E-68 8.5E-73  557.1  40.3  440   65-550    38-489 (490)
 18 PF00067 p450:  Cytochrome P450 100.0 2.4E-68 5.2E-73  557.7  35.5  445   67-547     1-463 (463)
 19 PLN02966 cytochrome P450 83A1  100.0 1.3E-67 2.7E-72  554.6  40.9  451   63-552    27-499 (502)
 20 PLN02183 ferulate 5-hydroxylas 100.0   1E-67 2.2E-72  556.8  40.0  449   65-550    36-511 (516)
 21 PLN03112 cytochrome P450 famil 100.0 3.1E-67 6.8E-72  554.0  41.3  463   60-552    27-509 (514)
 22 PLN03018 homomethionine N-hydr 100.0 3.6E-66 7.8E-71  542.9  44.7  457   66-551    41-524 (534)
 23 KOG0159 Cytochrome P450 CYP11/ 100.0 2.8E-66   6E-71  506.3  39.2  452   67-551    52-518 (519)
 24 PLN02196 abscisic acid 8'-hydr 100.0   1E-66 2.2E-71  541.8  36.0  422   66-550    36-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.1E-65 2.4E-70  533.1  38.6  439   63-551     5-450 (452)
 26 PLN02774 brassinosteroid-6-oxi 100.0 2.2E-65 4.8E-70  532.1  36.9  422   66-549    32-462 (463)
 27 PLN02987 Cytochrome P450, fami 100.0 2.6E-64 5.6E-69  522.0  40.1  432   65-552    30-470 (472)
 28 PLN02426 cytochrome P450, fami 100.0 1.2E-63 2.5E-68  521.1  44.8  443   69-552    45-501 (502)
 29 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-63 2.3E-68  525.6  41.1  435   65-552    42-489 (490)
 30 KOG0684 Cytochrome P450 [Secon 100.0 8.8E-59 1.9E-63  442.2  28.9  436   67-551    33-485 (486)
 31 PLN02648 allene oxide synthase 100.0 2.8E-56 6.1E-61  458.5  30.6  409   62-528    14-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.5E-50 3.3E-55  411.3  31.2  377   91-550    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  46.5     9.5 0.00021   34.4   1.0   44  404-449    51-94  (200)
 34 PF08492 SRP72:  SRP72 RNA-bind  42.3      18 0.00039   25.3   1.6    8  468-475    44-51  (59)
 35 KOG0114 Predicted RNA-binding   33.4      86  0.0019   24.8   4.2   47   84-130    24-76  (124)
 36 PF12554 MOZART1:  Mitotic-spin  32.7 1.1E+02  0.0025   20.4   4.1   42  331-388     6-47  (48)
 37 PF13893 RRM_5:  RNA recognitio  28.9      83  0.0018   21.2   3.4   35   95-129     1-39  (56)
 38 PF09201 SRX:  SRX;  InterPro:   28.5      47   0.001   27.6   2.2   22  497-518    19-40  (148)
 39 TIGR03779 Bac_Flav_CT_M Bacter  23.7      34 0.00073   34.6   0.7   46  403-450   253-298 (410)
 40 PF11227 DUF3025:  Protein of u  20.5      63  0.0014   29.3   1.7   20  452-471   192-211 (212)
 41 KOG3506 40S ribosomal protein   20.4      47   0.001   22.6   0.6   11  489-499    12-22  (56)

No 1  
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.2e-78  Score=631.76  Aligned_cols=486  Identities=83%  Similarity=1.305  Sum_probs=411.2

Q ss_pred             ccChHHHHHHHhhcccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHh
Q 008564           50 WVSPDWLTSLTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLR  129 (561)
Q Consensus        50 ~~~~~~l~~~~~~~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~  129 (561)
                      |+.+.|++++.++|+    |.+|||++|+.++++..+.++.++..+.+|+++|||||++++|+.+.++++||+++++|+.
T Consensus         1 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~   76 (489)
T PLN02936          1 WVSPDWLTSLNRLWG----DDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLR   76 (489)
T ss_pred             CCCchHHHhhhccCC----CCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHH
Confidence            788999999999999    8999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hCCCccCCchhhHHhHhhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHH
Q 008564          130 NYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEE  209 (561)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~  209 (561)
                      +.+..|.++.........+|.++++.+|+.|+++|+++.+.|+..++..+.++++.++++.+++.+.+....|+++|+.+
T Consensus        77 ~~~~~f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~  156 (489)
T PLN02936         77 NYGSKYAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEA  156 (489)
T ss_pred             hccccccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHH
Confidence            77667877765444444567888889999999999999999999888888756888999999999987665677999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHH
Q 008564          210 KFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELI  289 (561)
Q Consensus       210 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i  289 (561)
                      +++.+++|+++.++||.+++..+.+.++...+...+..........++.+.++++..+.+..++..++.+.+.+++.+++
T Consensus       157 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i  236 (489)
T PLN02936        157 KFSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLV  236 (489)
T ss_pred             HHHHHHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998765555566666655544333333344544444333344555667778888899999999


Q ss_pred             HHHHHHHHhhccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHH
Q 008564          290 IKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFT  369 (561)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~  369 (561)
                      +++++..++........+..++.+.++++.|++..++++.+++.++++++++||+|||+++++|++|+|++|        
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~--------  308 (489)
T PLN02936        237 DKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKN--------  308 (489)
T ss_pred             HHHHHHHhhcccccccccccccCchHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------
Confidence            887765543322111111112345689999998877899999999999999999999999999999999999        


Q ss_pred             hhhhhhhchhHHHHHHHHHHHHhCCCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEE
Q 008564          370 LRNRLLEDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  449 (561)
Q Consensus       370 ~~~~~~~~p~~~~klr~Ei~~~~~~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  449 (561)
                              |++|+|+++|++++++++.++++++++||||+|||+||||++|+++...+|++.+|+.++||.||+|+.|++
T Consensus       309 --------p~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~  380 (489)
T PLN02936        309 --------PEALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMI  380 (489)
T ss_pred             --------HHHHHHHHHHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEe
Confidence                    999999999999999877789999999999999999999999999999999988888889999999999999


Q ss_pred             ecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCcc
Q 008564          450 SVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNI  529 (561)
Q Consensus       450 ~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~  529 (561)
                      +.+++||||++|+||++|+||||+.++...........++|||.|+|.|+|++||++|+++++++|+++|+|++++++++
T Consensus       381 ~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~  460 (489)
T PLN02936        381 SVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDI  460 (489)
T ss_pred             cHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCcc
Confidence            99999999999999999999999854322112223458999999999999999999999999999999999999987776


Q ss_pred             ccccceeeecCCCeeEEEEEecCCCC
Q 008564          530 NMTTGATIHTTNGLYMKLRQRQHLNS  555 (561)
Q Consensus       530 ~~~~~~~~~~~~~~~v~~~~r~~~~~  555 (561)
                      ....+.+..|+.+++|++++|..-.|
T Consensus       461 ~~~~~~~~~~~~~~~v~~~~R~~~~~  486 (489)
T PLN02936        461 VMTTGATIHTTNGLYMTVSRRRVPDG  486 (489)
T ss_pred             ceecceEEeeCCCeEEEEEeeeCCCC
Confidence            65556778888999999999987655


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.6e-75  Score=590.15  Aligned_cols=448  Identities=25%  Similarity=0.361  Sum_probs=368.1

Q ss_pred             ccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchh-hH
Q 008564           64 TITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV-SE  142 (561)
Q Consensus        64 ~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~~  142 (561)
                      .++||||.+||++||    ++++.....|+.+.+|.++|||||.+++|+.++|||+|++++++++++++..|+.++. ..
T Consensus        25 ~~lPPGP~~lPiIGn----l~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGN----LHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             CCCCcCCCCCCcccc----HHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            568999999999999    7766555689999999999999999999999999999999999999999989998875 22


Q ss_pred             HhHhh--cCCceecc-CCchhhhhhcccCcc-cchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHH
Q 008564          143 VSEFL--FGSGFAIA-EGPLWMGRRRAVAPS-LHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDV  218 (561)
Q Consensus       143 ~~~~~--~g~~l~~~-~g~~w~~~Rr~l~~~-f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dv  218 (561)
                      ....+  .+.++.++ +|+.|+.+||+.... ++...++... ..-.++++.+++++.+ ...+++||+...+..++.++
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~-~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM-EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH-HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHH
Confidence            32333  35778888 899999999977555 4666677766 5558888999999987 33337999999999999999


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHh-hhhccc---hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          219 IGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVK-ALCKIV---PRQIKAEKAVTVIRKTVEELIIKCKE  294 (561)
Q Consensus       219 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~  294 (561)
                      |++++||.+++..  +++....+...+.........+.....+| ++.++.   ...++......++..+++..|+++++
T Consensus       179 I~~~~fG~rf~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~  256 (489)
T KOG0156|consen  179 ICRMLFGRRFEEE--DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHRE  256 (489)
T ss_pred             HHHHHhCCccccC--CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999763  33444545666655555444333333333 222222   24455555566689999999999887


Q ss_pred             HHHhhccccCcccccCCCCchHHHHHHhccc----C-CChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHH
Q 008564          295 IVETEGERIDDEEYVNDSDPSILRFLLASRE----E-VSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFT  369 (561)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~----~-~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~  369 (561)
                      .. ..          ++. .|+++.+++..+    + +++++|...+..+++||+|||++|+.|++.+|++|        
T Consensus       257 ~~-~~----------~~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~--------  316 (489)
T KOG0156|consen  257 KI-GD----------EEG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNN--------  316 (489)
T ss_pred             hh-cc----------CCC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhC--------
Confidence            65 11          011 678888887643    2 89999999999999999999999999999999999        


Q ss_pred             hhhhhhhchhHHHHHHHHHHHHhCCCC-CChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEE
Q 008564          370 LRNRLLEDCNSLMKAQEEIDRVLQGRS-PSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIM  448 (561)
Q Consensus       370 ~~~~~~~~p~~~~klr~Ei~~~~~~~~-~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~  448 (561)
                              |++|+|+|+||++++|.+. ++.+|+.+||||+|||+|++|++|++|..++|.+.+|+.++||.|||||.|+
T Consensus       317 --------Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~  388 (489)
T KOG0156|consen  317 --------PEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVL  388 (489)
T ss_pred             --------HHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEE
Confidence                    9999999999999999654 9999999999999999999999999999999999999999999999999999


Q ss_pred             EecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCc
Q 008564          449 ISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN  528 (561)
Q Consensus       449 ~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~  528 (561)
                      ++.|++||||++|+||++|+||||++++   +.......++|||.|+|.|+|..+|.+++.+++|.|+++|+|++..+ .
T Consensus       389 vn~~ai~rDp~vw~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~  464 (489)
T KOG0156|consen  389 VNLWAIHRDPKVWEDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-K  464 (489)
T ss_pred             EeehhhhcCCccCCCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-C
Confidence            9999999999999999999999999763   11226788999999999999999999999999999999999999877 5


Q ss_pred             cccccc-eeeecCCCeeEEEEEec
Q 008564          529 INMTTG-ATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       529 ~~~~~~-~~~~~~~~~~v~~~~r~  551 (561)
                      +++... .+...+.++.+...+|.
T Consensus       465 ~d~~e~~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  465 VDMEEAGLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             CCCcccccceecCCcceeeeecCC
Confidence            554432 55666667777776664


No 3  
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.8e-74  Score=610.52  Aligned_cols=462  Identities=50%  Similarity=0.911  Sum_probs=380.1

Q ss_pred             CCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHhHhhcCCc
Q 008564           72 NIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEFLFGSG  151 (561)
Q Consensus        72 ~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~g~~  151 (561)
                      +.|-++..++++..+.+|.++..+.+||++|||||++++|+.++++|+||+.+++||.+.+..|.++..........+.+
T Consensus       134 ~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~  213 (633)
T PLN02738        134 GYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKG  213 (633)
T ss_pred             ccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCc
Confidence            44555556666777878999999999999999999999999889999999999999987766677765544444456778


Q ss_pred             eeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHHhhcccCCCC
Q 008564          152 FAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSL  231 (561)
Q Consensus       152 l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~~fG~~~~~~  231 (561)
                      +++.+|+.|+.+|+++.+.|+..++..++ +.+.+.++.++++|.+...+|+++|+.+.++.+++|+|+.++||.+++.+
T Consensus       214 l~~~dge~wr~rRr~l~p~Fs~~~v~~l~-~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~  292 (633)
T PLN02738        214 LIPADGEIWRVRRRAIVPALHQKYVAAMI-SLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSL  292 (633)
T ss_pred             eecCCcHHHHHHHHhccHhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccc
Confidence            88899999999999999999999999998 89999999999999876667889999999999999999999999999876


Q ss_pred             CCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccCC
Q 008564          232 TADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERIDDEEYVND  311 (561)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  311 (561)
                      ..++++...+...+..........++.|.++.+..+.+..++..+..+.+.++++.+++.+++..++...... .++...
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~-~~~~~~  371 (633)
T PLN02738        293 SNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFH-EEYMNE  371 (633)
T ss_pred             ccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccch-hccccc
Confidence            5555666666666554433333344445555544444444555666777778888888776654433221111 111123


Q ss_pred             CCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHHHHHHHHHHH
Q 008564          312 SDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLMKAQEEIDRV  391 (561)
Q Consensus       312 ~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~klr~Ei~~~  391 (561)
                      .+.++++.|+++.++++++++.++++.+++||+|||+++|+|++++|++|                |++|+|+|+||+++
T Consensus       372 ~~~dil~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~----------------Pevq~kLreEl~~v  435 (633)
T PLN02738        372 RDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE----------------PSVVAKLQEEVDSV  435 (633)
T ss_pred             ccchHHHHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhC----------------HHHHHHHHHHHHHh
Confidence            35689999998877799999999999999999999999999999999999                99999999999999


Q ss_pred             hCCCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccCCCcCCCCCCCCCCCC
Q 008564          392 LQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPER  471 (561)
Q Consensus       392 ~~~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dP~~F~P~R  471 (561)
                      ++++.++++++++||||+|||+|+|||+|++|.+.|++ .+|..++||.|||||.|.++.|.+||||++|+||++|+|||
T Consensus       436 ~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a-~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PER  514 (633)
T PLN02738        436 LGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRS-LENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPER  514 (633)
T ss_pred             cCCCCCCHHHHccCHHHHHHHHHHHhcCCCccccceee-ccCceECCEEECCCCEEEecHHHHhCCccccCCccccCccc
Confidence            98777999999999999999999999999999977554 67777899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC-ccccccceeeecCCCeeEEEEEe
Q 008564          472 FDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMTTGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       472 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r  550 (561)
                      |+.++...+.......++|||.|+|.|+|++||++|+++++|.|+++|+|++.++. ++.+..+.++.++++++|++++|
T Consensus       515 Wl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        515 WPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             CCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEEC
Confidence            98543222223355689999999999999999999999999999999999998664 45555677888999999999999


Q ss_pred             cC
Q 008564          551 QH  552 (561)
Q Consensus       551 ~~  552 (561)
                      ..
T Consensus       595 ~~  596 (633)
T PLN02738        595 TK  596 (633)
T ss_pred             CC
Confidence            43


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.6e-74  Score=575.82  Aligned_cols=447  Identities=26%  Similarity=0.424  Sum_probs=357.0

Q ss_pred             CCCCCCCCCccCCccccHHhhhcc-cchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCC--chhhH
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGG-ALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAK--GLVSE  142 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~-~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~--~~~~~  142 (561)
                      -.|+|.+.|++|+    +..+... .......+.+.+||+++.++.+.++.++|+||+.+++|+.+..++|..  ++...
T Consensus        32 Gi~~~~p~p~~Gn----~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~  107 (499)
T KOG0158|consen   32 GIPGPKPLPFLGN----LPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYG  107 (499)
T ss_pred             CCCCCCCCCcEec----HHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcC
Confidence            4789999999999    5555543 234445555555599999999999999999999999999988888887  43322


Q ss_pred             HhH-hhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHH
Q 008564          143 VSE-FLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (561)
Q Consensus       143 ~~~-~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~  221 (561)
                      -.. .+...+++.++|+.|+++|..++|.|+..+++.|. ++++++++++++.+++....+..+++.+.+..++.|||++
T Consensus       108 d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~-~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~  186 (499)
T KOG0158|consen  108 DPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMF-PTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS  186 (499)
T ss_pred             CCCCcccccCchhccCchHHHHHHhhccccchhhHHHHH-HHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence            222 34446788899999999999999999999999999 9999999999999998655446788999999999999999


Q ss_pred             HhhcccCCCCCCCChhHHHHHHHHHHHHHhccC--cchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008564          222 SVFNYNFDSLTADSPVIDAVYTALKEAELRSTD--VLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETE  299 (561)
Q Consensus       222 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  299 (561)
                      ++||.+.+++......+..+.............  ......+|.+................+.+.+...++.|    +.+
T Consensus       187 ~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R----~~~  262 (499)
T KOG0158|consen  187 CAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQR----EKE  262 (499)
T ss_pred             hhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHH----Hhc
Confidence            999999987764444433322221111011111  11122334333332233334455556666666666665    221


Q ss_pred             ccccCcccccCCCCchHHHHHHhccc----------CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHH
Q 008564          300 GERIDDEEYVNDSDPSILRFLLASRE----------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFT  369 (561)
Q Consensus       300 ~~~~~~~~~~~~~~~~ll~~ll~~~~----------~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~  369 (561)
                                +....|+++.+++.++          .+|.+||+++++.|++||+||||++|++++|+|++|        
T Consensus       263 ----------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~--------  324 (499)
T KOG0158|consen  263 ----------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKN--------  324 (499)
T ss_pred             ----------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcC--------
Confidence                      2457789999998875          389999999999999999999999999999999999        


