Query 008567
Match_columns 561
No_of_seqs 352 out of 3308
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:34:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008567.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008567hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 1E-183 4E-188 1475.3 37.0 529 1-548 3-534 (535)
2 1vco_A CTP synthetase; tetrame 100.0 3E-156 1E-160 1281.4 37.1 529 1-549 12-546 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 1E-155 4E-160 1275.5 38.9 527 1-550 3-540 (545)
4 2c5m_A CTP synthase; cytidine 100.0 7E-133 2E-137 978.2 19.6 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 4E-131 1E-135 974.1 17.2 273 1-273 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 1.1E-46 3.7E-51 386.3 21.7 273 282-555 10-283 (289)
7 2w7t_A CTP synthetase, putativ 100.0 4.8E-44 1.6E-48 363.8 15.9 251 298-557 9-265 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 4.7E-41 1.6E-45 355.2 14.5 276 203-548 68-375 (379)
9 3fij_A LIN1909 protein; 11172J 100.0 1.7E-28 5.8E-33 246.7 19.8 210 297-550 4-244 (254)
10 2a9v_A GMP synthase; structura 99.9 7.2E-26 2.5E-30 221.6 18.2 189 296-549 12-202 (212)
11 1qdl_B Protein (anthranilate s 99.9 5.9E-25 2E-29 212.0 19.9 181 300-544 4-193 (195)
12 1wl8_A GMP synthase [glutamine 99.9 4.6E-25 1.6E-29 211.3 17.1 183 299-547 2-187 (189)
13 4gud_A Imidazole glycerol phos 99.9 7.7E-26 2.6E-30 220.0 10.0 200 299-550 4-208 (211)
14 2vpi_A GMP synthase; guanine m 99.9 4.7E-25 1.6E-29 216.9 10.1 182 298-546 25-210 (218)
15 1i1q_B Anthranilate synthase c 99.9 1.6E-23 5.4E-28 201.4 18.0 188 298-547 1-190 (192)
16 1l9x_A Gamma-glutamyl hydrolas 99.9 3.2E-24 1.1E-28 222.2 12.4 206 296-550 29-280 (315)
17 3uow_A GMP synthetase; structu 99.9 4.9E-23 1.7E-27 228.2 20.5 205 298-546 8-229 (556)
18 3r75_A Anthranilate/para-amino 99.9 8.9E-24 3E-28 237.2 14.0 183 297-550 446-637 (645)
19 2ywj_A Glutamine amidotransfer 99.9 1.6E-23 5.5E-28 199.9 13.8 180 298-548 1-185 (186)
20 3tqi_A GMP synthase [glutamine 99.9 2.3E-23 8E-28 229.5 14.5 186 298-546 11-204 (527)
21 1o1y_A Conserved hypothetical 99.9 2.5E-22 8.7E-27 200.0 19.2 185 295-548 10-202 (239)
22 1gpm_A GMP synthetase, XMP ami 99.9 5E-23 1.7E-27 226.8 15.4 184 298-545 8-200 (525)
23 2ywb_A GMP synthase [glutamine 99.9 4.2E-23 1.4E-27 226.4 11.0 180 300-546 2-184 (503)
24 3d54_D Phosphoribosylformylgly 99.9 8.2E-22 2.8E-26 191.3 17.0 186 298-546 3-211 (213)
25 3l7n_A Putative uncharacterize 99.9 3.7E-21 1.3E-25 191.0 18.3 184 298-549 1-197 (236)
26 1gpw_B Amidotransferase HISH; 99.9 3.2E-22 1.1E-26 193.2 10.2 184 298-548 1-199 (201)
27 1q7r_A Predicted amidotransfer 99.8 5.1E-21 1.8E-25 187.8 13.7 186 296-549 22-212 (219)
28 2vxo_A GMP synthase [glutamine 99.8 3.4E-21 1.2E-25 217.9 13.8 180 297-543 29-211 (697)
29 3m3p_A Glutamine amido transfe 99.8 1.4E-20 4.8E-25 188.8 16.3 170 298-530 4-181 (250)
30 2ywd_A Glutamine amidotransfer 99.8 1.5E-20 5.1E-25 179.6 14.8 180 298-546 3-189 (191)
31 2nv0_A Glutamine amidotransfer 99.8 2.8E-20 9.6E-25 178.8 15.8 183 298-548 2-189 (196)
32 1ka9_H Imidazole glycerol phos 99.8 2.7E-20 9.3E-25 179.8 10.4 184 298-546 3-200 (200)
33 2iss_D Glutamine amidotransfer 99.8 7.5E-20 2.6E-24 178.0 13.1 185 295-546 18-207 (208)
34 2abw_A PDX2 protein, glutamina 99.8 1.6E-18 5.4E-23 170.6 15.2 197 297-550 3-217 (227)
35 1jvn_A Glutamine, bifunctional 99.7 1.1E-18 3.6E-23 193.6 4.1 196 298-546 5-215 (555)
36 2h2w_A Homoserine O-succinyltr 99.5 1.4E-13 4.7E-18 141.8 17.1 196 296-531 46-252 (312)
37 2vdj_A Homoserine O-succinyltr 99.5 2.7E-13 9.1E-18 139.2 16.4 196 296-532 34-242 (301)
38 3ugj_A Phosphoribosylformylgly 99.2 1.6E-10 5.5E-15 137.9 14.9 194 296-532 1046-1275(1303)
39 3of5_A Dethiobiotin synthetase 98.7 3E-08 1E-12 97.7 7.7 190 1-243 4-206 (228)
40 3qxc_A Dethiobiotin synthetase 98.6 1.2E-07 4.3E-12 94.2 10.8 162 1-217 21-197 (242)
41 3l4e_A Uncharacterized peptida 98.4 1.9E-07 6.4E-12 90.8 5.8 92 297-405 27-127 (206)
42 3fgn_A Dethiobiotin synthetase 98.4 9.5E-07 3.3E-11 88.3 10.8 165 1-216 26-193 (251)
43 1fy2_A Aspartyl dipeptidase; s 98.4 1.9E-07 6.5E-12 92.0 4.5 88 297-405 31-127 (229)
44 4a0g_A Adenosylmethionine-8-am 98.2 2.5E-06 8.4E-11 98.8 9.5 38 1-39 34-76 (831)
45 1oi4_A Hypothetical protein YH 97.8 7.1E-05 2.4E-09 71.2 9.7 99 297-407 23-134 (193)
46 4dzz_A Plasmid partitioning pr 97.4 0.00044 1.5E-08 64.9 9.6 89 1-153 1-89 (206)
47 3l18_A Intracellular protease 97.4 0.00052 1.8E-08 63.2 8.8 100 297-406 2-110 (168)
48 2g0t_A Conserved hypothetical 97.2 0.00079 2.7E-08 70.2 9.3 38 1-39 169-206 (350)
49 1byi_A Dethiobiotin synthase; 97.0 0.0019 6.6E-08 61.5 9.3 38 1-41 1-38 (224)
50 1hyq_A MIND, cell division inh 97.0 0.003 1E-07 61.8 10.3 41 1-42 2-42 (263)
51 3cio_A ETK, tyrosine-protein k 96.9 0.0016 5.4E-08 66.2 8.1 40 1-41 104-143 (299)
52 3q9l_A Septum site-determining 96.9 0.0039 1.3E-07 60.6 10.3 40 1-41 2-41 (260)
53 2ph1_A Nucleotide-binding prot 96.8 0.0097 3.3E-07 58.6 12.4 42 1-43 18-59 (262)
54 2vrn_A Protease I, DR1199; cys 96.7 0.0049 1.7E-07 57.8 9.2 98 297-406 9-123 (190)
55 1xjc_A MOBB protein homolog; s 96.6 0.0021 7.1E-08 60.3 5.8 44 1-46 4-48 (169)
56 2rk3_A Protein DJ-1; parkinson 96.6 0.0043 1.5E-07 58.7 7.5 99 298-406 4-114 (197)
57 2xj4_A MIPZ; replication, cell 96.5 0.011 3.7E-07 59.1 10.6 40 2-42 5-44 (286)
58 3la6_A Tyrosine-protein kinase 96.5 0.0072 2.5E-07 61.0 9.1 41 1-42 92-132 (286)
59 3bfv_A CAPA1, CAPB2, membrane 96.4 0.012 4.3E-07 58.7 10.4 41 1-42 82-122 (271)
60 2obn_A Hypothetical protein; s 96.4 0.0067 2.3E-07 63.2 8.6 169 1-238 152-331 (349)
61 3dm5_A SRP54, signal recogniti 96.4 0.013 4.3E-07 63.0 10.8 40 2-43 101-140 (443)
62 3kjh_A CO dehydrogenase/acetyl 96.4 0.005 1.7E-07 59.1 6.8 39 1-42 1-39 (254)
63 4hcj_A THIJ/PFPI domain protei 96.3 0.0031 1.1E-07 59.4 4.9 47 360-406 67-116 (177)
64 3ea0_A ATPase, para family; al 96.3 0.0049 1.7E-07 59.3 6.3 41 1-42 4-45 (245)
65 4e08_A DJ-1 beta; flavodoxin-l 96.2 0.0097 3.3E-07 55.9 7.8 99 298-406 6-115 (190)
66 3l3b_A ES1 family protein; ssg 95.9 0.0067 2.3E-07 60.0 5.0 47 361-407 106-167 (242)
67 2xxa_A Signal recognition part 95.7 0.092 3.2E-06 56.1 13.5 40 2-43 101-141 (433)
68 3uk7_A Class I glutamine amido 95.7 0.025 8.7E-07 59.3 8.7 47 361-407 281-330 (396)
69 3cne_A Putative protease I; st 95.6 0.0098 3.3E-07 55.0 4.5 47 361-407 65-120 (175)
70 3ej6_A Catalase-3; heme, hydro 95.5 0.044 1.5E-06 61.5 10.3 96 297-406 537-645 (688)
71 2fex_A Conserved hypothetical 95.4 0.0076 2.6E-07 56.6 3.2 45 362-406 63-109 (188)
72 3end_A Light-independent proto 95.3 0.022 7.4E-07 57.2 6.6 41 1-43 41-81 (307)
73 3kl4_A SRP54, signal recogniti 95.3 0.082 2.8E-06 56.6 11.3 39 2-42 98-136 (433)
74 1vhq_A Enhancing lycopene bios 95.3 0.0086 2.9E-07 58.4 3.4 47 361-407 89-149 (232)
75 3f5d_A Protein YDEA; unknow pr 95.3 0.023 7.8E-07 54.5 6.3 47 361-407 62-109 (206)
76 3uk7_A Class I glutamine amido 95.3 0.034 1.2E-06 58.3 8.1 47 361-407 88-137 (396)
77 3efe_A THIJ/PFPI family protei 95.2 0.022 7.5E-07 54.7 6.0 46 361-406 73-120 (212)
78 3gra_A Transcriptional regulat 95.1 0.027 9.2E-07 53.7 6.0 47 360-407 69-117 (202)
79 3er6_A Putative transcriptiona 95.0 0.02 6.8E-07 54.9 5.0 50 358-407 70-124 (209)
80 3ttv_A Catalase HPII; heme ori 95.0 0.036 1.2E-06 62.7 7.6 100 297-405 600-706 (753)
81 1g3q_A MIND ATPase, cell divis 95.0 0.032 1.1E-06 53.3 6.2 41 1-42 2-42 (237)
82 2ab0_A YAJL; DJ-1/THIJ superfa 94.9 0.0091 3.1E-07 57.0 2.1 101 298-406 3-115 (205)
83 1u9c_A APC35852; structural ge 94.8 0.02 7E-07 55.0 4.4 45 361-405 88-136 (224)
84 3fse_A Two-domain protein cont 94.8 0.06 2.1E-06 56.3 8.2 100 297-406 10-120 (365)
85 3en0_A Cyanophycinase; serine 94.7 0.027 9.2E-07 57.2 5.2 108 282-405 43-159 (291)
86 2ffh_A Protein (FFH); SRP54, s 94.3 0.3 1E-05 52.1 12.4 40 2-43 99-138 (425)
87 3k9g_A PF-32 protein; ssgcid, 94.3 0.042 1.4E-06 53.8 5.3 42 1-44 27-68 (267)
88 3noq_A THIJ/PFPI family protei 94.2 0.04 1.4E-06 53.7 4.9 48 359-406 62-112 (231)
89 2iuf_A Catalase; oxidoreductas 94.0 0.093 3.2E-06 59.1 7.9 96 297-405 529-646 (688)
90 1rw7_A YDR533CP; alpha-beta sa 93.9 0.022 7.6E-07 55.8 2.5 45 361-405 97-145 (243)
91 3n7t_A Macrophage binding prot 93.8 0.029 1E-06 55.5 3.2 45 361-405 104-152 (247)
92 1np6_A Molybdopterin-guanine d 93.8 0.075 2.6E-06 49.6 5.7 44 1-46 6-50 (174)
93 1wcv_1 SOJ, segregation protei 93.7 0.055 1.9E-06 52.9 4.9 43 1-44 6-48 (257)
94 3kkl_A Probable chaperone prot 93.6 0.033 1.1E-06 55.0 3.1 45 361-405 97-145 (244)
95 3fwy_A Light-independent proto 93.6 0.094 3.2E-06 53.6 6.5 43 1-45 48-90 (314)
96 1cp2_A CP2, nitrogenase iron p 93.2 0.099 3.4E-06 51.0 5.7 42 1-44 1-42 (269)
97 2afh_E Nitrogenase iron protei 93.1 0.11 3.8E-06 51.5 6.1 42 1-44 2-43 (289)
98 3mgk_A Intracellular protease/ 93.0 0.037 1.2E-06 53.2 2.3 47 360-406 63-112 (211)
99 3zq6_A Putative arsenical pump 92.6 0.1 3.4E-06 53.3 4.9 41 1-42 13-53 (324)
100 1n57_A Chaperone HSP31, protei 92.4 0.051 1.7E-06 55.0 2.4 46 360-405 143-192 (291)
101 3ewn_A THIJ/PFPI family protei 92.3 0.083 2.8E-06 52.4 3.8 45 362-406 84-132 (253)
102 3ot1_A 4-methyl-5(B-hydroxyeth 92.3 0.04 1.4E-06 52.7 1.4 98 298-405 10-119 (208)
103 1sy7_A Catalase 1; heme oxidat 92.1 0.22 7.6E-06 56.4 7.3 103 297-409 534-646 (715)
104 3ug7_A Arsenical pump-driving 91.3 0.19 6.7E-06 51.8 5.4 41 1-42 25-65 (349)
105 3pg5_A Uncharacterized protein 91.2 0.19 6.4E-06 52.0 5.2 45 1-46 1-45 (361)
106 3cwq_A Para family chromosome 91.1 0.2 6.7E-06 47.5 4.9 39 2-42 1-39 (209)
107 2f1r_A Molybdopterin-guanine d 90.8 0.15 5.1E-06 47.4 3.6 39 1-41 2-40 (171)
108 1zu4_A FTSY; GTPase, signal re 90.4 0.35 1.2E-05 49.5 6.3 39 2-42 106-144 (320)
109 3fkq_A NTRC-like two-domain pr 90.1 0.26 9E-06 51.1 5.1 44 1-45 143-186 (373)
110 2oze_A ORF delta'; para, walke 89.9 0.27 9.3E-06 48.7 4.9 43 2-44 35-78 (298)
111 2woo_A ATPase GET3; tail-ancho 89.8 0.25 8.6E-06 50.4 4.6 40 2-42 19-58 (329)
112 2woj_A ATPase GET3; tail-ancho 89.7 0.21 7.3E-06 51.7 4.0 40 2-42 18-59 (354)
113 1nks_A Adenylate kinase; therm 89.7 0.34 1.2E-05 44.0 5.0 35 1-37 1-35 (194)
114 1ihu_A Arsenical pump-driving 89.3 0.36 1.2E-05 53.2 5.6 39 1-41 8-46 (589)
115 1vma_A Cell division protein F 89.2 0.49 1.7E-05 48.1 6.2 39 2-42 105-143 (306)
116 3io3_A DEHA2D07832P; chaperone 88.1 0.46 1.6E-05 49.2 5.2 40 1-42 18-59 (348)
117 3iqw_A Tail-anchored protein t 88.0 0.44 1.5E-05 49.0 5.0 39 2-42 17-55 (334)
118 2v3c_C SRP54, signal recogniti 87.8 0.27 9.4E-06 52.4 3.3 40 2-43 100-139 (432)
119 2px0_A Flagellar biosynthesis 87.6 0.54 1.9E-05 47.4 5.3 39 2-42 106-145 (296)
120 2z0h_A DTMP kinase, thymidylat 85.8 0.93 3.2E-05 41.4 5.5 33 2-36 1-33 (197)
121 1z0s_A Probable inorganic poly 85.2 0.63 2.1E-05 46.8 4.2 73 297-401 29-101 (278)
122 2j37_W Signal recognition part 85.0 1 3.5E-05 49.0 6.1 40 2-43 102-141 (504)
123 1gtv_A TMK, thymidylate kinase 84.2 0.35 1.2E-05 45.1 1.7 36 2-39 1-36 (214)
124 4gdh_A DJ-1, uncharacterized p 84.1 0.34 1.2E-05 45.7 1.5 45 360-404 71-120 (194)
125 3bhn_A THIJ/PFPI domain protei 83.1 0.3 1E-05 47.8 0.7 46 360-407 78-128 (236)
126 4b4o_A Epimerase family protei 82.8 1.2 4.2E-05 43.7 5.1 33 1-40 1-33 (298)
127 2pbr_A DTMP kinase, thymidylat 82.5 1.2 4.1E-05 40.4 4.6 33 2-36 1-33 (195)
128 3ez9_A Para; DNA binding, wing 82.0 0.97 3.3E-05 47.1 4.2 44 1-45 111-160 (403)
129 3ez2_A Plasmid partition prote 82.0 1.5 5.1E-05 45.5 5.7 43 1-44 108-156 (398)
130 1rz3_A Hypothetical protein rb 81.9 1.8 6.1E-05 40.4 5.7 40 2-43 23-62 (201)
131 1j8m_F SRP54, signal recogniti 81.7 1.7 5.8E-05 43.8 5.8 40 2-43 99-138 (297)
132 1ls1_A Signal recognition part 80.9 2.1 7E-05 43.0 6.1 40 2-43 99-138 (295)
133 2p67_A LAO/AO transport system 80.5 5.1 0.00018 40.7 9.0 39 2-42 57-95 (341)
134 3a4m_A L-seryl-tRNA(SEC) kinas 78.9 1.8 6.3E-05 42.2 4.8 34 1-36 4-37 (260)
135 3pfn_A NAD kinase; structural 78.9 2.3 7.9E-05 44.3 5.7 96 297-401 38-142 (365)
136 1nn5_A Similar to deoxythymidy 78.8 2 6.9E-05 39.7 4.9 34 2-37 10-43 (215)
137 2yvu_A Probable adenylyl-sulfa 77.8 2.7 9.2E-05 38.3 5.3 39 2-42 14-52 (186)
138 3p32_A Probable GTPase RV1496/ 76.8 2.8 9.5E-05 43.0 5.6 41 2-44 80-120 (355)
139 3igf_A ALL4481 protein; two-do 75.8 2.1 7.3E-05 44.6 4.5 38 1-41 2-39 (374)
140 2pez_A Bifunctional 3'-phospho 75.7 3.4 0.00012 37.3 5.3 34 2-37 6-39 (179)
141 1kht_A Adenylate kinase; phosp 74.4 2.9 0.0001 37.6 4.6 31 2-34 4-34 (192)
142 2wwf_A Thymidilate kinase, put 73.4 3.7 0.00013 37.8 5.1 34 2-37 11-44 (212)
143 4edh_A DTMP kinase, thymidylat 73.4 4 0.00014 38.9 5.4 35 2-38 7-41 (213)
144 1u0t_A Inorganic polyphosphate 73.1 3.6 0.00012 41.4 5.3 94 298-400 5-108 (307)
145 3kb2_A SPBC2 prophage-derived 72.6 2.6 9E-05 37.3 3.7 25 1-27 1-25 (173)
146 3e70_C DPA, signal recognition 71.7 5.1 0.00018 40.9 6.1 39 2-42 130-168 (328)
147 1ihu_A Arsenical pump-driving 71.4 4 0.00014 44.7 5.6 42 2-44 327-368 (589)
148 3bos_A Putative DNA replicatio 71.3 6.4 0.00022 36.5 6.3 59 3-63 54-112 (242)
149 3o38_A Short chain dehydrogena 71.3 2.7 9.2E-05 40.6 3.7 33 2-39 23-55 (266)
150 1odf_A YGR205W, hypothetical 3 70.8 3.2 0.00011 41.5 4.3 41 2-44 32-75 (290)
151 1rj9_A FTSY, signal recognitio 69.7 4.5 0.00015 40.8 5.1 38 2-41 103-140 (304)
152 2r8r_A Sensor protein; KDPD, P 68.9 5.7 0.00019 38.7 5.4 39 3-42 7-45 (228)
153 3ek2_A Enoyl-(acyl-carrier-pro 67.3 3.7 0.00013 39.4 3.7 31 2-37 15-46 (271)
154 3guy_A Short-chain dehydrogena 66.3 2.8 9.6E-05 39.6 2.6 33 1-39 1-33 (230)
155 3c8u_A Fructokinase; YP_612366 66.1 8.1 0.00028 35.9 5.8 39 2-42 23-61 (208)
156 1e6c_A Shikimate kinase; phosp 64.9 4.1 0.00014 36.2 3.3 25 1-27 2-26 (173)
157 1a7j_A Phosphoribulokinase; tr 64.7 3.9 0.00013 40.8 3.4 41 2-44 6-46 (290)
158 3lv8_A DTMP kinase, thymidylat 64.5 6.9 0.00024 38.0 5.0 35 2-38 28-63 (236)
159 2yhs_A FTSY, cell division pro 64.4 7.8 0.00027 42.1 5.8 37 2-40 294-330 (503)
160 1fjh_A 3alpha-hydroxysteroid d 64.2 4.6 0.00016 38.5 3.7 33 1-39 1-33 (257)
161 1m7g_A Adenylylsulfate kinase; 64.1 5.3 0.00018 37.2 4.0 36 2-39 26-62 (211)
162 2plr_A DTMP kinase, probable t 63.7 7.1 0.00024 35.7 4.8 30 2-34 5-34 (213)
163 3h2s_A Putative NADH-flavin re 63.3 7 0.00024 36.1 4.7 33 1-40 1-33 (224)
164 1zmt_A Haloalcohol dehalogenas 63.1 5.3 0.00018 38.3 3.9 31 1-37 1-31 (254)
165 4tmk_A Protein (thymidylate ki 62.9 7.8 0.00027 36.9 5.0 33 2-36 4-37 (213)
166 3ew7_A LMO0794 protein; Q8Y8U8 62.9 8.2 0.00028 35.4 5.1 33 1-40 1-33 (221)
167 3nrc_A Enoyl-[acyl-carrier-pro 62.6 5.9 0.0002 38.7 4.2 33 2-39 27-60 (280)
168 2wsm_A Hydrogenase expression/ 61.5 6.2 0.00021 36.5 4.0 43 2-47 31-73 (221)
169 3oig_A Enoyl-[acyl-carrier-pro 61.3 5.9 0.0002 38.1 3.9 31 2-37 8-39 (266)
170 2an1_A Putative kinase; struct 60.6 8.5 0.00029 38.1 5.0 90 298-401 6-97 (292)
171 2v54_A DTMP kinase, thymidylat 60.4 5.1 0.00017 36.6 3.1 31 2-36 5-35 (204)
172 3ld9_A DTMP kinase, thymidylat 60.1 8.7 0.0003 37.0 4.8 33 2-36 22-55 (223)
173 2if2_A Dephospho-COA kinase; a 60.0 5.7 0.00019 36.5 3.4 23 1-25 1-23 (204)
174 2ptg_A Enoyl-acyl carrier redu 59.2 6.5 0.00022 39.1 3.9 32 2-38 10-42 (319)
175 1d7o_A Enoyl-[acyl-carrier pro 58.8 6.9 0.00024 38.4 4.0 32 2-38 9-41 (297)
176 1yrb_A ATP(GTP)binding protein 58.5 9.7 0.00033 36.3 4.9 33 11-44 22-54 (262)
177 3b9q_A Chloroplast SRP recepto 58.1 13 0.00044 37.3 5.9 37 2-40 101-137 (302)
178 1eiw_A Hypothetical protein MT 57.8 6.7 0.00023 33.8 3.2 39 359-397 35-73 (111)
179 3nrs_A Dihydrofolate:folylpoly 57.5 12 0.0004 39.5 5.7 34 2-39 53-86 (437)
180 3uie_A Adenylyl-sulfate kinase 57.2 11 0.00037 34.8 4.8 31 2-34 26-56 (200)
181 3v9p_A DTMP kinase, thymidylat 57.1 8.4 0.00029 37.1 4.1 36 2-39 26-65 (227)
182 2p91_A Enoyl-[acyl-carrier-pro 57.0 8.1 0.00028 37.7 4.1 33 2-39 22-55 (285)
183 2i2c_A Probable inorganic poly 57.0 4.5 0.00015 40.0 2.2 35 362-401 35-71 (272)
184 4fs3_A Enoyl-[acyl-carrier-pro 56.9 7.5 0.00026 37.6 3.8 31 2-37 7-38 (256)
185 2o2s_A Enoyl-acyl carrier redu 56.8 7 0.00024 38.9 3.6 32 2-38 10-42 (315)
186 3l77_A Short-chain alcohol deh 56.5 6.8 0.00023 36.8 3.4 32 1-38 2-33 (235)
187 3pzx_A Formate--tetrahydrofola 56.4 12 0.00039 40.7 5.3 46 2-48 58-110 (557)
188 3trf_A Shikimate kinase, SK; a 56.3 8.6 0.00029 34.6 3.9 24 2-27 6-29 (185)
189 1w78_A FOLC bifunctional prote 56.3 12 0.0004 39.1 5.4 34 2-39 50-83 (422)
190 2pd4_A Enoyl-[acyl-carrier-pro 56.1 8.4 0.00029 37.4 4.0 33 2-39 7-40 (275)
191 2og2_A Putative signal recogni 55.8 14 0.00049 38.1 5.9 37 2-40 158-194 (359)
192 1uj2_A Uridine-cytidine kinase 55.7 10 0.00035 36.4 4.5 25 2-28 23-47 (252)
193 3ged_A Short-chain dehydrogena 55.4 6.8 0.00023 38.3 3.2 32 2-39 3-34 (247)
194 3grk_A Enoyl-(acyl-carrier-pro 55.2 8.6 0.00029 37.9 4.0 31 2-37 32-63 (293)
195 2h7i_A Enoyl-[acyl-carrier-pro 55.2 9.4 0.00032 36.9 4.2 32 2-38 8-40 (269)
196 3asz_A Uridine kinase; cytidin 55.0 13 0.00043 34.3 4.9 36 2-42 7-42 (211)
197 4eaq_A DTMP kinase, thymidylat 54.7 9.4 0.00032 36.5 4.0 32 2-36 27-58 (229)
198 3r7f_A Aspartate carbamoyltran 54.7 69 0.0024 32.3 10.6 138 190-370 74-211 (304)
199 3gdg_A Probable NADP-dependent 54.6 7.4 0.00025 37.4 3.3 31 2-37 21-52 (267)
200 2grj_A Dephospho-COA kinase; T 54.4 12 0.00042 34.8 4.7 28 3-35 14-41 (192)
201 3tqc_A Pantothenate kinase; bi 54.2 14 0.00047 37.6 5.4 38 3-42 94-133 (321)
202 3exa_A TRNA delta(2)-isopenten 54.2 41 0.0014 34.3 8.8 44 2-52 4-50 (322)
203 1jbw_A Folylpolyglutamate synt 53.9 12 0.00042 39.1 5.1 33 2-38 40-72 (428)
204 1qsg_A Enoyl-[acyl-carrier-pro 53.8 10 0.00036 36.4 4.2 33 2-39 10-43 (265)
205 3i4f_A 3-oxoacyl-[acyl-carrier 53.5 7 0.00024 37.5 2.9 31 1-37 7-37 (264)
206 3ksm_A ABC-type sugar transpor 53.3 39 0.0013 31.6 8.2 33 361-397 57-90 (276)
207 3l6e_A Oxidoreductase, short-c 53.3 8.2 0.00028 36.7 3.3 33 1-39 3-35 (235)
208 2wyu_A Enoyl-[acyl carrier pro 53.0 9.3 0.00032 36.7 3.7 32 2-38 9-41 (261)
209 3t61_A Gluconokinase; PSI-biol 52.9 9.3 0.00032 35.0 3.6 24 2-27 19-42 (202)
210 3d6n_B Aspartate carbamoyltran 52.9 40 0.0014 33.8 8.4 134 192-368 74-211 (291)
211 3k31_A Enoyl-(acyl-carrier-pro 52.8 9.8 0.00033 37.5 3.9 31 2-37 31-62 (296)
212 1zmo_A Halohydrin dehalogenase 52.7 9.8 0.00033 36.2 3.8 31 1-37 1-31 (244)
213 2dkn_A 3-alpha-hydroxysteroid 52.5 9.4 0.00032 35.8 3.6 33 1-39 1-33 (255)
214 3rht_A (gatase1)-like protein; 52.1 45 0.0015 32.8 8.5 81 298-397 5-85 (259)
215 4ag6_A VIRB4 ATPase, type IV s 51.8 15 0.0005 37.8 5.2 35 3-41 37-71 (392)
216 3eph_A TRNA isopentenyltransfe 50.7 74 0.0025 33.4 10.4 44 2-52 3-49 (409)
217 3dqp_A Oxidoreductase YLBE; al 50.4 13 0.00045 34.3 4.2 34 1-41 1-34 (219)
218 1o5z_A Folylpolyglutamate synt 50.3 14 0.00047 39.0 4.8 33 2-38 53-85 (442)
219 3orf_A Dihydropteridine reduct 50.3 11 0.00037 36.1 3.7 32 2-39 23-54 (251)
220 2ze6_A Isopentenyl transferase 50.3 24 0.0008 34.1 6.2 25 1-27 1-25 (253)
221 3lw7_A Adenylate kinase relate 50.0 14 0.00046 32.2 4.1 29 2-36 2-30 (179)
222 2ph3_A 3-oxoacyl-[acyl carrier 50.0 7.8 0.00027 36.4 2.6 31 1-37 1-31 (245)
223 1sby_A Alcohol dehydrogenase; 49.9 10 0.00035 36.1 3.4 31 2-38 6-37 (254)
224 4e3z_A Putative oxidoreductase 49.9 8.5 0.00029 37.2 2.9 29 2-36 27-55 (272)
225 3tsc_A Putative oxidoreductase 49.5 9.4 0.00032 37.0 3.1 32 2-39 12-43 (277)
226 4b79_A PA4098, probable short- 49.4 11 0.00037 36.8 3.5 32 2-39 12-43 (242)
227 3l49_A ABC sugar (ribose) tran 48.9 68 0.0023 30.3 9.3 33 361-397 60-92 (291)
228 3lt0_A Enoyl-ACP reductase; tr 48.8 11 0.00037 37.9 3.5 32 2-38 3-35 (329)
229 4fn4_A Short chain dehydrogena 48.7 9.9 0.00034 37.3 3.2 32 2-39 8-39 (254)
230 3h7a_A Short chain dehydrogena 48.7 11 0.00038 36.1 3.5 32 2-39 8-39 (252)
231 1t0b_A THUA-like protein; treh 48.6 54 0.0018 31.9 8.5 88 297-400 7-106 (252)
232 1qf9_A UMP/CMP kinase, protein 48.4 14 0.00046 33.1 3.9 25 1-27 6-30 (194)
233 2ew8_A (S)-1-phenylethanol deh 48.4 12 0.0004 35.8 3.6 32 2-39 8-39 (249)
234 3dhn_A NAD-dependent epimerase 48.3 18 0.00062 33.3 4.8 33 1-39 4-36 (227)
235 2dtx_A Glucose 1-dehydrogenase 48.3 12 0.0004 36.2 3.6 32 2-39 9-40 (264)
236 1x6v_B Bifunctional 3'-phospho 48.2 16 0.00055 40.7 5.1 34 2-37 53-86 (630)
237 2ef0_A Ornithine carbamoyltran 48.1 47 0.0016 33.5 8.1 134 192-370 85-221 (301)
238 3o26_A Salutaridine reductase; 48.1 9.5 0.00033 37.1 2.9 30 2-37 13-42 (311)
239 3p19_A BFPVVD8, putative blue 48.0 9.9 0.00034 36.9 3.0 31 2-38 17-47 (266)
240 3asu_A Short-chain dehydrogena 48.0 13 0.00046 35.4 3.9 30 2-37 1-30 (248)
241 3pxx_A Carveol dehydrogenase; 47.7 10 0.00035 36.6 3.1 32 2-39 11-42 (287)
242 3ezl_A Acetoacetyl-COA reducta 47.7 9.2 0.00032 36.4 2.7 29 2-36 14-42 (256)
243 3vtz_A Glucose 1-dehydrogenase 47.6 11 0.00038 36.6 3.3 32 2-39 15-46 (269)
244 4fgs_A Probable dehydrogenase 47.6 11 0.00036 37.5 3.2 30 2-37 30-59 (273)
245 4h15_A Short chain alcohol deh 47.5 9.8 0.00033 37.3 2.9 31 2-38 12-42 (261)
246 2kjq_A DNAA-related protein; s 47.4 21 0.00071 31.6 4.9 35 3-39 38-72 (149)
247 3ko8_A NAD-dependent epimerase 47.4 18 0.00062 35.1 4.9 30 4-39 3-32 (312)
248 2gk3_A Putative cytoplasmic pr 47.3 21 0.00072 34.8 5.3 70 314-397 43-124 (256)
249 2w58_A DNAI, primosome compone 47.1 21 0.00073 32.4 5.1 36 2-39 55-90 (202)
250 3rwb_A TPLDH, pyridoxal 4-dehy 47.1 10 0.00035 36.2 3.0 30 2-37 7-36 (247)
251 2rhm_A Putative kinase; P-loop 47.0 17 0.00058 32.6 4.3 24 2-27 6-29 (193)
252 3llv_A Exopolyphosphatase-rela 46.9 14 0.00048 31.7 3.6 32 2-40 7-38 (141)
253 3f9i_A 3-oxoacyl-[acyl-carrier 46.8 9.8 0.00034 36.0 2.7 30 2-37 15-44 (249)
254 3vaa_A Shikimate kinase, SK; s 46.7 15 0.0005 33.8 3.8 25 1-27 25-49 (199)
255 4fyk_A Deoxyribonucleoside 5'- 46.7 43 0.0015 30.3 6.9 94 298-399 3-102 (152)
256 3gbv_A Putative LACI-family tr 46.7 54 0.0019 31.1 8.2 34 361-398 68-101 (304)
257 3tpc_A Short chain alcohol deh 46.6 13 0.00044 35.5 3.6 32 2-39 8-39 (257)
258 2qgz_A Helicase loader, putati 46.3 22 0.00074 35.6 5.3 36 2-39 153-189 (308)
259 3gd5_A Otcase, ornithine carba 46.2 52 0.0018 33.5 8.2 105 193-342 89-193 (323)
260 1uf9_A TT1252 protein; P-loop, 46.1 14 0.00048 33.5 3.6 27 2-34 9-35 (203)
261 3l6u_A ABC-type sugar transpor 46.1 81 0.0028 29.8 9.3 34 361-398 63-96 (293)
262 2gks_A Bifunctional SAT/APS ki 46.0 20 0.00067 39.2 5.3 37 2-40 373-409 (546)
263 3edm_A Short chain dehydrogena 45.8 12 0.0004 36.1 3.1 30 2-37 9-38 (259)
264 3i1j_A Oxidoreductase, short c 45.7 11 0.00038 35.5 2.9 32 2-39 15-46 (247)
265 3uve_A Carveol dehydrogenase ( 45.6 12 0.0004 36.5 3.1 32 2-39 12-43 (286)
266 8abp_A L-arabinose-binding pro 45.6 79 0.0027 30.1 9.2 33 361-397 56-88 (306)
267 1m8p_A Sulfate adenylyltransfe 45.6 18 0.00062 39.7 5.0 36 2-39 397-433 (573)
268 1y63_A LMAJ004144AAA protein; 45.4 14 0.00048 33.5 3.5 23 2-26 11-33 (184)
269 3ppi_A 3-hydroxyacyl-COA dehyd 45.4 13 0.00045 35.9 3.5 31 2-38 31-61 (281)
270 3lf2_A Short chain oxidoreduct 45.4 12 0.00041 36.0 3.2 31 2-38 9-39 (265)
271 3sx2_A Putative 3-ketoacyl-(ac 45.4 12 0.00041 36.2 3.1 32 2-39 14-45 (278)
272 3s55_A Putative short-chain de 45.4 12 0.00041 36.3 3.1 32 2-39 11-42 (281)
273 1ooe_A Dihydropteridine reduct 45.2 14 0.00049 34.7 3.6 32 2-39 4-35 (236)
274 3ucx_A Short chain dehydrogena 45.2 15 0.00052 35.3 3.9 30 2-37 12-41 (264)
275 3dii_A Short-chain dehydrogena 45.1 12 0.00042 35.6 3.2 31 2-38 3-33 (247)
276 3cm0_A Adenylate kinase; ATP-b 45.1 21 0.00073 31.8 4.6 24 2-27 5-28 (186)
277 1orr_A CDP-tyvelose-2-epimeras 44.8 18 0.00061 35.6 4.4 31 1-37 1-31 (347)
278 3tox_A Short chain dehydrogena 44.7 10 0.00036 37.1 2.6 30 2-37 9-38 (280)
279 2jah_A Clavulanic acid dehydro 44.7 13 0.00044 35.4 3.2 31 2-38 8-38 (247)
280 3f1l_A Uncharacterized oxidore 44.7 13 0.00043 35.6 3.2 31 2-38 13-43 (252)
281 3tfo_A Putative 3-oxoacyl-(acy 44.6 12 0.0004 36.5 2.9 32 2-39 5-36 (264)
282 3gvc_A Oxidoreductase, probabl 44.5 14 0.00048 36.1 3.5 31 2-38 30-60 (277)
283 2d1y_A Hypothetical protein TT 44.4 14 0.00049 35.2 3.5 32 2-39 7-38 (256)
284 1ukz_A Uridylate kinase; trans 44.4 15 0.00051 33.5 3.5 24 1-26 15-38 (203)
285 1e7w_A Pteridine reductase; di 44.3 11 0.00038 36.9 2.8 31 2-38 10-40 (291)
286 3v2h_A D-beta-hydroxybutyrate 44.2 13 0.00045 36.3 3.3 29 2-36 26-54 (281)
287 1kag_A SKI, shikimate kinase I 44.1 12 0.00042 33.0 2.8 24 2-27 5-28 (173)
288 4imr_A 3-oxoacyl-(acyl-carrier 44.1 13 0.00045 36.2 3.2 30 2-37 34-63 (275)
289 3t7c_A Carveol dehydrogenase; 44.1 13 0.00043 36.7 3.1 32 2-39 29-60 (299)
290 3tzq_B Short-chain type dehydr 44.0 14 0.0005 35.7 3.5 32 2-39 12-43 (271)
291 3zv4_A CIS-2,3-dihydrobiphenyl 44.0 13 0.00045 36.3 3.2 30 2-37 6-35 (281)
292 3bbl_A Regulatory protein of L 43.9 1.2E+02 0.0043 28.6 10.3 32 361-398 63-94 (287)
293 2rgy_A Transcriptional regulat 43.8 1.4E+02 0.0049 28.2 10.7 32 361-398 66-97 (290)
294 4dmm_A 3-oxoacyl-[acyl-carrier 43.7 12 0.0004 36.4 2.8 30 2-37 29-58 (269)
295 1qhx_A CPT, protein (chloramph 43.7 14 0.00048 32.8 3.1 36 2-42 4-39 (178)
296 2fwm_X 2,3-dihydro-2,3-dihydro 43.6 15 0.00052 34.9 3.6 32 2-39 8-39 (250)
297 1u7z_A Coenzyme A biosynthesis 43.6 13 0.00044 36.0 3.0 32 2-38 9-55 (226)
298 1uls_A Putative 3-oxoacyl-acyl 43.5 14 0.00046 35.2 3.2 32 2-39 6-37 (245)
299 2nwq_A Probable short-chain de 43.5 18 0.0006 35.3 4.0 32 2-39 22-53 (272)
300 3op4_A 3-oxoacyl-[acyl-carrier 43.4 13 0.00044 35.5 3.0 31 2-38 10-40 (248)
301 1dhr_A Dihydropteridine reduct 43.3 15 0.00051 34.7 3.4 32 2-39 8-39 (241)
302 3tl3_A Short-chain type dehydr 43.2 11 0.00038 36.0 2.5 30 2-37 10-39 (257)
303 3qiv_A Short-chain dehydrogena 43.2 14 0.00047 35.1 3.2 30 2-37 10-39 (253)
304 3hjn_A DTMP kinase, thymidylat 43.1 31 0.0011 32.0 5.5 35 3-39 2-36 (197)
305 4f2g_A Otcase 1, ornithine car 43.1 57 0.0019 33.0 7.8 131 193-368 86-222 (309)
306 3ijr_A Oxidoreductase, short c 43.0 15 0.00053 36.0 3.6 32 2-39 48-79 (291)
307 1knq_A Gluconate kinase; ALFA/ 43.0 25 0.00087 31.1 4.8 24 2-27 9-32 (175)
308 4da9_A Short-chain dehydrogena 43.0 14 0.00046 36.2 3.1 30 2-37 30-59 (280)