Q ss_pred             hhhhhhhchhHHHHHHHHHHHHhCCCC-CChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCC-CeeeCCCCEE
Q 008564          370 LRNRLLEDCNSLMKAQEEIDRVLQGRS-PSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG-NYKVNAGQDI  447 (561)
Q Consensus       370 ~~~~~~~~p~~~~klr~Ei~~~~~~~~-~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~-g~~Ip~G~~v  447 (561)
                              |++|+|||+||++++.+.. +|+|.+.+|+||++||+||||+||++|. +.|.+.+|+.++ ++.||||+.|
T Consensus       325 --------PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V  395 (499)
T KOG0158|consen  325 --------PDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPV  395 (499)
T ss_pred             --------hHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEE
Confidence                    9999999999999976544 9999999999999999999999999999 667778888888 9999999999


Q ss_pred             EEecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC
Q 008564          448 MISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ  527 (561)
Q Consensus       448 ~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~  527 (561)
                      .++++++||||++||||++|+||||.++..   ....+..|+|||.|||.|+|++||++|+|+.|++||++|+|+..+.+
T Consensus       396 ~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~---~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t  472 (499)
T KOG0158|consen  396 MIPTYALHHDPEYWPEPEKFKPERFEEENN---KSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT  472 (499)
T ss_pred             EeecccccCCcccCCCcccCCCccCCCCcc---cccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc
Confidence            999999999999999999999999986532   24577899999999999999999999999999999999999998743


Q ss_pred             cccccc---ceeeecCCCeeEEEEEec
Q 008564          528 NINMTT---GATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       528 ~~~~~~---~~~~~~~~~~~v~~~~r~  551 (561)
                      ......   +.++.|++|+++++++|.
T Consensus       473 ~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  473 IIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCcccCCccceeeecCCceEEEEEeCC
Confidence            322333   678999999999999984


No 5  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.4e-70  Score=567.67  Aligned_cols=456  Identities=30%  Similarity=0.494  Sum_probs=368.4

Q ss_pred             ccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhH-
Q 008564           64 TITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE-  142 (561)
Q Consensus        64 ~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-  142 (561)
                      ...+|||.++|++|++++.....  .....++.++..+||++|+.|+||.++|+++||+.+++|+.+....+.+...+. 
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            34589999999999965543322  466788999999999999999999999999999999999976555676776555 


Q ss_pred             HhHhhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHH
Q 008564          143 VSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLS  222 (561)
Q Consensus       143 ~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~  222 (561)
                      .+..++|.|+++++|+.|..+|+++.++|+...++.+. ..+.+++..+...+... ..++.+|+.+.++++++|+++..
T Consensus       112 ~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~-~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  112 SLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFV-PVFIESSLILLLLLELA-ASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHH-HHHHHHHHHHHHHHHHh-hcCCeEcHHHHHHHHHHHHHHHH
Confidence            77788999999999999999999999999999999999 77777777777777663 33334999999999999999999


Q ss_pred             hhcccC-C-CCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008564          223 VFNYNF-D-SLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEG  300 (561)
Q Consensus       223 ~fG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  300 (561)
                      +||... + ......++..++..+......+...+.   ...++.. ....++..++.+.++++++++|.++++...+++
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~---~~~~~~~-~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTELISKRINLPL---GTKFLYG-LKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHHHHHHHcCch---hhhHHhh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999222 1 212233566666655554444433221   1112222 226788889999999999999999998876553


Q ss_pred             cccCcccccCCCCchHHHH-HHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchh
Q 008564          301 ERIDDEEYVNDSDPSILRF-LLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCN  379 (561)
Q Consensus       301 ~~~~~~~~~~~~~~~ll~~-ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~  379 (561)
                      ...      .....++++. +++..+.+++++|.+++.+|++||+||||++++|++++|++|                |+
T Consensus       266 ~~~------~~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~h----------------P~  323 (497)
T KOG0157|consen  266 SGE------EKKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKH----------------PE  323 (497)
T ss_pred             Ccc------cchhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcC----------------HH
Confidence            211      1235667774 333335799999999999999999999999999999999999                99


Q ss_pred             HHHHHHHHHHHHhCCCCCChhhh--cCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccCC
Q 008564          380 SLMKAQEEIDRVLQGRSPSFEDI--KDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHS  457 (561)
Q Consensus       380 ~~~klr~Ei~~~~~~~~~~~~~l--~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d  457 (561)
                      +|+|+++|++++++++..++++.  ++|+||++||+|||||+|++|...|++..++.+.+||.||||+.|+++++++|||
T Consensus       324 vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~  403 (497)
T KOG0157|consen  324 VQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRD  403 (497)
T ss_pred             HHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccC
Confidence            99999999999998554333333  3599999999999999999999886665555555799999999999999999999


Q ss_pred             CcCCC-CCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCcccccccee
Q 008564          458 SQVWE-RAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGAT  536 (561)
Q Consensus       458 ~~~~~-dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~  536 (561)
                      +++|+ ||++||||||+++...  ...++++|+|||+|+|.|+|++||++|+++++++|+++|+|+++.+.........+
T Consensus       404 ~~~~~~dp~~F~PeRf~~~~~~--~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~  481 (497)
T KOG0157|consen  404 PRVWGEDPEEFDPERFLDGEEK--AKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELT  481 (497)
T ss_pred             ccccCCChhhcCccccCCCCCc--CCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEE
Confidence            99997 9999999999865322  13456899999999999999999999999999999999999998776666677889


Q ss_pred             eecCCCeeEEEEEec
Q 008564          537 IHTTNGLYMKLRQRQ  551 (561)
Q Consensus       537 ~~~~~~~~v~~~~r~  551 (561)
                      +++++|++|++++|.
T Consensus       482 l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  482 LRPKNGLKVKLRPRG  496 (497)
T ss_pred             EEecCCeEEEEEeCC
Confidence            999999999999985


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.7e-70  Score=576.46  Aligned_cols=456  Identities=17%  Similarity=0.254  Sum_probs=352.3

Q ss_pred             cCCCCCCCCCccCCccccHHhhhccc-chHHHHHHHHHhC-CeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhH
Q 008564           65 ITQSDESNIPVASAKLDDVTDLLGGA-LFLPLFKWMNVYG-PIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~~~~-~~~~l~~~~~kyG-pV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (561)
                      ++||||.++|++|+    ++.+..+. .+..+.+|.++|| +||++++|++++|+|+||++++++|.+++..|.+++...
T Consensus        57 ~lPPGP~~lPiiGn----l~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         57 PLPPGPTGFPIVGM----IPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCcCCCCCCcccc----hHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            47999999999999    55554433 4678999999999 799999999999999999999999998877788776432


Q ss_pred             HhHhhcCCc----eeccCCchhhhhhcccCccc-chHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHH
Q 008564          143 VSEFLFGSG----FAIAEGPLWMGRRRAVAPSL-HKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLD  217 (561)
Q Consensus       143 ~~~~~~g~~----l~~~~g~~w~~~Rr~l~~~f-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~d  217 (561)
                      .. ..++.+    ++..+|+.|+++|+++...+ +......+. +.++++++.+++.+.+...+|+++|+.+.+..+++|
T Consensus       133 ~~-~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  210 (543)
T PLN02971        133 AQ-KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLH-DNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGN  210 (543)
T ss_pred             ch-hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHH
Confidence            22 233333    66778999999999997554 444555666 788888889988887655566789999999999999


Q ss_pred             HHHHHhhcccCCCCC---CCC---hhHHHHHHHHHHHHHhccCcchhhhHhhhhcc-c-hhhHHHHHHHHHHHHHHHHHH
Q 008564          218 VIGLSVFNYNFDSLT---ADS---PVIDAVYTALKEAELRSTDVLPYWKVKALCKI-V-PRQIKAEKAVTVIRKTVEELI  289 (561)
Q Consensus       218 vi~~~~fG~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~l~~~~~~~i  289 (561)
                      ++++++||.++....   +++   +....+...+...... ........+|.+..+ . +..+...+..+.+.+++..++
T Consensus       211 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        211 AIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFT-FAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhc-cCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            999999998874321   011   2233333333222111 111111223333222 1 223344556677888888888


Q ss_pred             HHHHHHHHhhccccCcccccCCCCchHHHHHHhccc-----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhH
Q 008564          290 IKCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMES  364 (561)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~  364 (561)
                      +++++..+.+.         .....|+++.|++..+     +++++++.+++.++++||+|||+++++|++++|++|   
T Consensus       290 ~~~~~~~~~~~---------~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~---  357 (543)
T PLN02971        290 DERIKMWREGK---------RTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINK---  357 (543)
T ss_pred             HHHHHHHhccC---------CCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhC---
Confidence            88765433221         1123579999987532     389999999999999999999999999999999999   


Q ss_pred             HHHHHhhhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCC
Q 008564          365 LIRFTLRNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNA  443 (561)
Q Consensus       365 ~~~~~~~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~  443 (561)
                                   |++|+|+++||++++|+ +.++++++.+||||+|||+|+||++|++|..++|.+.+|+.++||.|||
T Consensus       358 -------------Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~Ipk  424 (543)
T PLN02971        358 -------------PEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPK  424 (543)
T ss_pred             -------------HHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECC
Confidence                         99999999999999984 6799999999999999999999999999998899999999999999999


Q ss_pred             CCEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEe
Q 008564          444 GQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFEL  523 (561)
Q Consensus       444 G~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~  523 (561)
                      |+.|+++.|++||||++|+||++|+||||+++............|+|||+|+|.|+|++||++|+++++|+|+++|+|++
T Consensus       425 Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~  504 (543)
T PLN02971        425 GSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL  504 (543)
T ss_pred             CCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEe
Confidence            99999999999999999999999999999864321111123567999999999999999999999999999999999999


Q ss_pred             cCCC-ccccccc-eeeecCCCeeEEEEEecC
Q 008564          524 VPDQ-NINMTTG-ATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       524 ~~~~-~~~~~~~-~~~~~~~~~~v~~~~r~~  552 (561)
                      .++. .+++.+. .++..++.+.|.+++|..
T Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (543)
T PLN02971        505 AGSETRVELMESSHDMFLSKPLVMVGELRLS  535 (543)
T ss_pred             CCCCCCcchhhhcCcccccccceeeeeecCC
Confidence            8643 4444321 255456689999999943


No 7  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.2e-69  Score=572.80  Aligned_cols=455  Identities=24%  Similarity=0.435  Sum_probs=356.2

Q ss_pred             ChHHHHHHHhhcccCCCCCCCCCccCCccccHHhhhc------------------ccchHHHHHHHHHhCCeEEEccCCc
Q 008564           52 SPDWLTSLTKSLTITQSDESNIPVASAKLDDVTDLLG------------------GALFLPLFKWMNVYGPIYRLAAGPR  113 (561)
Q Consensus        52 ~~~~l~~~~~~~~~~~pgp~~lP~ig~~~~~~~~~~~------------------~~~~~~l~~~~~kyGpV~ri~lg~~  113 (561)
                      .+.|...+.+..+  ||||+++|++||.    ..+..                  +.....+.+|+++|||||++++|+.
T Consensus        31 ~~~~~~~~~~~~~--~PGP~~~P~iGnl----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~  104 (516)
T PLN02290         31 TPRRIKKIMERQG--VRGPKPRPLTGNI----LDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTE  104 (516)
T ss_pred             cHHHHHHHHHHcC--CCCCCCCcCCCCH----HHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCc
Confidence            3344444444444  8999999999994    33321                  3334467899999999999999999


Q ss_pred             eEEEEeCHHHHHHHHhhCCCccCCchhh--HHhHhhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHH
Q 008564          114 NFVVVSDPAIAKHVLRNYGTKYAKGLVS--EVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERL  191 (561)
Q Consensus       114 ~~vvv~dp~~i~~il~~~~~~~~~~~~~--~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l  191 (561)
                      ++|+++||+++++++.++. .+..++..  ......+|.++++++|+.|+++|+++.+.|+..+++.+. +.+.++++.+
T Consensus       105 ~~vvv~dp~~v~~il~~~~-~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l  182 (516)
T PLN02290        105 PRLCLTETELIKELLTKYN-TVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYA-GHMVECTKQM  182 (516)
T ss_pred             cEEEECCHHHHHHHHhcCC-CCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHH-HHHHHHHHHH
Confidence            9999999999999998764 33333321  122334578888899999999999999999999999998 8999999999


Q ss_pred             HHHHHhhhcCC-CceeHHHHHHHHHHHHHHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccc-h
Q 008564          192 VERLQTDALNG-TAVNMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIV-P  269 (561)
Q Consensus       192 ~~~l~~~~~~g-~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~  269 (561)
                      ++.|.+....+ .++|+.+++..+++|+++.++||.+++.   .++....+............. .   .++.+..+. .
T Consensus       183 ~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~-~---~~p~~~~~p~~  255 (516)
T PLN02290        183 LQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEK---GKQIFHLLTVLQRLCAQATRH-L---CFPGSRFFPSK  255 (516)
T ss_pred             HHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCcccc---chHHHHHHHHHHHHHHHhhhh-h---cCchhhhCCCh
Confidence            99998754444 5899999999999999999999988753   233333332222211111100 0   012221111 1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccCCCCchHHHHHHhccc-------CCChHHHHHHHHHHHHh
Q 008564          270 RQIKAEKAVTVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-------EVSSVQLRDDLLSMLVA  342 (561)
Q Consensus       270 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-------~~~~~~i~~~~~~~l~A  342 (561)
                      ..+......+.+.+++.+.++++++..+.+.+        +....|+++.+++..+       .++++++.++++++++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~A  327 (516)
T PLN02290        256 YNREIKSLKGEVERLLMEIIQSRRDCVEIGRS--------SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFA  327 (516)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--------CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhh
Confidence            23344556678888888888887664432210        1123578888886421       26788999999999999


Q ss_pred             chhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHHHHHHHHHHHhCCCCCChhhhcCCchhHHHhhhccccCCCC
Q 008564          343 GHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHP  422 (561)
Q Consensus       343 G~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~klr~Ei~~~~~~~~~~~~~l~~lpyL~a~i~E~lRl~p~~  422 (561)
                      |+|||+++++|++++|++|                |++|+|+++||++++|++.++++++++||||+|||+||||++|++
T Consensus       328 G~dTta~tl~~~l~~L~~~----------------P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~  391 (516)
T PLN02290        328 GHETTALLLTWTLMLLASN----------------PTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPA  391 (516)
T ss_pred             hHHHHHHHHHHHHHHHhcC----------------HHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCc
Confidence            9999999999999999999                999999999999999987899999999999999999999999999


Q ss_pred             cccccccccCccCCCCeeeCCCCEEEEecccccCCCcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhH
Q 008564          423 PVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGD  501 (561)
Q Consensus       423 ~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  501 (561)
                      +. ++|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||++..     ......|+|||.|+|.|+|+
T Consensus       392 ~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~  465 (516)
T PLN02290        392 TL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQ  465 (516)
T ss_pred             cc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccH
Confidence            86 578888999999999999999999999999999999 799999999998431     12235799999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcceEEecCCCccccccceeeecCCCeeEEEEEec
Q 008564          502 QFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       502 ~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  551 (561)
                      +||++|++++++.|+++|+|++.++.+.......+..|++|++|++++|.
T Consensus       466 ~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        466 AFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             HHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEEEeCC
Confidence            99999999999999999999998764333334578899999999999985


No 8  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.9e-69  Score=565.49  Aligned_cols=450  Identities=22%  Similarity=0.359  Sum_probs=350.2

Q ss_pred             CCCCCCCCCccCCccccHHhhhcc--cchHHHHHHHHHhCCeEE---EccCCceEEEEeCHHHHHHHHhhCCCccCCchh
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGG--ALFLPLFKWMNVYGPIYR---LAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~--~~~~~l~~~~~kyGpV~r---i~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (561)
                      ..|||.++|++|+.    ..+.+.  ..++.+.+...+||..++   +++|+.++++|+||+++++||.+....|.++..
T Consensus        32 ~~p~p~~~pl~G~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~  107 (500)
T PLN02169         32 GQPILKNWPFLGML----PGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE  107 (500)
T ss_pred             CCCCCCCCCcccch----HHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence            46899999999994    333322  123334444445887665   678889999999999999999887667888764


Q ss_pred             hHHhHhhcCCceeccCCchhhhhhcccCcccchHhHHHHH-HHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHH
Q 008564          141 SEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV-DCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (561)
Q Consensus       141 ~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~-~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi  219 (561)
                      .......+|.|+++++|+.|+++|++++++|+...+..+. ...+.++++.+++.+++...+|+++|+.+.+..+++|++
T Consensus       108 ~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        108 FKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            4444456789999999999999999999999988776432 256677888899988876566778999999999999999


Q ss_pred             HHHhhcccCCCCCCC---ChhHHHHHHHHHHHHHhccCcchhhhHhhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          220 GLSVFNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPYWKVKALCKI-VPRQIKAEKAVTVIRKTVEELIIKCKEI  295 (561)
Q Consensus       220 ~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~  295 (561)
                      +.++||.+.+..+..   .++...+.........+.  ..|.+.+.+...+ .+..++..++.+.+.+++.++|+++++.
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~  265 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRH--FKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKE  265 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHH--hccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654321   233333333222222121  1222111111111 2234566788889999999999888754


Q ss_pred             HHhhccccCcccccCCCCchHHHHHHhccc-------CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHH
Q 008564          296 VETEGERIDDEEYVNDSDPSILRFLLASRE-------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRF  368 (561)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-------~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~  368 (561)
                      .....+.       ++...|+++.+++..+       +++++++.+++.++++||+|||+++++|++++|+.|       
T Consensus       266 ~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~-------  331 (500)
T PLN02169        266 EISRAET-------EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKH-------  331 (500)
T ss_pred             hhccccc-------cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCC-------
Confidence            2211100       1123578888876532       267889999999999999999999999999999999       


Q ss_pred             HhhhhhhhchhHHHHHHHHHHHHhCCCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEE
Q 008564          369 TLRNRLLEDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIM  448 (561)
Q Consensus       369 ~~~~~~~~~p~~~~klr~Ei~~~~~~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~  448 (561)
                               |++|+|+++||++++     +++|+.+||||+|||+||||++|++|...|+++.+|++++||.||||+.|+
T Consensus       332 ---------Pevq~kl~~Ei~~v~-----~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~  397 (500)
T PLN02169        332 ---------PQVMAKIRHEINTKF-----DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIV  397 (500)
T ss_pred             ---------HHHHHHHHHHHHhhC-----CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEE
Confidence                     999999999999874     689999999999999999999999999998888888888999999999999


Q ss_pred             EecccccCCCcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC
Q 008564          449 ISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ  527 (561)
Q Consensus       449 ~~~~~~~~d~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~  527 (561)
                      +++|++||||++| +||++|+||||+++... ........|+|||+|+|.|+|++||++|+++++|+|+++|+|+++++.
T Consensus       398 i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~-~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~  476 (500)
T PLN02169        398 ICIYALGRMRSVWGEDALDFKPERWISDNGG-LRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH  476 (500)
T ss_pred             EcHHHhhCCccccCCChhhcCccccCCCCCC-ccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence            9999999999999 79999999999864321 111236789999999999999999999999999999999999998776


Q ss_pred             ccccccceeeecCCCeeEEEEEe
Q 008564          528 NINMTTGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       528 ~~~~~~~~~~~~~~~~~v~~~~r  550 (561)
                      ++....+.++.|++|+.|++++|
T Consensus       477 ~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        477 KIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             CcccccceEEecCCCEEEEEEeC
Confidence            66555667889999999999987


No 9  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.5e-69  Score=568.32  Aligned_cols=452  Identities=20%  Similarity=0.331  Sum_probs=354.5

Q ss_pred             ccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHH
Q 008564           64 TITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEV  143 (561)
Q Consensus        64 ~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  143 (561)
                      ...||||.++|++|+    +..+...+++.++.+|+++||++|++++|+.++|+++||+++++++.+++..|.+++....
T Consensus        27 ~~~pPgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         27 LRLPPGPKGLPIIGN----LHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCcCCCCCCeecc----HHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            346899999999999    5555444678899999999999999999999999999999999999887767777664322


Q ss_pred             hHh--hcCCce-eccCCchhhhhhccc-CcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHH
Q 008564          144 SEF--LFGSGF-AIAEGPLWMGRRRAV-APSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (561)
Q Consensus       144 ~~~--~~g~~l-~~~~g~~w~~~Rr~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi  219 (561)
                      ...  ..+..+ ....++.|+++|+.+ .+.|+.+++..+. +.++++++.++++|.+....++++|+.+++..+++|++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~-~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi  181 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFR-PVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV  181 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhH-HHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHH
Confidence            211  123333 234578999999974 6999999999988 89999999999999876666778999999999999999


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhh---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          220 GLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALC---KIVPRQIKAEKAVTVIRKTVEELIIKCKEIV  296 (561)
Q Consensus       220 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  296 (561)
                      +.++||.+++..+   +....+...................+|++.   .+.+..++..++.+.+.+++.++++++++..
T Consensus       182 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (499)
T PLN03234        182 CRQAFGKRYNEYG---TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPN  258 (499)
T ss_pred             HHHHhCCcccccc---hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999886432   222333333222221111111111122221   1223345677888889999999998765331


Q ss_pred             HhhccccCcccccCCCCchHHHHHHhccc------CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHh
Q 008564          297 ETEGERIDDEEYVNDSDPSILRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTL  370 (561)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~ll~~ll~~~~------~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~  370 (561)
                      ..           +....++++.+++..+      .++++++.+++.++++||+|||+++++|++++|++|         
T Consensus       259 ~~-----------~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~---------  318 (499)
T PLN03234        259 RP-----------KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKY---------  318 (499)
T ss_pred             cc-----------CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhC---------
Confidence            11           1123467777775421      378999999999999999999999999999999999         


Q ss_pred             hhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEE
Q 008564          371 RNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  449 (561)
Q Consensus       371 ~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  449 (561)
                             |++|+|+++|+++++++ +.++++|+++||||+|||+|+||++|++|..++|.+.+|+.++||.|||||.|++
T Consensus       319 -------P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~  391 (499)
T PLN03234        319 -------PEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQV  391 (499)
T ss_pred             -------HHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEE
Confidence                   99999999999999985 4589999999999999999999999999998778888899999999999999999


Q ss_pred             ecccccCCCcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC-
Q 008564          450 SVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-  527 (561)
Q Consensus       450 ~~~~~~~d~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~-  527 (561)
                      +++++||||++| +||++|+||||++++...........++|||+|+|+|+|+++|++|+++++|+|+++|+|++.++. 
T Consensus       392 ~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  471 (499)
T PLN03234        392 NAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIK  471 (499)
T ss_pred             ehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCC
Confidence            999999999999 799999999998653211112345689999999999999999999999999999999999998653 


Q ss_pred             --ccccc--cceeeecCCCeeEEEEEe
Q 008564          528 --NINMT--TGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       528 --~~~~~--~~~~~~~~~~~~v~~~~r  550 (561)
                        ++.+.  .+.+.++++.+++.+++|
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        472 PEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCCCcccccccccccCCCeEEEeecC
Confidence              33433  466777888787777766


No 10 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.5e-69  Score=564.63  Aligned_cols=464  Identities=21%  Similarity=0.319  Sum_probs=360.2

Q ss_pred             HHHHHHHhhcc-cCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCC
Q 008564           54 DWLTSLTKSLT-ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYG  132 (561)
Q Consensus        54 ~~l~~~~~~~~-~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~  132 (561)
                      +++.++..++. +.||||.++|++|+    +..+ +..++..+.+|+++||+||++++|++++|+++||+++++++.+.+
T Consensus        19 ~~~~~~~~~~~~~~pPgp~~~Pl~G~----l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~   93 (504)
T PLN00110         19 FFIRSLLPKPSRKLPPGPRGWPLLGA----LPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLD   93 (504)
T ss_pred             HHHHHHhhcccCCCcccCCCCCeeec----hhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcc
Confidence            34445544443 36889999999999    4433 345788999999999999999999899999999999999998876


Q ss_pred             CccCCchhhHH-hHhhc--CCceeccCCchhhhhhcccCc-ccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHH
Q 008564          133 TKYAKGLVSEV-SEFLF--GSGFAIAEGPLWMGRRRAVAP-SLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNME  208 (561)
Q Consensus       133 ~~~~~~~~~~~-~~~~~--g~~l~~~~g~~w~~~Rr~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~  208 (561)
                      ..|.+++.... .....  +.+++..+|+.|+++|+.+.+ .|+.+.++.+. +.+.++++.+++.+.+...+|+++|+.
T Consensus        94 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~i~~~~~~~~~~l~~~~~~g~~~~~~  172 (504)
T PLN00110         94 INFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWS-QVRTVELGHMLRAMLELSQRGEPVVVP  172 (504)
T ss_pred             hhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhh-HHHHHHHHHHHHHHHHhccCCCcEeHH
Confidence            67777653321 12222  245667789999999999985 79999999988 788888889999987766667889999


Q ss_pred             HHHHHHHHHHHHHHhhcccCC-CCCC-CChhHHHHHHHHHHHHHhccCcchhhhHhhhhccc--hhhHHHHHHHHHHHHH
Q 008564          209 EKFSQLTLDVIGLSVFNYNFD-SLTA-DSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIV--PRQIKAEKAVTVIRKT  284 (561)
Q Consensus       209 ~~~~~~~~dvi~~~~fG~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~  284 (561)
                      +++..+++|+++.++||.++. ..+. .+++...+...+...    ........+|.+.++.  ...++..+..+.+.++
T Consensus       173 ~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~  248 (504)
T PLN00110        173 EMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTA----GYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKL  248 (504)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHh----ccccHHHHcchHhhhCcchHHHHHHHHHHHHHHH
Confidence            999999999999999998862 1111 122333333222211    1111111123222211  1223445556677777


Q ss_pred             HHHHHHHHHHHHHhhccccCcccccCCCCchHHHHHHhcc-----cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHh
Q 008564          285 VEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASR-----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLS  359 (561)
Q Consensus       285 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~-----~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~  359 (561)
                      +.++++++++....           .....|+++.+++..     .+++++++.++++++++||+|||+++++|++++|+
T Consensus       249 ~~~~i~~~~~~~~~-----------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~  317 (504)
T PLN00110        249 LTRMIEEHTASAHE-----------RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEML  317 (504)
T ss_pred             HHHHHHHHHhhccc-----------cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            77777776543211           112357888888643     24889999999999999999999999999999999


Q ss_pred             hchhHHHHHHhhhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCC
Q 008564          360 KEMESLIRFTLRNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGN  438 (561)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g  438 (561)
                      +|                |++|+|+++|+++++++ +.++++++++||||+|||+||||++|+++..++|.+.+|+.++|
T Consensus       318 ~~----------------P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g  381 (504)
T PLN00110        318 KN----------------PSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNG  381 (504)
T ss_pred             hC----------------HHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCC
Confidence            99                99999999999999985 46899999999999999999999999999888888899999999


Q ss_pred             eeeCCCCEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCCCC-CCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 008564          439 YKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNE-SNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQ  517 (561)
Q Consensus       439 ~~Ip~G~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~  517 (561)
                      |.|||||.|+++.+++||||++|+||++|+||||++++..... ......++|||+|+|.|+|++||++|+++++|+|++
T Consensus       382 ~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~  461 (504)
T PLN00110        382 YYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVH  461 (504)
T ss_pred             EEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999864321111 112357999999999999999999999999999999


Q ss_pred             cceEEecCCCccccc--cceeeecCCCeeEEEEEecCCC
Q 008564          518 NMNFELVPDQNINMT--TGATIHTTNGLYMKLRQRQHLN  554 (561)
Q Consensus       518 ~f~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~~~  554 (561)
                      +|+|++.++.++...  .+.++.|+.++.|++++|.+++
T Consensus       462 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  500 (504)
T PLN00110        462 SFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLHQS  500 (504)
T ss_pred             hceeecCCCCccCcccccccccccCCCceEeeccCCCch
Confidence            999999877655533  4567778889999999997554


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9.4e-70  Score=569.04  Aligned_cols=450  Identities=20%  Similarity=0.306  Sum_probs=347.7

Q ss_pred             HHhhcccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCc
Q 008564           59 LTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKG  138 (561)
Q Consensus        59 ~~~~~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~  138 (561)
                      +.+.+...+|||.++|++|+    +..+ ...++..+.+|+++||+||++++|+.++|+++||+++++++.++...|.++
T Consensus        23 ~~~~~~~~~pgp~~~p~~G~----~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r   97 (482)
T PTZ00404         23 YKKIHKNELKGPIPIPILGN----LHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDR   97 (482)
T ss_pred             hhhccCCCCCCCCCCCeecc----Hhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCC
Confidence            33445556899999999999    4443 346789999999999999999999999999999999999998765556655


Q ss_pred             hhhHH-hHhhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHH
Q 008564          139 LVSEV-SEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLD  217 (561)
Q Consensus       139 ~~~~~-~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~d  217 (561)
                      +.... ....++.+++..+|+.|+++|+++.++|+...++.+. +.+.+.++.+++.|.+....|+.+|+.+++..+++|
T Consensus        98 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  176 (482)
T PTZ00404         98 PKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIY-DLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMS  176 (482)
T ss_pred             CCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHH-HHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHH
Confidence            43222 1223478889999999999999999999999999998 899999999999998655567789999999999999


Q ss_pred             HHHHHhhcccCCCCCCC-ChhHHHHHHHHHHHHHhccCcchhhhHhhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          218 VIGLSVFNYNFDSLTAD-SPVIDAVYTALKEAELRSTDVLPYWKVKALCKIV-PRQIKAEKAVTVIRKTVEELIIKCKEI  295 (561)
Q Consensus       218 vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~  295 (561)
                      +++.++||.+++..++. ++....+...+...............++++.... .......+..+.+.+++.+.++++++.
T Consensus       177 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  256 (482)
T PTZ00404        177 AMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKT  256 (482)
T ss_pred             HHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999987653211 1111222222222221111100000011111111 111122344556666666666554332


Q ss_pred             HHhhccccCcccccCCCCchHHHHHHhcccCCChH---HHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhh
Q 008564          296 VETEGERIDDEEYVNDSDPSILRFLLASREEVSSV---QLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRN  372 (561)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~---~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~  372 (561)
                      .+            .+...|+++.|+++..+.+++   ++.+++.++++||+|||+++++|++++|++|           
T Consensus       257 ~~------------~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~-----------  313 (482)
T PTZ00404        257 ID------------PEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNY-----------  313 (482)
T ss_pred             cC------------CCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcC-----------
Confidence            10            112457999998775433444   4888999999999999999999999999999           


Q ss_pred             hhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCC-CCeeeCCCCEEEEe
Q 008564          373 RLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLP-GNYKVNAGQDIMIS  450 (561)
Q Consensus       373 ~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~-~g~~Ip~G~~v~~~  450 (561)
                           |++|+|+++||++++++ +.++++++++||||+|||+|+||++|++|..++|.+.+|+++ +||.||||+.|.++
T Consensus       314 -----P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~  388 (482)
T PTZ00404        314 -----PEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILIN  388 (482)
T ss_pred             -----cHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEee
Confidence                 99999999999999985 568999999999999999999999999998778888889888 99999999999999


Q ss_pred             cccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccc
Q 008564          451 VYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNIN  530 (561)
Q Consensus       451 ~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~  530 (561)
                      .+++||||++|+||++|+||||++..       ....|+|||+|+|.|+|++||++|+++++++|+++|+|++.+++++.
T Consensus       389 ~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  461 (482)
T PTZ00404        389 YYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKID  461 (482)
T ss_pred             HHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCC
Confidence            99999999999999999999998531       34589999999999999999999999999999999999997766543


Q ss_pred             c--ccceeeecCCCeeEEEEEe
Q 008564          531 M--TTGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       531 ~--~~~~~~~~~~~~~v~~~~r  550 (561)
                      .  ..+.+.. +.++.|.+++|
T Consensus       462 ~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        462 ETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cccccceeec-CCCceeeeecC
Confidence            2  3455555 56899999987


No 12 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.2e-68  Score=562.62  Aligned_cols=453  Identities=26%  Similarity=0.444  Sum_probs=352.8

Q ss_pred             CCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHh---CCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhh-
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVY---GPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVS-  141 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~ky---GpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~-  141 (561)
                      .+|||.++|++|+.+    .++.  .+..+.+|.++|   |++|++++|+.+.++++||+++++|+.++...+.++..+ 
T Consensus        31 ~~pgp~~~p~~G~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         31 NRKGPKSWPIIGAAL----EQLK--NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             ccCCCCCCCeecchH----HHHh--ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            478999999999943    3322  245678888888   899999999999999999999999998764567666443 


Q ss_pred             HHhHhhcCCceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHH
Q 008564          142 EVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (561)
Q Consensus       142 ~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~  221 (561)
                      .....++|.+++..+|+.|+++|+++++.|+..+++.+.+.++.+.++.+++.+.+....|+++|+.++++.+++|+++.
T Consensus       105 ~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        105 SYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHH
Confidence            23344567888888999999999999999999999998844457778888888876544567899999999999999999


Q ss_pred             HhhcccCCCCCCC---ChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008564          222 SVFNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVET  298 (561)
Q Consensus       222 ~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  298 (561)
                      ++||.+++..+.+   ..+...+............  .+.+.+..+.. .+..+...+....+.+++.++++++++...+
T Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        185 VGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFI--DPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHhCCCccccccCCCccHHHHHHHHHHHHHHHHHh--cchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998765432   2333333322211111111  12111111100 1122334456777888888888887755432


Q ss_pred             hccccCcccccCCCCchHHHHHHhccc----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhh
Q 008564          299 EGERIDDEEYVNDSDPSILRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRL  374 (561)
Q Consensus       299 ~~~~~~~~~~~~~~~~~ll~~ll~~~~----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~  374 (561)
                      ....  .    +....|+++.+++..+    +++++++.++++++++||+|||+++++|++|+|++|             
T Consensus       262 ~~~~--~----~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~-------------  322 (516)
T PLN03195        262 ARKS--G----KKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMN-------------  322 (516)
T ss_pred             cccc--c----ccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcC-------------
Confidence            1100  0    1224578999886532    489999999999999999999999999999999999             


Q ss_pred             hhchhHHHHHHHHHHHHhCC---------------------CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCc
Q 008564          375 LEDCNSLMKAQEEIDRVLQG---------------------RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDD  433 (561)
Q Consensus       375 ~~~p~~~~klr~Ei~~~~~~---------------------~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~  433 (561)
                         |++|+|+++||++++++                     +.++++++++||||+|||+|+||++|++|...|++..++
T Consensus       323 ---P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~  399 (516)
T PLN03195        323 ---PHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDD  399 (516)
T ss_pred             ---HHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCc
Confidence               99999999999998642                     357999999999999999999999999999988877777


Q ss_pred             cCCCCeeeCCCCEEEEecccccCCCcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHH
Q 008564          434 VLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVAL  512 (561)
Q Consensus       434 ~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l  512 (561)
                      ++++||.||||+.|.++.+++||||++| +||++|+||||++++..  .......|+|||+|+|.|+|++||++|+++++
T Consensus       400 ~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~l  477 (516)
T PLN03195        400 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMAL  477 (516)
T ss_pred             CcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHH
Confidence            7779999999999999999999999999 99999999999854211  12244579999999999999999999999999


Q ss_pred             HHHHhcceEEecCCCccccccceeeecCCCeeEEEEEec
Q 008564          513 AILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       513 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  551 (561)
                      |.|+++|+|++.++.++......+..|+.|+.|++++|.
T Consensus       478 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        478 ALLCRFFKFQLVPGHPVKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHHhceeEecCCCcceeeeeeEEecCCCEEEEEEeCC
Confidence            999999999998776665555567789999999999874


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.8e-68  Score=554.33  Aligned_cols=451  Identities=22%  Similarity=0.285  Sum_probs=350.2