309 3nyw_A Putative oxidoreductase 42.9 12 0.0004 35.9 2.6 32 2-39 8-39 (250)
310 2ekp_A 2-deoxy-D-gluconate 3-d 42.9 16 0.00056 34.4 3.6 32 2-39 3-34 (239)
311 1iy8_A Levodione reductase; ox 42.8 14 0.00048 35.5 3.2 31 2-38 14-44 (267)
312 4dry_A 3-oxoacyl-[acyl-carrier 42.6 12 0.00042 36.5 2.8 31 2-38 34-64 (281)
313 2p5y_A UDP-glucose 4-epimerase 42.6 20 0.00069 34.9 4.4 30 1-37 1-30 (311)
314 3qvo_A NMRA family protein; st 42.6 19 0.00066 33.7 4.1 34 1-40 23-57 (236)
315 3ftp_A 3-oxoacyl-[acyl-carrier 42.5 12 0.00043 36.3 2.8 30 2-37 29-58 (270)
316 3v2g_A 3-oxoacyl-[acyl-carrier 42.5 14 0.00048 35.9 3.1 30 2-37 32-61 (271)
317 2hf9_A Probable hydrogenase ni 42.4 17 0.00059 33.5 3.7 41 3-46 40-80 (226)
318 2vos_A Folylpolyglutamate synt 42.4 23 0.00079 37.9 5.1 32 2-37 65-96 (487)
319 1zuh_A Shikimate kinase; alpha 42.2 19 0.00064 31.8 3.7 25 1-27 7-31 (168)
320 3tjr_A Short chain dehydrogena 42.2 14 0.00048 36.5 3.2 30 2-37 32-61 (301)
321 4iiu_A 3-oxoacyl-[acyl-carrier 42.2 13 0.00044 35.8 2.8 29 2-36 27-55 (267)
322 4eso_A Putative oxidoreductase 42.2 15 0.0005 35.3 3.2 32 2-39 9-40 (255)
323 1o5i_A 3-oxoacyl-(acyl carrier 42.1 15 0.00052 35.0 3.3 33 2-40 20-52 (249)
324 3lyl_A 3-oxoacyl-(acyl-carrier 42.0 14 0.00048 34.9 3.0 31 2-38 6-36 (247)
325 3qk7_A Transcriptional regulat 42.0 73 0.0025 30.5 8.3 32 361-398 64-95 (294)
326 3osu_A 3-oxoacyl-[acyl-carrier 42.0 13 0.00046 35.2 2.9 29 2-36 5-33 (246)
327 3ksu_A 3-oxoacyl-acyl carrier 42.0 11 0.00038 36.3 2.3 30 2-37 12-41 (262)
328 3icc_A Putative 3-oxoacyl-(acy 41.9 13 0.00045 35.1 2.8 30 2-37 8-37 (255)
329 3k4h_A Putative transcriptiona 41.9 1.1E+02 0.0037 28.8 9.5 31 361-397 68-98 (292)
330 3ec2_A DNA replication protein 41.8 26 0.0009 31.3 4.7 33 2-36 39-72 (180)
331 2ae2_A Protein (tropinone redu 41.8 15 0.00051 35.1 3.2 32 2-39 10-41 (260)
332 3gk3_A Acetoacetyl-COA reducta 41.8 12 0.00042 36.0 2.6 30 2-37 26-55 (269)
333 3e03_A Short chain dehydrogena 41.8 17 0.00057 35.3 3.5 32 2-39 7-38 (274)
334 4dqx_A Probable oxidoreductase 41.8 15 0.0005 35.9 3.2 31 2-38 28-58 (277)
335 3oid_A Enoyl-[acyl-carrier-pro 41.7 14 0.00047 35.6 2.9 29 2-36 5-33 (258)
336 3sju_A Keto reductase; short-c 41.7 15 0.00051 35.8 3.2 31 2-38 25-55 (279)
337 3aez_A Pantothenate kinase; tr 41.7 33 0.0011 34.4 5.8 39 3-43 92-132 (312)
338 1vl8_A Gluconate 5-dehydrogena 41.6 15 0.00051 35.5 3.2 31 2-38 22-52 (267)
339 3rkr_A Short chain oxidoreduct 41.6 14 0.00047 35.5 2.9 30 2-37 30-59 (262)
340 2rh8_A Anthocyanidin reductase 41.5 26 0.00088 34.5 5.0 32 2-39 10-41 (338)
341 3d3q_A TRNA delta(2)-isopenten 41.4 32 0.0011 35.3 5.7 44 2-52 8-54 (340)
342 2wsb_A Galactitol dehydrogenas 41.4 15 0.00053 34.5 3.2 30 2-37 12-41 (254)
343 3is3_A 17BETA-hydroxysteroid d 41.4 14 0.00047 35.8 2.9 30 2-37 19-48 (270)
344 2vli_A Antibiotic resistance p 41.4 12 0.00039 33.5 2.2 25 1-27 5-29 (183)
345 2uvd_A 3-oxoacyl-(acyl-carrier 41.3 14 0.00047 35.1 2.8 30 2-37 5-34 (246)
346 3uug_A Multiple sugar-binding 41.2 1E+02 0.0035 29.7 9.4 33 361-397 58-90 (330)
347 3u5t_A 3-oxoacyl-[acyl-carrier 41.2 13 0.00044 36.1 2.6 29 2-36 28-56 (267)
348 3rot_A ABC sugar transporter, 41.2 1.1E+02 0.0036 29.2 9.4 33 361-397 60-92 (297)
349 3ioy_A Short-chain dehydrogena 41.2 19 0.00064 35.9 3.9 32 2-39 9-40 (319)
350 4ffl_A PYLC; amino acid, biosy 41.0 42 0.0014 33.7 6.6 35 1-44 1-35 (363)
351 3uf0_A Short-chain dehydrogena 41.0 15 0.00052 35.7 3.1 30 2-37 32-61 (273)
352 2qt1_A Nicotinamide riboside k 41.0 15 0.0005 33.8 2.9 37 2-44 22-58 (207)
353 3pk0_A Short-chain dehydrogena 41.0 14 0.00047 35.6 2.8 32 2-39 11-42 (262)
354 3sc4_A Short chain dehydrogena 41.0 16 0.00054 35.7 3.3 32 2-39 10-41 (285)
355 2ag5_A DHRS6, dehydrogenase/re 40.9 15 0.0005 34.9 2.9 32 2-39 7-38 (246)
356 3iij_A Coilin-interacting nucl 40.9 17 0.00059 32.5 3.3 24 2-27 12-35 (180)
357 2nm0_A Probable 3-oxacyl-(acyl 40.9 19 0.00064 34.6 3.7 32 2-39 22-53 (253)
358 1jjv_A Dephospho-COA kinase; P 40.8 21 0.00072 32.6 3.9 28 1-34 2-29 (206)
359 3pgx_A Carveol dehydrogenase; 40.7 16 0.00054 35.4 3.2 32 2-39 16-47 (280)
360 3jy6_A Transcriptional regulat 40.7 82 0.0028 29.6 8.4 31 361-398 62-92 (276)
361 3un1_A Probable oxidoreductase 40.7 17 0.00058 35.0 3.4 32 2-39 29-60 (260)
362 4e6p_A Probable sorbitol dehyd 40.7 16 0.00054 35.0 3.2 31 2-38 9-39 (259)
363 4fc7_A Peroxisomal 2,4-dienoyl 40.7 14 0.00048 35.9 2.8 30 2-37 28-57 (277)
364 1mxh_A Pteridine reductase 2; 40.7 14 0.00048 35.6 2.8 30 2-37 12-41 (276)
365 4hp8_A 2-deoxy-D-gluconate 3-d 40.6 13 0.00045 36.4 2.6 30 2-37 10-39 (247)
366 3r6d_A NAD-dependent epimerase 40.5 26 0.00088 32.3 4.5 33 1-39 5-38 (221)
367 4iin_A 3-ketoacyl-acyl carrier 40.5 14 0.00048 35.6 2.8 30 2-37 30-59 (271)
368 3m1a_A Putative dehydrogenase; 40.5 16 0.00056 35.2 3.3 32 1-38 5-36 (281)
369 2f6r_A COA synthase, bifunctio 40.4 22 0.00076 34.9 4.2 34 1-42 75-108 (281)
370 4g81_D Putative hexonate dehyd 40.4 12 0.00042 36.6 2.3 30 2-37 10-39 (255)
371 2qq5_A DHRS1, dehydrogenase/re 40.4 15 0.00051 35.2 2.9 31 2-38 6-36 (260)
372 2hq1_A Glucose/ribitol dehydro 40.3 16 0.00055 34.2 3.1 30 2-37 6-35 (247)
373 2rhc_B Actinorhodin polyketide 40.3 16 0.00055 35.4 3.2 32 2-39 23-54 (277)
374 1via_A Shikimate kinase; struc 40.3 17 0.00058 32.4 3.1 25 1-27 4-28 (175)
375 1p3d_A UDP-N-acetylmuramate--a 40.0 26 0.00089 37.1 5.0 57 2-64 119-175 (475)
376 4gkb_A 3-oxoacyl-[acyl-carrier 39.9 19 0.00064 35.3 3.6 31 2-38 8-38 (258)
377 1edo_A Beta-keto acyl carrier 39.9 15 0.00051 34.4 2.8 29 2-36 2-30 (244)
378 1tev_A UMP-CMP kinase; ploop, 39.8 25 0.00085 31.3 4.2 24 2-27 4-27 (196)
379 1geg_A Acetoin reductase; SDR 39.8 17 0.00057 34.7 3.2 31 2-38 3-33 (256)
380 2c95_A Adenylate kinase 1; tra 39.8 19 0.00065 32.3 3.4 24 2-27 10-33 (196)
381 3oec_A Carveol dehydrogenase ( 39.8 15 0.00051 36.6 2.9 32 2-39 47-78 (317)
382 2gdz_A NAD+-dependent 15-hydro 39.7 17 0.00057 34.9 3.2 31 2-38 8-38 (267)
383 1h5q_A NADP-dependent mannitol 39.7 17 0.00057 34.5 3.1 30 2-37 15-44 (265)
384 3ai3_A NADPH-sorbose reductase 39.6 17 0.0006 34.7 3.3 31 2-38 8-38 (263)
385 1j6u_A UDP-N-acetylmuramate-al 39.6 26 0.00088 37.2 4.9 37 2-43 115-151 (469)
386 3a28_C L-2.3-butanediol dehydr 39.6 15 0.00051 35.1 2.8 30 2-37 3-32 (258)
387 1nff_A Putative oxidoreductase 39.6 17 0.00059 34.9 3.2 31 2-38 8-38 (260)
388 3imf_A Short chain dehydrogena 39.5 15 0.00052 35.1 2.8 31 2-38 7-37 (257)
389 2pd6_A Estradiol 17-beta-dehyd 39.4 17 0.00059 34.4 3.2 31 2-38 8-38 (264)
390 3gem_A Short chain dehydrogena 39.4 14 0.00048 35.6 2.6 32 2-39 28-59 (260)
391 1zem_A Xylitol dehydrogenase; 39.4 17 0.00058 34.9 3.2 31 2-38 8-38 (262)
392 3tlx_A Adenylate kinase 2; str 39.4 24 0.00081 33.7 4.2 24 2-27 30-53 (243)
393 3r3s_A Oxidoreductase; structu 39.3 17 0.00057 35.8 3.1 30 2-37 50-79 (294)
394 4ibo_A Gluconate dehydrogenase 39.3 13 0.00045 36.1 2.4 30 2-37 27-56 (271)
395 2oyn_A Hypothetical protein MJ 39.3 7.3 0.00025 35.3 0.4 34 2-35 5-42 (146)
396 2jaq_A Deoxyguanosine kinase; 39.3 22 0.00074 32.1 3.7 23 3-27 2-24 (205)
397 4hlc_A DTMP kinase, thymidylat 39.2 33 0.0011 32.1 5.1 36 1-39 2-37 (205)
398 2c20_A UDP-glucose 4-epimerase 39.2 25 0.00085 34.4 4.4 32 1-38 1-32 (330)
399 3v8b_A Putative dehydrogenase, 39.2 17 0.00059 35.5 3.2 31 2-38 29-59 (283)
400 3qlj_A Short chain dehydrogena 39.1 15 0.00051 36.6 2.7 31 2-38 28-58 (322)
401 2zat_A Dehydrogenase/reductase 39.1 17 0.00056 34.8 3.0 31 2-38 15-45 (260)
402 1uzm_A 3-oxoacyl-[acyl-carrier 39.1 18 0.0006 34.5 3.2 32 2-39 16-47 (247)
403 3awd_A GOX2181, putative polyo 39.1 18 0.00061 34.2 3.2 31 2-38 14-44 (260)
404 3uce_A Dehydrogenase; rossmann 39.0 12 0.0004 35.0 1.9 32 2-39 7-38 (223)
405 3n74_A 3-ketoacyl-(acyl-carrie 39.0 18 0.00061 34.4 3.2 32 2-39 10-41 (261)
406 1xg5_A ARPG836; short chain de 39.0 17 0.00059 35.0 3.2 32 2-39 33-64 (279)
407 3rih_A Short chain dehydrogena 38.9 17 0.00058 35.9 3.1 32 2-39 42-73 (293)
408 3rft_A Uronate dehydrogenase; 38.9 15 0.00052 35.2 2.7 35 1-41 3-37 (267)
409 1uay_A Type II 3-hydroxyacyl-C 38.8 18 0.00062 33.6 3.2 32 2-39 3-34 (242)
410 2fep_A Catabolite control prot 38.8 1.5E+02 0.0051 28.1 10.0 32 361-398 71-102 (289)
411 3u9l_A 3-oxoacyl-[acyl-carrier 38.8 14 0.00048 37.1 2.5 30 2-37 6-35 (324)
412 2pk3_A GDP-6-deoxy-D-LYXO-4-he 38.8 29 0.00099 33.7 4.8 32 2-39 13-44 (321)
413 1x1t_A D(-)-3-hydroxybutyrate 38.7 17 0.00059 34.7 3.1 30 2-37 5-34 (260)
414 3g1w_A Sugar ABC transporter; 38.7 80 0.0027 30.1 8.0 33 361-397 60-92 (305)
415 3r1i_A Short-chain type dehydr 38.7 20 0.00067 35.0 3.5 30 2-37 33-62 (276)
416 4e5v_A Putative THUA-like prot 38.6 1.3E+02 0.0043 29.8 9.5 89 296-401 3-96 (281)
417 3t4x_A Oxidoreductase, short c 38.4 16 0.00055 35.2 2.8 32 2-39 11-42 (267)
418 3d3w_A L-xylulose reductase; u 38.1 19 0.00065 33.7 3.2 32 2-39 8-39 (244)
419 4dyv_A Short-chain dehydrogena 38.1 16 0.00055 35.6 2.8 32 2-39 29-60 (272)
420 2c29_D Dihydroflavonol 4-reduc 38.1 26 0.0009 34.4 4.4 32 2-39 6-37 (337)
421 3afn_B Carbonyl reductase; alp 38.1 17 0.00057 34.2 2.8 31 2-38 8-38 (258)
422 3svt_A Short-chain type dehydr 38.1 18 0.00063 35.0 3.2 32 2-39 12-43 (281)
423 4egf_A L-xylulose reductase; s 38.1 16 0.00055 35.2 2.8 32 2-39 21-52 (266)
424 1hdc_A 3-alpha, 20 beta-hydrox 38.1 18 0.00062 34.5 3.1 31 2-38 6-36 (254)
425 1yb1_A 17-beta-hydroxysteroid 38.0 18 0.00063 34.8 3.2 32 2-39 32-63 (272)
426 3ak4_A NADH-dependent quinucli 37.9 19 0.00065 34.4 3.2 31 2-38 13-43 (263)
427 3ff4_A Uncharacterized protein 37.9 34 0.0012 29.6 4.6 37 362-404 82-118 (122)
428 2f00_A UDP-N-acetylmuramate--L 37.7 30 0.001 36.9 5.0 57 2-64 120-176 (491)
429 3afo_A NADH kinase POS5; alpha 37.6 12 0.0004 39.2 1.8 36 361-401 113-149 (388)
430 1yde_A Retinal dehydrogenase/r 37.6 19 0.00065 34.8 3.2 31 2-38 10-40 (270)
431 3rd5_A Mypaa.01249.C; ssgcid, 37.6 19 0.00065 35.1 3.2 32 2-39 17-48 (291)
432 2a4k_A 3-oxoacyl-[acyl carrier 37.5 19 0.00065 34.7 3.2 31 2-38 7-37 (263)
433 2qhx_A Pteridine reductase 1; 37.5 16 0.00056 36.6 2.8 31 2-38 47-77 (328)
434 2q2v_A Beta-D-hydroxybutyrate 37.4 19 0.00065 34.3 3.1 30 2-37 5-34 (255)
435 1e8c_A UDP-N-acetylmuramoylala 37.4 36 0.0012 36.3 5.6 34 2-39 109-142 (498)
436 3gv0_A Transcriptional regulat 37.3 92 0.0031 29.6 8.1 32 361-398 65-96 (288)
437 2x9g_A PTR1, pteridine reducta 37.3 16 0.00055 35.6 2.6 32 2-39 24-55 (288)
438 1db3_A GDP-mannose 4,6-dehydra 37.1 29 0.00098 34.6 4.6 33 1-39 1-33 (372)
439 2o23_A HADH2 protein; HSD17B10 37.1 22 0.00076 33.6 3.6 32 2-39 13-44 (265)
440 2bwj_A Adenylate kinase 5; pho 37.0 22 0.00077 31.9 3.4 24 2-27 13-36 (199)
441 1xhl_A Short-chain dehydrogena 37.0 17 0.00059 35.8 2.8 32 2-39 27-58 (297)
442 3uxy_A Short-chain dehydrogena 36.9 17 0.0006 35.1 2.8 30 2-37 29-58 (266)
443 1spx_A Short-chain reductase f 36.8 17 0.00059 34.9 2.8 32 2-39 7-38 (278)
444 2fn9_A Ribose ABC transporter, 36.7 1.5E+02 0.0051 27.9 9.5 34 361-398 57-90 (290)
445 2cfc_A 2-(R)-hydroxypropyl-COM 36.7 22 0.00074 33.4 3.4 32 2-39 3-34 (250)
446 1hxh_A 3BETA/17BETA-hydroxyste 36.7 17 0.00057 34.7 2.6 30 2-37 7-36 (253)
447 2p4h_X Vestitone reductase; NA 36.6 30 0.001 33.5 4.5 30 2-37 2-31 (322)
448 3e48_A Putative nucleoside-dip 36.5 30 0.001 33.2 4.4 34 1-41 1-35 (289)
449 2b4q_A Rhamnolipids biosynthes 36.5 19 0.00064 35.1 2.9 30 2-37 30-59 (276)
450 2q1w_A Putative nucleotide sug 36.5 30 0.001 34.1 4.6 33 1-39 21-53 (333)
451 2z1n_A Dehydrogenase; reductas 36.4 21 0.00071 34.1 3.2 31 2-38 8-38 (260)
452 1xkq_A Short-chain reductase f 36.2 18 0.00062 35.0 2.8 31 2-38 7-37 (280)
453 1ae1_A Tropinone reductase-I; 36.2 21 0.00072 34.5 3.3 31 2-38 22-52 (273)
454 3d02_A Putative LACI-type tran 36.2 1.8E+02 0.0062 27.4 10.1 34 361-398 60-93 (303)
455 1gee_A Glucose 1-dehydrogenase 36.1 19 0.00064 34.2 2.8 30 2-37 8-37 (261)
456 4e4y_A Short chain dehydrogena 36.1 19 0.00064 34.1 2.9 33 1-39 4-37 (244)
457 4id9_A Short-chain dehydrogena 36.0 28 0.00096 34.3 4.3 32 2-39 20-51 (347)
458 2qor_A Guanylate kinase; phosp 36.0 16 0.00056 33.6 2.4 24 2-27 13-36 (204)
459 1g0o_A Trihydroxynaphthalene r 36.0 21 0.00071 34.7 3.2 30 2-37 30-59 (283)
460 2bgk_A Rhizome secoisolaricire 36.0 21 0.00072 34.1 3.2 30 2-37 17-46 (278)
461 1xu9_A Corticosteroid 11-beta- 35.9 19 0.00066 34.9 2.9 32 2-39 29-60 (286)
462 3grp_A 3-oxoacyl-(acyl carrier 35.9 19 0.00065 34.8 2.9 30 2-37 28-57 (266)
463 2pnf_A 3-oxoacyl-[acyl-carrier 35.8 20 0.00067 33.6 2.9 31 2-38 8-38 (248)
464 3cxt_A Dehydrogenase with diff 35.8 21 0.00072 35.1 3.2 30 2-37 35-64 (291)
465 3tb6_A Arabinose metabolism tr 35.7 1.5E+02 0.0052 27.8 9.4 37 361-398 70-106 (298)
466 1udb_A Epimerase, UDP-galactos 35.7 33 0.0011 33.7 4.7 28 4-37 3-30 (338)
467 3gaf_A 7-alpha-hydroxysteroid 35.7 17 0.00058 34.8 2.5 30 2-37 13-42 (256)
468 2ehd_A Oxidoreductase, oxidore 35.6 20 0.0007 33.3 3.0 32 2-39 6-37 (234)
469 1zak_A Adenylate kinase; ATP:A 35.5 20 0.00068 33.3 2.9 25 1-27 5-29 (222)
470 1zk4_A R-specific alcohol dehy 35.4 20 0.00067 33.7 2.8 32 2-39 7-38 (251)
471 3vps_A TUNA, NAD-dependent epi 35.0 32 0.0011 33.2 4.4 32 2-39 8-39 (321)
472 3ake_A Cytidylate kinase; CMP 35.0 29 0.00099 31.4 3.9 23 3-27 4-26 (208)
473 3eag_A UDP-N-acetylmuramate:L- 34.5 72 0.0025 31.8 7.1 31 2-36 109-139 (326)
474 2r47_A Uncharacterized protein 34.5 8.7 0.0003 35.1 0.1 93 297-399 26-125 (157)
475 4eue_A Putative reductase CA_C 34.4 16 0.00056 38.5 2.3 33 2-38 61-93 (418)
476 1cyd_A Carbonyl reductase; sho 34.4 24 0.00081 33.0 3.2 31 2-38 8-38 (244)
477 3sc6_A DTDP-4-dehydrorhamnose 34.4 17 0.00059 34.8 2.3 33 1-39 4-37 (287)
478 3tpf_A Otcase, ornithine carba 34.4 73 0.0025 32.1 7.0 99 192-329 76-175 (307)
479 2x5o_A UDP-N-acetylmuramoylala 34.1 38 0.0013 35.4 5.1 32 2-37 105-136 (439)
480 1yxm_A Pecra, peroxisomal tran 34.0 23 0.00079 34.5 3.2 31 2-38 19-49 (303)
481 3m2p_A UDP-N-acetylglucosamine 33.9 36 0.0012 33.1 4.6 32 2-39 3-34 (311)
482 3fb4_A Adenylate kinase; psych 33.9 28 0.00096 32.0 3.6 23 3-27 2-24 (216)
483 1ek6_A UDP-galactose 4-epimera 33.9 32 0.0011 33.8 4.3 30 2-37 3-32 (348)
484 3kvo_A Hydroxysteroid dehydrog 33.9 23 0.00078 36.0 3.2 32 2-39 46-77 (346)
485 1sq5_A Pantothenate kinase; P- 33.9 39 0.0013 33.5 4.9 38 2-41 81-120 (308)
486 4ep1_A Otcase, ornithine carba 33.8 1.1E+02 0.0036 31.4 8.1 100 191-329 109-208 (340)
487 1n7h_A GDP-D-mannose-4,6-dehyd 33.7 35 0.0012 34.3 4.6 32 2-39 29-60 (381)
488 1vht_A Dephospho-COA kinase; s 33.7 37 0.0013 31.3 4.4 27 2-34 5-31 (218)
489 3e8x_A Putative NAD-dependent 33.6 41 0.0014 31.2 4.8 32 2-39 22-53 (236)
490 1yo6_A Putative carbonyl reduc 33.5 23 0.0008 32.9 3.0 32 2-39 4-37 (250)
491 3o74_A Fructose transport syst 33.4 1.5E+02 0.005 27.5 8.7 32 361-397 57-88 (272)
492 1t2a_A GDP-mannose 4,6 dehydra 33.4 40 0.0014 33.7 5.0 32 2-39 25-56 (375)
493 1jtv_A 17 beta-hydroxysteroid 33.3 19 0.00066 36.0 2.5 30 2-37 3-32 (327)
494 3d7l_A LIN1944 protein; APC893 33.2 26 0.0009 31.7 3.2 32 1-40 4-35 (202)
495 3d8u_A PURR transcriptional re 33.2 1.5E+02 0.0052 27.5 8.9 32 361-398 58-89 (275)
496 2pt5_A Shikimate kinase, SK; a 32.7 33 0.0011 29.9 3.7 23 3-27 2-24 (168)
497 2ydy_A Methionine adenosyltran 32.7 35 0.0012 33.1 4.3 31 2-38 3-33 (315)
498 1xq1_A Putative tropinone redu 32.7 23 0.00078 33.7 2.8 32 2-39 15-46 (266)
499 2cdn_A Adenylate kinase; phosp 32.7 37 0.0012 30.9 4.2 24 2-27 21-44 (201)
500 1gz6_A Estradiol 17 beta-dehyd 32.6 20 0.0007 35.8 2.6 30 2-37 10-39 (319)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.2e-183 Score=1475.33 Aligned_cols=529 Identities=48% Similarity=0.847 Sum_probs=506.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||||||||||+|||||||+|||||+|||+|||+|+++|+||||||||||||||||||||||+||+||||||||||||+|+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+|+++||+||||||++||+|||+|||||||||||||||||||+||+++|+ ..+||||||||||||||||||||+
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999995 368999999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCC
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGN 240 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~ 240 (561)
||+|||+.++|++|++||||||||||.++||+||||||||||+|||.|||||+||||++.++++++|+||||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcchhcHHHHhcchhhhhhhhcCCCccCCCCChhHHHHHHhhhc--CCCCceEEEEEeccCCCcccHHHHHH
Q 008567 241 ILNIHDVPNIWHVPLLLRNQNAHHSILKQLNLLSIAAPPNLQAWTKRAETYD--NLKNSVRIAMVGKYVGLADSYLSVVK 318 (561)
Q Consensus 241 Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l~~~~~~~~~~~w~~l~~~~~--~~~~~~~Iavvgky~~~~DaY~Si~~ 318 (561)
||+++|+||||++|++||+||+++.|+++|+|+. +.+++++|+++++++. ++.+.++||+||||.++.|||.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~~--~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLED--RQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCCC--CCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCCC--CCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 9999999999999999999999999999999974 5668999999999988 77888999999999999999999999
Q ss_pred HHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 319 ALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 319 aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
||+|+|.++.++|++.|++++++++.+. ++|+.|.++||||+|||||+++.++++.++++++++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998865421 12467899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCC-cccCCcccccCceeEEEcCCCcccccccCCceeEEeee
Q 008567 399 LGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGS-RTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERH 477 (561)
Q Consensus 399 LGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~-~~~~G~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h 477 (561)
+|||+|+++|||+++|++||+|+||++.+++|++.+|+++. ..++|++||+|.|+|.+.++ |+++++|| ...+.+||
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH 464 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH 464 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence 99999999999999999999999999999999999998754 47899999999999999988 99999997 66789999
Q ss_pred eeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCchHHHHHHHHHHHH
Q 008567 478 RHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATK 548 (561)
Q Consensus 478 ~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~~~LF~~Fi~aa~~ 548 (561)
||||+||+.+.+.+++.|++++|.++||. +|++|++++||++|||||||+.++|.++++||.+|+++|.+
T Consensus 465 rHryeVNs~h~q~l~~~GL~vsA~s~DG~-IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 465 RHRYEVNPKYVDILEDAGLVVSGISENGL-VEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp EECCEECHHHHHHHHHTTCEEEEECTTCC-EEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred cccceechHHHhhcccCCeEEEEEeCCCC-EEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 99999999998888889999999999995 99999999999999999999999998899999999999853
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=2.9e-156 Score=1281.42 Aligned_cols=529 Identities=51% Similarity=0.845 Sum_probs=490.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||||||||||+||+|||+++|||||||+++||+|++||+|||||||||||||+||||||||+||+||||||||||||+|+
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+|+|++|+|+||+|++||+|||+|+|+|+|||++|||||+||+||+++++ ..++|+||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999983 248999999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCC
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGN 240 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~ 240 (561)
||+|||+.++|++|++||||||||||+++||+|||||||||++|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcchhcHHHHhcchhhhhhhhcCCCccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHH
Q 008567 241 ILNIHDVPNIWHVPLLLRNQNAHHSILKQLNLLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKAL 320 (561)
Q Consensus 241 Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL 320 (561)
||++.|+||||+||++||+||++++++.+++++. ..+++..|.+++.++.++...++|+++|+|..+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~~--~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLEA--VIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCCC--CCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCCc--hhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 9999999999999999999999999999998863 45578899999999888877899999999999999999999999
Q ss_pred HHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008567 321 LHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGICLG 400 (561)
Q Consensus 321 ~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLG 400 (561)
.+++.+..+++.+.|+++++++++. +++.+.++||||||||||+++.++.+.++++++++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999988888889999986554211 335678999999999999999899999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCcCCCCCCCCCceeEecCC-CCcccCCcccccCceeEEEcCCCcccccccCCceeEEeeeee
Q 008567 401 MQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPE-GSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRH 479 (561)
Q Consensus 401 mQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~-~~~~~~G~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~H 479 (561)
||+|++++||++.++++++|.||++.+.+|++.+|++ .+.+|+|++||+|.+++.+.++ +++..+|+ ...+.++|+|
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~e~h~H 471 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVLERHRH 471 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEEEEEEE
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceeeeeccc
Confidence 9999999999999999999999998889999998875 3468899999999999999876 99999996 5677789999
Q ss_pred eeeeCcccccccccCCeEEEEEeCCC-----CeEEEEEeCCCCcEEEEcccCCCCCCCCCchHHHHHHHHHHHHh
Q 008567 480 RYEVNPEAIGVLEEAGLKFVGKDETG-----KRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 549 (561)
Q Consensus 480 rY~vn~~~v~~le~~gl~v~a~~~dg-----~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~~~LF~~Fi~aa~~~ 549 (561)
+|+||+.+.+.+.+.|++++|+++|| .++|++|++++|||+|||||||+.++|.++++||.+|++++.++
T Consensus 472 ~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 472 RYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAY 546 (550)
T ss_dssp SEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHH
T ss_pred eEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhh
Confidence 99999988877745799999999884 36999999999988899999999999988999999999998764
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=1.1e-155 Score=1275.50 Aligned_cols=527 Identities=46% Similarity=0.833 Sum_probs=490.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||||||||||+||+|||+++|||||+|+++||+|++||+|||||||||||||+||||||||+||+||||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+|+|++|+|+||+|++||+|||+|+|+|+|||++||+||+||++|++++ +++|+||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~--------~~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGG--------EGHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHH--------TTCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHh--------ccCCEEEEECCCChhhhhChHHH
Confidence 9999999999999999999999999999999999999999999999998 58999999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCC
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGN 240 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~ 240 (561)
||+|||+.++|++|++||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||+.++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcchhcHHHHhcchhhhhhhhcCCCccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHH
Q 008567 241 ILNIHDVPNIWHVPLLLRNQNAHHSILKQLNLLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKAL 320 (561)
Q Consensus 241 Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL 320 (561)
||++.|+||||+||++||+||++++++.+++++. ..+++..|.+++++++++...++||++|||..+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~~--~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNC--PEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCCC--CCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCCc--hhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 9999999999999999999999999999999863 45588999999999998888899999999999999999999999
Q ss_pred HHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008567 321 LHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGICLG 400 (561)
Q Consensus 321 ~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLG 400 (561)
.++|+++.++|.+.|+++++++++ +++.+.++||||||||||++..++.+.++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999998877888999987544211 113467899999999999998899999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCcCCCCCCCCCceeEec----------CCC-CcccCCcccccCceeEEEcCCCcccccccCC
Q 008567 401 MQISVIEFARSVLGLKRANSNEFDSETPNPVVIFM----------PEG-SRTHMGSTMRLGSRRTLFQTPDCVTSKLYRN 469 (561)
Q Consensus 401 mQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm----------~~~-~~~~~G~~mrlG~~~v~l~~~~s~l~~iyg~ 469 (561)
||+|++++||++.++++++|+||++.+.+|++.++ +++ ...++|++||+|.|++.+.++ +++.++|+
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg- 459 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYN- 459 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTT-
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcC-
Confidence 99999999999999999999999998999999988 332 246789999999999999887 99999997
Q ss_pred ceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCchHHHHHHHHHHHHh
Q 008567 470 AEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 549 (561)
Q Consensus 470 ~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~~~LF~~Fi~aa~~~ 549 (561)
...+.++|+|+|+||+.+.+.+++.|++++|+++||.++|++|++++|||+|||||||+.++|.++++||.+|+++|.++
T Consensus 460 ~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 539 (545)
T 1s1m_A 460 APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEF 539 (545)
T ss_dssp SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHH
T ss_pred CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 56778999999999999888776689999999999966999999999998899999999999998999999999998765
Q ss_pred h
Q 008567 550 L 550 (561)
Q Consensus 550 ~ 550 (561)
.