Q ss_pred             CCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHhHh
Q 008564           67 QSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEF  146 (561)
Q Consensus        67 ~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  146 (561)
                      ||||+++|++|+    ++++...+++..+.+|+++||+||++++|++++|+|+||+++++++.++...|.+++.......
T Consensus         1 ppgp~~lP~iG~----l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~   76 (466)
T PLN02655          1 VPAVPGLPVIGN----LLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV   76 (466)
T ss_pred             CcCCCCCCcccc----HHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH
Confidence            689999999999    6666556689999999999999999999999999999999999999887777777654444443


Q ss_pred             hcC--Cceecc-CCchhhhhhcccC-cccchHhHHHHHHHHHHHHHHHHHHHHHhhhc--CCCceeHHHHHHHHHHHHHH
Q 008564          147 LFG--SGFAIA-EGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDAL--NGTAVNMEEKFSQLTLDVIG  220 (561)
Q Consensus       147 ~~g--~~l~~~-~g~~w~~~Rr~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~g~~vdl~~~~~~~~~dvi~  220 (561)
                      +.+  .++.+. +|+.|+++|+.+. +.|+...++.+. +.+++.++.+++.+.+.+.  .++++|+.+++..+++|+++
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFR-DTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhH-HHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            443  235554 4899999998665 456666667776 7778888888888866443  46689999999999999999


Q ss_pred             HHhhcccCCCCCCCC---hh--HHHHHHHHHHHHHhccCcchhhhHhhhhccch--hhHHHHHHHHHHHHHHHHHHHHHH
Q 008564          221 LSVFNYNFDSLTADS---PV--IDAVYTALKEAELRSTDVLPYWKVKALCKIVP--RQIKAEKAVTVIRKTVEELIIKCK  293 (561)
Q Consensus       221 ~~~fG~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~~i~~~~  293 (561)
                      .++||.+++.....+   ..  ...+...................+|.+.++..  ..+...+....+.++++.++++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999876543111   10  11122222222111111100111232222211  112222333445677777777766


Q ss_pred             HHHHhhccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhh
Q 008564          294 EIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNR  373 (561)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~  373 (561)
                      +.....           ....|+++.+++..+.++++++.++++++++||+|||+++|+|++++|++|            
T Consensus       236 ~~~~~~-----------~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~------------  292 (466)
T PLN02655        236 KRIARG-----------EERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKN------------  292 (466)
T ss_pred             HhhcCC-----------CCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------------
Confidence            543221           123479999998877799999999999999999999999999999999999            


Q ss_pred             hhhchhHHHHHHHHHHHHhCCCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEeccc
Q 008564          374 LLEDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYN  453 (561)
Q Consensus       374 ~~~~p~~~~klr~Ei~~~~~~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~  453 (561)
                          |++|+|+++||++++++..++++++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.++
T Consensus       293 ----p~~~~~l~~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~  368 (466)
T PLN02655        293 ----PDKQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYG  368 (466)
T ss_pred             ----HHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHH
Confidence                9999999999999998777999999999999999999999999999988888899999999999999999999999


Q ss_pred             ccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCc-cccc
Q 008564          454 IHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN-INMT  532 (561)
Q Consensus       454 ~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~-~~~~  532 (561)
                      +||||++|+||++|+||||++++.   .......++|||+|+|.|+|++||.+|+++++++||++|+|++.++.. ....
T Consensus       369 ~~~d~~~~~~p~~F~PeR~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  445 (466)
T PLN02655        369 CNMDKKRWENPEEWDPERFLGEKY---ESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDT  445 (466)
T ss_pred             hcCCcccCCChhccCccccCCCCc---ccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccch
Confidence            999999999999999999986431   112346899999999999999999999999999999999999976542 2223


Q ss_pred             cceeeecCCCeeEEEEEecC
Q 008564          533 TGATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       533 ~~~~~~~~~~~~v~~~~r~~  552 (561)
                      .+.++.+++++.|++++|..
T Consensus       446 ~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        446 VQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             hheeEeecCCcEEEEeecCC
Confidence            46677888999999998853


No 14 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.4e-68  Score=561.40  Aligned_cols=457  Identities=21%  Similarity=0.308  Sum_probs=345.5

Q ss_pred             cCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHh
Q 008564           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVS  144 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  144 (561)
                      ..||||.++|++|+    +..+..+..+..+.+|+++||+||++++|+.++|+++||+.+++++.+++..|.+++.....
T Consensus        30 ~~pPgp~~~p~~g~----l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~  105 (503)
T PLN02394         30 KLPPGPAAVPIFGN----WLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF  105 (503)
T ss_pred             CCCcCCCCCCeeee----HHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence            36899999999999    55554444678999999999999999999889999999999999998766566655432222


Q ss_pred             HhhcC---CceeccCCchhhhhhcccC-cccchHhHHHHHHHHHHHHHHHHHHHHHhhhc-CCCceeHHHHHHHHHHHHH
Q 008564          145 EFLFG---SGFAIAEGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDAL-NGTAVNMEEKFSQLTLDVI  219 (561)
Q Consensus       145 ~~~~g---~~l~~~~g~~w~~~Rr~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~g~~vdl~~~~~~~~~dvi  219 (561)
                      ..+.|   .+++..+|+.|+++|+.+. +.|+.+.++.+. +.++++++.++++|.+... .++.+|+.++++.+++|++
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~-~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR-YGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhh-HHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            33333   3467778999999999986 999998898888 8889999999999976432 2446899999999999999


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCc--chhhhHhhhhccchh-hHHHHHHHHHHHH-HHHHHHHHHHHH
Q 008564          220 GLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDV--LPYWKVKALCKIVPR-QIKAEKAVTVIRK-TVEELIIKCKEI  295 (561)
Q Consensus       220 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~-~~~~~~~~~~l~~-~~~~~i~~~~~~  295 (561)
                      +.++||.+++..+  ++....+.............+  .....++++...... .+..........+ +...+++++++.
T Consensus       185 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        185 YRMMFDRRFESED--DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHHHhCCCccccc--chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999986532  233333333322221111100  000011221111111 1111111122222 233345555443


Q ss_pred             HHhhccccCcccccCCCCchHHHHHHhccc--CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhh
Q 008564          296 VETEGERIDDEEYVNDSDPSILRFLLASRE--EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNR  373 (561)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~--~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~  373 (561)
                      .+.....       .+...|+++.|++..+  .++++++.+++..+++||+|||+++++|++|+|++|            
T Consensus       263 ~~~~~~~-------~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~------------  323 (503)
T PLN02394        263 MSAKGMD-------KEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNH------------  323 (503)
T ss_pred             hhhccCC-------cchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcC------------
Confidence            2211100       1124578999987543  488999999999999999999999999999999999            


Q ss_pred             hhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecc
Q 008564          374 LLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVY  452 (561)
Q Consensus       374 ~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~  452 (561)
                          |++|+|+++||+++++. +.++++++++||||+|||+|+||++|++|...+|.+.+|+.++||.||+||.|.+++|
T Consensus       324 ----P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~  399 (503)
T PLN02394        324 ----PEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAW  399 (503)
T ss_pred             ----HHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchH
Confidence                99999999999999984 4689999999999999999999999999999889988899999999999999999999


Q ss_pred             cccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC-cccc
Q 008564          453 NIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINM  531 (561)
Q Consensus       453 ~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~-~~~~  531 (561)
                      ++||||++|+||++|+||||+++++..........++|||+|+|+|+|++||++|+++++|+|+++|+|++.++. +++.
T Consensus       400 ~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  479 (503)
T PLN02394        400 WLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDV  479 (503)
T ss_pred             HHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCcc
Confidence            999999999999999999998653221122245679999999999999999999999999999999999998776 3554


Q ss_pred             c--c-ceeeecCCCeeEEEEEec
Q 008564          532 T--T-GATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       532 ~--~-~~~~~~~~~~~v~~~~r~  551 (561)
                      .  . ++.+..+..+.|++.+|.
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        480 SEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             ccccCceeeccCCCceEEeecCC
Confidence            4  2 356656668999999985


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.3e-68  Score=559.95  Aligned_cols=463  Identities=23%  Similarity=0.311  Sum_probs=356.1

Q ss_pred             cccCCCCCCCCCccCCccccHHhhh--cccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchh
Q 008564           63 LTITQSDESNIPVASAKLDDVTDLL--GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (561)
Q Consensus        63 ~~~~~pgp~~lP~ig~~~~~~~~~~--~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (561)
                      +.++||||+++|++|+    +..+.  ...++..+.+|+++||+||++++|+.++|+++||+++++++.+++..|.+++.
T Consensus        33 ~~~lpPgp~~~pl~G~----l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         33 GRRLPPGPPAVPLLGS----LVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCcCCCCCccccc----HHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            4457899999999999    43322  23467889999999999999999999999999999999999887777776654


Q ss_pred             hHHhHhhcC--Cceec--cCCchhhhhhc-ccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHH
Q 008564          141 SEVSEFLFG--SGFAI--AEGPLWMGRRR-AVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLT  215 (561)
Q Consensus       141 ~~~~~~~~g--~~l~~--~~g~~w~~~Rr-~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~  215 (561)
                      ..... ++|  .++..  .+|+.|+++|| ++.++|+.++++.+. +.+.++++.++++|.+....+..+|+.+.+..++
T Consensus       109 ~~~~~-~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~  186 (519)
T PLN00168        109 VASSR-LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFA-PARAWVRRVLVDKLRREAEDAAAPRVVETFQYAM  186 (519)
T ss_pred             ccchh-hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence            32222 222  23333  68999999886 799999999999999 8999999999999987555556789999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccC-cchhhhHhhhhcc--chhhHHHHHHHHHHHHHHHHHHHHH
Q 008564          216 LDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTD-VLPYWKVKALCKI--VPRQIKAEKAVTVIRKTVEELIIKC  292 (561)
Q Consensus       216 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~~i~~~  292 (561)
                      .++++.++||.+++.     +....+............. ......+|.+...  .....+..+..+.+.+++..+++++
T Consensus       187 ~~ii~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (519)
T PLN00168        187 FCLLVLMCFGERLDE-----PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDAR  261 (519)
T ss_pred             HHHHHHHHcCCCcCh-----hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988752     1222222222221111111 1011112222111  1123445567788888999999887


Q ss_pred             HHHHHhhccccCcccccCCCCchHHHHHHhcc------cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHH
Q 008564          293 KEIVETEGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLI  366 (561)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~------~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~  366 (561)
                      ++..+...+.....+.......|+++.|++..      ..++++++.++++++++||+|||+++++|++++|++|     
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~-----  336 (519)
T PLN00168        262 REYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKN-----  336 (519)
T ss_pred             HHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhC-----
Confidence            75432110000000000012457888888643      2489999999999999999999999999999999999     


Q ss_pred             HHHhhhhhhhchhHHHHHHHHHHHHhCC--CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCC
Q 008564          367 RFTLRNRLLEDCNSLMKAQEEIDRVLQG--RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAG  444 (561)
Q Consensus       367 ~~~~~~~~~~~p~~~~klr~Ei~~~~~~--~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G  444 (561)
                                 |++|+|+++||++++++  +.++++++++||||+|||+|+||++|+++..++|.+.+|+.++||.||||
T Consensus       337 -----------P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkG  405 (519)
T PLN00168        337 -----------PSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKG  405 (519)
T ss_pred             -----------HHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCC
Confidence                       99999999999999974  45899999999999999999999999999988899999999999999999


Q ss_pred             CEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCC---CCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceE
Q 008564          445 QDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMP---NESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNF  521 (561)
Q Consensus       445 ~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~  521 (561)
                      |.|+++.+++||||++|+||++|+||||++++...   ........++|||+|+|+|+|++||++|++++++.|+++|+|
T Consensus       406 t~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  485 (519)
T PLN00168        406 ATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEW  485 (519)
T ss_pred             CEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccc
Confidence            99999999999999999999999999998642110   011234579999999999999999999999999999999999


Q ss_pred             EecCCCccccc--cceeeecCCCeeEEEEEecC
Q 008564          522 ELVPDQNINMT--TGATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       522 ~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~  552 (561)
                      ++.++.+++..  .+.+..+++++.|++++|..
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        486 KEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            99876555543  34567778899999999863


No 16 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.2e-68  Score=560.71  Aligned_cols=452  Identities=23%  Similarity=0.340  Sum_probs=353.7

Q ss_pred             CCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHhH
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (561)
                      .||||.++|++|+    +..+ ..+++..+.+|+++||+||++++|++++|+++||+++++++.++...|.+++......
T Consensus        35 ~pPgp~~~P~iG~----~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         35 LPPGPRGWPVLGN----LPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCccCCCCCcccc----HHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            5889999999999    4444 3457889999999999999999999999999999999999988766777765332222


Q ss_pred             hh---cCCceeccCCchhhhhhcccC-cccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHH
Q 008564          146 FL---FGSGFAIAEGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (561)
Q Consensus       146 ~~---~g~~l~~~~g~~w~~~Rr~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~  221 (561)
                      .+   ++.+++..+|+.|+++|+++. +.|+.+.++.+. +.++++++.+++.|.+. .+++++|+.++++.+++|+++.
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~-~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFR-HVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhH-HHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHH
Confidence            22   234455667999999999998 899999999999 89999999999999764 3467899999999999999999


Q ss_pred             HhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008564          222 SVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVP--RQIKAEKAVTVIRKTVEELIIKCKEIVETE  299 (561)
Q Consensus       222 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  299 (561)
                      ++||.++...+.+ +....+...+...............+|++.++..  ...+..+....+.+++.++++++++..+..
T Consensus       188 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  266 (517)
T PLN02687        188 AMVGRRVFAGDGD-EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG  266 (517)
T ss_pred             HHhCccccccCCc-chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999987543322 2222333333332221111111112232222211  234455667778888888888776543211


Q ss_pred             ccccCcccccCCCCchHHHHHHhcc---------cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHh
Q 008564          300 GERIDDEEYVNDSDPSILRFLLASR---------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTL  370 (561)
Q Consensus       300 ~~~~~~~~~~~~~~~~ll~~ll~~~---------~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~  370 (561)
                                +....|+++.+++..         ..++++++.+++.++++||+|||+++++|++++|++|         
T Consensus       267 ----------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~---------  327 (517)
T PLN02687        267 ----------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRH---------  327 (517)
T ss_pred             ----------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhC---------
Confidence                      122457999998642         2488999999999999999999999999999999999         


Q ss_pred             hhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEE
Q 008564          371 RNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  449 (561)
Q Consensus       371 ~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  449 (561)
                             |++|+|+++||++++++ +.++++++++||||+|||+|+||++|+++..++|.+.+|+.++||.||+||.|.+
T Consensus       328 -------P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~  400 (517)
T PLN02687        328 -------PDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLV  400 (517)
T ss_pred             -------HHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEE
Confidence                   99999999999999874 5689999999999999999999999999988889999999999999999999999


Q ss_pred             ecccccCCCcCCCCCCCCCCCCCCCCCCCCC--CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC
Q 008564          450 SVYNIHHSSQVWERAEEFLPERFDLEGPMPN--ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ  527 (561)
Q Consensus       450 ~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~  527 (561)
                      +.+++||||++|+||++|+||||++++....  .......++|||+|+|.|+|++||.+|+++++|+|+++|+|++.++.
T Consensus       401 ~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  480 (517)
T PLN02687        401 NVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQ  480 (517)
T ss_pred             ecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCC
Confidence            9999999999999999999999986432111  11234579999999999999999999999999999999999998654


Q ss_pred             ---ccccc--cceeeecCCCeeEEEEEec
Q 008564          528 ---NINMT--TGATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       528 ---~~~~~--~~~~~~~~~~~~v~~~~r~  551 (561)
                         ++.+.  ...+..+..++.|++++|.
T Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        481 TPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             CcccCCcccccceeeecCCCeEEeeccCC
Confidence               23322  2334455567888888884


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.9e-68  Score=557.14  Aligned_cols=440  Identities=20%  Similarity=0.297  Sum_probs=337.4

Q ss_pred             cCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHh
Q 008564           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVS  144 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  144 (561)
                      +.||||.++|++|+.+..+.....+.++..+.+++++||+||++++|++++|+++||+++++++.+++..|.++..... 
T Consensus        38 ~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~-  116 (490)
T PLN02500         38 NLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI-  116 (490)
T ss_pred             CCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH-
Confidence            3588999999999943322111124567889999999999999999999999999999999999887665644322112 


Q ss_pred             HhhcC-CceeccCCchhhhhhcccCcccchHhHHH-HHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHH
Q 008564          145 EFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSV-IVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLS  222 (561)
Q Consensus       145 ~~~~g-~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~  222 (561)
                      ..++| .++++.+|+.|+++|+++.+.|+..+++. +. +.+.+.+..+++.+.    .++.+|+.+.++.+++|+++++
T Consensus       117 ~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~-~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~vi~~~  191 (490)
T PLN02500        117 GGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLL-KEVERHTLLVLDSWK----ENSTFSAQDEAKKFTFNLMAKH  191 (490)
T ss_pred             HHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHHHHhC----CCCCEEehHHHHHHHHHHHHHH
Confidence            22334 46778899999999999999999988876 44 677777777777663    3457999999999999999999


Q ss_pred             hhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008564          223 VFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGER  302 (561)
Q Consensus       223 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  302 (561)
                      +||.+.+.     .....+...+......... .+. .+|.     ...++..++.+.+.+++.++++++++..+.+.. 
T Consensus       192 ~fg~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~-~~p~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  258 (490)
T PLN02500        192 IMSMDPGE-----EETEQLKKEYVTFMKGVVS-APL-NFPG-----TAYRKALKSRATILKFIERKMEERIEKLKEEDE-  258 (490)
T ss_pred             HhCCCCCc-----hHHHHHHHHHHHHHhhhhc-chh-cCCC-----cccHHHHHHHHHHHHHHHHHHHHHHHhhhcccC-
Confidence            99987532     1112222211111111100 010 0111     112445566778888888888887664432210 