T Consensus 540 ~ 540 (545)
T 1s1m_A 540 Q 540 (545)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=7.1e-133 Score=978.23 Aligned_cols=272 Identities=69% Similarity=1.131 Sum_probs=229.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||||||||||+|||||||+|||||+|||++||+|+++|+||||||||||||||||||||||+||+||||||||||||+++
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+|+++||+||||||++||+|||+|+|||||||||||||||||+||+++|++|||+++.+|||||||+||||||||||||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCC
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGN 240 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~ 240 (561)
||+|||+.++|++|++|||||||||+.++||+||||||||||+||+.|||||+|+|||+.+++++.|+|||+||+|+.++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcchhcHHHHhcchhhhhhhhcCC
Q 008567 241 ILNIHDVPNIWHVPLLLRNQNAHHSILKQLNL 272 (561)
Q Consensus 241 Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l 272 (561)
||+.+|++++|+||++|++||+.+.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999875
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=4e-131 Score=974.10 Aligned_cols=273 Identities=68% Similarity=1.124 Sum_probs=231.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||||||||||+|||||||+|||||+|||+|||+|+++|+||||||||||||||||||||||+||+||||||||||||+++
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+|+++||+||||||++||+|||+|+|||+|||||||||||||+||+++|.+|+|+++.++||||||||||||||||+||+
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCC
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGN 240 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~ 240 (561)
||+|||+.++|++|++|||||||||+.++||+||||||||||+||+.|||||+||||++.+++++.|+|||+||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcchhcHHHHhcchhhhhhhhcCCC
Q 008567 241 ILNIHDVPNIWHVPLLLRNQNAHHSILKQLNLL 273 (561)
Q Consensus 241 Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l~ 273 (561)
||+++|++|+|+||+.|++||+.+.|+++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999884
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=1.1e-46 Score=386.26 Aligned_cols=273 Identities=48% Similarity=0.807 Sum_probs=224.6
Q ss_pred hHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc
Q 008567 282 QAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR 361 (561)
Q Consensus 282 ~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~ 361 (561)
.-|+.+++++.++...++|+|+|||.+.+++|.|+.++|+++|+++..+|.+.|+++++++......++..|+++|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (289)
T 2v4u_A 10 GVDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLC 89 (289)
T ss_dssp -------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHh
Confidence 35888888888887789999999998899999999999999999888888899999876543222223434566666788
Q ss_pred CCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcc
Q 008567 362 NAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRT 441 (561)
Q Consensus 362 ~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~ 441 (561)
++||||||||||++...+.++++++++++++|+||||+|||+|+.++|+++.|++++++.|++++.+++++.+|++....
T Consensus 90 ~~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~ 169 (289)
T 2v4u_A 90 KADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG 169 (289)
T ss_dssp HCSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTT
T ss_pred hCCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhccc
Confidence 99999999999998888899999999999999999999999999999999999999999999888888888888754444
Q ss_pred cCCcccccCceeEEEc-CCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEE
Q 008567 442 HMGSTMRLGSRRTLFQ-TPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYV 520 (561)
Q Consensus 442 ~~G~~mrlG~~~v~l~-~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~ 520 (561)
.+|++|++|.+++.+. ++ +.+.++++....++++|+|+|+||++++..+...|++++|.++||.++|++|++++||++
T Consensus 170 ~~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~l 248 (289)
T 2v4u_A 170 NLGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFV 248 (289)
T ss_dssp CSSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEE
T ss_pred ccCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEE
Confidence 5688999999999987 55 788888864357888999999999999988833899999999988559999999999888
Q ss_pred EEcccCCCCCCCCCchHHHHHHHHHHHHhhHHHHh
Q 008567 521 GVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLN 555 (561)
Q Consensus 521 GvQFHPE~~~~p~~~~~LF~~Fi~aa~~~~~~~~~ 555 (561)
|||||||+.+++.++++||.+|+++|.+++.++++
T Consensus 249 GvQfHPE~~~~~~~~~~lf~~Fv~~~~~~~~~~~~ 283 (289)
T 2v4u_A 249 GVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQ 283 (289)
T ss_dssp EESSBGGGGCBTTBCCHHHHHHHHHHHTCHHHHHH
T ss_pred EEECCCCCCCCCCchHHHHHHHHHHHHhhhhhhhh
Confidence 99999999998887899999999999998888874
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=4.8e-44 Score=363.83 Aligned_cols=251 Identities=41% Similarity=0.673 Sum_probs=211.4
Q ss_pred eEEEEEecc-CCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc
Q 008567 298 VRIAMVGKY-VGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG 376 (561)
Q Consensus 298 ~~Iavvgky-~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~ 376 (561)
++|||+||| ..+.|+|.|+.++|++++.++.+++.+.|+++++++..+. .++++.+.++||||||||||++.
T Consensus 9 ~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~-------~~~~~~~~~~dgiil~GG~~~~~ 81 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNA-------DEARKALLGCDGIFVPGGFGNRG 81 (273)
T ss_dssp EEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTT-------HHHHHHHHTCSEEEECCCCTTTT
T ss_pred CEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccc-------hhHHHHHhhCCEEEecCCCCCcC
Confidence 899999999 6888999999999999999988888999999866543110 00225578999999999999988
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeEEE
Q 008567 377 VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLF 456 (561)
Q Consensus 377 ~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v~l 456 (561)
..+.+.++++++++++|+||||+|||+|+.++|++|.++++++|+|++++++++++.+|+ .....++++|++|.+++.+
T Consensus 82 ~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~~ 160 (273)
T 2w7t_A 82 VDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVYI 160 (273)
T ss_dssp HHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEEE
T ss_pred chhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEEE
Confidence 888999999999999999999999999999999999999999999998877777776663 2223345577889999998
Q ss_pred cC-CCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCC----CCeEEEEEeCCCCcEEEEcccCCCCCC
Q 008567 457 QT-PDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDET----GKRMEILELPSHPFYVGVQFHPEFKSR 531 (561)
Q Consensus 457 ~~-~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~d----g~~vE~ie~~~~p~~~GvQFHPE~~~~ 531 (561)
.. + +.+.++++....++++|+|+|+|++++++.+++.+++++|+++| +.++|++++.++||++|||||||++++
T Consensus 161 ~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~~ 239 (273)
T 2w7t_A 161 VEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFIST 239 (273)
T ss_dssp CCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSCB
T ss_pred ecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCCC
Confidence 64 5 67788886556788899999999999887764578999999988 546999999999998999999999999
Q ss_pred CCCchHHHHHHHHHHHHhhHHHHhhh
Q 008567 532 PGRPSALFLGLILAATKQLEAYLNTH 557 (561)
Q Consensus 532 p~~~~~LF~~Fi~aa~~~~~~~~~~~ 557 (561)
+.++++||.+|+++|.+++.++++++
T Consensus 240 ~~~~~~l~~~Fv~~~~~~~~~~~~~~ 265 (273)
T 2w7t_A 240 PMDPAPTYLSFMAAAAKKDYVWPQKC 265 (273)
T ss_dssp TTBCCHHHHHHHHHHHTCCCCCCSSC
T ss_pred CCchHHHHHHHHHHHHHHHHhhhhcC
Confidence 88779999999999998887776554
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=4.7e-41 Score=355.18 Aligned_cols=276 Identities=18% Similarity=0.246 Sum_probs=210.9
Q ss_pred HHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhc-CCCccCCCCCh
Q 008567 203 ELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQL-NLLSIAAPPNL 281 (561)
Q Consensus 203 ~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l-~l~~~~~~~~~ 281 (561)
+.||.+|++.++|||+.++.+++||++.+|..|++.++|++|.++||| +|+++||++|+|++++..- ..+........
T Consensus 68 d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~iR~~G~~~~~i~~~~~~~~~~~~~~~ 146 (379)
T 1a9x_B 68 DEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLLREKGAQNGCIIAGDNPDAALALEKA 146 (379)
T ss_dssp GCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHHHHHCCEEEEEEESSSCCHHHHHHHH
T ss_pred hhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHHHhcCCeeEEEecCCCCCHHHHHHHH
Confidence 459999999999999999999999999999999999999999999999 9999999999999887542 11100000001
Q ss_pred hHH-----HHHHhhhcC-------CCC----------------ceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeee
Q 008567 282 QAW-----TKRAETYDN-------LKN----------------SVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSI 333 (561)
Q Consensus 282 ~~w-----~~l~~~~~~-------~~~----------------~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i 333 (561)
..| .+++..+++ +.. ..+|+++ || +.+ .|++++|+.+|+.+.+ +
T Consensus 147 ~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~-G~k---~ni~r~L~~~G~~v~v---v 218 (379)
T 1a9x_B 147 RAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DF-GAK---RNILRMLVDRGCRLTI---V 218 (379)
T ss_dssp HHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ES-SCC---HHHHHHHHHTTEEEEE---E
T ss_pred HhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-EC-CCh---HHHHHHHHHCCCEEEE---E
Confidence 111 123444332 111 3689999 79 454 8899999999988765 3
Q ss_pred EeecCCCcccccccCCCcchhhHHHhc-cCCCeEEEcCCCCCCc-hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccc
Q 008567 334 DWIAASDLEDESAKLTPKDHAAAWETL-RNAECVLVPGGFGDRG-VGGMILAAKYARENNIPYLGICLGMQISVIEFARS 411 (561)
Q Consensus 334 ~~i~~~~l~~~~~~~d~~~~~~~~~~l-~~~DGIilpGG~G~~~-~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~ 411 (561)
+|..+ . .+.. .++||||||||||++. ....+++++++++.++|+||||||||+|+.++|++
T Consensus 219 p~~~~--~---------------e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A~GG~ 281 (379)
T 1a9x_B 219 PAQTS--A---------------EDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAK 281 (379)
T ss_dssp ETTCC--H---------------HHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHTTSCCCEEEETHHHHHHHHHTTCC
T ss_pred eccCC--H---------------HHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHHHcCCCEEEECchHHHHHHHhCcE
Confidence 33211 0 0221 3799999999999985 46788999999988999999999999999999998
Q ss_pred ccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCccccccc
Q 008567 412 VLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVL 491 (561)
Q Consensus 412 v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~l 491 (561)
+.++ +++|+|++ +++...+. ++..+ ..++|+|.|+++. +
T Consensus 282 v~k~-----------------------~~gh~g~n-----~pv~~~~~---------g~v~i-ts~~H~~aV~~~~---L 320 (379)
T 1a9x_B 282 TVKM-----------------------KFGHHGGN-----HPVKDVEK---------NVVMI-TAQNHGFAVDEAT---L 320 (379)
T ss_dssp EEEE-----------------------EEEEEEEE-----EEEEETTT---------TEEEE-EEEEEEEEECSTT---C
T ss_pred EEec-----------------------ccccccCc-----eeeEecCC---------CcEEE-EecCccceEeccc---C
Confidence 7432 24566765 66653322 12334 3678999998643 3
Q ss_pred ccCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCchHHHHHHHHHHHH
Q 008567 492 EEAGLKFVGKD-ETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATK 548 (561)
Q Consensus 492 e~~gl~v~a~~-~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~~~LF~~Fi~aa~~ 548 (561)
+.++++++.+ +|+. +|+++++++| ++|+|||||++++|.+..+||++|++++.+
T Consensus 321 -p~~~~v~a~s~~Dg~-ieai~~~~~p-i~gVQFHPE~~~~p~d~~~Lf~~Fl~~~~~ 375 (379)
T 1a9x_B 321 -PANLRVTHKSLFDGT-LQGIHRTDKP-AFSFQGNPEASPGPHDAAPLFDHFIELIEQ 375 (379)
T ss_dssp -CTTEEEEEEETTTCC-EEEEEESSSS-EEEESSCTTCSSSCSTTTHHHHHHHHHHHH
T ss_pred -CCCeEEEEEeCCCCc-EEEEEECCCC-EEEEEeCCcCCCCcccHHHHHHHHHHHHHH
Confidence 5679999998 6787 9999999888 899999999999998889999999999865
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.96 E-value=1.7e-28 Score=246.65 Aligned_cols=210 Identities=20% Similarity=0.273 Sum_probs=146.6
Q ss_pred ceEEEEEeccCC----------CcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeE
Q 008567 297 SVRIAMVGKYVG----------LADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECV 366 (561)
Q Consensus 297 ~~~Iavvgky~~----------~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGI 366 (561)
++.|||..++.. ..-.|.+++++|+.+|+.+.+ +++....+ +.+.+.++|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~---lp~~~~~~---------------~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA---LPIDDPST---------------AVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEE---ECCCCGGG---------------HHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEE---EeCCCchH---------------HHHHHhhCCEE
Confidence 367888865311 111235799999999997754 33332211 22457899999
Q ss_pred EEcCCCC-------CCch-----------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCC
Q 008567 367 LVPGGFG-------DRGV-----------GGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETP 428 (561)
Q Consensus 367 ilpGG~G-------~~~~-----------~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~ 428 (561)
|||||++ .... ...+.++++++++++|+||||+|||+|+.++|+++. ++..+..
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~--~~~~~~~------ 137 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLY--QDISQVE------ 137 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEE--SSGGGSS------
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCcee--ccccccc------
Confidence 9999965 2111 237899999999999999999999999999999983 3332211
Q ss_pred CceeEecCCCCcccCC-cccccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCe
Q 008567 429 NPVVIFMPEGSRTHMG-STMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKR 507 (561)
Q Consensus 429 ~~vi~lm~~~~~~~~G-~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~ 507 (561)
.+ ...|++ ..+++|.+++.+.++ +.+.+.++....+++ .|++.+ +.+ +.|++++|.++||.
T Consensus 138 ~~--------~~~h~~~~~~~~g~~~v~~~~~-s~l~~~~~~~~~v~~--~H~~~v-----~~l-~~g~~v~a~s~dg~- 199 (254)
T 3fij_A 138 TK--------ALQHLQRVDEQLGSHTIDIEPT-SELAKHHPNKKLVNS--LHHQFI-----KKL-APSFKVTARTADGM- 199 (254)
T ss_dssp SC--------CCCCBCCSCTTSCCEEEEECTT-SSGGGTCCTTEEECC--BCSCEE-----SSC-CSSEEEEEEETTCC-
T ss_pred Cc--------cccccCCCCCccceEEEEeCCC-ChHHHhcCCcEEEEE--eccchh-----hcc-CCCcEEEEEeCCCc-
Confidence 00 111211 234567789999877 666677764334443 355544 344 78999999999996
Q ss_pred EEEEEeC-CCCcEEEEcccCCCCCCCCC-chHHHHHHHHHHHHhh
Q 008567 508 MEILELP-SHPFYVGVQFHPEFKSRPGR-PSALFLGLILAATKQL 550 (561)
Q Consensus 508 vE~ie~~-~~p~~~GvQFHPE~~~~p~~-~~~LF~~Fi~aa~~~~ 550 (561)
+|++++. ++||++|||||||+++++.. ..+||++|+++|.++.
T Consensus 200 ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~~ 244 (254)
T 3fij_A 200 IEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTM 244 (254)
T ss_dssp EEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHHH
Confidence 9999999 99999999999999988653 3799999999987654
No 10
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.94 E-value=7.2e-26 Score=221.61 Aligned_cols=189 Identities=17% Similarity=0.248 Sum_probs=136.8
Q ss_pred CceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCC-CCC
Q 008567 296 NSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGG-FGD 374 (561)
Q Consensus 296 ~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG-~G~ 374 (561)
.-+||.+++.+++.. .++.++|+.+|+.+.+ +++ +. ++ +.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v---v~~---~~--------~~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI---VPN---DI--------DS-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE---EET---TS--------CG-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE---EeC---CC--------CH-------HHHhCCCEEEECCCCCCC
Confidence 347999996665554 5789999999987654 222 11 01 45667999999999 777
Q ss_pred Cchh-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCcee
Q 008567 375 RGVG-GMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRR 453 (561)
Q Consensus 375 ~~~~-g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~ 453 (561)
.... ......++++++++|+||||+|||+|+.++|+++... ..++.| .++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~-----------------------~~~~~G------~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKA-----------------------KHPEFG------KTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEE-----------------------EEEEEE------EEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcC-----------------------CCcccC------cee
Confidence 5322 2333455667889999999999999999999887421 012233 457
Q ss_pred EEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCC
Q 008567 454 TLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPG 533 (561)
Q Consensus 454 v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~ 533 (561)
+.+.+++.++..+ +. .+..+|.|+|.+. .+ +.+++++|.++|+. ++++++++.+ ++|+|||||++.++.
T Consensus 119 v~~~~~~~l~~~~-~~--~~~v~~~H~~~v~-----~l-~~~~~vlA~s~d~~-i~ai~~~~~~-i~gvQfHPE~~~~~~ 187 (212)
T 2a9v_A 119 VSVMHSENIFGGL-PS--EITVWENHNDEII-----NL-PDDFTLAASSATCQ-VQGFYHKTRP-IYATQFHPEVEHTQY 187 (212)
T ss_dssp EEESCCCGGGTTC-CS--EEEEEEEEEEEEE-----SC-CTTEEEEEECSSCS-CSEEEESSSS-EEEESSCTTSTTSTT
T ss_pred eEECCCChhHhcC-CC--ceEEEeEhhhhHh-----hC-CCCcEEEEEeCCCC-EEEEEECCCC-EEEEEeCCCCCCCcc
Confidence 7776663444433 32 2345788998874 23 67899999999887 9999998877 899999999998664
Q ss_pred CchHHHHHHHHHHHHh
Q 008567 534 RPSALFLGLILAATKQ 549 (561)
Q Consensus 534 ~~~~LF~~Fi~aa~~~ 549 (561)
+.+||++|+++|.++
T Consensus 188 -g~~l~~~F~~~~~~~ 202 (212)
T 2a9v_A 188 -GRDIFRNFIGICASY 202 (212)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 689999999988654
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.93 E-value=5.9e-25 Score=212.00 Aligned_cols=181 Identities=15% Similarity=0.244 Sum_probs=127.8
Q ss_pred EEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc--CCCeEEEcCCCCCCch
Q 008567 300 IAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR--NAECVLVPGGFGDRGV 377 (561)
Q Consensus 300 Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~--~~DGIilpGG~G~~~~ 377 (561)
|+||+.+.+.. .++.++|+.+|+++.+ +..++.. ++.+. ++||||||||++++..
T Consensus 4 i~iid~~~s~~---~~~~~~l~~~G~~~~v------~~~~~~~--------------~~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSFV---YNIAQIVGELGSYPIV------IRNDEIS--------------IKGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSSH---HHHHHHHHHTTCEEEE------EETTTSC--------------HHHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCchH---HHHHHHHHhCCCEEEE------EeCCCCC--------------HHHHhhCCCCEEEECCCCCChhh
Confidence 89996554442 4788999999987654 2222100 12333 6999999999988643
Q ss_pred ---h-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCcee
Q 008567 378 ---G-GMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRR 453 (561)
Q Consensus 378 ---~-g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~ 453 (561)
. -..+.++++ +.++|+||||+|||+|+.++|+++.... ...| |.. ++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~----------------------~~~~-g~~-----~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRAR----------------------KVFH-GKI-----SN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEE----------------------EEEE-EEE-----EE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccC----------------------CCcC-CCc-----eE
Confidence 2 234777775 7899999999999999999999874311 0111 211 35
Q ss_pred EEEcCCC--cccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCCC
Q 008567 454 TLFQTPD--CVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKD-ETGKRMEILELPSHPFYVGVQFHPEFKS 530 (561)
Q Consensus 454 v~l~~~~--s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~-~dg~~vE~ie~~~~p~~~GvQFHPE~~~ 530 (561)
+.+.+++ .++..+ +. .+..++.|+|.+. .+ +.+++++|.+ ++|. +++++++++| ++|+|||||++.
T Consensus 112 v~~~~~~~~~l~~~~-~~--~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g~-i~a~~~~~~~-~~gvQfHPE~~~ 180 (195)
T 1qdl_B 112 IILVNNSPLSLYYGI-AK--EFKATRYHSLVVD-----EV-HRPLIVDAISAEDNE-IMAIHHEEYP-IYGVQFHPESVG 180 (195)
T ss_dssp EEECCSSCCSTTTTC-CS--EEEEEEEEEEEEE-----CC-CTTEEEEEEESSSCC-EEEEEESSSS-EEEESSBTTSTT
T ss_pred EEECCCCHhHHHhcC-CC--ceEEeccccchhh-----hC-CCCcEEEEEECCCCc-EEEEEeCCCC-EEEEecCCCCCC
Confidence 5554553 344433 32 3445788998874 23 6789999999 8886 9999999887 899999999998
Q ss_pred CCCCchHHHHHHHH
Q 008567 531 RPGRPSALFLGLIL 544 (561)
Q Consensus 531 ~p~~~~~LF~~Fi~ 544 (561)
++ .+.+||++|++
T Consensus 181 ~~-~g~~l~~~f~~ 193 (195)
T 1qdl_B 181 TS-LGYKILYNFLN 193 (195)
T ss_dssp CT-THHHHHHHHHH
T ss_pred Cc-cHHHHHHHHHh
Confidence 66 46899999987
No 12
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.93 E-value=4.6e-25 Score=211.30 Aligned_cols=183 Identities=20% Similarity=0.256 Sum_probs=128.7
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhc--cCCCeEEEcCCCCCCc
Q 008567 299 RIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETL--RNAECVLVPGGFGDRG 376 (561)
Q Consensus 299 ~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l--~~~DGIilpGG~G~~~ 376 (561)
.|+|++.+++. ..++.++|+.+|+.+.+ +.... + .+.+ .++||||+|||+ ++.
T Consensus 2 mi~iid~~~~~---~~~~~~~l~~~G~~~~~------~~~~~--------~-------~~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMDNGGQY---VHRIWRTLRYLGVETKI------IPNTT--------P-------LEEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEECSCTT---HHHHHHHHHHTTCEEEE------EETTC--------C-------HHHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEECCCch---HHHHHHHHHHCCCeEEE------EECCC--------C-------hHHhcccCCCEEEECCCC-Chh
Confidence 48999433333 26899999999987654 22211 0 1233 369999999998 553
Q ss_pred h-hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeEE
Q 008567 377 V-GGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTL 455 (561)
Q Consensus 377 ~-~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v~ 455 (561)
. ....+.++.+.+.++|+||||+|||+|+.++|+++..+ ..++.|++ .+.
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~-----------------------~~~~~G~~------~~~ 107 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRG-----------------------EKAEYSLV------EIE 107 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEEC-----------------------SCCSCEEE------EEE
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecC-----------------------CCcccCce------eEE
Confidence 2 23467777776889999999999999999999987431 11233443 444
Q ss_pred EcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCc
Q 008567 456 FQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRP 535 (561)
Q Consensus 456 l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~ 535 (561)
+.++++++..+ +. .+..+|.|.+.+. .+ +.+++++|.+++|. +++++++++| ++|+|||||+..++ .+
T Consensus 108 ~~~~~~l~~~~-~~--~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~-~~gvQfHPE~~~~~-~g 175 (189)
T 1wl8_A 108 IIDEXEIFKGL-PK--RLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELP-IYGVQFHPEVAHTE-KG 175 (189)
T ss_dssp ESCC--CCTTS-CS--EEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSC-EEEESSCTTSTTST-TH
T ss_pred EecCchHHhCC-CC--ceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCce-EEEEecCCCcCCCc-ch
Confidence 44444555443 22 3344677776552 34 67899999999986 9999999988 89999999998766 46
Q ss_pred hHHHHHHHHHHH
Q 008567 536 SALFLGLILAAT 547 (561)
Q Consensus 536 ~~LF~~Fi~aa~ 547 (561)
..+|++|+++|.