Q ss_pred             cCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHH
Q 008564          303 IDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLM  382 (561)
Q Consensus       303 ~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~  382 (561)
                             .....|+++.+++.. +++++++.+++.++++||+|||+++++|++++|++|                |++|+
T Consensus       259 -------~~~~~d~l~~ll~~~-~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~----------------Pevq~  314 (490)
T PLN02500        259 -------SVEEDDLLGWVLKHS-NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGC----------------PKAVQ  314 (490)
T ss_pred             -------CCCcchHHHHHHhcc-CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhC----------------HHHHH
Confidence                   112357999998753 589999999999999999999999999999999999                99999


Q ss_pred             HHHHHHHHHhC------CCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccC
Q 008564          383 KAQEEIDRVLQ------GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHH  456 (561)
Q Consensus       383 klr~Ei~~~~~------~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~  456 (561)
                      |+++||+++++      ++.++++|+++||||+|||+|+||++|++|.. +|.+.+|+.++||.|||||.|+++.|++||
T Consensus       315 kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hr  393 (490)
T PLN02500        315 ELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHL  393 (490)
T ss_pred             HHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhccc
Confidence            99999999863      34689999999999999999999999999985 577789999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCCCCCCCCCCC----CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccccc
Q 008564          457 SSQVWERAEEFLPERFDLEGPMPN----ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMT  532 (561)
Q Consensus       457 d~~~~~dP~~F~P~R~l~~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~  532 (561)
                      ||++|+||++|+||||++++....    .......|+|||+|+|.|+|++||++|+++++|+|+++|+|++.+++.... 
T Consensus       394 dp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-  472 (490)
T PLN02500        394 DSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-  472 (490)
T ss_pred             CcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-
Confidence            999999999999999986432111    012456799999999999999999999999999999999999986654322 


Q ss_pred             cceeeecCCCeeEEEEEe
Q 008564          533 TGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       533 ~~~~~~~~~~~~v~~~~r  550 (561)
                      .. ...+++|+.|++++-
T Consensus       473 ~~-~~~~~~~l~~~~~~~  489 (490)
T PLN02500        473 FP-FVDFPKGLPIRVRRI  489 (490)
T ss_pred             cc-cccCCCCceEEEEeC
Confidence            12 234457999998863


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.4e-68  Score=557.72  Aligned_cols=445  Identities=30%  Similarity=0.486  Sum_probs=359.0

Q ss_pred             CCCCCCCCccCCccccHHhhh-cccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHH--
Q 008564           67 QSDESNIPVASAKLDDVTDLL-GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEV--  143 (561)
Q Consensus        67 ~pgp~~lP~ig~~~~~~~~~~-~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~--  143 (561)
                      ||||+++|++|+    +..+. .+.+++.+.+|+++|||||+++++++++++|+||+++++|+.+.+..+........  
T Consensus         1 Ppgp~~~p~~G~----~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGN----LLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBT----HHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeE----HHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccc
Confidence            789999999999    65555 47889999999999999999999999999999999999999887655655432222  


Q ss_pred             --hHhhcCCceeccCCchhhhhhcccCcccchH-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHH
Q 008564          144 --SEFLFGSGFAIAEGPLWMGRRRAVAPSLHKK-YLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (561)
Q Consensus       144 --~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~-~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~  220 (561)
                        .....+.++++.+|+.|+.+|+.+.+.|+.. .+ .+. +.+++.++.+++.|.+....++.+|+.++++.+++|+++
T Consensus        77 ~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~  154 (463)
T PF00067_consen   77 IFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLE-PLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIG  154 (463)
T ss_dssp             HHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHH-HHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccceeeeecccccccccccc
Confidence              2346678899999999999999999999988 55 777 899999999999999876666689999999999999999


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcc--hhhhHhhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          221 LSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVL--PYWKVKALCKIV-PRQIKAEKAVTVIRKTVEELIIKCKEIVE  297 (561)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  297 (561)
                      .++||.+++.++  ++....+...+...........  ....+|++..+. +..+...++.+.+.+++..+++++++..+
T Consensus       155 ~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (463)
T PF00067_consen  155 RVLFGKDFGSLD--DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELD  232 (463)
T ss_dssp             HHHHSSHHHGTT--HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             cccccceeeecc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999987543  2222222233322221111110  112234333222 23445566778888889999988887665


Q ss_pred             hhccccCcccccCCCCchHHHHHHhcc------cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhh
Q 008564          298 TEGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLR  371 (561)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~ll~~ll~~~------~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~  371 (561)
                      ..          .....|+++.++...      ++++.+++.++++.+++||+|||+++++|++++|++|          
T Consensus       233 ~~----------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~----------  292 (463)
T PF00067_consen  233 DG----------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKN----------  292 (463)
T ss_dssp             SS----------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----------
T ss_pred             cc----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence            43          134677899888875      2689999999999999999999999999999999999          


Q ss_pred             hhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEe
Q 008564          372 NRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMIS  450 (561)
Q Consensus       372 ~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~  450 (561)
                            |++|+|+++||++++++ +.++.+++.+||||+|||+||||++|+++..++|.+.+|+.++||.|||||.|+++
T Consensus       293 ------P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~  366 (463)
T PF00067_consen  293 ------PEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVS  366 (463)
T ss_dssp             ------HHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEE
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                  99999999999999965 36899999999999999999999999999778888899999999999999999999


Q ss_pred             cccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccc
Q 008564          451 VYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNIN  530 (561)
Q Consensus       451 ~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~  530 (561)
                      .+++|+||++|+||++|+||||++...  ........++|||.|+|.|+|++||++|+++++|+||++|+|+++++....
T Consensus       367 ~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~  444 (463)
T PF00067_consen  367 IYALHRDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPE  444 (463)
T ss_dssp             HHHHTTSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGG
T ss_pred             ccccccccccccccccccccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCC
Confidence            999999999999999999999987643  123467789999999999999999999999999999999999998766554


Q ss_pred             cccc--eeeecCCCeeEEE
Q 008564          531 MTTG--ATIHTTNGLYMKL  547 (561)
Q Consensus       531 ~~~~--~~~~~~~~~~v~~  547 (561)
                      ....  .+..++.++.|+|
T Consensus       445 ~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  445 PQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             EEECSCSSSEEESSSEEEE
T ss_pred             CccccCceEeeCCCcEEeC
Confidence            4322  3555566788765


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.3e-67  Score=554.55  Aligned_cols=451  Identities=22%  Similarity=0.338  Sum_probs=341.6

Q ss_pred             cccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhH
Q 008564           63 LTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (561)
Q Consensus        63 ~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (561)
                      +.+.||||.++|++|+    +..+...+++..+.+|+++||+||++++|+.++|+++||+++++++.+.+..|.+++...
T Consensus        27 ~~~~ppgp~~~p~~G~----l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         27 RYKLPPGPSPLPVIGN----LLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             CCCCCcCCCCCCeecc----HHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            4456899999999999    555545568899999999999999999999999999999999999987766666554322


Q ss_pred             HhHhh-cC-Cce-eccCCchhhhhhcc-cCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHH
Q 008564          143 VSEFL-FG-SGF-AIAEGPLWMGRRRA-VAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDV  218 (561)
Q Consensus       143 ~~~~~-~g-~~l-~~~~g~~w~~~Rr~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dv  218 (561)
                      ..... .| .++ +..+|+.|+.+|+. +.+.|+...+..+. +.+++.++++++.|.+....++++|+.+++..+++|+
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dv  181 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFK-HVREEEARRMMDKINKAADKSEVVDISELMLTFTNSV  181 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHH
Confidence            11111 22 223 34569999999998 88999999999988 9999999999999987655677899999999999999


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhh---hccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008564          219 IGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKAL---CKIVPRQIKAEKAVTVIRKTVEELIIKCKEI  295 (561)
Q Consensus       219 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  295 (561)
                      ++.++||.+++..+   +....+...+...............+|++   ..+.............+.+++.+.++++.+.
T Consensus       182 i~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        182 VCRQAFGKKYNEDG---EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHHHhCCccCccc---hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999886532   22233333332222111111111111211   1111111222334455666666666654321


Q ss_pred             HHhhccccCcccccCCCCchHHHHHHhcc------cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHH
Q 008564          296 VETEGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFT  369 (561)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~------~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~  369 (561)
                      ...           .....++++.|++..      .+++++++.++++++++||+|||+++|+|++++|++|        
T Consensus       259 ~~~-----------~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~--------  319 (502)
T PLN02966        259 KRV-----------KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKY--------  319 (502)
T ss_pred             ccc-----------ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhC--------
Confidence            000           012346888877532      2478999999999999999999999999999999999        


Q ss_pred             hhhhhhhchhHHHHHHHHHHHHhCC---CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCE
Q 008564          370 LRNRLLEDCNSLMKAQEEIDRVLQG---RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQD  446 (561)
Q Consensus       370 ~~~~~~~~p~~~~klr~Ei~~~~~~---~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~  446 (561)
                              |++|+|+++||+++++.   +.++++|+++||||+|||+|+||++|++|..++|.+.+|+.++||.|||||.
T Consensus       320 --------P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~  391 (502)
T PLN02966        320 --------PQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTT  391 (502)
T ss_pred             --------HHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCE
Confidence                    99999999999999863   3579999999999999999999999999998888889999999999999999


Q ss_pred             EEEecccccCCCcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecC
Q 008564          447 IMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVP  525 (561)
Q Consensus       447 v~~~~~~~~~d~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~  525 (561)
                      |.++++++||||++| +||++|+||||+++..  ........|+|||+|+|+|+|++||++|+++++|+|+++|+|++.+
T Consensus       392 V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~  469 (502)
T PLN02966        392 VNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPN  469 (502)
T ss_pred             EEEecccccCCcccccCChhhCChhhhcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCC
Confidence            999999999999999 9999999999985431  1122456899999999999999999999999999999999999987


Q ss_pred             CCc---cccc--cceeeecCCCeeEEEEEecC
Q 008564          526 DQN---INMT--TGATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       526 ~~~---~~~~--~~~~~~~~~~~~v~~~~r~~  552 (561)
                      +.+   +.++  .+.+..+. + ++++++|+.
T Consensus       470 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~  499 (502)
T PLN02966        470 GMKPDDINMDVMTGLAMHKS-Q-HLKLVPEKV  499 (502)
T ss_pred             CCCcccCCcccccCeeeccC-C-CeEEEEEeC
Confidence            652   3322  24443333 3 566666653


No 20 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1e-67  Score=556.79  Aligned_cols=449  Identities=21%  Similarity=0.321  Sum_probs=342.3

Q ss_pred             cCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHh
Q 008564           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVS  144 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  144 (561)
                      +.||||.++|++|+    +..+ ....+..+.+|+++||+||++++|+.++|+++||+++++++.+++..|.+++.....
T Consensus        36 ~~ppgp~~~Pl~G~----l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         36 PYPPGPKGLPIIGN----MLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCcCCCCCCeecc----HHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            46899999999999    4333 334567899999999999999999999999999999999998776667665433222


Q ss_pred             Hhhc---CCceeccCCchhhhhhcc-cCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHH
Q 008564          145 EFLF---GSGFAIAEGPLWMGRRRA-VAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (561)
Q Consensus       145 ~~~~---g~~l~~~~g~~w~~~Rr~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~  220 (561)
                      ....   +.+++..+|+.|+++|++ +.+.|+...++.+. +.. ++++.+++++.+  ..|+++|+.+++..+++|+++
T Consensus       111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWA-SVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHH-HHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHH
Confidence            2222   356777889999999998 57999999888877 654 578888888864  346789999999999999999


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008564          221 LSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVP--RQIKAEKAVTVIRKTVEELIIKCKEIVET  298 (561)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  298 (561)
                      .++||.+++.  ..+++.+.+........    .......+|++..+.+  ..++..+..+.+.+++.++++++.+....
T Consensus       187 ~~~fG~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        187 RAAFGSSSNE--GQDEFIKILQEFSKLFG----AFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             hHhhcCcccc--hHHHHHHHHHHHHHHhC----CccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999987643  12223333322222111    0000111222222211  23455667778888888888877654332


Q ss_pred             hccccCcccccCCCCchHHHHHHhcc---------------cCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchh
Q 008564          299 EGERIDDEEYVNDSDPSILRFLLASR---------------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEME  363 (561)
Q Consensus       299 ~~~~~~~~~~~~~~~~~ll~~ll~~~---------------~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~  363 (561)
                      .......    .+...|+++.+++..               ..++++++.++++++++||+|||+++++|++++|++|  
T Consensus       261 ~~~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~--  334 (516)
T PLN02183        261 QNADNDS----EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKS--  334 (516)
T ss_pred             ccccccc----ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhC--
Confidence            1100000    112357888888632               1378999999999999999999999999999999999  


Q ss_pred             HHHHHHhhhhhhhchhHHHHHHHHHHHHhC-CCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeC
Q 008564          364 SLIRFTLRNRLLEDCNSLMKAQEEIDRVLQ-GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVN  442 (561)
Q Consensus       364 ~~~~~~~~~~~~~~p~~~~klr~Ei~~~~~-~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip  442 (561)
                                    |++|+|+++|++++++ ++.++++++.+||||+|||+|+||++|++|... |.+.+|+.++||.||
T Consensus       335 --------------Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IP  399 (516)
T PLN02183        335 --------------PEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIP  399 (516)
T ss_pred             --------------HHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEEC
Confidence                          9999999999999998 456899999999999999999999999999976 566788889999999


Q ss_pred             CCCEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEE
Q 008564          443 AGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFE  522 (561)
Q Consensus       443 ~G~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~  522 (561)
                      |||.|.++.+++||||++|+||++|+||||++++.. ........|+|||+|+|.|+|++||++|+++++|+|+++|+|+
T Consensus       400 kGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~  478 (516)
T PLN02183        400 KRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWE  478 (516)
T ss_pred             CCCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEE
Confidence            999999999999999999999999999999864321 1112456899999999999999999999999999999999999


Q ss_pred             ecCCCc---ccccc--ceeeecCCCeeEEEEEe
Q 008564          523 LVPDQN---INMTT--GATIHTTNGLYMKLRQR  550 (561)
Q Consensus       523 ~~~~~~---~~~~~--~~~~~~~~~~~v~~~~r  550 (561)
                      +.++..   +....  +.+..+...+.+.+++|
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        479 LPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             cCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            987643   32222  33433444677777777


No 21 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.1e-67  Score=554.04  Aligned_cols=463  Identities=19%  Similarity=0.283  Sum_probs=356.9

Q ss_pred             HhhcccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCch
Q 008564           60 TKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGL  139 (561)
Q Consensus        60 ~~~~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~  139 (561)
                      .+.+.+.||||.++|++|+    +..+ +..++..+.+|+++||++|++++|+.++|+++||+++++++.+++..|.+++
T Consensus        27 ~~~~~~~ppgp~~~pl~G~----~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~  101 (514)
T PLN03112         27 MRKSLRLPPGPPRWPIVGN----LLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRP  101 (514)
T ss_pred             ccCCCCCccCCCCCCeeee----HHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCC
Confidence            3334457899999999999    4443 3457889999999999999999998899999999999999987766777765


Q ss_pred             hhHHh-HhhcC--CceeccCCchhhhhhccc-CcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHH
Q 008564          140 VSEVS-EFLFG--SGFAIAEGPLWMGRRRAV-APSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLT  215 (561)
Q Consensus       140 ~~~~~-~~~~g--~~l~~~~g~~w~~~Rr~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~  215 (561)
                      ..... ...+|  .+++..+|+.|+.+|+++ .+.|+.++++.+. +.+.+.++.+++.+.+....++++|+.+.++.++
T Consensus       102 ~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~-~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~  180 (514)
T PLN03112        102 RTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFA-KHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFS  180 (514)
T ss_pred             CcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhh-HHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHH
Confidence            43211 22233  334567899999999995 5689999999999 8889999999998776555577899999999999


Q ss_pred             HHHHHHHhhcccCCCCCC-CChhHHHHHHHHHHHHHhccCcchhhhHhhhhccch--hhHHHHHHHHHHHHHHHHHHHHH
Q 008564          216 LDVIGLSVFNYNFDSLTA-DSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVP--RQIKAEKAVTVIRKTVEELIIKC  292 (561)
Q Consensus       216 ~dvi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~~i~~~  292 (561)
                      +|+++.++||.++..... +.+....+...................+|.+..+.+  ..++..+..+.+.++++.+++++
T Consensus       181 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  260 (514)
T PLN03112        181 MNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEH  260 (514)
T ss_pred             HHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998743322 112223333333332221111111111232222222  23455667777888888888877


Q ss_pred             HHHHHhhccccCcccccCCCCchHHHHHHhccc-----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHH
Q 008564          293 KEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIR  367 (561)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~  367 (561)
                      ++..+....        .....|+++.++++.+     .++++++.++++++++||+|||+++++|++++|++|      
T Consensus       261 ~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~------  326 (514)
T PLN03112        261 RRARSGKLP--------GGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKN------  326 (514)
T ss_pred             HHhhccccc--------CCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhC------
Confidence            654321100        1224579999987532     378999999999999999999999999999999999      


Q ss_pred             HHhhhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCE
Q 008564          368 FTLRNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQD  446 (561)
Q Consensus       368 ~~~~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~  446 (561)
                                |++|+|+++||++++++ +.++++++++||||+|||+|+||++|++|..++|.+.+|+.++||.|||||.
T Consensus       327 ----------P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~  396 (514)
T PLN03112        327 ----------PRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTR  396 (514)
T ss_pred             ----------hHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCE
Confidence                      99999999999999875 4689999999999999999999999999988888889999999999999999


Q ss_pred             EEEecccccCCCcCCCCCCCCCCCCCCCCCCC-CC-CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEec
Q 008564          447 IMISVYNIHHSSQVWERAEEFLPERFDLEGPM-PN-ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELV  524 (561)
Q Consensus       447 v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~-~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~  524 (561)
                      |.++++++||||++|+||++|+||||..++.. .. .......++|||+|+|.|+|++||++|+++++++||++|+|++.
T Consensus       397 v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~  476 (514)
T PLN03112        397 VFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPP  476 (514)
T ss_pred             EEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecC
Confidence            99999999999999999999999998643211 11 11234679999999999999999999999999999999999987


Q ss_pred             CCC---ccccc--cceeeecCCCeeEEEEEecC
Q 008564          525 PDQ---NINMT--TGATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       525 ~~~---~~~~~--~~~~~~~~~~~~v~~~~r~~  552 (561)
                      ++.   ++.+.  .+.++.+.+++.+++.+|..
T Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        477 DGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             CCCCcccCCCccccCcccccCCCeEEEeecCCc
Confidence            543   33332  24555667799999999963


No 22 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.6e-66  Score=542.87  Aligned_cols=457  Identities=17%  Similarity=0.236  Sum_probs=345.5

Q ss_pred             CCCCCCCCCccCCccccHHhhhcccch-HHHHHHHHHh-CCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHH
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGGALF-LPLFKWMNVY-GPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEV  143 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~~~~-~~l~~~~~ky-GpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  143 (561)
                      +||||.++|++|+    ++.+..+.++ ..+.++.++| |+||++++|++++|+|+||+++++++.+++..|.+++....
T Consensus        41 ~PPgp~~~P~iGn----l~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         41 LPPGPPGWPILGN----LPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCcCCCCCCeecc----HHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            6889999999999    6555433332 3456667776 79999999999999999999999999987777887764433


Q ss_pred             hHhhcC--Cceecc-CCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHH
Q 008564          144 SEFLFG--SGFAIA-EGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (561)
Q Consensus       144 ~~~~~g--~~l~~~-~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~  220 (561)
                      ...+.+  .++.+. +|+.|+.+|+++++.|.......+...+.+.+++.+++.+.+.+..++++|+.+.+..+++|+++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            332322  246655 59999999999999986655555554666677889999998655556689999999999999999


Q ss_pred             HHhhcccCCCCCC----CChhHHHHHHHHHHHHH---hccCcchhhhHh-hhhcc--chhhHHHHHHHHHHHHHHHHHHH
Q 008564          221 LSVFNYNFDSLTA----DSPVIDAVYTALKEAEL---RSTDVLPYWKVK-ALCKI--VPRQIKAEKAVTVIRKTVEELII  290 (561)
Q Consensus       221 ~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~l~~~--~~~~~~~~~~~~~l~~~~~~~i~  290 (561)
                      .++||.+++..+.    +.+....+.........   ......+...++ ++..+  .....+.......+.++++.+++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999998864321    12222222222221111   111111111122 22211  11223344456678888888888


Q ss_pred             HHHHHHHhhccccCcccccCCCCchHHHHHHhccc-----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHH
Q 008564          291 KCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESL  365 (561)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~  365 (561)
                      ++++...+...        .....|+++.+++..+     .++++++.++++++++||+|||+++++|++++|+.|    
T Consensus       277 ~~~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~----  344 (534)
T PLN03018        277 ERVELWREKGG--------KAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKN----  344 (534)
T ss_pred             HHHHHhhhccC--------CCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC----
Confidence            87654332110        1123578998886432     289999999999999999999999999999999999    


Q ss_pred             HHHHhhhhhhhchhHHHHHHHHHHHHhCC-CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCC
Q 008564          366 IRFTLRNRLLEDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAG  444 (561)
Q Consensus       366 ~~~~~~~~~~~~p~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G  444 (561)
                                  |++|+|+++||++++++ +.++.+++.+||||+|||+|+||++|++|...+|.+.+|+.++||.||||
T Consensus       345 ------------P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkG  412 (534)
T PLN03018        345 ------------PEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKG  412 (534)
T ss_pred             ------------HHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCC
Confidence                        99999999999999974 56899999999999999999999999999988899999999999999999


Q ss_pred             CEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCC-CC--CCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceE
Q 008564          445 QDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMP-NE--SNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNF  521 (561)
Q Consensus       445 ~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~-~~--~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~  521 (561)
                      +.|+++.+++||||++|+||++|+||||++++... ..  ......++|||+|+|.|+|++||.+|+++++|+|+++|+|
T Consensus       413 t~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  492 (534)
T PLN03018        413 SHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNW  492 (534)
T ss_pred             CEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceE
Confidence            99999999999999999999999999998543210 00  1245679999999999999999999999999999999999


Q ss_pred             EecCCC-ccccc--cceeeecCCCeeEEEEEec
Q 008564          522 ELVPDQ-NINMT--TGATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       522 ~~~~~~-~~~~~--~~~~~~~~~~~~v~~~~r~  551 (561)
                      ++.++. +++..  .+.+. .+.++.|++++|.
T Consensus       493 ~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~  524 (534)
T PLN03018        493 KLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRL  524 (534)
T ss_pred             EeCCCCCCCCcccccccee-cCCCeEEEEEecc
Confidence            987653 44332  24343 4579999999994


No 23 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.8e-66  Score=506.34  Aligned_cols=452  Identities=24%  Similarity=0.351  Sum_probs=370.7

Q ss_pred             CCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEc-cCCceEEEEeCHHHHHHHHhhCCCccCCch-h---h
Q 008564           67 QSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLA-AGPRNFVVVSDPAIAKHVLRNYGTKYAKGL-V---S  141 (561)
Q Consensus        67 ~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~-lg~~~~vvv~dp~~i~~il~~~~~~~~~~~-~---~  141 (561)
                      .|||+++|++|.... +...-....|+.....+++|||||+.. +|+...|.+.||+.++.+|++.+ .+.-++ .   +
T Consensus        52 IP~p~~~~~l~~l~~-~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   52 IPGPKGLPFLGLLWI-WRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEPW  129 (519)
T ss_pred             cCCCCCccHHHHHHH-HHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccchh
Confidence            789999999998332 112222567888999999999999999 78889999999999999999886 344442 1   1


Q ss_pred             HHhHhhc--CCceeccCCchhhhhhcccCccc-chHhHHHHHHHHHHHHHHHHHHHHHhhhcC--C-CceeHHHHHHHHH
Q 008564          142 EVSEFLF--GSGFAIAEGPLWMGRRRAVAPSL-HKKYLSVIVDCVFCKCAERLVERLQTDALN--G-TAVNMEEKFSQLT  215 (561)
Q Consensus       142 ~~~~~~~--g~~l~~~~g~~w~~~Rr~l~~~f-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~--g-~~vdl~~~~~~~~  215 (561)
                      ..-...+  ..|++..+|++|.+.|..+++.+ +++.++.+. +.++.++++++.+++.....  + .+.|+.+.+.+++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl-~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYL-PQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHh-hHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            1222233  37899999999999999999886 568889998 99999999999999886652  3 3779999999999


Q ss_pred             HHHHHHHhhcccCCCCCCC-ChhHHHHHHHHHHHHHhccCcchhhhHhhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHH
Q 008564          216 LDVIGLSVFNYNFDSLTAD-SPVIDAVYTALKEAELRSTDVLPYWKVKALCKI-VPRQIKAEKAVTVIRKTVEELIIKCK  293 (561)
Q Consensus       216 ~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~  293 (561)
                      ++.||.++||.+++.+.+. ++..+.+..+.+.+......+..  ..++++.+ .+.++++.++.+.+.+++..+|+.+.
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~--~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l  286 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLML--MPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNAL  286 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHh--cchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998763 34444444444444332221110  01222222 34688899999999999999999998


Q ss_pred             HHHHhhccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhh
Q 008564          294 EIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNR  373 (561)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~  373 (561)
                      +.++......      .+....++..|..+  +++.+++...++.+++||.||||.++.|+||+|++|            
T Consensus       287 ~~l~~~~~~~------~~~~~~l~~~L~~~--~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~Larn------------  346 (519)
T KOG0159|consen  287 EELEKQDSAG------SEYTGSLLELLLRK--ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARN------------  346 (519)
T ss_pred             HHHHhccccc------cchhHHHHHHHHHc--cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcC------------
Confidence            8877653210      11223344444433  489999999999999999999999999999999999            


Q ss_pred             hhhchhHHHHHHHHHHHHhCC--CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEec
Q 008564          374 LLEDCNSLMKAQEEIDRVLQG--RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISV  451 (561)
Q Consensus       374 ~~~~p~~~~klr~Ei~~~~~~--~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~  451 (561)
                          |++|+||++|+.++...  ..++.+++.+||||.||||||+||||.+|+.. |+..+|..++||.|||||.|.++.
T Consensus       347 ----P~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~  421 (519)
T KOG0159|consen  347 ----PEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFL  421 (519)
T ss_pred             ----hHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEee
Confidence                99999999999999975  46899999999999999999999999988876 778899999999999999999999


Q ss_pred             ccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCcccc
Q 008564          452 YNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINM  531 (561)
Q Consensus       452 ~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~  531 (561)
                      +.+.+||++|++|++|+||||+.++.   ...+.+.++|||.|+|+|+|+++|++|+.++||+|+++|+++..++.++++
T Consensus       422 ~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~  498 (519)
T KOG0159|consen  422 YVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEY  498 (519)
T ss_pred             hhhccChhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccc
Confidence            99999999999999999999997652   455788999999999999999999999999999999999999998899999


Q ss_pred             ccceeeecCCCeeEEEEEec
Q 008564          532 TTGATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       532 ~~~~~~~~~~~~~v~~~~r~  551 (561)
                      ...++..|..++..+|++|.
T Consensus       499 ~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  499 VYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             eeEEEEcCCCCcceeeeeCC
Confidence            98899999999999999985


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1e-66  Score=541.77  Aligned_cols=422  Identities=22%  Similarity=0.321  Sum_probs=341.2

Q ss_pred             CCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHhH
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (561)
                      .||||.++|++|+    +..++.++++..+.+++++||+||++++++.++|+++||+++++++.+++..+ +........
T Consensus        36 ~Ppgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~-~~~~~~~~~  110 (463)
T PLN02196         36 LPPGTMGWPYVGE----TFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF-KPTFPASKE  110 (463)
T ss_pred             CCCCCCCCCccch----HHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc-cccCchHHH
Confidence            4889999999999    55566678899999999999999999999999999999999999998776555 332222333


Q ss_pred             hhcC-CceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHHhh
Q 008564          146 FLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSVF  224 (561)
Q Consensus       146 ~~~g-~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~~f  224 (561)
                      ..+| .+++..+|+.|+++|+++.+.|+.++++.+. +.++++++++++.|.     ++++|+.++++.+++|+++.++|
T Consensus       111 ~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~-~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        111 RMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMV-PDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHH-HHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHc
Confidence            3455 4788889999999999999999999999998 888888888888763     45789999999999999999999


Q ss_pred             cccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 008564          225 NYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERID  304 (561)
Q Consensus       225 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  304 (561)
                      |.+...      ....+........ .....++.+ ++     ....++..++...+.+++.+.++++++.         
T Consensus       185 G~~~~~------~~~~~~~~~~~~~-~~~~~~~~~-~p-----~~~~~~~~~a~~~~~~~~~~~i~~~~~~---------  242 (463)
T PLN02196        185 GKDEVL------YREDLKRCYYILE-KGYNSMPIN-LP-----GTLFHKSMKARKELAQILAKILSKRRQN---------  242 (463)
T ss_pred             CCCCch------HHHHHHHHHHHHh-cchhccccc-CC-----CccchHHHHHHHHHHHHHHHHHHHHhhc---------
Confidence            986421      1111222111111 111111110 11     0113455567777888888888766532         


Q ss_pred             cccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHHHH
Q 008564          305 DEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLMKA  384 (561)
Q Consensus       305 ~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~kl  384 (561)
                           .....|+++.+++..++++++++.++++++++||+|||+++++|++++|++|                |++|+|+
T Consensus       243 -----~~~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~----------------P~vq~kl  301 (463)
T PLN02196        243 -----GSSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAEN----------------PSVLEAV  301 (463)
T ss_pred             -----CCCcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC----------------HHHHHHH
Confidence                 1123568888887666799999999999999999999999999999999999                9999999


Q ss_pred             HHHHHHHhCC----CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccCCCcC
Q 008564          385 QEEIDRVLQG----RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQV  460 (561)
Q Consensus       385 r~Ei~~~~~~----~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~  460 (561)
                      ++|++++++.    +.++++++++||||+|||+|+||++|+++... |.+.+|+.++||.||||+.|+++.+++||||++
T Consensus       302 ~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~  380 (463)
T PLN02196        302 TEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADI  380 (463)
T ss_pred             HHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchh
Confidence            9999998862    45899999999999999999999999998877 556788889999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccccccceeeecC
Q 008564          461 WERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTT  540 (561)
Q Consensus       461 ~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  540 (561)
                      |+||++|+||||+.+.       .+..++|||.|+|.|+|+++|++|+++++|.|+++|+|++.+++ .......+..|+
T Consensus       381 ~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~  452 (463)
T PLN02196        381 FSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQYGPFALPQ  452 (463)
T ss_pred             cCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceEEcccccCC
Confidence            9999999999998531       34679999999999999999999999999999999999997654 234455567799


Q ss_pred             CCeeEEEEEe
Q 008564          541 NGLYMKLRQR  550 (561)
Q Consensus       541 ~~~~v~~~~r  550 (561)
                      +|++|++++.
T Consensus       453 ~~~~~~~~~~  462 (463)
T PLN02196        453 NGLPIALSRK  462 (463)
T ss_pred             CCceEEEecC
Confidence            9999998764


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.1e-65  Score=533.06  Aligned_cols=439  Identities=18%  Similarity=0.246  Sum_probs=338.8

Q ss_pred             cccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhH
Q 008564           63 LTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (561)
Q Consensus        63 ~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (561)
                      +.++||||.++|++|+.+.....-+...++.++.+|+++||+||++++|+++.|+++||++++++|.+++..+..+.. .
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~-~   83 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP-K   83 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc-h
Confidence            345688999999999943321111234578889999999999999999999999999999999999887766654422 2


Q ss_pred             HhHhhcC-CceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHH
Q 008564          143 VSEFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (561)
Q Consensus       143 ~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~  221 (561)
                      ....++| .+++..+|+.|+++|+++.+.|+...+.....+.+.+.++++++.+    ..++++|+.+.+..++++++++
T Consensus        84 ~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~vi~~  159 (452)
T PLN03141         84 SLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAFEVLVK  159 (452)
T ss_pred             hHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHHHHHHH
Confidence            2334455 4688889999999999999999877776543255555555555544    2466899999999999999999


Q ss_pred             HhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008564          222 SVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGE  301 (561)
Q Consensus       222 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  301 (561)
                      ++||.+.+.      ....+...+........ .++.+ +|     .....+..++.+.+.+++..+++++++..+.+.+
T Consensus       160 ~~~G~~~~~------~~~~~~~~~~~~~~~~~-~~~~~-~p-----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  226 (452)
T PLN03141        160 ALISLEPGE------EMEFLKKEFQEFIKGLM-SLPIK-LP-----GTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEE  226 (452)
T ss_pred             HHcCCCchH------HHHHHHHHHHHHhhhHH-hCccC-CC-----chHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            999976531      11222222222111111 11110 11     0122344567788899999999888765432110


Q ss_pred             ccCcccccCCCCchHHHHHHhccc-CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhH
Q 008564          302 RIDDEEYVNDSDPSILRFLLASRE-EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNS  380 (561)
Q Consensus       302 ~~~~~~~~~~~~~~ll~~ll~~~~-~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~  380 (561)
                      . .     .....|+++.+++..+ .++++++.++++.+++||+|||+++++|++++|+.|                |++
T Consensus       227 ~-~-----~~~~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~----------------P~v  284 (452)
T PLN03141        227 D-E-----TGIPKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDC----------------PVA  284 (452)
T ss_pred             c-c-----cCChhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhC----------------hHH
Confidence            0 0     0113578998887653 489999999999999999999999999999999999                999


Q ss_pred             HHHHHHHHHHHhC-----CCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEeccccc
Q 008564          381 LMKAQEEIDRVLQ-----GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIH  455 (561)
Q Consensus       381 ~~klr~Ei~~~~~-----~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~  455 (561)
                      |+|+++|++++++     ++.++++++.+||||+|||+|+||++|+++. ++|.+.+|+.++||.||||+.|+++.+++|
T Consensus       285 ~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~  363 (452)
T PLN03141        285 LQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVH  363 (452)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhcc
Confidence            9999999998763     3458999999999999999999999999875 467788999999999999999999999999


Q ss_pred             CCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccccccce
Q 008564          456 HSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGA  535 (561)
Q Consensus       456 ~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  535 (561)
                      |||++|+||++|+||||+++.      .....|+|||+|+|.|+|++||.+|+++++|.|+++|+|++.++....   ..
T Consensus       364 ~d~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~---~~  434 (452)
T PLN03141        364 LDEENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIVN---FP  434 (452)
T ss_pred             CCchhcCCccccCcccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCeee---cc
Confidence            999999999999999998542      135679999999999999999999999999999999999987664332   24


Q ss_pred             eeecCCCeeEEEEEec
Q 008564          536 TIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       536 ~~~~~~~~~v~~~~r~  551 (561)
                      +..|..++.|++++|.
T Consensus       435 ~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        435 TVRMKRKLPIWVTRID  450 (452)
T ss_pred             cccCCCCceEEEEeCC
Confidence            7788999999999994


No 26 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.2e-65  Score=532.09  Aligned_cols=422  Identities=16%  Similarity=0.209  Sum_probs=331.1

Q ss_pred             CCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhHHhH
Q 008564           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (561)
Q Consensus        66 ~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (561)
                      .||||.++|++|+    +..+ ..+.+..+.+++++||++|++++|++++++++||+++++++.+++..+.++.......
T Consensus        32 ~ppgp~~~P~~G~----~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         32 LPPGTMGWPLFGE----TTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             CCCCCCCCCchhh----HHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            5789999999999    4433 2334678899999999999999999999999999999999987665554443222332


Q ss_pred             hhcC-CceeccCCchhhhhhcccCcccchHhHHH-HHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHHh
Q 008564          146 FLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSV-IVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSV  223 (561)
Q Consensus       146 ~~~g-~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~~  223 (561)
                       ++| .+++..+|+.|+.+|+++.+.|+...++. +. +.+.+.++++++++.    .++++|+.+.+..+++++++.++
T Consensus       107 -~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        107 -ILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLL-PKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             -HhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHHH
Confidence             344 46777799999999999999999988875 55 777777777777663    34579999999999999999999