T Consensus 176 ~~l~~~f~~~~~ 187 (189)
T 1wl8_A 176 EEILRNFAKLCG 187 (189)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 899999998763
No 13
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.92 E-value=7.7e-26 Score=220.02 Aligned_cols=200 Identities=19% Similarity=0.203 Sum_probs=122.8
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-h
Q 008567 299 RIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG-V 377 (561)
Q Consensus 299 ~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~-~ 377 (561)
||+|| ||+.-. ..||.++|+++|+++.+ +. +| +.+.++||||+||| |++. .
T Consensus 4 ~I~ii-D~g~~n--~~si~~al~~~G~~~~v------~~-----------~~-------~~l~~~D~lilPG~-g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTGCAN--ISSVKFAIERLGYAVTI------SR-----------DP-------QVVLAADKLFLPGV-GTASEA 55 (211)
T ss_dssp CEEEE-CCCCTT--HHHHHHHHHHTTCCEEE------EC-----------CH-------HHHHHCSEEEECCC-SCHHHH
T ss_pred EEEEE-ECCCCh--HHHHHHHHHHCCCEEEE------EC-----------CH-------HHHhCCCEEEECCC-CCHHHH
Confidence 79999 895321 37999999999998755 22 12 56788999999974 4432 1
Q ss_pred ---hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCC-CCcccCCcccccCcee
Q 008567 378 ---GGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPE-GSRTHMGSTMRLGSRR 453 (561)
Q Consensus 378 ---~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~-~~~~~~G~~mrlG~~~ 453 (561)
......++.+++.++|+||||+|||+|+.++|+++..... ..+.-...+.+|..+... ....+.+++ .
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~--~~~gl~~~~~~v~~~~~~~~~~~~~~~~------~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADE--IVQCLGLVDGEVRLLQTGDLPLPHMGWN------T 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CC--CEECCCSSSCEEEECCCTTSCSSEEEEE------C
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCC--ccccceeccceEEEcccCCcceeeccce------e
Confidence 1122346777889999999999999999998887643211 111111123344332111 122333433 3
Q ss_pred EEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCC
Q 008567 454 TLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPG 533 (561)
Q Consensus 454 v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~ 533 (561)
+.....++++..+.. ...+ ++.|+|.+.+ +..++|.+++|. ..+..+.+.| ++|+|||||+++.
T Consensus 128 ~~~~~~~~l~~~l~~-~~~~--~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~-v~GvQFHPE~s~~-- 191 (211)
T 4gud_A 128 VQVKEGHPLFNGIEP-DAYF--YFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGN-YYGVQFHPERSSK-- 191 (211)
T ss_dssp CEECTTCGGGTTCCT-TCCE--EEEESEECCC---------CTTEEEEEESSS-EEEEEEEETT-EEEESSCGGGSHH--
T ss_pred eeeeccChhhcCCCC-CcEE--EEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCC-EEEEEccCEecCc--
Confidence 344455466666653 4444 5678887643 233567777776 5556666667 8999999998632
Q ss_pred CchHHHHHHHHHHHHhh
Q 008567 534 RPSALFLGLILAATKQL 550 (561)
Q Consensus 534 ~~~~LF~~Fi~aa~~~~ 550 (561)
.+..||++|++.+-++.
T Consensus 192 ~G~~ll~nFl~~~ge~~ 208 (211)
T 4gud_A 192 AGARLIQNFLELRGENL 208 (211)
T ss_dssp HHHHHHHHHHHC-----
T ss_pred cHHHHHHHHHHHhcccc
Confidence 35789999999876654
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.91 E-value=4.7e-25 Score=216.91 Aligned_cols=182 Identities=15% Similarity=0.167 Sum_probs=122.1
Q ss_pred eEEEEEeccC-CCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhc--cCCCeEEEcCCCCC
Q 008567 298 VRIAMVGKYV-GLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETL--RNAECVLVPGGFGD 374 (561)
Q Consensus 298 ~~Iavvgky~-~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l--~~~DGIilpGG~G~ 374 (561)
.+|+|+ ||+ +.. .++.++|+.+|+++.+ + +.+.. . +.+ .++||||||||+++
T Consensus 25 ~~I~ii-D~g~~~~---~~i~~~l~~~G~~~~v---v-~~~~~-~----------------~~l~~~~~dglil~Gg~~~ 79 (218)
T 2vpi_A 25 GAVVIL-DAGAQYG---KVIDRRVRELFVQSEI---F-PLETP-A----------------FAIKEQGFRAIIISGGPNS 79 (218)
T ss_dssp TCEEEE-ECSTTTT---HHHHHHHHHTTCCEEE---E-CTTCC-H----------------HHHHHHTCSEEEEEC----
T ss_pred CeEEEE-ECCCchH---HHHHHHHHHCCCEEEE---E-ECCCC-h----------------HHHhhcCCCEEEECCCCcc
Confidence 589999 664 232 5899999999987654 1 22211 0 222 57999999999876
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeE
Q 008567 375 RGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRT 454 (561)
Q Consensus 375 ~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v 454 (561)
+..+......+.+++.++|+||||+|||+|+.++|++|... ...++| .+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~-----------------------~~~~~G------~~~v 130 (218)
T 2vpi_A 80 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKK-----------------------SVREDG------VFNI 130 (218)
T ss_dssp -----CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEE-----------------------EECSCE------EEEE
T ss_pred cccccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeC-----------------------CCCccc------EEEE
Confidence 42111111223445789999999999999999999987431 012234 3577
Q ss_pred EEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCC
Q 008567 455 LFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGR 534 (561)
Q Consensus 455 ~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~ 534 (561)
.+.+++.++ +.++.... .++.|+|.+. .+ +.+++++|.+ ++ .++++++++.| ++|+|||||++.++.
T Consensus 131 ~~~~~~~l~-~~l~~~~~--v~~~H~~~v~-----~l-~~~~~vlA~s-~~-~i~ai~~~~~~-i~gvQfHPE~~~~~~- 197 (218)
T 2vpi_A 131 SVDNTCSLF-RGLQKEEV--VLLTHGDSVD-----KV-ADGFKVVARS-GN-IVAGIANESKK-LYGAQFHPEVGLTEN- 197 (218)
T ss_dssp EECTTSGGG-TTCCSEEE--EEECSEEEES-----SC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSCTTSTTSTT-
T ss_pred EEccCChhH-hcCCCCcE--EeehhhhHhh-----hc-CCCCEEEEEc-CC-eEEEEEECCCC-EEEEEcCCCCCCChh-
Confidence 777664444 44432333 4678898884 23 6789999998 56 59999998887 899999999998764
Q ss_pred chHHHHHHH-HHH
Q 008567 535 PSALFLGLI-LAA 546 (561)
Q Consensus 535 ~~~LF~~Fi-~aa 546 (561)
+.+||++|+ ++|
T Consensus 198 g~~l~~~F~~~~~ 210 (218)
T 2vpi_A 198 GKVILKNFLYDIA 210 (218)
T ss_dssp HHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHh
Confidence 689999999 655
No 15
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.91 E-value=1.6e-23 Score=201.41 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=121.0
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc--CCCeEEEcCCCCCC
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR--NAECVLVPGGFGDR 375 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~--~~DGIilpGG~G~~ 375 (561)
++|+||+.++++. .++.++|+.+|+++.+ +++-. .+ ++..+.+. +.|++|++||+|++
T Consensus 1 ~~i~iiDn~~s~~---~~i~~~l~~~G~~~~v---~~~~~--~~------------~~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDSFT---WNLADQLRTNGHNVVI---YRNHI--PA------------QTLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCSSH---HHHHHHHHHTTCEEEE---EETTS--CS------------HHHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCccHH---HHHHHHHHHCCCeEEE---EECCC--CH------------HHHHHHhhhccCCeEEECCCCcCc
Confidence 4799996565554 6889999999987755 22211 11 01112222 35679999999997
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeEE
Q 008567 376 GVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTL 455 (561)
Q Consensus 376 ~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v~ 455 (561)
...+....+..+.+.++|+||||+|||+|+.++|+++.... . ...|.. ...
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~---~--------------------~~~g~~------~~~ 111 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG---E--------------------ILHGKA------TSI 111 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC--------------------------CCSSEE------EEE
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCC---C--------------------cEecce------eEE
Confidence 54443444444567899999999999999999998763210 0 011221 111
Q ss_pred EcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCc
Q 008567 456 FQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRP 535 (561)
Q Consensus 456 l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~ 535 (561)
...+++++..+. ... ..++.|+|.+. .+ +.+++++|. .|+. ++++++.+.| ++|+|||||++.++. +
T Consensus 112 ~~~~~~l~~~~~-~~~--~v~~~H~~~v~-----~l-p~~~~v~a~-~~~~-~~ai~~~~~~-~~gvQfHPE~~~~~~-g 178 (192)
T 1i1q_B 112 EHDGQAMFAGLA-NPL--PVARYHSLVGS-----NV-PAGLTINAH-FNGM-VMAVRHDADR-VCGFQFHPESILTTQ-G 178 (192)
T ss_dssp EECCCGGGTTSC-SSE--EEEECCC---C-----CC-CTTCEEEEE-ETTE-EEEEEETTTT-EEEESSBTTSTTCTT-H
T ss_pred ecCCChHHhcCC-CCc--EEEechhhHhh-----hC-CCccEEEEC-CCCc-EEEEEECCCC-EEEEEccCcccCCcc-c
Confidence 123335555553 233 34677887763 33 667888884 4554 9999998887 899999999997764 6
Q ss_pred hHHHHHHHHHHH
Q 008567 536 SALFLGLILAAT 547 (561)
Q Consensus 536 ~~LF~~Fi~aa~ 547 (561)
..+|++|++.+.
T Consensus 179 ~~il~nf~~~~~ 190 (192)
T 1i1q_B 179 ARLLEQTLAWAQ 190 (192)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 899999998753
No 16
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.90 E-value=3.2e-24 Score=222.15 Aligned_cols=206 Identities=17% Similarity=0.157 Sum_probs=127.7
Q ss_pred CceEEEEEeccCCCc------ccH--HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEE
Q 008567 296 NSVRIAMVGKYVGLA------DSY--LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVL 367 (561)
Q Consensus 296 ~~~~Iavvgky~~~~------DaY--~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIi 367 (561)
.++.|||........ -+| .|+.++|+.+|+.+.+ + +.+. +. +++.+.+.++||||
T Consensus 29 ~~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v---v-~~~~-~~------------~~i~~~l~~~dgli 91 (315)
T 1l9x_A 29 KKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP---V-RLDL-TE------------KDYEILFKSINGIL 91 (315)
T ss_dssp CCCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE---E-CSSC-CH------------HHHHHHHHHSSEEE
T ss_pred CCCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE---E-ecCC-CH------------HHHHHHHhcCCEEE
Confidence 457999996542211 112 3789999999987654 2 1111 10 01223457899999
Q ss_pred EcCCCCCCc---h-hHHHHHHHHHHHc-----CCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCC
Q 008567 368 VPGGFGDRG---V-GGMILAAKYAREN-----NIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEG 438 (561)
Q Consensus 368 lpGG~G~~~---~-~g~i~~ir~a~e~-----~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~ 438 (561)
||||+++.. . +....+++.+++. ++|+||||+|||+|+.++|+++.. .. +
T Consensus 92 l~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~-~~-----~--------------- 150 (315)
T 1l9x_A 92 FPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLL-TA-----T--------------- 150 (315)
T ss_dssp ECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCC-EE-----E---------------
T ss_pred EeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccc-cc-----c---------------
Confidence 999998742 1 1112334444443 599999999999999999998521 00 0
Q ss_pred CcccCCcccccCceeEEEc---CCCcccccccCCc-------eeEEeeeeeeeeeCcccccc--cccCCeEEEEEeCCCC
Q 008567 439 SRTHMGSTMRLGSRRTLFQ---TPDCVTSKLYRNA-------EYVDERHRHRYEVNPEAIGV--LEEAGLKFVGKDETGK 506 (561)
Q Consensus 439 ~~~~~G~~mrlG~~~v~l~---~~~s~l~~iyg~~-------~~I~~~h~HrY~vn~~~v~~--le~~gl~v~a~~~dg~ 506 (561)
+..|.+ .++... ++ +.+.+.++.. ..+.. ++|+|.|++++++. ..+.+++++|.++||.
T Consensus 151 --~~~g~~-----~p~~~~~~~~~-s~L~~~~~~~~~~~l~~~~~~~-~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~ 221 (315)
T 1l9x_A 151 --DTVDVA-----MPLNFTGGQLH-SRMFQNFPTELLLSLAVEPLTA-NFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK 221 (315)
T ss_dssp --EEEEEE-----ECCEECSTTTT-CSTTTTSCHHHHHHHHHSCCEE-EEEEEECBHHHHHTCHHHHHHEEEEEEEESSS
T ss_pred --cccCCC-----CCeeeccCCCC-ChHHHhcChhhhhhccccceEE-EhhhhhcCccccccccccCCCCEEEEEcCCCC
Confidence 011111 222322 33 3443443211 12233 48999998766543 1267899999999886
Q ss_pred eEEEE---EeCCCCcEEEEcccCCCCC---C-----CC------CchHHHHHHHHHHHHhh
Q 008567 507 RMEIL---ELPSHPFYVGVQFHPEFKS---R-----PG------RPSALFLGLILAATKQL 550 (561)
Q Consensus 507 ~vE~i---e~~~~p~~~GvQFHPE~~~---~-----p~------~~~~LF~~Fi~aa~~~~ 550 (561)
+|++ ++++.| ++|||||||+.. + |+ ...+||++|+++|.++.
T Consensus 222 -ve~i~~i~~~~~~-i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~ 280 (315)
T 1l9x_A 222 -IEFISTMEGYKYP-VYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNN 280 (315)
T ss_dssp -CEEEEEEEESSSC-EEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred -EEEEEEeccCCCC-EEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence 6666 556666 899999999965 1 33 23599999999997644
No 17
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.90 E-value=4.9e-23 Score=228.19 Aligned_cols=205 Identities=20% Similarity=0.270 Sum_probs=135.3
Q ss_pred eEEEEEeccCCCcccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhc--cCCCeEEEcCCCCC
Q 008567 298 VRIAMVGKYVGLADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETL--RNAECVLVPGGFGD 374 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l--~~~DGIilpGG~G~ 374 (561)
.+|+|+ ||++. | .+|.++|+.+|+.+.+ ++| +. ++ +.+ .++|||||||||++
T Consensus 8 ~~Ilil-D~Gs~---~~~~I~r~lre~Gv~~ei---v~~-~~-~~----------------~~i~~~~~dgIIlsGGp~s 62 (556)
T 3uow_A 8 DKILVL-NFGSQ---YFHLIVKRLNNIKIFSET---KDY-GV-EL----------------KDIKDMNIKGVILSGGPYS 62 (556)
T ss_dssp CEEEEE-ESSCT---THHHHHHHHHHTTCCEEE---EET-TC-CG----------------GGTTTSCEEEEEECCCSCC
T ss_pred CEEEEE-ECCCc---cHHHHHHHHHHCCCeEEE---EEC-CC-CH----------------HHHhhcCCCEEEECCCCCc
Confidence 589999 78643 3 5899999999988765 222 21 11 233 37899999999987
Q ss_pred CchhH----HHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCC-------C---CCceeEecCCCCc
Q 008567 375 RGVGG----MILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSE-------T---PNPVVIFMPEGSR 440 (561)
Q Consensus 375 ~~~~g----~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~-------~---~~~vi~lm~~~~~ 440 (561)
+..++ ...+++.+.++++|+||||+|||+|+.++|++|... .+.|+... . .+|++..+++. .
T Consensus 63 ~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~---~~~E~G~~~l~~~~~~~~~~~p~v~~~~~~-~ 138 (556)
T 3uow_A 63 VTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS---KTSEYGCTDVNILRNDNINNITYCRNFGDS-S 138 (556)
T ss_dssp TTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEE---EEEEEEEEEEEECCTTGGGGCSGGGGC----C
T ss_pred ccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecC---CCcccCCcceeeccCcccccccceeccccc-c
Confidence 63221 224556677789999999999999999999998542 12333210 0 12222222221 1
Q ss_pred ccCCcccccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEE
Q 008567 441 THMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYV 520 (561)
Q Consensus 441 ~~~G~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~ 520 (561)
+|+||.. ..+.+...++++..+++. ....++.|+|.+. .+ +.|++++|.++++. ++++++++++ ++
T Consensus 139 ~~mg~~~----n~~~~~~~~~Lf~gl~~~--~~~v~~~H~d~V~-----~l-p~g~~vlA~s~~~~-i~ai~~~~~~-i~ 204 (556)
T 3uow_A 139 SAMDLYS----NYKLMNETCCLFENIKSD--ITTVWMNHNDEVT-----KI-PENFYLVSSSENCL-ICSIYNKEYN-IY 204 (556)
T ss_dssp CHHHHHT----TSCCCC--CGGGTTCCSS--EEEEEEEEEEEEE-----EC-CTTCEEEEEETTEE-EEEEEETTTT-EE
T ss_pred ccccccc----ccccccccchhhcccccC--ceEEEEEccceee-----cc-CCCcEEEEEeCCCC-EEEEEECCCC-EE
Confidence 3444411 112222233667666432 3334677887763 33 67999999999886 9999998888 79
Q ss_pred EEcccCCCCCCCCCchHHHHHHHHHH
Q 008567 521 GVQFHPEFKSRPGRPSALFLGLILAA 546 (561)
Q Consensus 521 GvQFHPE~~~~p~~~~~LF~~Fi~aa 546 (561)
|+|||||++.++ .+.+||.+|+..+
T Consensus 205 GvQFHPE~~~~~-~G~~ll~nFl~~i 229 (556)
T 3uow_A 205 GVQYHPEVYESL-DGELMFYNFAYNI 229 (556)
T ss_dssp EESSCTTSTTST-THHHHHHHHHTTT
T ss_pred EEEcCCCCCccc-cchHHHHHHHHHh
Confidence 999999999887 4799999999443
No 18
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.90 E-value=8.9e-24 Score=237.21 Aligned_cols=183 Identities=15% Similarity=0.168 Sum_probs=130.6
Q ss_pred ceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc
Q 008567 297 SVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG 376 (561)
Q Consensus 297 ~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~ 376 (561)
+.+|.|++.|.++. .++.++|+..|+.+.+ .+.+.. ..+.++|||||+||+|++.
T Consensus 446 Gk~IlviD~gdsf~---~~l~~~l~~~G~~v~V----v~~d~~------------------~~~~~~DgIIlsGGPg~p~ 500 (645)
T 3r75_A 446 GCRALIVDAEDHFT---AMIAQQLSSLGLATEV----CGVHDA------------------VDLARYDVVVMGPGPGDPS 500 (645)
T ss_dssp TCEEEEEESSCTHH---HHHHHHHHHTTCEEEE----EETTCC------------------CCGGGCSEEEECCCSSCTT
T ss_pred CCEEEEEECCccHH---HHHHHHHHHCCCEEEE----EECCCc------------------ccccCCCEEEECCCCCChh
Confidence 46899995554443 6899999999987655 222221 2246789999999999874
Q ss_pred hh------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccC
Q 008567 377 VG------GMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLG 450 (561)
Q Consensus 377 ~~------g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG 450 (561)
.. .+.++++++++.++|+||||+|||+|+.++|++|... ..++.|++
T Consensus 501 d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~-----------------------~~~~~G~~---- 553 (645)
T 3r75_A 501 DAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRR-----------------------EVPNQGIQ---- 553 (645)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-----------------------EEEEEEEE----
T ss_pred hhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcC-----------------------CCcccccc----
Confidence 32 3678889999999999999999999999999988431 12334554
Q ss_pred ceeEEEcCCCcccccccCCceeEEeeeeeeeeeCc--ccc-cccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCC
Q 008567 451 SRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNP--EAI-GVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPE 527 (561)
Q Consensus 451 ~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~--~~v-~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE 527 (561)
+++.+. +++++..+| |+|.++. +.+ ..+ +.|++++|.++|+. ++++++++ ++|||||||
T Consensus 554 -~~i~~~-~~~l~~~~~-----------~~~~v~~~h~~~~~~l-p~g~~v~A~s~dg~-i~Ai~~~~---~~GVQFHPE 615 (645)
T 3r75_A 554 -VEIDLF-GQRERVGFY-----------NTYVAQTVRDEMDVDG-VGTVAISRDPRTGE-VHALRGPT---FSSMQFHAE 615 (645)
T ss_dssp -EEEEET-TEEEEEEEE-----------EEEEEBCSCSEEEETT-TEEEEEEECTTTCB-EEEEEETT---EEEESSBTT
T ss_pred -eEEeee-cCcceecCC-----------CcEEEEEehhhccccC-CCCeEEEEEcCCCc-EEEEEcCC---EEEEEeCCe
Confidence 444443 223333333 3444421 222 223 67899999999987 99999763 699999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHhh
Q 008567 528 FKSRPGRPSALFLGLILAATKQL 550 (561)
Q Consensus 528 ~~~~p~~~~~LF~~Fi~aa~~~~ 550 (561)
+..++. +++||++|++.+....
T Consensus 616 ~~~t~~-G~~Ll~nFl~~~~~~~ 637 (645)
T 3r75_A 616 SVLTVD-GPRILGEAITHAIRRE 637 (645)
T ss_dssp STTCTT-HHHHHHHHHHHHTTTT
T ss_pred ecCCcc-hHHHHHHHHHHHHhcc
Confidence 998875 7999999999986543
No 19
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=1.6e-23 Score=199.91 Aligned_cols=180 Identities=17% Similarity=0.227 Sum_probs=115.4
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
+||+|+ ++ .++|.++.++|+.+|+.+.+ +... +.+.++||||||||++++.
T Consensus 1 m~i~vl-~~---~g~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVL-AI---QGDVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEE-CS---SSCCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEE-ec---CcchHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 479999 43 45679999999999986644 2221 3567899999999987542
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCce
Q 008567 377 ----VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSR 452 (561)
Q Consensus 377 ----~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~ 452 (561)
..+..+.+ +++++|+||||+|||+|+.++|+++.++ .. .+..+.. .. .|. ..+.+
T Consensus 53 ~~~~~~~~~~~i---~~~~~PilGIC~G~Qll~~~~gg~~~~l--------g~-~~~~~~~------~~-~~~--~~~~~ 111 (186)
T 2ywj_A 53 KLMKKYGLLEKI---KNSNLPILGTCAGMVLLSKGTGINQILL--------EL-MDITVKR------NA-YGR--QVDSF 111 (186)
T ss_dssp HHHHHTTHHHHH---HTCCCCEEEETHHHHHHSSCCSSCCCCC--------CC-SSEEEET------TT-TCS--SSCCE
T ss_pred hhhhccCHHHHH---HhcCCcEEEECHHHHHHHHHhCCCcCcc--------CC-CceeEEe------cc-CCC--cccce
Confidence 12233333 3789999999999999999998875211 00 0000000 00 011 01122
Q ss_pred eEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCC
Q 008567 453 RTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRP 532 (561)
Q Consensus 453 ~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p 532 (561)
... .++..+ ..+..++.|+|.++ .+++.+++++|.+ |+. +|++++. +++|+|||||+++.
T Consensus 112 ~~~-----~~~~~~----~~~~~~~~H~~~v~-----~l~~~~~~v~a~s-d~~-~~a~~~~---~~~gvQfHPE~~~~- 171 (186)
T 2ywj_A 112 EKE-----IEFKDL----GKVYGVFIRAPVVD-----KILSDDVEVIARD-GDK-IVGVKQG---KYMALSFHPELSED- 171 (186)
T ss_dssp EEE-----EEETTT----EEEEEEESSCCEEE-----EECCTTCEEEEEE-TTE-EEEEEET---TEEEESSCGGGSTT-
T ss_pred ecc-----cccccC----CcEEEEEEecceee-----ecCCCCeEEEEEE-CCE-EEEEeeC---CEEEEECCCCcCCc-
Confidence 221 122222 12333566877764 2225689999998 665 9999963 59999999998763
Q ss_pred CCchHHHHHHHHHHHH
Q 008567 533 GRPSALFLGLILAATK 548 (561)
Q Consensus 533 ~~~~~LF~~Fi~aa~~ 548 (561)
+.+||++|+++|.+
T Consensus 172 --g~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 172 --GYKVYKYFVENCVK 185 (186)
T ss_dssp --HHHHHHHHHHHHTC
T ss_pred --hhHHHHHHHHHHhh
Confidence 68999999998753
No 20
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.89 E-value=2.3e-23 Score=229.53 Aligned_cols=186 Identities=19% Similarity=0.341 Sum_probs=129.3
Q ss_pred eEEEEEeccCCCcccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc--CCCeEEEcCCCCC
Q 008567 298 VRIAMVGKYVGLADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR--NAECVLVPGGFGD 374 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~--~~DGIilpGG~G~ 374 (561)
.+|+|+ ||++. | .+|.++|+.+|+.+.+ ++|..+. +.+. ++|||||||||++
T Consensus 11 ~~I~Il-D~g~~---~~~~i~r~lr~~Gv~~~i---~p~~~~~------------------~~i~~~~~dgIILsGGp~s 65 (527)
T 3tqi_A 11 HRILIL-DFGSQ---YAQLIARRVREIGVYCEL---MPCDIDE------------------ETIRDFNPHGIILSGGPET 65 (527)
T ss_dssp SEEEEE-ECSCT---THHHHHHHHHHHTCEEEE---EETTCCS------------------SSSTTTCCSEEEECCCCC-
T ss_pred CeEEEE-ECCCc---cHHHHHHHHHHCCCeEEE---EECCCCH------------------HHHHhcCCCEEEECCcCcc
Confidence 589999 78533 3 4899999999998766 3442211 2222 6799999999988
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeE
Q 008567 375 RGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRT 454 (561)
Q Consensus 375 ~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v 454 (561)
...++.....+.+.+.++|+||||+|||+|+.++|++|... ...+ +|.+.+
T Consensus 66 v~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~-----------------------~~~e------~G~~~v 116 (527)
T 3tqi_A 66 VTLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRT-----------------------AKAE------FGHAQL 116 (527)
T ss_dssp --------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC----------------------------C------EEEEEE
T ss_pred cccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeC-----------------------CCcc------ccceEE
Confidence 65444455556667889999999999999999999987321 0112 344567
Q ss_pred EEcCCCcccccccCC-----ceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCC
Q 008567 455 LFQTPDCVTSKLYRN-----AEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFK 529 (561)
Q Consensus 455 ~l~~~~s~l~~iyg~-----~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~ 529 (561)
.+.+++.++..+... ......++.|+|.|. .+ +.|++++|.++++. ++++++.+++ ++|+|||||++
T Consensus 117 ~~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~GvQFHPE~~ 188 (527)
T 3tqi_A 117 RVLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS-----EL-PPGFEATACTDNSP-LAAMADFKRR-FFGLQFHPEVT 188 (527)
T ss_dssp EESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC-----SC-CTTCEEEEEETTEE-EEEEECSSSC-EEEESBCSSST
T ss_pred EEcCCChhhcCCccccccccccceEEEEEcccchh-----cc-CCCCEEEEEeCCCc-EEEEEcCCCC-EEEEEeccccc
Confidence 776654666666421 002344677887663 34 77999999998876 9999998888 79999999999
Q ss_pred CCCCCchHHHHHHHHHH
Q 008567 530 SRPGRPSALFLGLILAA 546 (561)
Q Consensus 530 ~~p~~~~~LF~~Fi~aa 546 (561)
.++. +..||.+|+..+
T Consensus 189 ~t~~-G~~ll~nF~~~i 204 (527)
T 3tqi_A 189 HTPQ-GHRILAHFVIHI 204 (527)
T ss_dssp TSTT-HHHHHHHHHHTT
T ss_pred cccc-cchhhhhhhhhc
Confidence 8874 689999999543
No 21
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.89 E-value=2.5e-22 Score=199.97 Aligned_cols=185 Identities=17% Similarity=0.122 Sum_probs=127.8
Q ss_pred CCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCC
Q 008567 295 KNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGD 374 (561)
Q Consensus 295 ~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~ 374 (561)
...++|.++-.+.... -.++.++|+..|+.+.+ +++-+.+.+ .+.+.++||||||||+++
T Consensus 10 ~~~~~~~~i~~~~~~~--~~~i~~~l~~~G~~v~v---~~~~~~~~~---------------~~~l~~~Dglil~GG~~~ 69 (239)
T 1o1y_A 10 HHHVRVLAIRHVEIED--LGMMEDIFREKNWSFDY---LDTPKGEKL---------------ERPLEEYSLVVLLGGYMG 69 (239)
T ss_dssp CCCCEEEEECSSTTSS--CTHHHHHHHHTTCEEEE---ECGGGTCCC---------------SSCGGGCSEEEECCCSCC
T ss_pred cceeEEEEEECCCCCC--chHHHHHHHhCCCcEEE---eCCcCcccc---------------ccchhcCCEEEECCCCcc
Confidence 3458899984432111 15788999999987653 111111111 135678999999999865
Q ss_pred Cc-------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCc-ccCCcc
Q 008567 375 RG-------VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSR-THMGST 446 (561)
Q Consensus 375 ~~-------~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~-~~~G~~ 446 (561)
+. .....++++++.++++|+||||+|||+|+.++|+++... .. +++
T Consensus 70 ~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~-----------------------~~g~~~--- 123 (239)
T 1o1y_A 70 AYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRG-----------------------KNGEEI--- 123 (239)
T ss_dssp TTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEC-----------------------TTCCEE---
T ss_pred ccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecC-----------------------CCCCcc---
Confidence 31 236788999999999999999999999999999887421 01 122
Q ss_pred cccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccC
Q 008567 447 MRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHP 526 (561)
Q Consensus 447 mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHP 526 (561)
|.+++...+++.++..+ +. .+..+|+|+|.+. + +.+++++|.++++. +|++++.+ ++|+||||
T Consensus 124 ---G~~~v~~~~~~~l~~~~-~~--~~~~~~~H~~~v~------l-p~~~~vlA~s~~~~-iea~~~~~---i~gvQfHP 186 (239)
T 1o1y_A 124 ---GWYFVEKVSDNKFFREF-PD--RLRVFQWHGDTFD------L-PRRATRVFTSEKYE-NQGFVYGK---AVGLQFHI 186 (239)
T ss_dssp ---EEEEEEECCCCGGGTTS-CS--EEEEEEEESEEEC------C-CTTCEEEEECSSCS-CSEEEETT---EEEESSBS
T ss_pred ---ccEEEEECCCCchHHhC-CC--CceeEeecCCccc------c-CCCCEEEEEcCCCC-EEEEEECC---EEEEEeCc
Confidence 34567665553444433 32 3445788998762 3 67899999998887 99999874 89999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHH
Q 008567 527 EFKSRPGRPSALFLGLILAATK 548 (561)
Q Consensus 527 E~~~~p~~~~~LF~~Fi~aa~~ 548 (561)
|++. .++.+|++....