Q ss_pred             hcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008564          224 FNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERI  303 (561)
Q Consensus       224 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  303 (561)
                      ||...+.      ....+...+...... ...++.+ +|     .+..++..++.+.+.+++.+.++++++.        
T Consensus       181 ~g~~~~~------~~~~~~~~~~~~~~~-~~~~~~~-lp-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------  239 (463)
T PLN02774        181 AGTLSKP------ISEEFKTEFFKLVLG-TLSLPID-LP-----GTNYRSGVQARKNIVRMLRQLIQERRAS--------  239 (463)
T ss_pred             cCCCChH------HHHHHHHHHHHHhcc-cccCCcC-CC-----ChhhhHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence            9975421      111222211111110 0011111 11     1123455567778888888888776532        


Q ss_pred             CcccccCCCCchHHHHHHhccc---CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhH
Q 008564          304 DDEEYVNDSDPSILRFLLASRE---EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNS  380 (561)
Q Consensus       304 ~~~~~~~~~~~~ll~~ll~~~~---~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~  380 (561)
                            .....|+++.++....   .++++++.+++.++++||+|||+++++|++++|++|                |++
T Consensus       240 ------~~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~----------------P~~  297 (463)
T PLN02774        240 ------GETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDH----------------PKA  297 (463)
T ss_pred             ------CCCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC----------------HHH
Confidence                  1123579998886432   379999999999999999999999999999999999                999


Q ss_pred             HHHHHHHHHHHhCC----CCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccC
Q 008564          381 LMKAQEEIDRVLQG----RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHH  456 (561)
Q Consensus       381 ~~klr~Ei~~~~~~----~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~  456 (561)
                      |+|+++|++++++.    +.++++++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|+++.+++||
T Consensus       298 q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~r  376 (463)
T PLN02774        298 LQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINY  376 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcC
Confidence            99999999999863    3589999999999999999999999999865 577888999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCcccccccee
Q 008564          457 SSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGAT  536 (561)
Q Consensus       457 d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~  536 (561)
                      ||++|+||++|+||||++++.     .....|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++.++..  ..+
T Consensus       377 dp~~~~dP~~F~PeRfl~~~~-----~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~--~~~  449 (463)
T PLN02774        377 DPFLYPDPMTFNPWRWLDKSL-----ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK--FPR  449 (463)
T ss_pred             CcccCCChhccCchhcCCCCc-----CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc--CCC
Confidence            999999999999999985431     1123599999999999999999999999999999999999987665332  234


Q ss_pred             eecCCCeeEEEEE
Q 008564          537 IHTTNGLYMKLRQ  549 (561)
Q Consensus       537 ~~~~~~~~v~~~~  549 (561)
                      ..|++|++|++++
T Consensus       450 ~~p~~g~~~~~~~  462 (463)
T PLN02774        450 VEAPNGLHIRVSP  462 (463)
T ss_pred             CCCCCCceEEeee
Confidence            5588999999874


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.6e-64  Score=522.00  Aligned_cols=432  Identities=18%  Similarity=0.247  Sum_probs=335.3

Q ss_pred             cCCCCCCCCCccCCccccHHhhh----cccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchh
Q 008564           65 ITQSDESNIPVASAKLDDVTDLL----GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~----~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (561)
                      +.||||.++|++|+    +..+.    ..+++.++.+++++||+||+++++++++|+|+||+++++++.+++..|.++..
T Consensus        30 ~lppgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         30 RLPPGSLGLPLVGE----TLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             CCcCCCcCCCchhh----HHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            46889999999999    54443    24578889999999999999999999999999999999999887766755432


Q ss_pred             hHHhHhhcC-CceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHH
Q 008564          141 SEVSEFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (561)
Q Consensus       141 ~~~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi  219 (561)
                      .... .++| +++++++|+.|+++|+++.+.++.+.+..+....+.+.++..++.|      ++++++.+.+..++++++
T Consensus       106 ~~~~-~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        106 GSIS-NLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSW------SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             HHHH-HHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhh------ccceehHHHHHHHHHHHH
Confidence            2223 3344 6788889999999999987544444444433111222333333332      236999999999999999


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008564          220 GLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETE  299 (561)
Q Consensus       220 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  299 (561)
                      ++++||.+.+..  .+.+...+.......   ....     +|++   .+..++..++.+++.+++.++++++++....+
T Consensus       179 ~~~~fg~~~~~~--~~~~~~~~~~~~~~~---~~~~-----~p~l---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  245 (472)
T PLN02987        179 VKQLMSFDPGEW--TESLRKEYVLVIEGF---FSVP-----LPLF---STTYRRAIQARTKVAEALTLVVMKRRKEEEEG  245 (472)
T ss_pred             HHHHcCCCChHH--HHHHHHHHHHHHhhh---hcCC-----CcCC---CchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999765321  111222222111111   1111     1221   23456677788899999999998876543221


Q ss_pred             ccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchh
Q 008564          300 GERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCN  379 (561)
Q Consensus       300 ~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~  379 (561)
                                .....|+++.|++..++++++++.++++++++||+|||+++++|++++|+.|                |+
T Consensus       246 ----------~~~~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~----------------P~  299 (472)
T PLN02987        246 ----------AEKKKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTET----------------PL  299 (472)
T ss_pred             ----------CcccccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhC----------------hH
Confidence                      1224579999998776799999999999999999999999999999999999                99


Q ss_pred             HHHHHHHHHHHHhC----CCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEeccccc
Q 008564          380 SLMKAQEEIDRVLQ----GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIH  455 (561)
Q Consensus       380 ~~~klr~Ei~~~~~----~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~  455 (561)
                      +|+|+++|++++.+    +..++++++.+||||+||++|+||++|+++.. +|.+.+|+.++||.||||+.|+++.+++|
T Consensus       300 ~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~  378 (472)
T PLN02987        300 ALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVH  378 (472)
T ss_pred             HHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhh
Confidence            99999999999875    23578999999999999999999999998754 57777899999999999999999999999


Q ss_pred             CCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccccccce
Q 008564          456 HSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGA  535 (561)
Q Consensus       456 ~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  535 (561)
                      |||++|+||++|+||||+++..   .......++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.++..  ..
T Consensus       379 ~d~~~~~~p~~F~PeRfl~~~~---~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~  453 (472)
T PLN02987        379 LDHEYFKDARTFNPWRWQSNSG---TTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FP  453 (472)
T ss_pred             CCcccCCCccccCcccCCCCCC---CCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cc
Confidence            9999999999999999986432   112345799999999999999999999999999999999999987776544  34


Q ss_pred             eeecCCCeeEEEEEecC
Q 008564          536 TIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       536 ~~~~~~~~~v~~~~r~~  552 (561)
                      +..|.+|+.+++++|..
T Consensus       454 ~~~p~~~~~~~~~~r~~  470 (472)
T PLN02987        454 TTRTQKRYPINVKRRDV  470 (472)
T ss_pred             cccCCCCceEEEEeccc
Confidence            88899999999999853


No 28 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-63  Score=521.12  Aligned_cols=443  Identities=24%  Similarity=0.368  Sum_probs=343.9

Q ss_pred             CCCCCCccCCccccHHhhhcccchHHHHHHHHHhC-CeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhh-HHhHh
Q 008564           69 DESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYG-PIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVS-EVSEF  146 (561)
Q Consensus        69 gp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyG-pV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~-~~~~~  146 (561)
                      +..+-++.|+    ....+. +.++.+..+.++++ .+++++..+.  ++++||+.+++|+.++...|.++..+ .....
T Consensus        45 ~~~~~~~~g~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~  117 (502)
T PLN02426         45 EVCRAYLTAS----WAKDFD-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGD  117 (502)
T ss_pred             CCCCCCccHH----HHHhcc-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHH
Confidence            3344556666    333332 34666667888887 5888876553  89999999999998776678776543 34455


Q ss_pred             hcCCceeccCCchhhhhhcccCcccchHhHHHHH-HHHHHHHHHHHHHHHHhhhcC--CCceeHHHHHHHHHHHHHHHHh
Q 008564          147 LFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV-DCVFCKCAERLVERLQTDALN--GTAVNMEEKFSQLTLDVIGLSV  223 (561)
Q Consensus       147 ~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~-~~~~~~~~~~l~~~l~~~~~~--g~~vdl~~~~~~~~~dvi~~~~  223 (561)
                      ++|+|++..+|+.|+++|+++++.|+...++.+. +.++++..+.+++.+.+....  |.++|+.++++.+++|+++.++
T Consensus       118 ~~g~gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  197 (502)
T PLN02426        118 LLGRGIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFS  197 (502)
T ss_pred             hcCCceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHH
Confidence            6788999999999999999999999998888764 367778888888888765432  4679999999999999999999


Q ss_pred             hcccCCCCCCC---ChhHHHHHHHHHHHHHhccCcchh-hhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008564          224 FNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPY-WKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETE  299 (561)
Q Consensus       224 fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  299 (561)
                      ||.+++.++.+   +++..++.........+....++. |.+..+.. .+..++..++.+.+.+++.++|+++++..   
T Consensus       198 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---  273 (502)
T PLN02426        198 FGLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLG---  273 (502)
T ss_pred             hCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            99998776532   234444443332222222222221 11111111 23345567778888899999988876531   


Q ss_pred             ccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchh
Q 008564          300 GERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCN  379 (561)
Q Consensus       300 ~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~  379 (561)
                                .....|+++.++++.  .+++++.++++++++||+|||+++|+|++|+|++|                |+
T Consensus       274 ----------~~~~~dll~~ll~~~--~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~----------------P~  325 (502)
T PLN02426        274 ----------FSASKDLLSRFMASI--NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKH----------------PE  325 (502)
T ss_pred             ----------cCCcchHHHHHHhcC--CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcC----------------HH
Confidence                      112457999999765  37889999999999999999999999999999999                99


Q ss_pred             HHHHHHHHHHHHhCCC--CCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccCC
Q 008564          380 SLMKAQEEIDRVLQGR--SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHS  457 (561)
Q Consensus       380 ~~~klr~Ei~~~~~~~--~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d  457 (561)
                      +|+|+++||++++++.  .++++++++||||+|||+|+||++|++|...+++..+++.++||.|||||.|.++.+++|||
T Consensus       326 v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd  405 (502)
T PLN02426        326 VASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRM  405 (502)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCC
Confidence            9999999999998743  58999999999999999999999999998875555555666999999999999999999999


Q ss_pred             CcCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCC--ccccccc
Q 008564          458 SQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ--NINMTTG  534 (561)
Q Consensus       458 ~~~~-~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~--~~~~~~~  534 (561)
                      |++| +||++|+||||++++..  .......++|||+|+|.|+|++||++|++++++.|+++|+|++.++.  .+....+
T Consensus       406 ~~~~G~dp~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  483 (502)
T PLN02426        406 ERIWGPDCLEFKPERWLKNGVF--VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPG  483 (502)
T ss_pred             ccccCcChhhcCccccCCCCCc--CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccce
Confidence            9999 89999999999864311  12234679999999999999999999999999999999999997443  2345556


Q ss_pred             eeeecCCCeeEEEEEecC
Q 008564          535 ATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       535 ~~~~~~~~~~v~~~~r~~  552 (561)
                      .+..|++|++|++++|.+
T Consensus       484 ~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        484 LTATVRGGLPVRVRERVR  501 (502)
T ss_pred             eEEecCCCEEEEEEEccC
Confidence            789999999999999854


No 29 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.1e-63  Score=525.57  Aligned_cols=435  Identities=19%  Similarity=0.287  Sum_probs=338.7

Q ss_pred             cCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCC--eEEEccCCceEEEEeCHHHHHHHHhhCCCccCCchhhH
Q 008564           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGP--IYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (561)
Q Consensus        65 ~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGp--V~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (561)
                      ++||||.++|++|+.+..+....+++++..+.+++++||+  ||++++++.+.|+++||+++++++.++ ..|.++....
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~  120 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPES  120 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchh
Confidence            4689999999999954433323346788999999999997  799999999999999999999999875 3555443222


Q ss_pred             HhHhhcC-CceeccCCchhhhhhcccCcccc-hHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHH
Q 008564          143 VSEFLFG-SGFAIAEGPLWMGRRRAVAPSLH-KKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (561)
Q Consensus       143 ~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~f~-~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~  220 (561)
                      ... .+| .++...+|+.|+++|+.+.+.|+ .+.++.+. +.+.+.+.++++++..    ++.+|+.+++..+++++++
T Consensus       121 ~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~-~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~vi~  194 (490)
T PLN02302        121 TVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYI-PYIEENVKSCLEKWSK----MGEIEFLTELRKLTFKIIM  194 (490)
T ss_pred             HHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHHHHHhcC----CCCEehHHHHHHHHHHHHH
Confidence            222 344 44666799999999999999995 67888888 8888988888888743    3469999999999999999


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008564          221 LSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEG  300 (561)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  300 (561)
                      +++||.+++.      ....+...+........ .+.. .+|.     ....+..++.+.+.+++.+.++++++..+...
T Consensus       195 ~~~~G~~~~~------~~~~~~~~~~~~~~~~~-~~~~-~~p~-----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  261 (490)
T PLN02302        195 YIFLSSESEL------VMEALEREYTTLNYGVR-AMAI-NLPG-----FAYHRALKARKKLVALFQSIVDERRNSRKQNI  261 (490)
T ss_pred             HHHcCCCChH------HHHHHHHHHHHHHHHhh-hCCc-CCCc-----hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence            9999986532      11122111111111000 0000 0110     11233445667788888888887765432211


Q ss_pred             cccCcccccCCCCchHHHHHHhccc----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhh
Q 008564          301 ERIDDEEYVNDSDPSILRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLE  376 (561)
Q Consensus       301 ~~~~~~~~~~~~~~~ll~~ll~~~~----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~  376 (561)
                               .....|+++.+++..+    +++++++.++++.+++||+|||+++++|++++|++|               
T Consensus       262 ---------~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~---------------  317 (490)
T PLN02302        262 ---------SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEH---------------  317 (490)
T ss_pred             ---------CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC---------------
Confidence                     1234578999987532    478999999999999999999999999999999999               


Q ss_pred             chhHHHHHHHHHHHHhCCC-----CCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEec
Q 008564          377 DCNSLMKAQEEIDRVLQGR-----SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISV  451 (561)
Q Consensus       377 ~p~~~~klr~Ei~~~~~~~-----~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~  451 (561)
                       |++|+|+++|+++++++.     .++++++++||||+|||+|+||++|++|... |.+.+|+.++||.||||+.|+++.
T Consensus       318 -P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-R~~~~d~~~~g~~Ip~Gt~v~~~~  395 (490)
T PLN02302        318 -PEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVF-REAKTDVEVNGYTIPKGWKVLAWF  395 (490)
T ss_pred             -HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccch-hcccCCEeECCEEECCCCEEEeeH
Confidence             999999999999998642     2789999999999999999999999998865 566789999999999999999999


Q ss_pred             ccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCcccc
Q 008564          452 YNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINM  531 (561)
Q Consensus       452 ~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~  531 (561)
                      +++||||++|+||++|+||||++.+      .....++|||+|+|.|+|++||.+|++++++.|+++|+|++.++. .+.
T Consensus       396 ~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~  468 (490)
T PLN02302        396 RQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKV  468 (490)
T ss_pred             HHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccc
Confidence            9999999999999999999998542      234579999999999999999999999999999999999998543 222


Q ss_pred             ccceeeecCCCeeEEEEEecC
Q 008564          532 TTGATIHTTNGLYMKLRQRQH  552 (561)
Q Consensus       532 ~~~~~~~~~~~~~v~~~~r~~  552 (561)
                      .......|.+++.+++++|..
T Consensus       469 ~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        469 MYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             eeCCCCCCCCCceEEEEeccC
Confidence            222347888999999999864


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.8e-59  Score=442.21  Aligned_cols=436  Identities=19%  Similarity=0.333  Sum_probs=338.8

Q ss_pred             CC-CCCCCCccCCccccHHhhhcccchHHHHHHHHHhCCeEEEccCCceEEEEeCHHHHHHHHhhCCCccCCch-hhHHh
Q 008564           67 QS-DESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGL-VSEVS  144 (561)
Q Consensus        67 ~p-gp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGpV~ri~lg~~~~vvv~dp~~i~~il~~~~~~~~~~~-~~~~~  144 (561)
                      || --.++||+|+++     .+++++.+++.+..+||||||++.++|+.+.++.||+....+++.....++-.. ...+.
T Consensus        33 PPli~gwiP~lG~a~-----~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   33 PPLIKGWIPWLGSAL-----AFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CcccccCcchhhHHH-----HhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            55 556699999944     368899999999999999999999999999999999999999987644444333 33567


Q ss_pred             HhhcCCceecc-CCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHH-HHhhhcCCCceeHHHHHHHHHHHHHHHH
Q 008564          145 EFLFGSGFAIA-EGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVER-LQTDALNGTAVNMEEKFSQLTLDVIGLS  222 (561)
Q Consensus       145 ~~~~g~~l~~~-~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~-l~~~~~~g~~vdl~~~~~~~~~dvi~~~  222 (561)
                      ...||.|+... ++....++.+++..++...+++.+. +.+.++..+..+. +.   .+|....+..+...+++.+.-..
T Consensus       108 ~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~-e~m~~el~~~f~~~~~---~s~~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  108 TPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLV-ELMLEELHAYFETSLG---ESGETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             hhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHH-HHHHHHHHHHHhcccc---cccchhHhhhhhHHHhhhhHHHh
Confidence            77899888764 6788889999999999999999998 6666666655554 33   24555566677777777666666