T Consensus 187 E~~~------~~~~~~~~~~~~ 202 (239)
T 1o1y_A 187 EVGA------RTMKRWIEAYKD 202 (239)
T ss_dssp SCCH------HHHHHHHHHTHH
T ss_pred cCCH------HHHHHHHHHhHH
Confidence 9953 478888776544
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.89 E-value=5e-23 Score=226.82 Aligned_cols=184 Identities=20% Similarity=0.350 Sum_probs=128.4
Q ss_pred eEEEEEeccCCCcccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc--CCCeEEEcCCCCC
Q 008567 298 VRIAMVGKYVGLADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR--NAECVLVPGGFGD 374 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~--~~DGIilpGG~G~ 374 (561)
.+|+|+ ||++. | .++.++|+.+|+.+.+ ++|..+. +.+. ++|||||||||++
T Consensus 8 ~~IlIl-D~g~~---~~~~i~r~lr~~G~~~~i---~p~~~~~------------------~~i~~~~~dgiILsGGp~s 62 (525)
T 1gpm_A 8 HRILIL-DFGSQ---YTQLVARRVRELGVYCEL---WAWDVTE------------------AQIRDFNPSGIILSGGPES 62 (525)
T ss_dssp SEEEEE-ECSCT---THHHHHHHHHHTTCEEEE---EESCCCH------------------HHHHHHCCSEEEECCCSSC
T ss_pred CEEEEE-ECCCc---cHHHHHHHHHHCCCEEEE---EECCCCH------------------HHHhccCCCEEEECCcCcc
Confidence 689999 78533 3 4789999999988765 3332110 2222 6799999999987
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeE
Q 008567 375 RGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRT 454 (561)
Q Consensus 375 ~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v 454 (561)
...+......+.+++.++|+||||+|||+|+.++|++|.... ..+ +|.+.+
T Consensus 63 ~~~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~-----------------------~~e------~G~~~v 113 (525)
T 1gpm_A 63 TTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN-----------------------ERE------FGYAQV 113 (525)
T ss_dssp TTSTTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS-----------------------SCE------EEEEEE
T ss_pred ccccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC-----------------------Ccc------cceEEE
Confidence 532211112345567899999999999999999999984310 011 233566
Q ss_pred EEcCCCcccccccCCc------eeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCC
Q 008567 455 LFQTPDCVTSKLYRNA------EYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEF 528 (561)
Q Consensus 455 ~l~~~~s~l~~iyg~~------~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~ 528 (561)
.+.+++.++..+. .. .....++.|+|.|. .+ +.|++++|.++++. ++++++.+++ ++|+|||||+
T Consensus 114 ~~~~~~~L~~~l~-~~~~~~~~~~~~v~~~H~~~V~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-i~gvQFHPE~ 184 (525)
T 1gpm_A 114 EVVNDSALVRGIE-DALTADGKPLLDVWMSHGDKVT-----AI-PSDFITVASTESCP-FAIMANEEKR-FYGVQFHPEV 184 (525)
T ss_dssp EECSCCTTTTTCC-SEECTTSCEEEEEEEEECSEEE-----EC-CTTCEEEEECSSCS-CSEEEETTTT-EEEESBCTTS
T ss_pred EeCCCCHhhccCc-cccccccccceEEEEEccceee-----eC-CCCCEEEEECCCCC-EEEEEECCCC-EEEEecCCCC
Confidence 6655544554442 20 02233567777663 34 78999999999887 9999998887 8999999999
Q ss_pred CCCCCCchHHHHHHHHH
Q 008567 529 KSRPGRPSALFLGLILA 545 (561)
Q Consensus 529 ~~~p~~~~~LF~~Fi~a 545 (561)
+.++. +..||.+|+..
T Consensus 185 ~~~~~-g~~ll~nF~~~ 200 (525)
T 1gpm_A 185 THTRQ-GMRMLERFVRD 200 (525)
T ss_dssp TTSTT-HHHHHHHHHHT
T ss_pred Ccchh-HHHHHHHHHHh
Confidence 99875 78999999953
No 23
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.88 E-value=4.2e-23 Score=226.38 Aligned_cols=180 Identities=19% Similarity=0.241 Sum_probs=126.2
Q ss_pred EEEEeccCCCcccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhcc--CCCeEEEcCCCCCCc
Q 008567 300 IAMVGKYVGLADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLR--NAECVLVPGGFGDRG 376 (561)
Q Consensus 300 Iavvgky~~~~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~--~~DGIilpGG~G~~~ 376 (561)
|+|+ ||++. | .+|.++|+.+|+.+.+ ++|..+ .+.+. ++|||||||||++..
T Consensus 2 i~il-D~g~~---~~~~i~r~l~~~G~~~~i---~p~~~~------------------~~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGSQ---YTRLIARRLRELRAFSLI---LPGDAP------------------LEEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSCT---THHHHHHHHHTTTCCEEE---EETTCC------------------HHHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCCc---HHHHHHHHHHHCCCEEEE---EECCCC------------------HHHHHhcCCCEEEECCCCchhc
Confidence 7899 78532 3 4799999999988755 233211 03333 569999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCceeEEE
Q 008567 377 VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLF 456 (561)
Q Consensus 377 ~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~v~l 456 (561)
.+......+.+++.++|+||||+|||+|+.++|++|.... ..+.|+ +.+.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~-----------------------~~e~G~------~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG-----------------------RAEYGK------ALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC--------------------------CEEE------EECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC-----------------------CCccce------EEEEe
Confidence 2111112244567899999999999999999999884310 012233 34444
Q ss_pred cCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCCCch
Q 008567 457 QTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPS 536 (561)
Q Consensus 457 ~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~~~~ 536 (561)
.+ +.++..+. ....+ ++.|+|.|. .+ +.|++++|.++++. ++++++++++ ++|+|||||.+.++. +.
T Consensus 108 ~~-~~l~~~~~-~~~~v--~~~H~~~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~gvQFHPE~~~~~~-g~ 174 (503)
T 2ywb_A 108 HE-GPLFRGLE-GEVQV--WMSHQDAVT-----AP-PPGWRVVAETEENP-VAAIASPDGR-AYGVQFHPEVAHTPK-GM 174 (503)
T ss_dssp EC-SGGGTTCC-SCCEE--EEECSCEEE-----EC-CTTCEEEEECSSCS-CSEEECTTSS-EEEESBCTTSTTSTT-HH
T ss_pred cC-cHHhhcCC-CccEE--EEECCCccc-----cC-CCCCEEEEEECCCC-EEEEEeCCCC-EEEEecCCCcccccc-cH
Confidence 44 35565553 23444 567887763 34 78999999999887 9999998887 899999999998875 78
Q ss_pred HHHHHHHHHH
Q 008567 537 ALFLGLILAA 546 (561)
Q Consensus 537 ~LF~~Fi~aa 546 (561)
.||.+|++.|
T Consensus 175 ~ll~~F~~~~ 184 (503)
T 2ywb_A 175 QILENFLELA 184 (503)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999665
No 24
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.88 E-value=8.2e-22 Score=191.31 Aligned_cols=186 Identities=19% Similarity=0.198 Sum_probs=125.4
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
++|+|+ +|.... ...++.++|+.+|+.+.+ +... +.+.++|+||||||++...
T Consensus 3 ~~i~il-~~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVV-VYPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEE-CCTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEE-EcCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 589999 675432 225789999999987644 2221 2356789999999975321
Q ss_pred --------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH--hcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcc
Q 008567 377 --------VGGMILAAKYARENNIPYLGICLGMQISVIE--FARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGST 446 (561)
Q Consensus 377 --------~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie--~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~ 446 (561)
.....+.++.+.++++|+||||+|||+|+.+ +++.+... +. ...|.|+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~--------------------~~-~~~~~g~- 114 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQN--------------------SS-GKFICKW- 114 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECC--------------------SS-SSCBCCE-
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecC--------------------CC-CceEeee-
Confidence 2456788898888999999999999999988 55544210 00 0013343
Q ss_pred cccCceeEEEc-CCCcccccccCCceeEEeeeee---eeeeCcccccccccCCeEEEEEeCC--C--CeEEEEEeCCCCc
Q 008567 447 MRLGSRRTLFQ-TPDCVTSKLYRNAEYVDERHRH---RYEVNPEAIGVLEEAGLKFVGKDET--G--KRMEILELPSHPF 518 (561)
Q Consensus 447 mrlG~~~v~l~-~~~s~l~~iyg~~~~I~~~h~H---rY~vn~~~v~~le~~gl~v~a~~~d--g--~~vE~ie~~~~p~ 518 (561)
+++.+. +++.++..+ +....+.....| +|.+.+ .++.++|.+++ | ..+|++++++.+
T Consensus 115 -----~~v~~~~~~~~l~~~~-~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~- 179 (213)
T 3d54_D 115 -----VDLIVENNDTPFTNAF-EKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGN- 179 (213)
T ss_dssp -----EEEEECCCSSTTSTTS-CTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSC-
T ss_pred -----EEEEeCCCCCceeecc-CCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCC-
Confidence 567776 443444333 322234332345 888743 46778888765 6 359999987666
Q ss_pred EEEEcccCCCCCCC----CCchHHHHHHHHHH
Q 008567 519 YVGVQFHPEFKSRP----GRPSALFLGLILAA 546 (561)
Q Consensus 519 ~~GvQFHPE~~~~p----~~~~~LF~~Fi~aa 546 (561)
++|+|||||++... .....||++|++.+
T Consensus 180 ~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 180 VFGLMPHPERAVEELIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp EEEECSCSTTTTSTTTTCSTTSHHHHHHHHHC
T ss_pred EEEEeCCHHHhcCHhhhcCccHHHHHHHHHHh
Confidence 89999999999842 45689999999875
No 25
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.86 E-value=3.7e-21 Score=190.97 Aligned_cols=184 Identities=15% Similarity=0.177 Sum_probs=127.5
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
+||+++ ..... +....+.++|+..|+++.+ +.....+.+ | +.+.++||||||||++++.
T Consensus 1 m~i~vi-~h~~~-e~~g~~~~~l~~~g~~~~~---~~~~~~~~~--------p-------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFI-LHETF-EAPGAYLAWAALRGHDVSM---TKVYRYEKL--------P-------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEE-ECCTT-SCCHHHHHHHHHTTCEEEE---EEGGGTCCC--------C-------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEE-eCCCC-CCchHHHHHHHHCCCeEEE---EeeeCCCCC--------C-------CCccccCEEEECCCCCCccc
Confidence 367777 44222 3346788999999988755 111111111 1 3467899999999998742
Q ss_pred -------h--hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCccc
Q 008567 377 -------V--GGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTM 447 (561)
Q Consensus 377 -------~--~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~m 447 (561)
+ ....++++.+.+.++|+||||+|||+|+.++|++|... ..+++|
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~-----------------------~~~~~G--- 114 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHS-----------------------PKKEIG--- 114 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEE-----------------------EEEEEE---
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecC-----------------------CCceee---
Confidence 1 23788999999999999999999999999999887321 112334
Q ss_pred ccCceeEEEcC---CCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcc
Q 008567 448 RLGSRRTLFQT---PDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQF 524 (561)
Q Consensus 448 rlG~~~v~l~~---~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQF 524 (561)
.+++.+.+ .++++..+. . .+..+|.|++. ..+ +.+++++|.++++. ++++++.+ + ++|+||
T Consensus 115 ---~~~v~~~~~~~~~~l~~~~~-~--~~~v~~~H~~~------~~l-p~~~~vla~s~~~~-~~a~~~~~-~-v~gvQf 178 (236)
T 3l7n_A 115 ---NYLISLTEAGKMDSYLSDFS-D--DLLVGHWHGDM------PGL-PDKAQVLAISQGCP-RQIIKFGP-K-QYAFQC 178 (236)
T ss_dssp ---EEEEEECTTGGGCGGGTTSC-S--EEEEEEEEEEE------CCC-CTTCEEEEECSSCS-CSEEEEET-T-EEEESS
T ss_pred ---eEEEEEccCcccChHHhcCC-C--CcEEEEecCCc------ccC-CChheEEEECCCCC-EEEEEECC-C-EEEEEe
Confidence 45777765 234554442 2 33446778754 223 67899999998887 99999875 4 999999
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHh
Q 008567 525 HPEFKSRPGRPSALFLGLILAATKQ 549 (561)
Q Consensus 525 HPE~~~~p~~~~~LF~~Fi~aa~~~ 549 (561)
|||++ ..++.+|++.....
T Consensus 179 HPE~~------~~~~~~~~~~~~~~ 197 (236)
T 3l7n_A 179 HLEFT------PELVAALIAQEDDL 197 (236)
T ss_dssp BSSCC------HHHHHHHHHHCSCH
T ss_pred CCCCC------HHHHHHHHHhhhhh
Confidence 99997 57888898876543
No 26
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.86 E-value=3.2e-22 Score=193.22 Aligned_cols=184 Identities=22% Similarity=0.302 Sum_probs=116.8
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcC-----ceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCC
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHAC-----IACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGF 372 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag-----~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~ 372 (561)
++|+|+ +|+. ..|.|+.++|+.+| +++.+ +... +. .++||||||||
T Consensus 1 m~I~ii-d~~~--g~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVGP--GNIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCSS--SCCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecCC--chHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC-
Confidence 479999 7851 12488899999999 66543 3321 23 67899999885
Q ss_pred CCCch-------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhc--ccccccccCCcCCCCCCCCCceeEecCCCCcccC
Q 008567 373 GDRGV-------GGMILAAKYARENNIPYLGICLGMQISVIEFA--RSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHM 443 (561)
Q Consensus 373 G~~~~-------~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g--~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~ 443 (561)
|++.. .+..+.++++.+.++|+||||+|||+|+.++| ++.-++. . ....+.. ++..+.+|+
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~-----~----~~g~v~~-~~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLS-----L----IEGNVVK-LRSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCC-----S----SSEEEEE-CCCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcc-----e----eeeEEEE-cCCCCCCcc
Confidence 55421 13668888888899999999999999998876 3321110 0 0111111 110012333
Q ss_pred CcccccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCC-CCeEEEEEeCCCCcEEEE
Q 008567 444 GSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDET-GKRMEILELPSHPFYVGV 522 (561)
Q Consensus 444 G~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~d-g~~vE~ie~~~~p~~~Gv 522 (561)
|| +++..... + .. ...++.|+|.+.+. +++++|.+++ |..++++++.+ + ++|+
T Consensus 122 g~------~~l~~~~~-~-------~~--~~v~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~-i~gv 175 (201)
T 1gpw_B 122 GW------NEVIFKDT-F-------PN--GYYYFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-R-ILGF 175 (201)
T ss_dssp EE------EEEEESSS-S-------CC--EEEEEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-T-EEEE
T ss_pred cc------eeeEeccC-C-------CC--CeEEEECcceeccC--------CCEEEEEEccCCceEEEEEECC-C-EEEE
Confidence 43 34443222 1 11 22356788877531 4567888765 63489999875 5 8999
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHH
Q 008567 523 QFHPEFKSRPGRPSALFLGLILAATK 548 (561)
Q Consensus 523 QFHPE~~~~p~~~~~LF~~Fi~aa~~ 548 (561)
|||||++ +.....||++|++++..
T Consensus 176 QfHPE~~--~~~~~~l~~~f~~~~~~ 199 (201)
T 1gpw_B 176 QFHPEKS--SKIGRKLLEKVIECSLS 199 (201)
T ss_dssp SSCGGGS--HHHHHHHHHHHHHHSSC
T ss_pred ECCCccc--CHhHHHHHHHHHHHhhc
Confidence 9999999 23357999999988643
No 27
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.85 E-value=5.1e-21 Score=187.76 Aligned_cols=186 Identities=13% Similarity=0.183 Sum_probs=119.5
Q ss_pred CceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCC
Q 008567 296 NSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDR 375 (561)
Q Consensus 296 ~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~ 375 (561)
..++|+|+ ++ .+.|.+++++|+.+|+.+.+ +... +.+.++||||||||++..
T Consensus 22 ~~~~I~il-~~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVL-GL---QGAVREHVRAIEACGAEAVI------VKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEE-SC---GGGCHHHHHHHHHTTCEEEE------ECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEE-eC---CCCcHHHHHHHHHCCCEEEE------ECCH------------------HHHhhCCEEEECCCChHH
Confidence 45899999 55 34568888999999986543 3321 346789999999998643
Q ss_pred c-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccC
Q 008567 376 G-----VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLG 450 (561)
Q Consensus 376 ~-----~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG 450 (561)
. .....+.++++.++++|+||||+|||+|+.++|+++. ++... + ++.... ...|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~--~~lg~--~------~~~~~~-----~~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDE--PHLGL--M------DITVER-----NSFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCC--CCCCC--E------EEEEEC-----HHHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCc--CCcCc--c------ceEEEe-----cCCCc--ccc
Confidence 1 1344688899999999999999999999999887651 11100 0 000000 00111 111
Q ss_pred ceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCC
Q 008567 451 SRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKS 530 (561)
Q Consensus 451 ~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~ 530 (561)
.+... ..+..+ + ..+...+.|++.+ ..+ +.++.++|.+ |+. +|+++. ++++|+|||||++.
T Consensus 137 ~~~~~-----~~~~g~-g--~~~~~~~~h~~~v-----~~l-~~~~~v~a~s-dg~-~ea~~~---~~i~GvQfHPE~~~ 197 (219)
T 1q7r_A 137 SFEAE-----LSIKGV-G--DGFVGVFIRAPHI-----VEA-GDGVDVLATY-NDR-IVAARQ---GQFLGCSFHPELTD 197 (219)
T ss_dssp CEEEE-----EEETTT-E--EEEEEEESSCCEE-----EEE-CTTCEEEEEE-TTE-EEEEEE---TTEEEESSCGGGSS
T ss_pred ceecC-----cccCCC-C--CceEEEEEeccee-----ecc-CCCcEEEEEc-CCE-EEEEEE---CCEEEEEECcccCC
Confidence 12111 111111 2 1233345566544 334 6789999988 664 999997 35999999999985
Q ss_pred CCCCchHHHHHHHHHHHHh
Q 008567 531 RPGRPSALFLGLILAATKQ 549 (561)
Q Consensus 531 ~p~~~~~LF~~Fi~aa~~~ 549 (561)
. ..+|++|++++.++
T Consensus 198 ~----~~l~~~fl~~~~~~ 212 (219)
T 1q7r_A 198 D----HRLMQYFLNMVKEA 212 (219)
T ss_dssp C----CHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHh
Confidence 4 38999999988653
No 28
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.85 E-value=3.4e-21 Score=217.94 Aligned_cols=180 Identities=17% Similarity=0.202 Sum_probs=120.7
Q ss_pred ceEEEEEeccCCCcccHH-HHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhc--cCCCeEEEcCCCC
Q 008567 297 SVRIAMVGKYVGLADSYL-SVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETL--RNAECVLVPGGFG 373 (561)
Q Consensus 297 ~~~Iavvgky~~~~DaY~-Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l--~~~DGIilpGG~G 373 (561)
..+|+|+ ||++. |. .+.+.|+.+|+.+.+ ++|..+. +.+ .++|||||||||+
T Consensus 29 ~~~I~VL-Dfg~q---~~~liar~lre~Gv~~~i---vp~~~~~------------------e~i~~~~~dGIILsGGp~ 83 (697)
T 2vxo_A 29 EGAVVIL-DAGAQ---YGKVIDRRVRELFVQSEI---FPLETPA------------------FAIKEQGFRAIIISGGPN 83 (697)
T ss_dssp CCCEEEE-EEC-----CHHHHHHHHHHTTCCEEE---EETTCCH------------------HHHHHHTCSEEEEEECC-
T ss_pred CCEEEEE-ECCCc---hHHHHHHHHHHCCCEEEE---EECCCCH------------------HHHhhcCCCEEEECCCCC
Confidence 3579999 67542 33 478999999988765 3332210 223 5899999999998
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCcee
Q 008567 374 DRGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRR 453 (561)
Q Consensus 374 ~~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~~ 453 (561)
++..++.....+.+.+.++|+||||+|||+|+.++|++|... ...+.| .++
T Consensus 84 s~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~-----------------------~~~e~G------~~~ 134 (697)
T 2vxo_A 84 SVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKK-----------------------SVREDG------VFN 134 (697)
T ss_dssp ------CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEE
T ss_pred cccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeec-----------------------CCCccc------eEE
Confidence 752111111123345678999999999999999999988431 112234 357
Q ss_pred EEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCCC
Q 008567 454 TLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPG 533 (561)
Q Consensus 454 v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p~ 533 (561)
+.+.+++.++..+ +....+ ++.|+|.|. .+ +.|++++|.++ + .++++++.+++ ++|+|||||...++.
T Consensus 135 v~~~~~~~Lf~~l-~~~~~v--~~~H~~~V~-----~l-p~g~~vlA~s~-~-~i~ai~~~~~~-i~GvQFHPE~~~t~~ 202 (697)
T 2vxo_A 135 ISVDNTCSLFRGL-QKEEVV--LLTHGDSVD-----KV-ADGFKVVARSG-N-IVAGIANESKK-LYGAQFHPEVGLTEN 202 (697)
T ss_dssp EEECTTSGGGTTC-CSEEEE--CCCSSCCBS-----SC-CTTCEEEEEET-T-EEEEEEETTTT-EEEESSCTTSSSSTT
T ss_pred EEecCCChhhhcC-CccCcc--eeeccccee-----cC-CCCeEEEEEeC-C-ceEEEEeCCCC-EEEEEecccCCCCcc
Confidence 7776664455444 323334 566887763 34 67999999984 4 59999999888 899999999998885
Q ss_pred CchHHHHHHH
Q 008567 534 RPSALFLGLI 543 (561)
Q Consensus 534 ~~~~LF~~Fi 543 (561)
+..||.+|+
T Consensus 203 -g~~ll~nFl 211 (697)
T 2vxo_A 203 -GKVILKNFL 211 (697)
T ss_dssp -HHHHHHHHH
T ss_pred -chhhhhhhh
Confidence 689999999
No 29
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.84 E-value=1.4e-20 Score=188.79 Aligned_cols=170 Identities=16% Similarity=0.179 Sum_probs=118.4
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCC--
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDR-- 375 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~-- 375 (561)
.+|.++ .-... ....++.++|+..|+++.+. .....+ ..| +.+.++||||||||++++
T Consensus 4 ~~vlii-qh~~~-e~~~~i~~~l~~~G~~v~v~----~~~~~~-------~~p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMII-QFSAS-EGPGHFGDFLAGEHIPFQVL----RMDRSD-------PLP-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEE-ESSSS-CCCHHHHHHHHHTTCCEEEE----EGGGTC-------CCC-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEE-ECCCC-CCHHHHHHHHHHCCCeEEEE----eccCCC-------cCc-------CccccCCEEEECCCCCcccc
Confidence 467777 32221 11278899999999887551 111111 001 346789999999998763
Q ss_pred ---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCce
Q 008567 376 ---GVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSR 452 (561)
Q Consensus 376 ---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~ 452 (561)
.+....+.++.+.+.++|+||||+|||+|+.++|++|... ..+++|| +
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~-----------------------~~~e~G~------~ 114 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDS-----------------------PHAEIGW------V 114 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-----------------------EEEEEEE------E
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeC-----------------------CCCceee------E
Confidence 2356678889988899999999999999999999988431 1133454 4
Q ss_pred eEEEcCC---CcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCC
Q 008567 453 RTLFQTP---DCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFK 529 (561)
Q Consensus 453 ~v~l~~~---~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~ 529 (561)
++.+.+. ++++ .+. ..+..+|+|+|.+ .+ +.++.++|.++++. ++++++.++ ++|+|||||++
T Consensus 115 ~v~~~~~~~~~~l~-g~~---~~~~v~~~H~~~v------~l-p~~~~vlA~s~~~~-~~a~~~~~~--~~GvQfHPE~~ 180 (250)
T 3m3p_A 115 RAWPQHVPQALEWL-GTW---DELELFEWHYQTF------SI-PPGAVHILRSEHCA-NQAYVLDDL--HIGFQCHIEMQ 180 (250)
T ss_dssp EEEECSSHHHHHHH-SCS---SCEEEEEEEEEEE------CC-CTTEEEEEEETTEE-EEEEEETTT--EEEESSCTTCC
T ss_pred EEEEecCCCCcccc-cCC---CccEEEEEcccee------ec-CCCCEEEEEeCCCC-EEEEEECCe--eEEEEeCCcCC
Confidence 6776543 2344 432 2344578888876 23 67899999999886 999999873 89999999996
Q ss_pred C
Q 008567 530 S 530 (561)
Q Consensus 530 ~ 530 (561)
.
T Consensus 181 ~ 181 (250)
T 3m3p_A 181 A 181 (250)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.84 E-value=1.5e-20 Score=179.58 Aligned_cols=180 Identities=17% Similarity=0.182 Sum_probs=115.3
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCC-Cc
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGD-RG 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~-~~ 376 (561)
++|||+ .+ .+.+.++.++|+.+|+.+.+ +... +.+.++|||+||||++. ..
T Consensus 3 p~Igi~-~~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVL-AL---QGDFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEE-CS---SSCHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEE-ec---CCchHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 689999 34 24568999999999987654 2221 34678999999999643 11
Q ss_pred ----hhHHHHHHHHHHHcC-CCEEEEehhHHHHHHHhcc-cccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccC
Q 008567 377 ----VGGMILAAKYARENN-IPYLGICLGMQISVIEFAR-SVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLG 450 (561)
Q Consensus 377 ----~~g~i~~ir~a~e~~-iPvLGICLGmQLL~ie~g~-~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG 450 (561)
.....+.++.+.+++ +|+||||+|||+|+.++|+ ++ .++... + +..+ . . ...|.. ..
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~--~~~lg~--~----~~~~-~-----~-~~~g~~--~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPE--QPRLGV--L----EAWV-E-----R-NAFGRQ--VE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTT--CCCCCC--E----EEEE-E-----T-TCSCCS--SS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCC--Cccccc--c----ceEE-E-----c-CCcCCc--cc
Confidence 134678888888889 9999999999999999886 43 111100 0 0000 0 0 001211 11
Q ss_pred ceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCC
Q 008567 451 SRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKS 530 (561)
Q Consensus 451 ~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~ 530 (561)
.+... ..+..+ ..+..++.|+|.+. .+ +.+++++|.+ |+ .+|++++.+ ++|+|||||+++
T Consensus 118 ~~~~~-----~~~~~~----~~~~~~~~Hs~~v~-----~l-~~~~~~~a~~-~~-~~~a~~~~~---~~gvQfHPE~~~ 177 (191)
T 2ywd_A 118 SFEED-----LEVEGL----GSFHGVFIRAPVFR-----RL-GEGVEVLARL-GD-LPVLVRQGK---VLASSFHPELTE 177 (191)
T ss_dssp EEEEE-----EEETTT----EEEEEEEESCCEEE-----EE-CTTCEEEEEE-TT-EEEEEEETT---EEEESSCGGGSS
T ss_pred ccccc-----ccccCC----CceeEEEEccccee-----cc-CCCcEEEEEE-CC-EEEEEEECC---EEEEEeCCCCCC
Confidence 12111 111111 12334567887663 22 5678899988 55 599999752 899999999875
Q ss_pred CCCCchHHHHHHHHHH
Q 008567 531 RPGRPSALFLGLILAA 546 (561)
Q Consensus 531 ~p~~~~~LF~~Fi~aa 546 (561)
. + .+|++|+++|
T Consensus 178 ~---~-~l~~~f~~~~ 189 (191)
T 2ywd_A 178 D---P-RLHRYFLELA 189 (191)
T ss_dssp C---C-HHHHHHHHHH
T ss_pred C---c-HHHHHHHHHh
Confidence 3 3 8999999876
No 31
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.84 E-value=2.8e-20 Score=178.84 Aligned_cols=183 Identities=15% Similarity=0.220 Sum_probs=115.9
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
+||+|+ ++ .++|.++.++|+.+|+++.+ +.+. +.+.++|||++|||++...
T Consensus 2 m~I~il-~~---~~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVL-GL---QGAVREHIHAIEACGAAGLV------VKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEE-CS---SSCCHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEE-Ec---cCCcHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 589999 55 45678889999999986533 3321 3467899999999985431
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCcccccCce
Q 008567 377 ----VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSR 452 (561)
Q Consensus 377 ----~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrlG~~ 452 (561)
.....+.++.+.++++|+||||+|||+|+.++|+++. ++... . ++...+ ...|.. .+.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~--~~lg~------~--~~~~~~-----~~~g~~--~~~- 115 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDN--PHLGL------L--NVVVER-----NSFGRQ--VDS- 115 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC------CCCCC------S--CEEEEC-----CCSCTT--TSE-
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCC--CcccC------C--ceeEec-----cCCCcc--ccc-
Confidence 1234688888889999999999999999998887641 11100 0 110000 001211 111
Q ss_pred eEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCCCCC
Q 008567 453 RTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRP 532 (561)
Q Consensus 453 ~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~~~p 532 (561)
+..+ +.+..+ +. .+...+.|++.+. .+ +.++.++|.+ |+. +++++.. +++|+|||||+++.
T Consensus 116 ---~~~~-~~~~~~-g~--~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~~-~~a~~~~---~~~gvQfHPE~~~~- 176 (196)
T 2nv0_A 116 ---FEAD-LTIKGL-DE--PFTGVFIRAPHIL-----EA-GENVEVLSEH-NGR-IVAAKQG---QFLGCSFHPELTED- 176 (196)
T ss_dssp ---EEEE-ECCTTC-SS--CEEEEEESCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEET---TEEEESSCTTSSSC-
T ss_pred ---ccCC-cccccC-CC--ceEEEEEecceec-----cc-CCCcEEEEEE-CCE-EEEEEEC---CEEEEEECCccCCc-
Confidence 1111 233332 32 2333445666553 23 5688899987 564 8999873 59999999999765
Q ss_pred CCchHHHHHHHHHHHH
Q 008567 533 GRPSALFLGLILAATK 548 (561)
Q Consensus 533 ~~~~~LF~~Fi~aa~~ 548 (561)
..+|.+|++.+.+
T Consensus 177 ---~~l~~~fl~~~~~ 189 (196)
T 2nv0_A 177 ---HRVTQLFVEMVEE 189 (196)
T ss_dssp ---CHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHh
Confidence 3899999998865
No 32
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.82 E-value=2.7e-20 Score=179.79 Aligned_cols=184 Identities=23% Similarity=0.318 Sum_probs=116.0
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
++|+|+ +|+ . ..+.|+.++|+.+|+++.+ +... +.+.++|||||||| |++.
T Consensus 3 ~~I~ii-d~~-~-~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G~-g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYG-S-GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPGQ-GHFGQ 54 (200)
T ss_dssp CEEEEE-CSS-C-SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECCC-SCHHH
T ss_pred cEEEEE-eCC-C-ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECCC-CcHHH
Confidence 589999 774 1 2357889999999987654 2221 34668999999873 4421
Q ss_pred ----h--hHHHHHHHHHHHcCCCEEEEehhHHHHHHH---hcccccccccCCcCCCCCCCCCceeEecCCCCcccCCccc
Q 008567 377 ----V--GGMILAAKYARENNIPYLGICLGMQISVIE---FARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTM 447 (561)
Q Consensus 377 ----~--~g~i~~ir~a~e~~iPvLGICLGmQLL~ie---~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~m 447 (561)
. ....+.++++.++++|+||||+|||+|+.+ +|+ . ++.. . .+..+.. ++..+.+++||
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~---~~l~--~----~~g~v~~-~~~~~~~~~G~-- 121 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-V---RGLG--L----VPGEVRR-FRAGRVPQMGW-- 121 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-C---CCCC--S----SSSEEEE-CCSSSSSEEEE--
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-c---CCcc--c----cccEEEE-CCCCCCCceeE--
Confidence 1 346788999999999999999999999887 453 2 2111 0 1122222 11002234444
Q ss_pred ccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCC-CCeEEEEEeCCCCcEEEEcccC
Q 008567 448 RLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDET-GKRMEILELPSHPFYVGVQFHP 526 (561)
Q Consensus 448 rlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~d-g~~vE~ie~~~~p~~~GvQFHP 526 (561)
+++.+.+ + +..+.+ . ...+.|+|.+ +. ..+ .+ |.+++ |..++++.+.+ +++|+||||
T Consensus 122 ----~~v~~~~--~-l~~~~~--~--~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHP 179 (200)
T 1ka9_H 122 ----NALEFGG--A-FAPLTG--R--HFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHP 179 (200)
T ss_dssp ----EECEECG--G-GGGGTT--C--EEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS--SEEEESSCT
T ss_pred ----EEEEech--h-hhcCCC--C--CEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCC
Confidence 4666654 4 666642 2 2367899988 42 122 35 77766 62256666654 499999999
Q ss_pred CCCCCCCCchHHH---HHHHHHH
Q 008567 527 EFKSRPGRPSALF---LGLILAA 546 (561)
Q Consensus 527 E~~~~p~~~~~LF---~~Fi~aa 546 (561)
|++. .....|| ++|++.+
T Consensus 180 E~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 180 EKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp TSSH--HHHHHHHHHHHHHC---
T ss_pred CcCc--cchhHHHHHHHHHHhhC
Confidence 9996 3357899 9998753
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.81 E-value=7.5e-20 Score=177.96 Aligned_cols=185 Identities=12% Similarity=0.142 Sum_probs=112.6
Q ss_pred CCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCC
Q 008567 295 KNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGD 374 (561)
Q Consensus 295 ~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~ 374 (561)
..+++|+|+ +|. ..|.++.++|+.+|+++.+ +... +.+.++||||||||+..