Q ss_pred             hhcccCCCCCCC-ChhHHHHHHHHHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008564          223 VFNYNFDSLTAD-SPVIDAVYTALKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGE  301 (561)
Q Consensus       223 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  301 (561)
                      .||...+.++++ ...+..+.+.+...    ...+|++      -+.+..++..++.+.+.+.+...|.++++..+    
T Consensus       184 l~~e~r~~~d~~~a~l~~dLd~~F~~~----d~~FP~~------LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s----  249 (486)
T KOG0684|consen  184 LGGEVRDQLDADVAKLYHDLDQGFQPF----DFLFPYN------LPIPLLRRRDRARKKISKIFSKIILDRRASIS----  249 (486)
T ss_pred             hhhhhhhhhcchHHHHHHHHhccccch----HhhcccC------CCcchhhhHHHHHHHHHHHHHHHHHHHHhccc----
Confidence            666655554322 12333332222211    1123321      12345555568888899999998888876432    


Q ss_pred             ccCcccccCCCCchHHHHHHhc---ccCCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhch
Q 008564          302 RIDDEEYVNDSDPSILRFLLAS---REEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDC  378 (561)
Q Consensus       302 ~~~~~~~~~~~~~~ll~~ll~~---~~~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p  378 (561)
                               ..+.|++..+++.   ..+.+++|+...++.++|||+.||+.|.+|++++|++|                |
T Consensus       250 ---------~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~----------------P  304 (486)
T KOG0684|consen  250 ---------KWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRH----------------P  304 (486)
T ss_pred             ---------cccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhC----------------H
Confidence                     2355788888872   22689999999999999999999999999999999999                9


Q ss_pred             hHHHHHHHHHHHHhCCC--CCChhhhcCCchhHHHhhhccccCCCCcccccccccCccCCC----CeeeCCCCEEEEecc
Q 008564          379 NSLMKAQEEIDRVLQGR--SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG----NYKVNAGQDIMISVY  452 (561)
Q Consensus       379 ~~~~klr~Ei~~~~~~~--~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~----g~~Ip~G~~v~~~~~  452 (561)
                      |+++.+++|+.+++|+.  .++++++++||.|+.||+|||||+||.+.++|. +.+|..+.    .|.||+|..|+++++
T Consensus       305 e~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~-v~~D~tv~~~~~~Y~Ip~G~~valsP~  383 (486)
T KOG0684|consen  305 EAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRK-VHEDLTVPGSDGEYVIPKGDIVALSPF  383 (486)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHh-hccceeeccCCcceecCCCCEEEeccc
Confidence            99999999999999853  489999999999999999999999988887755 45554443    399999999999999


Q ss_pred             cccCCCcCCCCCCCCCCCCCCCCCCCCCC--CCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccc
Q 008564          453 NIHHSSQVWERAEEFLPERFDLEGPMPNE--SNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNIN  530 (561)
Q Consensus       453 ~~~~d~~~~~dP~~F~P~R~l~~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~  530 (561)
                      .+|+||++|+||+.|+|+||+.+++..+.  ..-++.+||||+|+|.|||+.||.+|++.++..+|++||+|+++++-.+
T Consensus       384 ~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~  463 (486)
T KOG0684|consen  384 LLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPE  463 (486)
T ss_pred             cccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCC
Confidence            99999999999999999999966544322  2233456999999999999999999999999999999999999875444


Q ss_pred             ccc-ceeeecCCCeeEEEEEec
Q 008564          531 MTT-GATIHTTNGLYMKLRQRQ  551 (561)
Q Consensus       531 ~~~-~~~~~~~~~~~v~~~~r~  551 (561)
                      .+. ..+..|..++.++.+.|.
T Consensus       464 ~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  464 VDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCHHHhhcCCCCCceEEEeecC
Confidence            442 347888889999999885


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.8e-56  Score=458.54  Aligned_cols=409  Identities=13%  Similarity=0.185  Sum_probs=298.7

Q ss_pred             hcccCCCCCCCCCccCCccccHHhhhcccchHHHHHHHHHhCC-eEEEccCCceE-------EEEeCHHHHHHHHhh---
Q 008564           62 SLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGP-IYRLAAGPRNF-------VVVSDPAIAKHVLRN---  130 (561)
Q Consensus        62 ~~~~~~pgp~~lP~ig~~~~~~~~~~~~~~~~~l~~~~~kyGp-V~ri~lg~~~~-------vvv~dp~~i~~il~~---  130 (561)
                      .+.+.|||+.|+|++|+++.++.+.+..++..++.+.++|||+ ||+++++|.++       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3445699999999999988777767777888999999999999 99999988666       999999999999974   


Q ss_pred             -CCCccCCchhhHHhHhhcC-C---ceeccCCchhhhhhcccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCce
Q 008564          131 -YGTKYAKGLVSEVSEFLFG-S---GFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAV  205 (561)
Q Consensus       131 -~~~~~~~~~~~~~~~~~~g-~---~l~~~~g~~w~~~Rr~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~v  205 (561)
                       ++..+... +..... ++| +   +++..+|+.|+++|+++.+.|+ ..++.+. +.+.+.++.+++.|......|.++
T Consensus        94 ~~~~~~~~~-~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~-~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         94 DKRDVFTGT-YMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFI-PEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             cccccceee-eccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhhh-hHHHHHHHHHHHHHHHHHhhCCCc
Confidence             33334432 222233 556 4   6777889999999999999999 5778888 999999999999996543455679


Q ss_pred             eHHHHHHHHHHHHHHHHhhcccCCCCCCCChhHHHHHHHHHHHHHhccCcchhhh--Hh-hhhc----cchhh-HHHHHH
Q 008564          206 NMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWK--VK-ALCK----IVPRQ-IKAEKA  277 (561)
Q Consensus       206 dl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~l~~----~~~~~-~~~~~~  277 (561)
                      |+.+.+..+++|++++++||.+.+. +   ...+.+..........  ..++...  ++ .+..    ..+.. ......
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~-~---~l~~~~~~~~~~~~~~--~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~  243 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSE-T---ALGSDGPALIQKWLAL--QLAPLASTGLPHVLEELLLHTFPLPFFLVKSD  243 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcch-h---hhccchhHHHHHHHHH--HhhHHHHcCchHHHHHHhhcccCCchhhhhcc
Confidence            9999999999999999999986643 1   1111111111111000  0011100  00 0000    00000 000111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccCcccccCCCCchHHHHHHhcccCCChHHHHHHHHH-HHHhchhhHHHHHHHHHH
Q 008564          278 VTVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLS-MLVAGHETTGSVLTWTLY  356 (561)
Q Consensus       278 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~~~~~i~~~~~~-~l~AG~dTts~~l~~~l~  356 (561)
                      .+.+.+++.+.+.                        ++++...+  ++++++++.++++. +.++|++||+++++|++|
T Consensus       244 ~~~~~~~~~~~~~------------------------~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~  297 (480)
T PLN02648        244 YDKLYDFFRASAT------------------------EALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLK  297 (480)
T ss_pred             HHHHHHHHHHHHH------------------------HHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            1112222221111                        12222212  24899999999875 446677788889999999


Q ss_pred             HHhhchhHHHHHHhhhhhhhchh-HHHHHHHHHHHHhC--CCCCChhhhcCCchhHHHhhhccccCCCCcccccccccCc
Q 008564          357 LLSKEMESLIRFTLRNRLLEDCN-SLMKAQEEIDRVLQ--GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDD  433 (561)
Q Consensus       357 ~L~~~~~~~~~~~~~~~~~~~p~-~~~klr~Ei~~~~~--~~~~~~~~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~  433 (561)
                      +|++|                |+ +|+|+++|++++++  ++.++++++++||||++||+|+||++|+++...|++ .+|
T Consensus       298 ~L~~~----------------p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a-~~d  360 (480)
T PLN02648        298 WVGRA----------------GEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRA-RED  360 (480)
T ss_pred             HHHcC----------------CHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccccee-cCC
Confidence            99999                95 99999999999986  346899999999999999999999999999988775 566


Q ss_pred             cCCC----CeeeCCCCEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc---------CCCCCCChh
Q 008564          434 VLPG----NYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPF---------SGGPRKCVG  500 (561)
Q Consensus       434 ~~~~----g~~Ip~G~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~~~~~~~~~~~F---------g~G~r~C~G  500 (561)
                      +.++    ||.||||+.|+++.+.+||||++|+||++|+|+||+++...     ....+++|         |+|+|.|+|
T Consensus       361 ~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G  435 (480)
T PLN02648        361 FVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAG  435 (480)
T ss_pred             EEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCcc
Confidence            6664    79999999999999999999999999999999999854211     11234444         677899999


Q ss_pred             HHHHHHHHHHHHHHHHhcce-EEecCCCc
Q 008564          501 DQFALLEAIVALAILLQNMN-FELVPDQN  528 (561)
Q Consensus       501 ~~lA~~~~~~~la~ll~~f~-~~~~~~~~  528 (561)
                      ++||++|++++++.|+++|+ |++.++..
T Consensus       436 ~~~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        436 KDFVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             HHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence            99999999999999999998 99876543


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.5e-50  Score=411.29  Aligned_cols=377  Identities=29%  Similarity=0.445  Sum_probs=300.3

Q ss_pred             chHHHHHHHHHhCCeEEEccCCce--EEEEeCHHHHHHHHhhCC--CccCCch-hhHHhHhhcCCc-eeccCCchhhhhh
Q 008564           91 LFLPLFKWMNVYGPIYRLAAGPRN--FVVVSDPAIAKHVLRNYG--TKYAKGL-VSEVSEFLFGSG-FAIAEGPLWMGRR  164 (561)
Q Consensus        91 ~~~~l~~~~~kyGpV~ri~lg~~~--~vvv~dp~~i~~il~~~~--~~~~~~~-~~~~~~~~~g~~-l~~~~g~~w~~~R  164 (561)
                      .......+.+.||.++++...+..  .+++++++.++++++++.  ....... ........+|.+ +++.+|+.|.++|
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            344566677889999988875533  799999999999998763  1111111 111134455655 7888999999999


Q ss_pred             cccCcccchHhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceeHHHHHHHHHHHHHHHHhhcccCCCCCCCChhHHHHHHH
Q 008564          165 RAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTA  244 (561)
Q Consensus       165 r~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~  244 (561)
                      ++++++|+++.++.+. +.+.+.++++++.+ .  .. +.+++.+.+..+++++|+ .+||.+.+..       ..+...
T Consensus       104 kl~~~~F~~~~~~~~~-~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-------~~~~~~  170 (411)
T COG2124         104 KLLAPAFTPRALRGYR-PLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR-------PQLLRW  170 (411)
T ss_pred             HHhccccCHHHHHHHH-HHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-------HHHHHH
Confidence            9999999999999999 89999999888888 3  22 678899999999999999 9999876431       111111


Q ss_pred             HHHHHHhccCcchhhhHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccCCCCchHHHHHHhcc
Q 008564          245 LKEAELRSTDVLPYWKVKALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASR  324 (561)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~  324 (561)
                      .......   ..+     ... ......+..++...+.+++..+|++++.                ....|+++.|+.+.
T Consensus       171 ~~~~~~~---~~~-----~~~-~~~~~~~~~~a~~~~~~~~~~li~~rR~----------------~~~~dlls~l~~a~  225 (411)
T COG2124         171 SDALLLR---LDP-----DLG-PEEPWRRARAARRELDAYLRALIAERRA----------------APRDDLLSLLLSAE  225 (411)
T ss_pred             HHHHHhc---cCc-----ccC-CcccHHHHHHHHHHHHHHHHHHHHHhcc----------------CCcccHHHHHHHHh
Confidence            1111111   001     000 0123566778888999999999998871                34677999998765


Q ss_pred             c----CCChHHHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHHHHHHHHHHHhCCCCCChh
Q 008564          325 E----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLMKAQEEIDRVLQGRSPSFE  400 (561)
Q Consensus       325 ~----~~~~~~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~klr~Ei~~~~~~~~~~~~  400 (561)
                      +    .+|++||.++++++++||+|||+++|+|++|.|++|                |++++++++|.+.          
T Consensus       226 ~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~----------------P~~~~~l~~e~~~----------  279 (411)
T COG2124         226 DDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRH----------------PDQLAKLRAEPDR----------  279 (411)
T ss_pred             hCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHC----------------chHHHHHHhCcch----------
Confidence            4    289999999999999999999999999999999999                9999999998765          


Q ss_pred             hhcCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEecccccCCCcCCCCCCCCCCCCCCCCCCCCC
Q 008564          401 DIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPN  480 (561)
Q Consensus       401 ~l~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dP~~F~P~R~l~~~~~~~  480 (561)
                           ||+.++|+|+||++|+++. ++|++.+|++++|+.||||+.|+++.+++||||++|+||++|+|+||.       
T Consensus       280 -----~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------  346 (411)
T COG2124         280 -----PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------  346 (411)
T ss_pred             -----HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------
Confidence                 8999999999999999999 999999999999999999999999999999999999999999999994       


Q ss_pred             CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcceEEecCCCccccccceeeecCCCeeEEEEEe
Q 008564          481 ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQR  550 (561)
Q Consensus       481 ~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  550 (561)
                           ..|+|||+|+|.|+|.+||++|++++++.|+++|++....+ ........+..+..+..+.++.+
T Consensus       347 -----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 -----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             -----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence                 46999999999999999999999999999999999988766 22222333555555666666544


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=46.48  E-value=9.5  Score=34.36  Aligned_cols=44  Identities=9%  Similarity=0.170  Sum_probs=33.0

Q ss_pred             CCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEE
Q 008564          404 DLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  449 (561)
Q Consensus       404 ~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  449 (561)
                      .-..+.|||.|++-+....  .++-...+|+.++|..|||||.|..
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs--~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS--RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC--EEEEEEcCceEECCEEeCCCCEEEE
Confidence            4567789999998876532  3333446888889999999998765


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=42.29  E-value=18  Score=25.30  Aligned_cols=8  Identities=38%  Similarity=0.434  Sum_probs=6.0

Q ss_pred             CCCCCCCC
Q 008564          468 LPERFDLE  475 (561)
Q Consensus       468 ~P~R~l~~  475 (561)
                      ||||||+-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78899853


No 35 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=33.41  E-value=86  Score=24.81  Aligned_cols=47  Identities=23%  Similarity=0.261  Sum_probs=33.6

Q ss_pred             HhhhcccchHHHHHHHHHhCCeEEEccCC------ceEEEEeCHHHHHHHHhh
Q 008564           84 TDLLGGALFLPLFKWMNVYGPIYRLAAGP------RNFVVVSDPAIAKHVLRN  130 (561)
Q Consensus        84 ~~~~~~~~~~~l~~~~~kyGpV~ri~lg~------~~~vvv~dp~~i~~il~~  130 (561)
                      .++..+--.+.+.++.-+||+|..|.+|.      .-+||-.|-..++.....
T Consensus        24 rNLp~~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   24 RNLPFKITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             ecCCccccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            33444445678999999999999998764      346777777777766643


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=32.74  E-value=1.1e+02  Score=20.35  Aligned_cols=42  Identities=12%  Similarity=0.147  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHhchhhHHHHHHHHHHHHhhchhHHHHHHhhhhhhhchhHHHHHHHHH
Q 008564          331 QLRDDLLSMLVAGHETTGSVLTWTLYLLSKEMESLIRFTLRNRLLEDCNSLMKAQEEI  388 (561)
Q Consensus       331 ~i~~~~~~~l~AG~dTts~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~klr~Ei  388 (561)
                      ++..++..++-.|.|..+-.+.--|....-|                |+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVn----------------PeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVN----------------PEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCC----------------HHHHHHHHHHh
Confidence            4566677778889888888888888888888                77777666664


No 37 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=28.94  E-value=83  Score=21.24  Aligned_cols=35  Identities=17%  Similarity=0.306  Sum_probs=25.4

Q ss_pred             HHHHHHHhCCeEEEccCC----ceEEEEeCHHHHHHHHh
Q 008564           95 LFKWMNVYGPIYRLAAGP----RNFVVVSDPAIAKHVLR  129 (561)
Q Consensus        95 l~~~~~kyGpV~ri~lg~----~~~vvv~dp~~i~~il~  129 (561)
                      +.+...+||+|-++.+..    .-+|-..+.+.++.+..
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            456788999998887633    34677778998888875


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=28.51  E-value=47  Score=27.59  Aligned_cols=22  Identities=18%  Similarity=0.486  Sum_probs=16.6

Q ss_pred             CChhHHHHHHHHHHHHHHHHhc
Q 008564          497 KCVGDQFALLEAIVALAILLQN  518 (561)
Q Consensus       497 ~C~G~~lA~~~~~~~la~ll~~  518 (561)
                      .|.|+.||+.++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999874


No 39 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=23.66  E-value=34  Score=34.59  Aligned_cols=46  Identities=9%  Similarity=0.276  Sum_probs=33.5

Q ss_pred             cCCchhHHHhhhccccCCCCcccccccccCccCCCCeeeCCCCEEEEe
Q 008564          403 KDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMIS  450 (561)
Q Consensus       403 ~~lpyL~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~  450 (561)
                      ..-..+.|||.|++-+.-..  .++-...+|+.++|..||+||.|...
T Consensus       253 ~~~n~I~A~V~~~qtv~~G~--~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       253 SERNTIRACVHETQTVVDGS--AVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             cCCCceEEEEcCceEEecCC--EEEEEEcCceeeCCEEecCCCEEEEE
Confidence            34667889999998776532  23333468899999999999987543


No 40 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.48  E-value=63  Score=29.30  Aligned_cols=20  Identities=15%  Similarity=0.434  Sum_probs=17.9

Q ss_pred             ccccCCCcCCCCCCCCCCCC
Q 008564          452 YNIHHSSQVWERAEEFLPER  471 (561)
Q Consensus       452 ~~~~~d~~~~~dP~~F~P~R  471 (561)
                      +.-+-|+.+|.|.+.|+|.|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            45589999999999999988


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=20.37  E-value=47  Score=22.61  Aligned_cols=11  Identities=36%  Similarity=0.748  Sum_probs=9.2

Q ss_pred             cccCCCCCCCh
Q 008564          489 IPFSGGPRKCV  499 (561)
Q Consensus       489 ~~Fg~G~r~C~  499 (561)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999986


Done!