T Consensus 18 ~~~~~I~ii-~~~---~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~ 69 (208)
T 2iss_D 18 GSHMKIGVL-GVQ---GDVREHVEALHKLGVETLI------VKLP------------------EQLDMVDGLILPGGEST 69 (208)
T ss_dssp --CCEEEEE-CSS---SCHHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECSSCHH
T ss_pred CCCcEEEEE-ECC---CchHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCcHH
Confidence 455899999 673 2578999999999976533 3321 34678999999998532
Q ss_pred Cc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCccccc
Q 008567 375 RG-----VGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRL 449 (561)
Q Consensus 375 ~~-----~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~~mrl 449 (561)
.. .....+.++++.++++|+||||+|||+|+.++|+.. .++... + +....+ ...|.. .
T Consensus 70 ~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~--~~~lg~--~------~~~v~~-----~~~g~~--~ 132 (208)
T 2iss_D 70 TMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYS--QEKLGV--L------DITVER-----NAYGRQ--V 132 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC-----CCCCCC--E------EEEEET-----TTTCSG--G
T ss_pred HHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCC--CCCccc--c------ceEEEe-----cCCCcc--c
Confidence 11 123467888888899999999999999998888642 111100 0 000000 001211 0
Q ss_pred CceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCC
Q 008567 450 GSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFK 529 (561)
Q Consensus 450 G~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQFHPE~~ 529 (561)
.. +..+ +.+..+.. ..+..++.|++.+ ..+ +.+++++|.+ |+ .+|+++.. + ++|+|||||++
T Consensus 133 --~~--~~~~-~~~~~~~~--~~~~~~~~h~~~v-----~~~-~~~~~v~a~~-d~-~~~a~~~~--~-i~GvQfHPE~~ 194 (208)
T 2iss_D 133 --ES--FETF-VEIPAVGK--DPFRAIFIRAPRI-----VET-GKNVEILATY-DY-DPVLVKEG--N-ILACTFHPELT 194 (208)
T ss_dssp --GC--EEEE-ECCGGGCS--SCEEEEESSCCEE-----EEE-CSSCEEEEEE-TT-EEEEEEET--T-EEEESSCGGGS
T ss_pred --cc--ccCC-cccccCCC--CceEEEEEeCccc-----ccC-CCCcEEEEEE-CC-EEEEEEEC--C-EEEEEeCCCcC
Confidence 01 1112 33333211 1233334455443 223 5678899987 56 49999863 3 99999999998
Q ss_pred CCCCCchHHHHHHHHHH
Q 008567 530 SRPGRPSALFLGLILAA 546 (561)
Q Consensus 530 ~~p~~~~~LF~~Fi~aa 546 (561)
..+ .+|++|+++|
T Consensus 195 ~~~----~l~~~fl~~~ 207 (208)
T 2iss_D 195 DDL----RLHRYFLEMV 207 (208)
T ss_dssp SCC----HHHHHHHTTC
T ss_pred CcH----HHHHHHHHHh
Confidence 653 8999998764
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.78 E-value=1.6e-18 Score=170.60 Aligned_cols=197 Identities=13% Similarity=0.147 Sum_probs=114.1
Q ss_pred ceEEEEEeccCCCcccHHHHHHHHHHc---CceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCC
Q 008567 297 SVRIAMVGKYVGLADSYLSVVKALLHA---CIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFG 373 (561)
Q Consensus 297 ~~~Iavvgky~~~~DaY~Si~~aL~~a---g~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G 373 (561)
+++|+|+ +|. ..+.++.++|+.+ |+.+.. +.+. +.+.++||||||||+.
T Consensus 3 ~~~I~Il-~~~---~~~~~~~~~l~~~~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVL-SLQ---GDFEPHINHFIKLQIPSLNIIQ------VRNV------------------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEE-CTT---SCCHHHHHHHHTTCCTTEEEEE------ECSH------------------HHHHTCSEEEECCSCH
T ss_pred CcEEEEE-eCC---CCcHHHHHHHHHhccCCeEEEE------EcCc------------------cccccCCEEEECCCcH
Confidence 4799999 564 3458889999998 876432 3221 4567899999999974
Q ss_pred CC--c---h--hHHHHHHHHHHHc-CCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCCc
Q 008567 374 DR--G---V--GGMILAAKYAREN-NIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGS 445 (561)
Q Consensus 374 ~~--~---~--~g~i~~ir~a~e~-~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G~ 445 (561)
+. . . .+..+.++.+.+. ++|+||||+|||+|+.++|+.+..-+.....++.. .++...+ ...|.
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~---~~~~~~~-----~~~g~ 126 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGG---LDITICR-----NFYGS 126 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCC---EEEEEEC-----CC---
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCc---eeEEEEe-----cCCCc
Confidence 32 1 1 3467889999999 99999999999999988887541100000011100 0000000 00010
Q ss_pred ccccCc--eeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeC-----CCCeEEEEEeCCCCc
Q 008567 446 TMRLGS--RRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDE-----TGKRMEILELPSHPF 518 (561)
Q Consensus 446 ~mrlG~--~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~-----dg~~vE~ie~~~~p~ 518 (561)
. ... ..+.+ ++.. .+.+. .+..+..|+|.+. .+.+.+++++|.++ ++. +++++.. +
T Consensus 127 ~--~~~~~~~~~~-~~~~---~~~g~--~~~~~~~h~~~v~-----~~~~~~~~vla~~~~~~~g~~~-~~a~~~~---~ 189 (227)
T 2abw_A 127 Q--NDSFICSLNI-ISDS---SAFKK--DLTAACIRAPYIR-----EILSDEVKVLATFSHESYGPNI-IAAVEQN---N 189 (227)
T ss_dssp ---CCEEEEECEE-CCCC---TTCCT--TCEEEEESCCEEE-----EECCTTCEEEEEEEETTTEEEE-EEEEEET---T
T ss_pred c--cccccccccc-cccc---ccCCC--ceeEEEEEcceEe-----ecCCCCcEEEEEcccccCCCCc-eEEEEEC---C
Confidence 0 000 01111 1100 00111 1112334555442 11145788888875 454 8888863 4
Q ss_pred EEEEcccCCCCCCCCCchHHHHHHHHHHHHhh
Q 008567 519 YVGVQFHPEFKSRPGRPSALFLGLILAATKQL 550 (561)
Q Consensus 519 ~~GvQFHPE~~~~p~~~~~LF~~Fi~aa~~~~ 550 (561)
++|+|||||++..+ .+|++|+++|.++.
T Consensus 190 v~gvQfHPE~~~~~----~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 190 CLGTVFHPELLPHT----AFQQYFYEKVKNYK 217 (227)
T ss_dssp EEEESSCGGGSSCC----HHHHHHHHHHHHHH
T ss_pred EEEEEECCeeCCCc----HHHHHHHHHHHhhh
Confidence 99999999998653 89999999986544
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.72 E-value=1.1e-18 Score=193.55 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=119.4
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc-
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG- 376 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~- 376 (561)
++|+|+ +|.. ..+.++.++|+.+|+.+.+ +...+ ...+.++|||||||| |++.
T Consensus 5 ~~I~Ii-d~~~--g~~~~~~~~l~~~G~~~~v------v~~~~----------------~~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVI-DVES--GNLQSLTNAIEHLGYEVQL------VKSPK----------------DFNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEE-CCSC--SCCHHHHHHHHHTTCEEEE------ESSGG----------------GCCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEE-ECCC--CCHHHHHHHHHHCCCEEEE------ECCcc----------------ccccccCCEEEECCC-CchHh
Confidence 689999 7841 1247899999999987654 33211 012678999999984 3321
Q ss_pred ------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHh--cccccccccCCcCCCCCCCCCceeEecC-CCCcccCCccc
Q 008567 377 ------VGGMILAAKYARENNIPYLGICLGMQISVIEF--ARSVLGLKRANSNEFDSETPNPVVIFMP-EGSRTHMGSTM 447 (561)
Q Consensus 377 ------~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~--g~~v~gl~da~s~Ef~~~~~~~vi~lm~-~~~~~~~G~~m 447 (561)
..+..++++.+.+.++|+||||+|||+|+.++ |+...++ .. ....+..+-. ..+.+|+||+
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~L---g~------lgg~v~~~~~~~~~~~~~G~~- 128 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGL---NY------IDFKLSRFDDSEKPVPEIGWN- 128 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCC---CS------EEEEEEECCTTTSCSSEEEEE-
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCcccc---CC------CCcEEEECCcCCCCCccccce-
Confidence 12357788888899999999999999998876 1111111 00 0111211100 0124555664
Q ss_pred ccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccc---cccCCeEEEEEeCCC--CeEEEEEeCCCCcEEEE
Q 008567 448 RLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGV---LEEAGLKFVGKDETG--KRMEILELPSHPFYVGV 522 (561)
Q Consensus 448 rlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~---le~~gl~v~a~~~dg--~~vE~ie~~~~p~~~Gv 522 (561)
++.+. ++++..+.. ...+ ++.|+|.+... .. +-+.++.++|.++.+ ..+++++. . +++|+
T Consensus 129 -----~v~~~--~~L~~~l~~-~~~~--~~vHS~~~~~i--~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~-~i~Gv 193 (555)
T 1jvn_A 129 -----SCIPS--ENLFFGLDP-YKRY--YFVHSFAAILN--SEKKKNLENDGWKIAKAKYGSEEFIAAVNK--N-NIFAT 193 (555)
T ss_dssp -----CCCCC--TTCCTTCCT-TSCE--EEEESEECBCC--HHHHHHHHHTTCEEEEEEETTEEEEEEEEE--T-TEEEE
T ss_pred -----EEEEc--CHHHhhCCC-CceE--EEEEEEEEEec--ccccccCCCCCEEEEEEcCCCCCeEEEEEe--C-CEEEE
Confidence 33333 356655532 2222 46788887532 11 003456677777632 25999993 3 49999
Q ss_pred cccCCCCCCCCCchHHHHHHHHHH
Q 008567 523 QFHPEFKSRPGRPSALFLGLILAA 546 (561)
Q Consensus 523 QFHPE~~~~p~~~~~LF~~Fi~aa 546 (561)
|||||+++ .....||.+|+++.
T Consensus 194 QFHPE~s~--~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 194 QFHPEKSG--KAGLNVIENFLKQQ 215 (555)
T ss_dssp SSBGGGSH--HHHHHHHHHHHTTC
T ss_pred EeCcEecC--hhHHHHHHHHHhcc
Confidence 99999863 22468999999874
No 36
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.53 E-value=1.4e-13 Score=141.78 Aligned_cols=196 Identities=12% Similarity=0.126 Sum_probs=115.1
Q ss_pred CceEEEEEeccCCCcccHH-HHHHHHHHcCceeeeeeeeEeecCCCccccccc-CCCcchhhHHHh--ccCCCeEEEcCC
Q 008567 296 NSVRIAMVGKYVGLADSYL-SVVKALLHACIACSLKPSIDWIAASDLEDESAK-LTPKDHAAAWET--LRNAECVLVPGG 371 (561)
Q Consensus 296 ~~~~Iavvgky~~~~DaY~-Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~-~d~~~~~~~~~~--l~~~DGIilpGG 371 (561)
+++||||+ .....+..|. .+.+.|...+..+.+ .++...+-+..+.. ....+|...++. ..++||+||+||
T Consensus 46 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~v----~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGs 120 (312)
T 2h2w_A 46 RPLEILIL-NLMPDKIKTEIQLLRLLGNTPLQVNV----TLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGA 120 (312)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHHSSSSCEEE----EEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEEE----EEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCC
Confidence 45899999 6644333333 356666655554433 34443321110000 000000001122 367999999999
Q ss_pred CCC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCCcccCC
Q 008567 372 FGD-------RGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMG 444 (561)
Q Consensus 372 ~G~-------~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~G 444 (561)
+-. +-+..+.+.+++++++++|+||||+|+|+++.+++|-.- . . ++
T Consensus 121 P~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k-~-----------------~-~~-------- 173 (312)
T 2h2w_A 121 PVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPK-Y-----------------E-LP-------- 173 (312)
T ss_dssp SCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCC-E-----------------E-EE--------
T ss_pred CCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCcc-c-----------------c-CC--------
Confidence 842 235778889999999999999999999997677665210 0 0 00
Q ss_pred cccccCceeEEEcCCCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcc
Q 008567 445 STMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQF 524 (561)
Q Consensus 445 ~~mrlG~~~v~l~~~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~GvQF 524 (561)
...+|..+..+.+.++++..+ + ..+...|.|.-++..+.+... .|++++|.|+... +.++..++.. ++++||
T Consensus 174 -~K~~Gv~~~~~~~~~pL~~g~-~--~~f~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~~~~~~~-~~~vQg 245 (312)
T 2h2w_A 174 -QKLSGVYKHRVAKDSVLFRGH-D--DFFWAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVVANKSER-QIFVTG 245 (312)
T ss_dssp -EEEEEEEEEEESSCCGGGTTC-C--SEEEEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEEECSSSS-EEEECS
T ss_pred -CCEEEEEEEEEcCCCccccCC-C--CceEeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEEEecCCC-EEEEEC
Confidence 011344566665554555443 2 233334543334433444432 4899999998776 9999997765 899999
Q ss_pred cCCCCCC
Q 008567 525 HPEFKSR 531 (561)
Q Consensus 525 HPE~~~~ 531 (561)
|||++..
T Consensus 246 HPEyd~~ 252 (312)
T 2h2w_A 246 HPEYDRY 252 (312)
T ss_dssp CTTCCTT
T ss_pred CCCCCHH
Confidence 9999876
No 37
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.50 E-value=2.7e-13 Score=139.19 Aligned_cols=196 Identities=11% Similarity=0.101 Sum_probs=114.2
Q ss_pred CceEEEEEeccCCCcccHH-HHHHHHHHcCceeeeeeeeEeecCCCccccccc-CCCcc-hhhHHH-hccCCCeEEEcCC
Q 008567 296 NSVRIAMVGKYVGLADSYL-SVVKALLHACIACSLKPSIDWIAASDLEDESAK-LTPKD-HAAAWE-TLRNAECVLVPGG 371 (561)
Q Consensus 296 ~~~~Iavvgky~~~~DaY~-Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~-~d~~~-~~~~~~-~l~~~DGIilpGG 371 (561)
+++||||+ .....+..|. .+.+.|...+..+. +.++...+-+..+.. ....+ |....+ ...++||+||+||
T Consensus 34 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~----v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGa 108 (301)
T 2vdj_A 34 RALKIAIL-NLMPTKQETEAQLLRLIGNTPLQLD----VHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGA 108 (301)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHTCSSSCEE----EEEECCCC------------CCEECHHHHTTSCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEE----EEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCC
Confidence 45899999 6643333333 35555555554433 334443321110000 00001 111112 2468999999999
Q ss_pred CCC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccc-cccccCCcCCCCCCCCCceeEecCCCCcccC
Q 008567 372 FGD-------RGVGGMILAAKYARENNIPYLGICLGMQISVIEFARSV-LGLKRANSNEFDSETPNPVVIFMPEGSRTHM 443 (561)
Q Consensus 372 ~G~-------~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g~~v-~gl~da~s~Ef~~~~~~~vi~lm~~~~~~~~ 443 (561)
+-. +-+..+.+.+++++++++|+||||+|+|+++.+++|-. ... +
T Consensus 109 p~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~--------------------~------- 161 (301)
T 2vdj_A 109 PVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPL--------------------K------- 161 (301)
T ss_dssp TTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE--------------------E-------
T ss_pred CCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccC--------------------C-------
Confidence 842 23577888999999999999999999999766666521 100 0
Q ss_pred CcccccCceeEEEcC-CCcccccccCCceeEEeeeeeeeeeCcccccccccCCeEEEEEeCCCCeEEEEEeCCCCcEEEE
Q 008567 444 GSTMRLGSRRTLFQT-PDCVTSKLYRNAEYVDERHRHRYEVNPEAIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGV 522 (561)
Q Consensus 444 G~~mrlG~~~v~l~~-~~s~l~~iyg~~~~I~~~h~HrY~vn~~~v~~le~~gl~v~a~~~dg~~vE~ie~~~~p~~~Gv 522 (561)
...+|..+..+.. .++++.... ..+..-|.|.-++..+.+..+ .|++++|.|+... +.++..++.. ++++
T Consensus 162 --~K~~Gv~~~~~~~~~~pL~~g~~---~~f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~~~~~~~~-~~~v 232 (301)
T 2vdj_A 162 --EKMFGVFEHEVREQHVKLLQGFD---ELFFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHLVIGQEGR-QVFA 232 (301)
T ss_dssp --EEEEEEEEEEECCSSCGGGTTCC---SEEEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEEEEEGGGT-EEEE
T ss_pred --CCEEEEEEEEecCCCCccccCCC---CceEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceEEEecCCC-EEEE
Confidence 0012334555433 335554432 233334544334444555554 3999999998776 9999997655 8999
Q ss_pred cccCCCCCCC
Q 008567 523 QFHPEFKSRP 532 (561)
Q Consensus 523 QFHPE~~~~p 532 (561)
|||||++...
T Consensus 233 QgHpEyd~~~ 242 (301)
T 2vdj_A 233 LGHSEYSCDT 242 (301)
T ss_dssp CSCTTCCTTH
T ss_pred ECCCCCCHHH
Confidence 9999998763
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.16 E-value=1.6e-10 Score=137.87 Aligned_cols=194 Identities=17% Similarity=0.160 Sum_probs=113.8
Q ss_pred CceEEEEEecc-CCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCC
Q 008567 296 NSVRIAMVGKY-VGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGD 374 (561)
Q Consensus 296 ~~~~Iavvgky-~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~ 374 (561)
.++||+|+ +| +...| .++.+||+.+|+.+.+ .|+. ++.. ++ +.|.++|+|++||||..
T Consensus 1046 ~~pkVaIi-~~~G~N~~--~~~~~A~~~aG~~~~~----v~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSy 1104 (1303)
T 3ugj_A 1046 ARPKVAVL-REQGVNSH--VEMAAAFHRAGFDAID----VHMS--DLLG-----GR-------IGLGNFHALVACGGFSY 1104 (1303)
T ss_dssp CCCEEEEE-ECTTCCCH--HHHHHHHHHTTCEEEE----EEHH--HHHT-----TS-------CCGGGCSEEEECCSCGG
T ss_pred CCCEEEEE-ecCCcCCH--HHHHHHHHHhCCceEE----Eeec--cccc-----Cc-------ccHhhCCEEEECCCCcc
Confidence 35799999 77 33332 7899999999998653 2332 0100 00 45788999999999743
Q ss_pred Cc-------h-------hHHHHHHHHHH-HcCCCEEEEehhHHHHHHHhcccccccccCCcCCCCCCCCCceeEecCCCC
Q 008567 375 RG-------V-------GGMILAAKYAR-ENNIPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGS 439 (561)
Q Consensus 375 ~~-------~-------~g~i~~ir~a~-e~~iPvLGICLGmQLL~ie~g~~v~gl~da~s~Ef~~~~~~~vi~lm~~~~ 439 (561)
.. + ..+.++++.+. +.++|+||||+|||+| .+..+ + ++.+.. .| .++.+..
T Consensus 1105 gD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL-~e~~g-l--lPg~~~--------~p--~l~~N~s 1170 (1303)
T 3ugj_A 1105 GDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMM-SNLRE-L--IPGSEL--------WP--RFVRNHS 1170 (1303)
T ss_dssp GGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHH-HTTGG-G--STTCTT--------CC--EEECCTT
T ss_pred hhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHH-HHhcC-c--CCCCCC--------CC--eEecCCC
Confidence 11 0 23455666644 5789999999999999 44321 2 222210 11 2222111
Q ss_pred cccCCcccccCce--eEEEcCCCccccccc-CCceeEEeeeee-eeeeC-cccccccccCCeEEEEE-------------
Q 008567 440 RTHMGSTMRLGSR--RTLFQTPDCVTSKLY-RNAEYVDERHRH-RYEVN-PEAIGVLEEAGLKFVGK------------- 501 (561)
Q Consensus 440 ~~~~G~~mrlG~~--~v~l~~~~s~l~~iy-g~~~~I~~~h~H-rY~vn-~~~v~~le~~gl~v~a~------------- 501 (561)
+ |+=.+ .+++..+.|.+.+-+ |..-.++..|.. ||.+. ++.++.|+.+|..+.-+
T Consensus 1171 -----~--~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~ 1243 (1303)
T 3ugj_A 1171 -----D--RFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPA 1243 (1303)
T ss_dssp -----S--SCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTT
T ss_pred -----C--CeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCC
Confidence 0 11111 233444434443333 322345556654 45454 35566676777665554
Q ss_pred eCCCC--eEEEEEeCCCCcEEEEcccCCCCCCC
Q 008567 502 DETGK--RMEILELPSHPFYVGVQFHPEFKSRP 532 (561)
Q Consensus 502 ~~dg~--~vE~ie~~~~p~~~GvQFHPE~~~~p 532 (561)
|+||. -|++|..++.. ++|...|||+...+
T Consensus 1244 NPNGS~~~IaGi~s~~Gr-vlg~MpHPEr~~~~ 1275 (1303)
T 3ugj_A 1244 NPNGSPNGITAVTTENGR-VTIMMPHPERVFRT 1275 (1303)
T ss_dssp SSSCCGGGEEEEECTTSS-EEEESSBGGGSSBG
T ss_pred CCCCChhhceEeECCCCC-EEEEcCChHHcccc
Confidence 46665 38899988876 99999999997653
No 39
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=98.67 E-value=3e-08 Score=97.67 Aligned_cols=190 Identities=12% Similarity=0.141 Sum_probs=112.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcc-cccCC-----c-c
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE-VDLDL-----G-N 73 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E-~dldl-----g-~ 73 (561)
||-|||| |+-||.||.++++.|++.|+++|++|..+|- .++|-.+ .+||-. .|.-+ . .
T Consensus 4 mk~i~It-gt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP-------------v~~g~~~-~~~~~~~~D~~~~~~~~~~~ 68 (228)
T 3of5_A 4 MKKFFII-GTDTEVGKTYISTKLIEVCEHQNIKSLCLKP-------------VASGQSQ-FSELCEDVESILNAYKHKFT 68 (228)
T ss_dssp CEEEEEE-ESSSSSCHHHHHHHHHHHHHHTTCCEEEECS-------------EEESBCS-SSSSBHHHHHHHHHTTTSSC
T ss_pred CcEEEEE-eCCCCCCHHHHHHHHHHHHHHCCCeeEEecc-------------eeecCcc-CCCCCChHHHHHHhcCCCCC
Confidence 6899999 9999999999999999999999999999883 2333221 112210 12111 0 1
Q ss_pred cccccCCCCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHH-hhccCCCCCCCCCCEEEEecCCccc
Q 008567 74 YERFLDVRLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIES-VAVIPVDGKEGPADVCVIELGGTVG 152 (561)
Q Consensus 74 yerf~~~~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~-~~~~~~~~~~~~~d~~i~E~gGtvg 152 (561)
|+.+++..++...+ --+..++.| ++ --.+.|++.+++ ++ .++|++|||+.|.+.
T Consensus 69 ~~~~~~~~~~~p~s--------p~~aa~~~~----~~-----i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~ 123 (228)
T 3of5_A 69 AAEINLISFNQAVA--------PHIIAAKTK----VD-----ISIENLKQFIEDKYN--------QDLDILFIEGAGGLL 123 (228)
T ss_dssp HHHHCSEEESSSSC--------HHHHHHHTT----CC-----CCHHHHHHHHHGGGG--------SSCSEEEEEEEEETT
T ss_pred hhhEEEEEECCCCC--------HHHHHHHcC----CC-----CCHHHHHHHHHHHHH--------ccCCEEEEECCCccc
Confidence 33344433333111 111112222 21 136889999998 76 689999999988764
Q ss_pred cc--cccHHHHHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEE-ee--cCCCCchhh
Q 008567 153 DI--ESMPFIEALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLAC-RS--AQPLLENTK 227 (561)
Q Consensus 153 di--e~~~f~ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~-R~--~~~l~~~~~ 227 (561)
+= +..-.++.++++... ++.| .. .+-..-.-+..+++.|+..|+...++|+ |- +.......+
T Consensus 124 ~p~~~~~~~adla~~l~~p-----viLV-------~~-~~~~~i~~~~~~~~~l~~~~~~i~GvIlN~~~~~~~~~~~~~ 190 (228)
T 3of5_A 124 TPYSDHTTQLDLIKALQIP-----VLLV-------SA-IKVGCINHTLLTINELNRHNIKLAGWIANCNDSNIKYIDEQI 190 (228)
T ss_dssp CBSSSSCBHHHHHHHHTCC-----EEEE-------EE-CSTTHHHHHHHHHHHHHHTTCCEEEEEEEECCTTCSCHHHHH
T ss_pred cccccchhHHHHHHHcCCC-----EEEE-------Ec-CCcchHHHHHHHHHHHHhCCCcEEEEEEECcCCcchhhHHHH
Confidence 41 233345555555321 2221 21 1111112244566777889999888886 32 222334556
Q ss_pred hcccccCCCCCCCeee
Q 008567 228 EKLSQFCHVPIGNILN 243 (561)
Q Consensus 228 ~kisl~~~v~~~~Vi~ 243 (561)
+.+...+.++.-++++
T Consensus 191 ~~l~~~~g~pvLG~iP 206 (228)
T 3of5_A 191 NTIEELSGYKCSAKIS 206 (228)
T ss_dssp HHHHHHHSCCCSEEEE
T ss_pred HHHHHhhCCCEEEECC
Confidence 6677677888888877
No 40
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=98.62 E-value=1.2e-07 Score=94.21 Aligned_cols=162 Identities=12% Similarity=0.087 Sum_probs=98.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCccc----cc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~y----er 76 (561)
+|.|||| |+-+|+||.++++.|++.|+++|++|..+|- -.|.+... +| .|-|.... ++
T Consensus 21 ~k~i~It-gT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP--------v~~g~~~~-------~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFIS-ATNTNAGKTTCARLLAQYCNACGVKTILLKP--------IETGVNDA-------IN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEE-ESSTTSSHHHHHHHHHHHHHHTTCCEEEECC--------EECSCCTT-------TC--CCSHHHHHHHHHHT
T ss_pred CcEEEEE-eCCCCCcHHHHHHHHHHHHHhCCCceEEEee--------eecCCccc-------CC--CCchHHHHHHHHHH
Confidence 5889999 9999999999999999999999999999994 22222110 11 12222223 33
Q ss_pred c---------cCCCCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEec
Q 008567 77 F---------LDVRLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIEL 147 (561)
Q Consensus 77 f---------~~~~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~ 147 (561)
+ .++.++.- ..--+..++.|.+ +.+ -.++|++.+++++ .++|++|||+
T Consensus 83 ~~~g~~~~~~~p~~~~~p--------~sp~~aa~~~g~~--~~i-----~~~~I~~~~~~l~--------~~~D~vlIEG 139 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKV--------SAPLIAQQEEDPN--API-----DTDNLTQRLHNFT--------KTYDLVIVEG 139 (242)
T ss_dssp TCTTCCHHHHCCEECSSS--------SCHHHHHHHHCTT--CCC-----CHHHHHHHHHHGG--------GTCSEEEEEC
T ss_pred HhCCCChHHeeeEEECCC--------CChHHHHHHcCCC--CcC-----CHHHHHHHHHHHH--------hcCCEEEEEC
Confidence 3 33332211 1112223344432 111 3688999999987 5899999999
Q ss_pred CCccccc--cccHHHHHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEEe
Q 008567 148 GGTVGDI--ESMPFIEALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLACR 217 (561)
Q Consensus 148 gGtvgdi--e~~~f~ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~R 217 (561)
.|.+.+. +..-.++.++++... + +++.. .+----.-+.-+++.|+..|+. .++|+-
T Consensus 140 agGl~~pl~~~~~~adlA~~l~~p-----V-------ILV~~-~~lg~i~~~~lt~~~l~~~g~~-~GvIlN 197 (242)
T 3qxc_A 140 AGGLCVPITLEENMLDFALKLKAK-----M-------LLISH-DNLGLINDCLLNDFLLKSHQLD-YKIAIN 197 (242)
T ss_dssp CSCTTCBSSSSCBHHHHHHHHTCE-----E-------EEEEC-CSTTHHHHHHHHHHHHHTSSSC-EEEEEC
T ss_pred CCCccccccccchHHHHHHHcCCC-----E-------EEEEc-CCCcHHHHHHHHHHHHHhCCCC-EEEEEe
Confidence 9988652 334445666666432 1 22222 1111111345566778889999 888873
No 41
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.42 E-value=1.9e-07 Score=90.77 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=64.4
Q ss_pred ceEEEEEeccCCC---cccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCC
Q 008567 297 SVRIAMVGKYVGL---ADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGF 372 (561)
Q Consensus 297 ~~~Iavvgky~~~---~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~ 372 (561)
..+|++| .|..- .|.| .|+.++|++.|+++.+ ++-.+- + .++..+.+.++|+|++|||-
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~~-------~---~~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEE------LDIATE-------S---LGEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTTS-------C---HHHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecCC-------C---hHHHHHHHHhCCEEEECCCC
Confidence 4799999 78433 2334 5899999999997543 221000 0 11223568899999999963
Q ss_pred CCC-----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 373 GDR-----GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 373 G~~-----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
-.. ...++.++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 222 125778899999999999999999999994
No 42
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=98.41 E-value=9.5e-07 Score=88.29 Aligned_cols=165 Identities=18% Similarity=0.192 Sum_probs=95.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||-|||| |+-||+||.++++.|++.|+++|++|..+|- .+.|- ..|+ -|....++..++
T Consensus 26 m~~i~It-gt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP-------------v~~g~---~~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVT-GTGTGVGKTVVCAALASAARQAGIDVAVCKP-------------VQTGT---ARGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEE-ESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE-------------EECCG---GGTC----CHHHHHHHHHCC
T ss_pred CCEEEEE-eCCCCCcHHHHHHHHHHHHHHCCCeEEEEee-------------eecCC---CCCC----HHHHHHHHHcCC
Confidence 6889999 9999999999999999999999999999994 11111 0121 222333333332
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccc--cc-c
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDI--ES-M 157 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdi--e~-~ 157 (561)
... .+-++--....--+..++.|.. . + -.+.|++.+.+++ .++|++|||+.|.+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~---~---~--~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA---L---P--ARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC---C---C--CHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC---C---C--CHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 211 0101111111111222223321 1 1 2578899999886 68999999999987542 22 3
Q ss_pred HHHHHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHhCCCcccEEEE
Q 008567 158 PFIEALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHLLAC 216 (561)
Q Consensus 158 ~f~ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s~Gi~pd~iI~ 216 (561)
-.++-++++... ++ ++.. .+.-.-.-+.-+++.|+..|+...++|+
T Consensus 148 ~~adla~~l~~p-----VI-------LV~~-~~~g~i~~~~lt~~~l~~~g~~i~GvIl 193 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----AL-------VVVT-ADLGTLNHTKLTLEALAAQQVSCAGLVI 193 (251)
T ss_dssp EHHHHHHHTTCE-----EE-------EEEC-SSTTHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHcCCC-----EE-------EEEc-CCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 445555555432 11 2222 1111111244566778889999999996
No 43
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.37 E-value=1.9e-07 Score=92.01 Aligned_cols=88 Identities=16% Similarity=0.234 Sum_probs=62.4
Q ss_pred ceEEEEEeccCC---CcccH-HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCC
Q 008567 297 SVRIAMVGKYVG---LADSY-LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGF 372 (561)
Q Consensus 297 ~~~Iavvgky~~---~~DaY-~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~ 372 (561)
..+|++| +|.. -.|.| .|+.++|+..|+++.. +...+ +..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~~~--------------d~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHRVA--------------DPLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTSSS--------------CHHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eeccc--------------cHHHHHhcCCEEEECCCc
Confidence 4799999 7853 12233 5789999999986543 21100 122668899999999963
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 373 GDRG-----VGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 373 G~~~-----~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
-..- ..++.++++++.++++|++|||.|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 2221 24678889988889999999999999984
No 44
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.20 E-value=2.5e-06 Score=98.77 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHC-----CCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKAC-----GLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~-----g~~v~~~K~ 39 (561)
+|-|||+ |+-||+||.++++.||++|+++ |++|.+||-
T Consensus 34 ~~~l~I~-gt~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fKP 76 (831)
T 4a0g_A 34 HPTYLIW-SANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLKP 76 (831)
T ss_dssp SCEEEEE-ESSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEEE
T ss_pred cccEEEE-ECCCCCCHHHHHHHHHHHHHhcccccCCceEEEEcc
Confidence 4679999 9999999999999999999999 999999995
No 45
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.80 E-value=7.1e-05 Score=71.19 Aligned_cols=99 Identities=18% Similarity=0.287 Sum_probs=64.2
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCCC---cccc----cccCCCcchhhHHHh--ccCCCeE
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAASD---LEDE----SAKLTPKDHAAAWET--LRNAECV 366 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~~---l~~~----~~~~d~~~~~~~~~~--l~~~DGI 366 (561)
..||+|+ -+.++.+ .+....+.|+.+|+++.+ +.+.. +... ....+. . .+. ..++|+|
T Consensus 23 ~~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~v~~~~g~~~v~~~~-~----l~~~~~~~~D~l 90 (193)
T 1oi4_A 23 SKKIAVL-ITDEFEDSEFTSPADEFRKAGHEVIT------IEKQAGKTVKGKKGEASVTIDK-S----IDEVTPAEFDAL 90 (193)
T ss_dssp CCEEEEE-CCTTBCTHHHHHHHHHHHHTTCEEEE------EESSTTCEEECTTSSCEEECCE-E----GGGCCGGGCSEE
T ss_pred CCEEEEE-ECCCCCHHHHHHHHHHHHHCCCEEEE------EECCCCcceecCCCCeEEECCC-C----hHHCCcccCCEE
Confidence 4689999 6655543 245678899999977654 22111 1100 000000 0 122 3578999
Q ss_pred EEcCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 367 LVPGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 367 ilpGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
|||||++.. ......+.++.+.++++|+.|||.|.|+|+-+
T Consensus 91 ivpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 91 LLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp EECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred EECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 999997642 23567889999999999999999999999654
No 46
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=97.45 E-value=0.00044 Score=64.90 Aligned_cols=89 Identities=16% Similarity=0.253 Sum_probs=66.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
||.|.|+ +.-.|.||..+|..|+..|..+|++|..+..||.-|. +. |+..
T Consensus 1 M~vi~v~-s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~-----~~------------------------~~~~ 50 (206)
T 4dzz_A 1 MKVISFL-NPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSL-----TN------------------------WSKA 50 (206)
T ss_dssp CEEEEEC-CSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHH-----HH------------------------HHTT
T ss_pred CeEEEEE-eCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCH-----HH------------------------HHhc
Confidence 7899999 6789999999999999999999999999999864221 10 1000
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCcccc
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGD 153 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgd 153 (561)
. .. ...++|--.+.+.+.+..+. ..+|+|||+.++..++
T Consensus 51 ~---------------------~~-----~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~ 89 (206)
T 4dzz_A 51 G---------------------KA-----AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV 89 (206)
T ss_dssp S---------------------CC-----SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH
T ss_pred C---------------------CC-----CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH
Confidence 0 00 03455544578888888886 5799999999998744
No 47
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.36 E-value=0.00052 Score=63.23 Aligned_cols=100 Identities=14% Similarity=0.269 Sum_probs=62.6
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCCC--cccc-cccCCCcchhhHHHhc--cCCCeEEEcC
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAASD--LEDE-SAKLTPKDHAAAWETL--RNAECVLVPG 370 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~~--l~~~-~~~~d~~~~~~~~~~l--~~~DGIilpG 370 (561)
.+||+|+ -+.++.+ .+....+.|+.+|+++.+ +.++. +... ...-.+ +...+.+ .++|+|++||
T Consensus 2 ~~ki~il-~~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~v~~~~g~~i~~---~~~~~~~~~~~~D~livpG 71 (168)
T 3l18_A 2 SMKVLFL-SADGFEDLELIYPLHRIKEEGHEVYV------ASFQRGKITGKHGYSVNV---DLTFEEVDPDEFDALVLPG 71 (168)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE------EESSSEEEECTTSCEEEE---CEEGGGCCGGGCSEEEECC
T ss_pred CcEEEEE-eCCCccHHHHHHHHHHHHHCCCEEEE------EECCCCEEecCCCcEEec---cCChhHCCHhhCCEEEECC
Confidence 3688888 5655442 234578889999877644 22211 1000 000000 0001222 3699999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 371 GFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 371 G~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
|++.. ..+...+.++.+.++++|+.+||-|.++|+-
T Consensus 72 G~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 72 GKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILIS 110 (168)
T ss_dssp BSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHH
Confidence 98642 2356788899999999999999999999954
No 48
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=97.23 E-value=0.00079 Score=70.22 Aligned_cols=38 Identities=24% Similarity=0.159 Sum_probs=35.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
+|-|||+ |+-.++||+.++..|.+.|+++|++|..++.
T Consensus 169 ~~ri~v~-GTDt~vGKt~t~~~L~~~l~~~G~~v~~v~t 206 (350)
T 2g0t_A 169 IKVVGVF-GTDCVVGKRTTAVQLWERALEKGIKAGFLAT 206 (350)
T ss_dssp SEEEEEE-ESSSSSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ceEEEEe-cCCCCccCccHHHHHHHHHHhcCCeEEEEcc
Confidence 4679999 7888899999999999999999999999888
No 49
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=97.04 E-value=0.0019 Score=61.53 Aligned_cols=38 Identities=32% Similarity=0.427 Sum_probs=34.6
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
+|-|+|+ +.-.|.||..+|+.|+..|+++|+||..+ ||
T Consensus 1 ~k~I~v~-s~kgGvGKTt~a~nLa~~la~~G~rVll~--dp 38 (224)
T 1byi_A 1 SKRYFVT-GTDTEVGKTVASCALLQAAKAAGYRTAGY--KP 38 (224)
T ss_dssp CEEEEEE-ESSTTSCHHHHHHHHHHHHHHTTCCEEEE--CS
T ss_pred CceEEEE-ECCCCCCHHHHHHHHHHHHHHCCCCEEEE--cc
Confidence 5889999 78899999999999999999999999984 55
No 50
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=96.98 E-value=0.003 Score=61.84 Aligned_cols=41 Identities=27% Similarity=0.370 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+|++|..+..||.
T Consensus 2 ~~~I~v~-s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVA-SGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEE-ESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEE-CCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4889999 5678999999999999999999999999999984
No 51
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=96.93 E-value=0.0016 Score=66.18 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=37.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
+|.|+|| |.-.|.||..+|+.|+..|...|.+|..+..||
T Consensus 104 ~kvI~vt-s~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMIT-GATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEE-ESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEE-CCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4789999 788999999999999999999999999999987
No 52
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=96.90 E-value=0.0039 Score=60.57 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+|++|..+..||
T Consensus 2 ~~vi~v~-s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVT-SGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEE-CSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEE-CCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4889999 678999999999999999999999999999998
No 53
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=96.81 E-value=0.0097 Score=58.58 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=38.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+|++|..+..||.-
T Consensus 18 ~~vI~v~-s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVM-SGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEE-CSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEE-cCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4678898 66789999999999999999999999999999975
No 54
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.74 E-value=0.0049 Score=57.79 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=61.6
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCC--Cccc------cc--ccCCCcchhhHHHhc--cCC
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAAS--DLED------ES--AKLTPKDHAAAWETL--RNA 363 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~--~l~~------~~--~~~d~~~~~~~~~~l--~~~ 363 (561)
..||+|+ -+.++.+ .+....+.|+.+++++.+ +.+. .+.. .. ...+. . .+.+ .++
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~v~~~~~~~~~g~~v~~~~-~----~~~~~~~~~ 76 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTEL------ISLEPGEIQSMKGDIEPQEKYRVDH-V----VSEVQVSDY 76 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEE------EESSSSEEEEEETTTEEEEEEECSE-E----GGGCCGGGC
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEE------EecCCCccccccccccCCcEEeCCC-C----hhhCChhhC
Confidence 4689999 5655542 234567889999877643 2211 1100 00 00000 1 1222 578
Q ss_pred CeEEEcCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 364 ECVLVPGGFGD----RGVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 364 DGIilpGG~G~----~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
|+||||||++. +..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 77 D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 77 DGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp SEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred CEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 99999999742 23466888999999999999999999999864
No 55
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=96.64 E-value=0.0021 Score=60.31 Aligned_cols=44 Identities=20% Similarity=0.089 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc-ccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY-LNTD 46 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy-ln~d 46 (561)
|+.|.|+| .||.||..++..|.+.|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 56788995 78999999999999999999999999999986 5555
No 56
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=96.56 E-value=0.0043 Score=58.71 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=62.1
Q ss_pred eEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCC---Ccccc-cccCCCcchhhHHHhc---cCCCeEEEc
Q 008567 298 VRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAAS---DLEDE-SAKLTPKDHAAAWETL---RNAECVLVP 369 (561)
Q Consensus 298 ~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~---~l~~~-~~~~d~~~~~~~~~~l---~~~DGIilp 369 (561)
.||+|+ -+.++.+ .+....+.|+.+|+++.+ +.+. .+... ...-.+. ...+.+ .++|.|++|
T Consensus 4 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~v~~~~g~~v~~d---~~l~~~~~~~~~D~livp 73 (197)
T 2rk3_A 4 KRALVI-LAKGAEEMETVIPVDVMRRAGIKVTV------AGLAGKDPVQCSRDVVICPD---ASLEDAKKEGPYDVVVLP 73 (197)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EETTCSSCEECTTSCEECCS---EEHHHHHTTCCCSEEEEC
T ss_pred CEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCCccccCCCCEEeCC---cCHHHcCCccCCCEEEEC
Confidence 478888 5655443 124577889999976644 2211 11110 0000010 011334 689999999
Q ss_pred CCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 370 GGFGDR----GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 370 GG~G~~----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
||.+.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 74 GG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 74 GGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 997432 2356788999999999999999999999864
No 57
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=96.52 E-value=0.011 Score=59.12 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=37.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
|.|.|+ +.-.|+||..+|+.|+..|..+|++|..+..||+
T Consensus 5 kvI~v~-s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVG-NEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEEC-CSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEE-cCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 678888 6789999999999999999999999999999984
No 58
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=96.49 E-value=0.0072 Score=61.00 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=38.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
.|.|+|| +.-.|.||..+|+.|+..|...|.+|..+-.||.
T Consensus 92 ~kvI~vt-s~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMT-GVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEE-ESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEE-CCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 3789999 8889999999999999999999999999999985
No 59
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=96.44 E-value=0.012 Score=58.66 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+|.|+|| +...|.||..+|+.|+..|...|.+|..+-.||.
T Consensus 82 ~kvI~vt-s~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 82 VQSIVIT-SEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCEEEEE-CSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEE-CCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4789999 7888999999999999999999999999999863
No 60
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=96.43 E-value=0.0067 Score=63.19 Aligned_cols=169 Identities=18% Similarity=0.129 Sum_probs=98.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCCcccccCCcccccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG~E~dldlg~yerf~~~ 80 (561)
+|-|||+ |+=+++||-.++..|.+.|+++|+++..+|. | |-|.. +...|-.. |-
T Consensus 152 ~k~i~v~-GTD~~VGK~~ts~~L~~~l~~~G~~a~~~~t--------g-----qtg~~-~~~~gi~~--Da--------- 205 (349)
T 2obn_A 152 CRRVLTV-GTDMAIGKMSTSLELHWAAKLRGWRSKFLAT--------G-----QTGVM-LEGDGVAL--DA--------- 205 (349)
T ss_dssp SEEEEEE-ESSSSSSHHHHHHHHHHHHHHTTCCEEEECC--------S-----HHHHH-HHSCSCCG--GG---------
T ss_pred ceEEEEc-CCCccccceeHHHHHHHHHHhcCCcEEEEec--------c-----chhhh-hhcCCcch--hH---------
Confidence 3679999 8899999999999999999999999999776 3 11110 01111111 10
Q ss_pred CCCCCCcccccchhhHHhhhhhcCCCCCCeeEEecccHHHHHHHHHHhhccCCCCCCCCCCEEEEecCCccccccccHHH
Q 008567 81 RLTKNNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKNWIESVAVIPVDGKEGPADVCVIELGGTVGDIESMPFI 160 (561)
Q Consensus 81 ~l~~~~~~tsGk~y~~vi~~er~g~y~g~tvq~iph~~~~i~~~i~~~~~~~~~~~~~~~d~~i~E~gGtvgdie~~~f~ 160 (561)
+......| ++.+.+.++. +++|+++||+.|.+--=-+-..+
T Consensus 206 ----------------v~~df~aG---------------~ve~~~~~~~--------~~~d~vlVEGqGgl~~P~~~~t~ 246 (349)
T 2obn_A 206 ----------------VRVDFAAG---------------AVEQMVMRYG--------KNYDILHIEGQGSLLHPGSTATL 246 (349)
T ss_dssp ----------------SBHHHHHH---------------HHHHHHHHHT--------TTCSEEEECCCCCTTSTTCCTHH
T ss_pred ----------------HHHHHHhh---------------hHHHHHHHhc--------cCCCEEEEeCCCcccCcChHhHH
Confidence 11111111 3334444443 57999999999998321122233
Q ss_pred HHHHhhccccCCCCEEEEEEeeeeEeCCCCccccCCccchHHHHHh--------CCCcccEEEEeecCCCCc---hhhhc
Q 008567 161 EALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRA--------LGLTPHLLACRSAQPLLE---NTKEK 229 (561)
Q Consensus 161 ea~~q~~~~~~~~~~~~~~~t~~~~~~~~~e~ktkptq~sv~~l~s--------~Gi~pd~iI~R~~~~l~~---~~~~k 229 (561)
.-++..+- .-++.+|=.=...+..-.+.+--|.+|.+...+. .|++.-++++-....-++ +..++
T Consensus 247 ~ll~g~~p----~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~~~~~~~~~~~~~ 322 (349)
T 2obn_A 247 PLIRGSQP----TQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAHLDEYAAKEAIAH 322 (349)
T ss_dssp HHHHHHCC----SEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHcCC----CeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCCCHHHHHHHHHH
Confidence 44444443 2267777633334443344555566776665555 689999999865443322 34445
Q ss_pred ccccCCCCC
Q 008567 230 LSQFCHVPI 238 (561)
Q Consensus 230 isl~~~v~~ 238 (561)
++..+++|.
T Consensus 323 ie~~~glPv 331 (349)
T 2obn_A 323 TIAETGLPC 331 (349)
T ss_dssp HHHHHCSCE
T ss_pred HHHHHCCCE
Confidence 555555553
No 61
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=96.41 E-value=0.013 Score=63.02 Aligned_cols=40 Identities=23% Similarity=0.414 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|+++ |. +|.||..+++.|+..|+.+|++|..+..|||-
T Consensus 101 ~vIliv-G~-~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMV-GI-QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEE-CC-TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEE-Cc-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 578888 55 99999999999999999999999999999873
No 62
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=96.38 E-value=0.005 Score=59.12 Aligned_cols=39 Identities=26% Similarity=0.369 Sum_probs=35.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
|| |.|+ | -.|.||..+|+.|+..|..+|++|..+..||-
T Consensus 1 mk-I~vs-~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVA-G-KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEE-C-SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEe-c-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 67 5556 5 89999999999999999999999999999984
No 63
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=96.32 E-value=0.0031 Score=59.38 Aligned_cols=47 Identities=23% Similarity=0.106 Sum_probs=39.7
Q ss_pred ccCCCeEEEcCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 360 LRNAECVLVPGGFGDRG---VGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 360 l~~~DGIilpGG~G~~~---~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
..++|+|++|||+|... .+...+.++++.++++|+.+||-|-++|+-
T Consensus 67 ~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~ 116 (177)
T 4hcj_A 67 AVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMAN 116 (177)
T ss_dssp GGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred HhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHH
Confidence 35799999999987642 356888999999999999999999998854
No 64
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=96.31 E-value=0.0049 Score=59.33 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=38.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHC-CCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKAC-GLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~-g~~v~~~K~dpy 42 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+ |++|..+.+||.
T Consensus 4 ~~vI~v~-s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFV-SAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEE-ESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEE-CCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 5889999 6689999999999999999999 999999999986
No 65
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=96.22 E-value=0.0097 Score=55.92 Aligned_cols=99 Identities=12% Similarity=0.209 Sum_probs=60.2
Q ss_pred eEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCC---Ccccc-cccCCCcchhhHHHhc--cCCCeEEEcC
Q 008567 298 VRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAAS---DLEDE-SAKLTPKDHAAAWETL--RNAECVLVPG 370 (561)
Q Consensus 298 ~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~---~l~~~-~~~~d~~~~~~~~~~l--~~~DGIilpG 370 (561)
.||+++ -+.++.+ .+....+.|+.+|+++.+ +.++ .+... ...-.+. ...+.+ ..+|.|++||
T Consensus 6 kkv~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------~s~~~~~~v~~~~g~~i~~d---~~l~~~~~~~~D~livpG 75 (190)
T 4e08_A 6 KSALVI-LAPGAEEMEFIIAADVLRRAGIKVTV------AGLNGGEAVKCSRDVQILPD---TSLAQVASDKFDVVVLPG 75 (190)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EESSSSSCEECTTSCEEECS---EETGGGTTCCCSEEEECC
T ss_pred cEEEEE-ECCCchHHHHHHHHHHHHHCCCEEEE------EECCCCcceecCCCcEEECC---CCHHHCCcccCCEEEECC
Confidence 478777 4544432 123577889999977644 2221 11110 0000000 001222 4689999999
Q ss_pred CCC-CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 371 GFG-DR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 371 G~G-~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
|.+ .. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 76 G~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 76 GLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 953 22 2356788899999999999999999999854
No 66
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.88 E-value=0.0067 Score=59.97 Aligned_cols=47 Identities=17% Similarity=0.317 Sum_probs=39.6
Q ss_pred cCCCeEEEcCCCCC---------------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGGFGD---------------RGVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG~G~---------------~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|+||||||++. +..+...+.++.+.++++|+.+||-|-.+|+-+
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 47999999999863 223678899999999999999999999999655
No 67
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=95.74 E-value=0.092 Score=56.11 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=36.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHC-CCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKAC-GLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~-g~~v~~~K~dpyl 43 (561)
+.|+++ |. +|.||..+++.|+..|+.+ |++|..+.+|||-
T Consensus 101 ~vI~iv-G~-~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMA-GL-QGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEE-CS-TTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEE-CC-CCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 578888 54 9999999999999999999 9999999999985
No 68
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.66 E-value=0.025 Score=59.29 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=39.4
Q ss_pred cCCCeEEEcCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|.|++|||++.. ..+..++.++.+.++++|+.+||-|-++|+-+
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~a 330 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAA 330 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHT
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHc
Confidence 579999999998642 23567889999999999999999999998543
No 69
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.56 E-value=0.0098 Score=55.01 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=38.6
Q ss_pred cCCCeEEEcCC--C-CCC------chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGG--F-GDR------GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG--~-G~~------~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|.|++||| + +.. ..+...+.++++.++++|+.+||-|-++|+-+
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 67899999999 6 542 23567788999999999999999999998643
No 70
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=95.50 E-value=0.044 Score=61.54 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=62.9
Q ss_pred ceEEEEEeccCC-Cc-ccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCC
Q 008567 297 SVRIAMVGKYVG-LA-DSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGD 374 (561)
Q Consensus 297 ~~~Iavvgky~~-~~-DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~ 374 (561)
+.||||+- -.+ .. .....+.++|+.+|+.+.+ |.+.. .. ..+ . .|.+ .....+|+|+||||...
T Consensus 537 grKVaILv-adG~fE~~El~~p~~aL~~aGa~V~v------Vsp~~-g~-GvD--~-t~~~--~~s~~fDAVvlPGG~~~ 602 (688)
T 3ej6_A 537 TLRVGVLS-TTKGGSLDKAKALKEQLEKDGLKVTV------IAEYL-AS-GVD--Q-TYSA--ADATAFDAVVVAEGAER 602 (688)
T ss_dssp TCEEEEEC-CSSSSHHHHHHHHHHHHHHTTCEEEE------EESSC-CT-TCC--E-ETTT--CCGGGCSEEEECTTCCT
T ss_pred CCEEEEEc-cCCCccHHHHHHHHHHHHHCCCEEEE------EeCCC-CC-Ccc--c-Cccc--CChhcCcEEEECCCccc
Confidence 46899983 222 22 1346789999999998866 33211 00 010 0 1111 11246999999999632
Q ss_pred -----------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 375 -----------RGVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 375 -----------~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
+.....+..++++.++++||-.||-|-|+|.-
T Consensus 603 ~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~ 645 (688)
T 3ej6_A 603 VFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQS 645 (688)
T ss_dssp TTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHH
Confidence 12357889999999999999999999999943
No 71
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=95.40 E-value=0.0076 Score=56.58 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=37.8
Q ss_pred CCCeEEEcCCCCC--CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 362 NAECVLVPGGFGD--RGVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 362 ~~DGIilpGG~G~--~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
++|+|++|||.+. ...+..++.++.+.++++|+.+||-|-++|+-
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 109 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALGG 109 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 7999999999753 22356788899999999999999999999864
No 72
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=95.34 E-value=0.022 Score=57.23 Aligned_cols=41 Identities=34% Similarity=0.466 Sum_probs=38.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+|.|.|+ | -.|+||..+|+.|+..|.++|++|..+.+||..
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~ 81 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKH 81 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSC
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 5789999 7 999999999999999999999999999999863
No 73
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=95.32 E-value=0.082 Score=56.56 Aligned_cols=39 Identities=28% Similarity=0.427 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+.|+++|. +|.||..+++.|+.+|+.+|.+|..+-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 57888854 7999999999999999999999999999876
No 74
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=95.31 E-value=0.0086 Score=58.36 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=39.4
Q ss_pred cCCCeEEEcCCCCCC--------------chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGGFGDR--------------GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG~G~~--------------~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|+||||||+|.. ..+...+.++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 579999999998641 13567889999999999999999999998754
No 75
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=95.31 E-value=0.023 Score=54.55 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=39.2
Q ss_pred cCCCeEEEcCCCCCC-chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGGFGDR-GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG~G~~-~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|.|++|||.|.. ..+..++.++.+.++++|+.+||-|-++|+-+
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~a 109 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAKN 109 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHHT
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHHc
Confidence 478999999998653 34567888999999999999999999998543
No 76
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.29 E-value=0.034 Score=58.31 Aligned_cols=47 Identities=19% Similarity=0.309 Sum_probs=39.4
Q ss_pred cCCCeEEEcCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 361 RNAECVLVPGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 361 ~~~DGIilpGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
.++|.|++|||.+.. ..+.....++.+.++++|+.+||-|-++|+-+
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 579999999997642 23567889999999999999999999998644
No 77
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=95.24 E-value=0.022 Score=54.69 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=39.0
Q ss_pred cCCCeEEEcCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 361 RNAECVLVPGGFGDR--GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 361 ~~~DGIilpGG~G~~--~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
..+|.|+||||.+.. ..+..++.++.+.++++|+.+||-|-.+|+-
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 120 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALAN 120 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHH
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHH
Confidence 379999999998753 3456888999999999999999999998854
No 78
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=95.06 E-value=0.027 Score=53.69 Aligned_cols=47 Identities=13% Similarity=0.091 Sum_probs=40.1
Q ss_pred ccCCCeEEEcCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 360 LRNAECVLVPGGFGDR--GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 360 l~~~DGIilpGG~G~~--~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
..++|.||||||.+.. . +..++.++.+.++++++.+||-|-.+|+-+
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 117 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCAAHGMALGGLWNGAWFLGRA 117 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHHHHTCEEEEETTHHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHHhhCCEEEEECHHHHHHHHc
Confidence 4679999999997653 3 778899999999999999999999998643
No 79
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=95.03 E-value=0.02 Score=54.92 Aligned_cols=50 Identities=4% Similarity=-0.089 Sum_probs=40.9
Q ss_pred HhccCCCeEEEcCCCCCC-----chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008567 358 ETLRNAECVLVPGGFGDR-----GVGGMILAAKYARENNIPYLGICLGMQISVIE 407 (561)
Q Consensus 358 ~~l~~~DGIilpGG~G~~-----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie 407 (561)
+.+.++|.||||||.+.. ..+..++.++.+.++++++.+||-|-.+|+-+
T Consensus 70 ~~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 124 (209)
T 3er6_A 70 QSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKA 124 (209)
T ss_dssp GGCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred cccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHc
Confidence 345689999999997642 24668889999999999999999999998643
No 80
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=94.98 E-value=0.036 Score=62.69 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=62.7
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCCCcccc---cccCCCcchhhHHHhccCCCeEEEcCCC
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAASDLEDE---SAKLTPKDHAAAWETLRNAECVLVPGGF 372 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~---~~~~d~~~~~~~~~~l~~~DGIilpGG~ 372 (561)
+.||+|+ -..++.+ ...+++++|+.+|+.+.+. -.....+... .+..|. .+.++ ....+|+||||||
T Consensus 600 grKVaIL-laDGfEe~El~~pvdaLr~AG~~V~vV----S~~~g~V~gs~G~~V~aD~-t~~~v--~s~~fDALVVPGG- 670 (753)
T 3ttv_A 600 GRVVAIL-LNDEVRSADLLAILKALKAKGVHAKLL----YSRMGEVTADDGTVLPIAA-TFAGA--PSLTVDAVIVPCG- 670 (753)
T ss_dssp TCEEEEE-CCTTCCHHHHHHHHHHHHHHTCEEEEE----ESSSSEEECTTSCEEECCE-ETTTS--CGGGCSEEEECCS-
T ss_pred CCEEEEE-ecCCCCHHHHHHHHHHHHHCCCEEEEE----EcCCCeEEeCCCCEEeccc-chhhC--CCcCCCEEEECCC-
Confidence 3689988 4444432 3467899999999976541 1111111100 000000 01100 1135899999999
Q ss_pred CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 373 GDR---GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 373 G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
|.. .....+..++++.++++||-+||-|-++|+
T Consensus 671 g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 671 NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 643 236788999999999999999999999984
No 81
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=94.97 E-value=0.032 Score=53.32 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+|++|..+..||.
T Consensus 2 ~~~i~v~-s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIV-SGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEE-CSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEe-cCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 4889999 6678999999999999999999999999999984
No 82
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=94.88 E-value=0.0091 Score=57.00 Aligned_cols=101 Identities=14% Similarity=0.192 Sum_probs=60.5
Q ss_pred eEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCC---Ccccc-cccCCCcchhhHHHhc--cCCCeEEEcC
Q 008567 298 VRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAAS---DLEDE-SAKLTPKDHAAAWETL--RNAECVLVPG 370 (561)
Q Consensus 298 ~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~---~l~~~-~~~~d~~~~~~~~~~l--~~~DGIilpG 370 (561)
.||+|+ -+.++.+ .+....+.|+.+|+++.+. ..... .+... ...-.+ +...+.+ .++|+|||||
T Consensus 3 ~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~~~v~~~~g~~v~~---~~~l~~~~~~~~D~livpG 74 (205)
T 2ab0_A 3 ASALVC-LAPGSEETEAVTTIDLLVRGGIKVTTA----SVASDGNLAITCSRGVKLLA---DAPLVEVADGEYDVIVLPG 74 (205)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEE----ECSSTTCCEEECTTSCEEEC---SEEHHHHTTSCCSEEEECC
T ss_pred cEEEEE-EcCCCcHHHHHHHHHHHHHCCCEEEEE----eCCCCCCceeecCCCeEEec---CCCHHHCCcccCCEEEECC
Confidence 368887 5644432 1234678899999776441 11111 11100 000000 0011233 5799999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHHH
Q 008567 371 GFGDR----GVGGMILAAKYARENNIPYLGICLGM-QISVI 406 (561)
Q Consensus 371 G~G~~----~~~g~i~~ir~a~e~~iPvLGICLGm-QLL~i 406 (561)
|++.. ..+..++.++.+.++++|+.+||-|- ++|+-
T Consensus 75 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~ 115 (205)
T 2ab0_A 75 GIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVP 115 (205)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTT
T ss_pred CcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHH
Confidence 97532 23567889999999999999999999 88853
No 83
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.80 E-value=0.02 Score=54.99 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=38.6
Q ss_pred cCCCeEEEcCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 361 RNAECVLVPGGFGDR----GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 361 ~~~DGIilpGG~G~~----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
.++|+||||||.+.. ..+...+.++++.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 479999999998742 346788999999999999999999999884
No 84
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.78 E-value=0.06 Score=56.34 Aligned_cols=100 Identities=13% Similarity=0.221 Sum_probs=62.3
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCCC---ccc-ccc-cCCCcchhhHHHhc--cCCCeEEE
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAASD---LED-ESA-KLTPKDHAAAWETL--RNAECVLV 368 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~~---l~~-~~~-~~d~~~~~~~~~~l--~~~DGIil 368 (561)
..+|+|+ -+.++.+ .+....+.|+.+|+++.+ +.++. +.. ... .-.+. ...+.+ ..+|.|||
T Consensus 10 mkkV~IL-l~dgf~~~El~~p~dvL~~Ag~~v~v------vS~~~g~~V~ss~G~~~i~~d---~~l~~v~~~~~DaLiV 79 (365)
T 3fse_A 10 KKKVAIL-IEQAVEDTEFIIPCNGLKQAGFEVVV------LGSRMNEKYKGKRGRLSTQAD---GTTTEAIASEFDAVVI 79 (365)
T ss_dssp -CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE------EESSSSCCEECTTSCCEECCS---EETTTCCGGGCSEEEE
T ss_pred ceEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE------EECCCCceeecCCCceEEeCC---CCHhhCCCcCCCEEEE
Confidence 3589988 5755543 123577889999977644 22110 110 000 00000 001222 36899999
Q ss_pred cCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 369 PGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 369 pGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
|||.|.. ..+..+..++.+.++++|+.+||-|-.+|+-
T Consensus 80 PGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~ 120 (365)
T 3fse_A 80 PGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIE 120 (365)
T ss_dssp CCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred ECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 9998642 3356788999999999999999999999854
No 85
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.73 E-value=0.027 Score=57.21 Aligned_cols=108 Identities=9% Similarity=0.008 Sum_probs=67.8
Q ss_pred hHHHHHHhhhcCCCCceEEEEEeccC-CCcccHH-HHHHHHHHcCc-eeeeeeeeEeecCCCcccccccCCCcchhhHHH
Q 008567 282 QAWTKRAETYDNLKNSVRIAMVGKYV-GLADSYL-SVVKALLHACI-ACSLKPSIDWIAASDLEDESAKLTPKDHAAAWE 358 (561)
Q Consensus 282 ~~w~~l~~~~~~~~~~~~Iavvgky~-~~~DaY~-Si~~aL~~ag~-~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~ 358 (561)
.-|+.+++... +...+|++| -+. ...+.|. .+.++++..|+ .+.+ ++-.+.+.. .++ +..+
T Consensus 43 ~i~~~~v~lag--g~~~~I~~I-ptAs~~~~~~~~~~~~~f~~lG~~~v~~------L~i~~r~~a---~~~----~~~~ 106 (291)
T 3en0_A 43 EILQTFWSRSG--GNDAIIGII-PSASREPLLIGERYQTIFSDMGVKELKV------LDIRDRAQG---DDS----GYRL 106 (291)
T ss_dssp HHHHHHHHHTT--GGGCEEEEE-CTTCSSHHHHHHHHHHHHHHHCCSEEEE------CCCCSGGGG---GCH----HHHH
T ss_pred HHHHHHHHHcC--CCCCeEEEE-eCCCCChHHHHHHHHHHHHHcCCCeeEE------EEecCcccc---CCH----HHHH
Confidence 34555666543 234799999 452 2233443 46778888898 3332 221111100 011 2235
Q ss_pred hccCCCeEEEcCCCCCC-----chhHHHHHHHHHHHcC-CCEEEEehhHHHHH
Q 008567 359 TLRNAECVLVPGGFGDR-----GVGGMILAAKYARENN-IPYLGICLGMQISV 405 (561)
Q Consensus 359 ~l~~~DGIilpGG~G~~-----~~~g~i~~ir~a~e~~-iPvLGICLGmQLL~ 405 (561)
.+.++|+|+++||--.. ...++.++|+++.+++ .|+.|.|.|.-+|+
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 68899999999984322 1257888999999998 99999999998873
No 86
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=94.32 E-value=0.3 Score=52.10 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|+++ |. +|.||..+++.|+.+|+.+|.+|..+..|+|-
T Consensus 99 ~vi~i~-G~-~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLV-GL-QGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEE-CC-TTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEE-CC-CCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 568888 54 99999999999999999999999999998863
No 87
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=94.28 E-value=0.042 Score=53.79 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=37.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
+|.|.|+ +.-.|.||..+|+.|+..|. +|++|..+.+||.-|
T Consensus 27 ~~vI~v~-s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIA-SIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEEC-CSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEE-eCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 4788888 67799999999999999999 999999999999743
No 88
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=94.17 E-value=0.04 Score=53.73 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=39.9
Q ss_pred hccCCCeEEEcCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 359 TLRNAECVLVPGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 359 ~l~~~DGIilpGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
.+.++|.|+||||+|.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 62 ~~~~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~ 112 (231)
T 3noq_A 62 DCPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGA 112 (231)
T ss_dssp TCCCCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred HCCcCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 34579999999998753 2357888999999999999999999988854
No 89
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=93.99 E-value=0.093 Score=59.06 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=62.1
Q ss_pred ceEEEEEecc-CCCc-ccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCC-C
Q 008567 297 SVRIAMVGKY-VGLA-DSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGF-G 373 (561)
Q Consensus 297 ~~~Iavvgky-~~~~-DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~-G 373 (561)
..||+|+-.- .+.. .....+.++|+.+|+.+.+ +... ..+ .. | ..|.+ .....+|+||||||. |
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~v------Vs~~-~g~-~v--D-~t~~~--~~s~~fDAVvlPGG~~g 595 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVV------VAER-XAN-NV--D-ETYSA--SDAVQFDAVVVADGAEG 595 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEE------EESS-CCT-TC--C-EESTT--CCGGGCSEEEECTTCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEE------Eecc-CCc-cc--c-cchhc--CCccccCeEEecCCCcc
Confidence 4689998320 1222 2346789999999998866 2221 110 00 0 01111 123579999999994 3
Q ss_pred ----------------CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 374 ----------------DR---GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 374 ----------------~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
.. .....++.++.+.+.++||-.||-|-++|.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 596 LFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp GCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred cccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 21 235688999999999999999999999884
No 90
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.95 E-value=0.022 Score=55.82 Aligned_cols=45 Identities=16% Similarity=0.126 Sum_probs=38.1
Q ss_pred cCCCeEEEcCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 361 RNAECVLVPGGFGDR----GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 361 ~~~DGIilpGG~G~~----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
.++|+||||||.+.. ..+...+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 468999999998742 345688899999999999999999999874
No 91
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=93.85 E-value=0.029 Score=55.53 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=38.5
Q ss_pred cCCCeEEEcCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 361 RNAECVLVPGGFGDR----GVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 361 ~~~DGIilpGG~G~~----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
.++|+|+||||.|.. ..+...+.++++.++++|+-+||-|-.+|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 479999999998752 346678899999999999999999999883
No 92
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=93.79 E-value=0.075 Score=49.62 Aligned_cols=44 Identities=25% Similarity=0.248 Sum_probs=35.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc-ccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY-LNTD 46 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy-ln~d 46 (561)
++.|.|+| .||.||..+...|...|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 35788885 89999999999999999999999999999873 3454
No 93
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=93.73 E-value=0.055 Score=52.85 Aligned_cols=43 Identities=28% Similarity=0.419 Sum_probs=38.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
+|.|.|+ +.-.|.||..+|+.|+..|..+|++|..+.+||.-|
T Consensus 6 ~~vI~v~-s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALA-NQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEEC-CSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEE-eCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 5788888 667899999999999999999999999999998633
No 94
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=93.62 E-value=0.033 Score=55.00 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=38.5
Q ss_pred cCCCeEEEcCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 361 RNAECVLVPGGFGD----RGVGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 361 ~~~DGIilpGG~G~----~~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
.++|+|+||||.|. +..+...+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 57899999999875 2346788999999999999999999999884
No 95
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=93.55 E-value=0.094 Score=53.58 Aligned_cols=43 Identities=33% Similarity=0.473 Sum_probs=39.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNT 45 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~ 45 (561)
+|.|-|+ | ==|+||..+|+-|+..|..+|+||-.+=+||+.|.
T Consensus 48 aKVIAIa-G-KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s 90 (314)
T 3fwy_A 48 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 90 (314)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCcc
Confidence 5889999 4 66999999999999999999999999999998764
No 96
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=93.17 E-value=0.099 Score=51.02 Aligned_cols=42 Identities=29% Similarity=0.463 Sum_probs=38.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
||.|.|. | --|+||..+|+.|+..|..+|++|..+-.||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888886 6 8899999999999999999999999999998643
No 97
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=93.09 E-value=0.11 Score=51.46 Aligned_cols=42 Identities=26% Similarity=0.446 Sum_probs=38.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
||.|.|+ | --|+||..+|+.|+..|..+|++|..+-.||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888887 5 8899999999999999999999999999999754
No 98
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=93.04 E-value=0.037 Score=53.18 Aligned_cols=47 Identities=19% Similarity=0.284 Sum_probs=38.5
Q ss_pred ccCCCeEEEcCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 360 LRNAECVLVPGGFGDR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 360 l~~~DGIilpGG~G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
...+|.|+||||.|.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 63 ~~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~ 112 (211)
T 3mgk_A 63 ENIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSK 112 (211)
T ss_dssp SSSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHH
T ss_pred CCCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHh
Confidence 3457999999998653 2356788899999999999999999998854
No 99
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=92.56 E-value=0.1 Score=53.27 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=36.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
||-|+|++| --|.||..+|++++..|.++|++|-.+-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467788855 78999999999999999999999999999983
No 100
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=92.35 E-value=0.051 Score=54.99 Aligned_cols=46 Identities=24% Similarity=0.415 Sum_probs=38.8
Q ss_pred ccCCCeEEEcCCCCCC-c---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008567 360 LRNAECVLVPGGFGDR-G---VGGMILAAKYARENNIPYLGICLGMQISV 405 (561)
Q Consensus 360 l~~~DGIilpGG~G~~-~---~~g~i~~ir~a~e~~iPvLGICLGmQLL~ 405 (561)
..++|+||||||.|.. . .+...+.++++.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 4679999999998754 2 35688999999999999999999998763
No 101
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=92.30 E-value=0.083 Score=52.37 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=37.7
Q ss_pred CCCeEEEcCCC-CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008567 362 NAECVLVPGGF-GDR---GVGGMILAAKYARENNIPYLGICLGMQISVI 406 (561)
Q Consensus 362 ~~DGIilpGG~-G~~---~~~g~i~~ir~a~e~~iPvLGICLGmQLL~i 406 (561)
.+|.||||||. |.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~ 132 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGA 132 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHH
Confidence 46999999998 642 3467888999999999999999999988854
No 102
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=92.25 E-value=0.04 Score=52.66 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=60.5
Q ss_pred eEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCC---Ccccc-cccCCCcchhhHHHhc--cCCCeEEEcC
Q 008567 298 VRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAAS---DLEDE-SAKLTPKDHAAAWETL--RNAECVLVPG 370 (561)
Q Consensus 298 ~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~---~l~~~-~~~~d~~~~~~~~~~l--~~~DGIilpG 370 (561)
.||+|+ -+.++.+ .+....+.|+.+|+++.+ +..+ .+... ...-.+. ...+.+ ..+|.|+|||
T Consensus 10 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~g~~~v~~~~G~~v~~d---~~l~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVP-VAHGSEEMETVIIVDTLVRAGFQVTM------AAVGDKLQVQGSRGVWLTAE---QTLEACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EESSSCSEEECTTSCEEECS---EEGGGCCGGGCSEEEECC
T ss_pred CeEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCcceecCCCcEEeCC---CCHHHCCCcCCCEEEECC
Confidence 478888 5655442 223577889999977644 2221 11110 0000000 001222 4799999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 008567 371 GFGDR----GVGGMILAAKYARENNIPYLGICLGM-QISV 405 (561)
Q Consensus 371 G~G~~----~~~g~i~~ir~a~e~~iPvLGICLGm-QLL~ 405 (561)
|.+.. ..+..++.++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 97422 23567889999999999999999998 7774
No 103
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=92.07 E-value=0.22 Score=56.43 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=63.4
Q ss_pred ceEEEEEeccCCCcc-cHHHHHHHHHHcCceeeeeeeeEeecCCCcccc---cccCCCcchhhHHHh--ccCCCeEEEcC
Q 008567 297 SVRIAMVGKYVGLAD-SYLSVVKALLHACIACSLKPSIDWIAASDLEDE---SAKLTPKDHAAAWET--LRNAECVLVPG 370 (561)
Q Consensus 297 ~~~Iavvgky~~~~D-aY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~---~~~~d~~~~~~~~~~--l~~~DGIilpG 370 (561)
..||+|+ -+.++.+ ......++|+.+|+++.+ .......+... .+..+. .+ +. ...+|+|||||
T Consensus 534 ~rkVaIL-l~dGfe~~El~~p~dvL~~AG~~V~i----vS~~gg~V~ss~G~~v~~d~-~l----~~v~~~~yDaViVPG 603 (715)
T 1sy7_A 534 SRRVAII-IADGYDNVAYDAAYAAISANQAIPLV----IGPRRSKVTAANGSTVQPHH-HL----EGFRSTMVDAIFIPG 603 (715)
T ss_dssp TCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE----EESCSSCEEBTTSCEECCSE-ET----TTCCGGGSSEEEECC
T ss_pred CCEEEEE-EcCCCCHHHHHHHHHHHHhcCCEEEE----EECCCCceecCCCceEeccc-cc----ccCCcccCCEEEEcC
Confidence 3689999 5654432 234578889999977654 11111111100 000000 01 11 24689999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhc
Q 008567 371 GFGDR----GVGGMILAAKYARENNIPYLGICLGMQISVIEFA 409 (561)
Q Consensus 371 G~G~~----~~~g~i~~ir~a~e~~iPvLGICLGmQLL~ie~g 409 (561)
|.+.. .....+..++.+.++++|+.+||-|-.+|+-++|
T Consensus 604 G~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 604 GAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred CcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 95322 2356788999999999999999999999975533
No 104
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=91.30 E-value=0.19 Score=51.77 Aligned_cols=41 Identities=32% Similarity=0.526 Sum_probs=36.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+|-|+|++| -.|.||..+|++++..|.++|++|-.+-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777755 78999999999999999999999999999984
No 105
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=91.18 E-value=0.19 Score=52.05 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=40.6
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTD 46 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d 46 (561)
||.|.|+ +.--|+||..+|+.|+..|..+|+||-.+=+||.-|.-
T Consensus 1 MkvIav~-s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~ 45 (361)
T 3pg5_A 1 MRTISFF-NNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNAT 45 (361)
T ss_dssp CEEEEBC-CSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTH
T ss_pred CeEEEEE-cCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChh
Confidence 7999999 55889999999999999999999999999999986543
No 106
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=91.11 E-value=0.2 Score=47.55 Aligned_cols=39 Identities=28% Similarity=0.338 Sum_probs=35.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
|.|.|+ +.-.|.||..+|..|+..|..+| +|..+..||.
T Consensus 1 kvI~v~-s~KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q 39 (209)
T 3cwq_A 1 MIITVA-SFKGGVGKTTTAVHLSAYLALQG-ETLLIDGDPN 39 (209)
T ss_dssp CEEEEE-ESSTTSSHHHHHHHHHHHHHTTS-CEEEEEECTT
T ss_pred CEEEEE-cCCCCCcHHHHHHHHHHHHHhcC-CEEEEECCCC
Confidence 457777 56789999999999999999999 9999999986
No 107
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=90.80 E-value=0.15 Score=47.41 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=33.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
|+.|.|+| -||.||..++..|.++++..|+++-.+|+|+
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg 40 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHA 40 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC--
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcC
Confidence 47788995 8999999999999999999999999999965
No 108
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=90.41 E-value=0.35 Score=49.46 Aligned_cols=39 Identities=21% Similarity=0.391 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+.|+|+ |. +|.||..+++.|+.+|+..|.+|..+-.|+|
T Consensus 106 ~vI~iv-G~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLV-GV-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEE-SS-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEE-CC-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 578999 55 9999999999999999999999999988875
No 109
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=90.08 E-value=0.26 Score=51.10 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=38.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNT 45 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~ 45 (561)
+|.|.|+ +.-.|+||..+|+.|+..|..+|++|..+-+||+-|+
T Consensus 143 ~kvIav~-s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFT-SPCGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEE-CSSTTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEE-CCCCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 5789999 5578999999999999999999999999999866443
No 110
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=89.86 E-value=0.27 Score=48.71 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=36.6
Q ss_pred EEEEEeCC-ccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 2 KYVLVTGG-VVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 2 k~i~v~gg-v~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
|-|.|++. .-.|+||..+|+.|+..|..+|++|..+..||.-|
T Consensus 35 ~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 35 EAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp SCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred cEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 44666632 57899999999999999999999999999999754
No 111
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=89.77 E-value=0.25 Score=50.44 Aligned_cols=40 Identities=28% Similarity=0.399 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
|-|+|++| --|+||..+|+.|+..|.++|++|-.+-.||.
T Consensus 19 ~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34666745 78999999999999999999999999999985
No 112
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=89.69 E-value=0.21 Score=51.67 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=35.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH--HCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK--ACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~--~~g~~v~~~K~dpy 42 (561)
|.|.|++| --|+||..+|++|+..|. .+|.||-.+..||-
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 44666656 789999999999999999 99999999999984
No 113
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=89.68 E-value=0.34 Score=44.03 Aligned_cols=35 Identities=34% Similarity=0.534 Sum_probs=31.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|++|+|+| .+|.||+.++..|+..|...|+++..+
T Consensus 1 M~~I~i~G--~~GsGKsT~~~~L~~~l~~~g~~~~~~ 35 (194)
T 1nks_A 1 MKIGIVTG--IPGVGKSTVLAKVKEILDNQGINNKII 35 (194)
T ss_dssp CEEEEEEE--CTTSCHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CeEEEEEC--CCCCCHHHHHHHHHHHHHhcCceEEEE
Confidence 78999996 489999999999999999999888766
No 114
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=89.26 E-value=0.36 Score=53.17 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=35.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
+|++|++ |. .|+||..+|++++..|.++|++|-.+-.||
T Consensus 8 ~~i~~~s-gk-GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 8 PPYLFFT-GK-GGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CSEEEEE-CS-TTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEe-CC-CcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3677777 55 999999999999999999999999999998
No 115
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=89.16 E-value=0.49 Score=48.07 Aligned_cols=39 Identities=23% Similarity=0.386 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+.|+++| . +|.||..+++.|+.+|+..|.+|..+-.|+|
T Consensus 105 ~vi~ivG-~-~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~ 143 (306)
T 1vma_A 105 FVIMVVG-V-NGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 143 (306)
T ss_dssp EEEEEEC-C-TTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred eEEEEEc-C-CCChHHHHHHHHHHHHHhcCCEEEEEccccc
Confidence 6789994 5 9999999999999999999999999988876
No 116
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=88.06 E-value=0.46 Score=49.17 Aligned_cols=40 Identities=38% Similarity=0.529 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHH--HCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLK--ACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~--~~g~~v~~~K~dpy 42 (561)
+|++|++| --|.||..+|++++..|. ..|.+|-.+-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 36788874 889999999999999999 99999999999985
No 117
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=88.01 E-value=0.44 Score=48.99 Aligned_cols=39 Identities=28% Similarity=0.502 Sum_probs=34.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
|++|++ | --|.||..+|++++..|..+|.+|-.+-.||-
T Consensus 17 ~i~~~s-g-kGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 17 RWIFVG-G-KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp CEEEEE-C-STTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred EEEEEe-C-CCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 456555 5 78999999999999999999999999999974
No 118
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=87.77 E-value=0.27 Score=52.42 Aligned_cols=40 Identities=30% Similarity=0.517 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|+++| . +|.||..+++.|+..|+.+|++|..+-.|||-
T Consensus 100 ~vI~ivG-~-~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVG-I-QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEEC-C-SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 4688895 3 89999999999999999999999999999984
No 119
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=87.57 E-value=0.54 Score=47.38 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=34.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHH-CCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKA-CGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~-~g~~v~~~K~dpy 42 (561)
+.|+++ |. +|.||..+++.|+.+|+. +|.+|..+-.|||
T Consensus 106 ~vi~lv-G~-~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 106 KYIVLF-GS-TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp SEEEEE-ES-TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred cEEEEE-CC-CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 467888 44 799999999999999995 8999999999997
No 120
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=85.79 E-value=0.93 Score=41.40 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=28.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
++|.++|+ +|.||+.++..|...|...|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37899976 6889999999999999999998864
No 121
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=85.24 E-value=0.63 Score=46.82 Aligned_cols=73 Identities=25% Similarity=0.280 Sum_probs=50.1
Q ss_pred ceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCc
Q 008567 297 SVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRG 376 (561)
Q Consensus 297 ~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~ 376 (561)
.+||+|+++...- ...+.+.|+..|+++.+ .... .+.+.++|.||.-||-|.
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~-------~~~~----------------~~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVEL-------FNQP----------------SEELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEE-------ESSC----------------CGGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEE-------cccc----------------ccccCCCCEEEEECCCHH--
Confidence 4789999876322 46788999999987643 1111 034568899999998553
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhH
Q 008567 377 VGGMILAAKYARENNIPYLGICLGM 401 (561)
Q Consensus 377 ~~g~i~~ir~a~e~~iPvLGICLGm 401 (561)
++.+++.+... +|++||=+|.
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G~ 101 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTGR 101 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECSS
T ss_pred ---HHHHHHHhCCC-CcEEEECCCC
Confidence 44566655445 9999998873
No 122
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=84.96 E-value=1 Score=48.96 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|+|+ |. .|.||..++..|+..|+.+|.+|..+-.|||-
T Consensus 102 ~vI~iv-G~-~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFV-GL-QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEE-CS-TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEE-CC-CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 468888 55 69999999999999999999999999999974
No 123
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=84.21 E-value=0.35 Score=45.08 Aligned_cols=36 Identities=22% Similarity=0.436 Sum_probs=31.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
++|.|+| .||.||+.++..|...|...|++|..++-
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788886 68999999999999999999999987764
No 124
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=84.06 E-value=0.34 Score=45.70 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=32.5
Q ss_pred ccCCCeEEEcCCCCC-C---chhHHHHHHHHHHH-cCCCEEEEehhHHHH
Q 008567 360 LRNAECVLVPGGFGD-R---GVGGMILAAKYARE-NNIPYLGICLGMQIS 404 (561)
Q Consensus 360 l~~~DGIilpGG~G~-~---~~~g~i~~ir~a~e-~~iPvLGICLGmQLL 404 (561)
+.++|+|+||||.+. . ..+...+.++.+.+ .++|+-.||-|..++
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~ 120 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTA 120 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHH
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccch
Confidence 456899999999642 2 23556777877654 478999999998443
No 125
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=83.11 E-value=0.3 Score=47.84 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=32.7
Q ss_pred ccCCCeEEEcCC-CCCCc---hhHHHHHHHHHHHcCC-CEEEEehhHHHHHHH
Q 008567 360 LRNAECVLVPGG-FGDRG---VGGMILAAKYARENNI-PYLGICLGMQISVIE 407 (561)
Q Consensus 360 l~~~DGIilpGG-~G~~~---~~g~i~~ir~a~e~~i-PvLGICLGmQLL~ie 407 (561)
..++|.|||||| +|... .+..++.+ ..+++. ++.+||-|-.+|+-+
T Consensus 78 ~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~A 128 (236)
T 3bhn_A 78 VKEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHEL 128 (236)
T ss_dssp GGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHHT
T ss_pred ccCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHHc
Confidence 567999999999 56432 23455556 334455 999999999998643
No 126
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.76 E-value=1.2 Score=43.72 Aligned_cols=33 Identities=36% Similarity=0.559 Sum_probs=28.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
|| |+||||+ |.+-+.|++.|.++|++|..+--+
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECC
Confidence 78 8999865 788899999999999999987553
No 127
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=82.47 E-value=1.2 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
+.|+++|+ +|.||+.++..|...|...|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~ 33 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSL 33 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 36899976 6779999999999999989988754
No 128
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=82.03 E-value=0.97 Score=47.13 Aligned_cols=44 Identities=23% Similarity=0.415 Sum_probs=31.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHH------HCCCeeeEeecCccccC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLK------ACGLRVTSIKIDPYLNT 45 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~------~~g~~v~~~K~dpyln~ 45 (561)
+|.|.|+ +.--|+||..+|+.|+..|. .+|++|-.+-+||.-|.
T Consensus 111 ~~vIav~-s~KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l 160 (403)
T 3ez9_A 111 PYVIFVV-NLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASS 160 (403)
T ss_dssp CEEEEEC-CC--------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGG
T ss_pred ceEEEEE-cCCCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCCh
Confidence 4778888 66789999999999999999 68999999999996554
No 129
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=81.97 E-value=1.5 Score=45.53 Aligned_cols=43 Identities=23% Similarity=0.434 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHH------CCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKA------CGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~------~g~~v~~~K~dpyln 44 (561)
+|.|.|+ +.--|+||..+|+.|+..|.. +|++|-.+=+||.-|
T Consensus 108 ~~vIav~-s~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFIS-NLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEEC-CSSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEE-eCCCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 4678888 666899999999999999994 799999999998543
No 130
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=81.95 E-value=1.8 Score=40.37 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=34.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
..|.|+|+ ||.||+.++..|+.+|...|.+|...-.|.+.
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 46788875 88999999999999999999999888777654
No 131
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=81.74 E-value=1.7 Score=43.78 Aligned_cols=40 Identities=30% Similarity=0.473 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|+++ | .+|.||..+++.|+.+|+.+|.+|..+-.|||-
T Consensus 99 ~vi~i~-G-~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLV-G-VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEE-C-SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEE-C-CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 567888 4 489999999999999999999999999998864
No 132
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=80.94 E-value=2.1 Score=42.99 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
+.|.++ | -+|.||..++..|+.+++..|.+|..+-.|++-
T Consensus 99 ~~i~i~-g-~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLV-G-LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEE-C-CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEE-C-CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 578888 5 489999999999999999999999999888763
No 133
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=80.49 E-value=5.1 Score=40.75 Aligned_cols=39 Identities=36% Similarity=0.528 Sum_probs=34.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+.|.++| -.|.||+.+...|+..++..|.+|..+-.||.
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~ 95 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPS 95 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCC
Confidence 4577784 89999999999999999999999999888775
No 134
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=78.91 E-value=1.8 Score=42.15 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=29.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|+.|+++|. +|.||+.+|..|+..|...|+.+..
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~ 37 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIV 37 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 468999964 8999999999999999999987654
No 135
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=78.85 E-value=2.3 Score=44.34 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=55.2
Q ss_pred ceEEEEEeccCC--CcccHHHHHHHHHHcCceeeeeeeeEeecCCCc--ccc-ccc---CCCcchh-hHHHhccCCCeEE
Q 008567 297 SVRIAMVGKYVG--LADSYLSVVKALLHACIACSLKPSIDWIAASDL--EDE-SAK---LTPKDHA-AAWETLRNAECVL 367 (561)
Q Consensus 297 ~~~Iavvgky~~--~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l--~~~-~~~---~d~~~~~-~~~~~l~~~DGIi 367 (561)
..+|+||+|... +......+.++|...|+.+.+.-.+ .+++ ... ... .....+. +..+.-..+|-||
T Consensus 38 ~k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI 113 (365)
T 3pfn_A 38 PKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKV----LEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFII 113 (365)
T ss_dssp CCEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHH----HHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEE
T ss_pred CCEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHH----hhhhccccccccccccccccccccChhhcccCCCEEE
Confidence 358999999842 4455677999999988766432100 0000 000 000 0000000 0001225789999
Q ss_pred EcCCCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 008567 368 VPGGFGDRGVGGMILAAKYARENNIPYLGICLGM 401 (561)
Q Consensus 368 lpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLGm 401 (561)
.-||-|. ++.+++.+...++|+|||=+|.
T Consensus 114 ~lGGDGT-----~L~aa~~~~~~~~PvlGiN~G~ 142 (365)
T 3pfn_A 114 CLGGDGT-----LLYASSLFQGSVPPVMAFHLGS 142 (365)
T ss_dssp EESSTTH-----HHHHHHHCSSSCCCEEEEESSS
T ss_pred EEcChHH-----HHHHHHHhccCCCCEEEEcCCC
Confidence 9998774 5666676666789999999874
No 136
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=78.82 E-value=2 Score=39.69 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=29.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+.|+++|+ +|.||+.++..|+..|...|++|..+
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 47899975 78899999999999999999998543
No 137
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=77.77 E-value=2.7 Score=38.26 Aligned_cols=39 Identities=31% Similarity=0.361 Sum_probs=32.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
++|+++| .+|.||+.++..|+..|...|++|..+..|.+
T Consensus 14 ~~i~l~G--~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTG--LPGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 5788885 38999999999999999999999887766543
No 138
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=76.77 E-value=2.8 Score=43.00 Aligned_cols=41 Identities=34% Similarity=0.553 Sum_probs=33.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
..|.++| . .|.||+.++..|+..|...|++|..+-.||.-.
T Consensus 80 ~~I~i~G-~-~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~ 120 (355)
T 3p32_A 80 HRVGITG-V-PGVGKSTAIEALGMHLIERGHRVAVLAVDPSST 120 (355)
T ss_dssp EEEEEEC-C-TTSSHHHHHHHHHHHHHTTTCCEEEEEEC----
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCC
Confidence 3577884 3 999999999999999999999999999988654
No 139
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=75.84 E-value=2.1 Score=44.64 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=32.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
|+++|++ | -.|.||..+|++++..|..+|++|-.+-. |
T Consensus 2 ~~i~~~~-g-kGG~GKTt~a~~la~~la~~g~~vllvd~-~ 39 (374)
T 3igf_A 2 ALILTFL-G-KSGVARTKIAIAAAKLLASQGKRVLLAGL-A 39 (374)
T ss_dssp CEEEEEE-C-SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-S
T ss_pred cEEEEEe-C-CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-C
Confidence 4667776 4 34999999999999999999999999877 5
No 140
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=75.70 E-value=3.4 Score=37.34 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
++|.++|. +|.||+.++..|+..|+..|+.+..+
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i~~ 39 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCYTL 39 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 57889964 89999999999999998889876544
No 141
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=74.43 E-value=2.9 Score=37.65 Aligned_cols=31 Identities=29% Similarity=0.367 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
++|+|+|. +|.||+.++..|+..|...|++.
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~ 34 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNY 34 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcce
Confidence 47899964 89999999999999998887543
No 142
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=73.38 E-value=3.7 Score=37.84 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=29.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+.|+++|+ +|.||+.++..|...|...|++|..+
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 57899975 68899999999999999999988543
No 143
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=73.36 E-value=4 Score=38.85 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=30.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
++|.+.| .+|.||+..+..|...|..+|++|....
T Consensus 7 ~~i~~eG--~~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEG--PEGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEc--CCCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 6889996 4799999999999999999999997654
No 144
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=73.05 E-value=3.6 Score=41.44 Aligned_cols=94 Identities=28% Similarity=0.278 Sum_probs=48.5
Q ss_pred eEEEEEeccCC--CcccHHHHHHHHHHcCceeeeeeeeEeecCCCcc-----cccc---cCCCcchhhHHHhccCCCeEE
Q 008567 298 VRIAMVGKYVG--LADSYLSVVKALLHACIACSLKPSIDWIAASDLE-----DESA---KLTPKDHAAAWETLRNAECVL 367 (561)
Q Consensus 298 ~~Iavvgky~~--~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~-----~~~~---~~d~~~~~~~~~~l~~~DGIi 367 (561)
.||+++.+... .......+.+.|+..|+++.+... ..+.+. .... ..+...+........++|.||
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA----EAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc----hhhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 47899877632 223345688889999987644211 111110 0000 000000000001235789999
Q ss_pred EcCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008567 368 VPGGFGDRGVGGMILAAKYARENNIPYLGICLG 400 (561)
Q Consensus 368 lpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLG 400 (561)
+-||-|+ ...+++.+...++|+|||=+|
T Consensus 81 ~~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 9998553 556677777778999999776
No 145
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=72.59 E-value=2.6 Score=37.25 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=19.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
|+.|+|+|+ ||.||+.++..|+..|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 678999974 8999998888877655
No 146
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=71.67 E-value=5.1 Score=40.87 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=33.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
.+|++. |. ||.||..+++.|+.+++..|.+|...-.|.|
T Consensus 130 ~vi~lv-G~-nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 130 YVIMFV-GF-NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEEE-CC-TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEE-CC-CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 467888 44 9999999999999999999999988766543
No 147
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=71.42 E-value=4 Score=44.69 Aligned_cols=42 Identities=24% Similarity=0.311 Sum_probs=35.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
+-|+|+ +--.|+||..+|++++..|..+|.+|..+-.||.-|
T Consensus 327 ~~~~~~-~~~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~ 368 (589)
T 1ihu_A 327 HGLIML-MGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAH 368 (589)
T ss_dssp CEEEEE-ECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC--
T ss_pred CeEEEE-ecCCCCChhhHHHHHHHHHHHCCCcEEEEeCCCccc
Confidence 345666 457899999999999999999999999999998744
No 148
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=71.35 E-value=6.4 Score=36.46 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=41.6
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCC
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~d 63 (561)
-++++|- +|.||..++..++..+...|++|..+..+.+.+.-...+.-+....+.+.||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778865 6999999999999999999999988877655443323333333345555555
No 149
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.33 E-value=2.7 Score=40.57 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=26.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||||.-||+|+ ++++.|.++|++|...-.
T Consensus 23 k~vlITGasg~GIG~-----~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGS-----TTARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHH-----HHHHHHHHCCCEEEEecC
Confidence 679999887789997 567788889999887533
No 150
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=70.84 E-value=3.2 Score=41.54 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=31.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCC--CeeeEe-ecCcccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACG--LRVTSI-KIDPYLN 44 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g--~~v~~~-K~dpyln 44 (561)
..|.|+|+ ||.||+.++..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 36778865 67889999999999999876 555556 7777653
No 151
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=69.68 E-value=4.5 Score=40.76 Aligned_cols=38 Identities=34% Similarity=0.477 Sum_probs=32.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
.+|.+. |. ||.||..++..|+.+++..|.+|...-.|.
T Consensus 103 ~vi~lv-G~-nGsGKTTll~~Lagll~~~~g~V~l~g~D~ 140 (304)
T 1rj9_A 103 RVVLVV-GV-NGVGKTTTIAKLGRYYQNLGKKVMFCAGDT 140 (304)
T ss_dssp SEEEEE-CS-TTSSHHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred eEEEEE-CC-CCCcHHHHHHHHHHHHHhcCCEEEEEeecC
Confidence 368888 44 999999999999999999999988766654
No 152
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=68.89 E-value=5.7 Score=38.66 Aligned_cols=39 Identities=18% Similarity=0.229 Sum_probs=31.9
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
..++. +--.|+||..++..+|..|.++|++|..+-+||-
T Consensus 7 l~I~~-~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 7 LKVFL-GAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp EEEEE-ESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred EEEEE-ECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 33344 4468999999999999999999999998777663
No 153
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.28 E-value=3.7 Score=39.40 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=24.8
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||||.. +|+|+. |++.|.++|++|...
T Consensus 15 k~vlITGa~~~~giG~~-----ia~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYG-----IAKACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHH-----HHHHHHHcCCCEEEE
Confidence 7899997753 899975 667788899998775
No 154
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=66.32 E-value=2.8 Score=39.56 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=24.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||.++|||| .||+|+. +++.|.++|++|...=.
T Consensus 1 Mk~vlVTGa-s~gIG~~-----~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGA-SSGLGAE-----LAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEEST-TSHHHHH-----HHHHHHHTTCCEEEEES
T ss_pred CCEEEEecC-CchHHHH-----HHHHHHHCCCEEEEEeC
Confidence 788999965 5888865 66788889999887543
No 155
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=66.13 E-value=8.1 Score=35.90 Aligned_cols=39 Identities=26% Similarity=0.503 Sum_probs=29.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
..|.|+|. ||.||+.++..|+.+|...|.++..+-.|+|
T Consensus 23 ~~v~I~G~--sGsGKSTl~~~l~~~~~~~g~~~g~v~~d~~ 61 (208)
T 3c8u_A 23 QLVALSGA--PGSGKSTLSNPLAAALSAQGLPAEVVPMDGF 61 (208)
T ss_dssp EEEEEECC--TTSCTHHHHHHHHHHHHHTTCCEEEEESGGG
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCceEEEecCCC
Confidence 35677764 8999999999999999987755555555543
No 156
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=64.90 E-value=4.1 Score=36.19 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=20.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
|+.|+++| .+|.||+.++..|+..|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899997 58999998888877765
No 157
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=64.66 E-value=3.9 Score=40.80 Aligned_cols=41 Identities=24% Similarity=0.426 Sum_probs=31.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
+.|.||| .||.||+.+|..|...|...|+++..+-.|=|-.
T Consensus 6 ~iIgItG--~sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTG--SSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEES--CC---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 3688997 5888999999999999988899888888877653
No 158
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=64.55 E-value=6.9 Score=37.99 Aligned_cols=35 Identities=26% Similarity=0.550 Sum_probs=29.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCe-eeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLR-VTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~-v~~~K 38 (561)
++|.+.| .+|.||+..+..|...|..+|++ |....
T Consensus 28 ~~i~~eG--~~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEG--LEGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEE--STTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 5888886 47999999999999999999999 55444
No 159
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=64.39 E-value=7.8 Score=42.06 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
..|++. |. ||.||..+...|+.+|+..|.+|...-.|
T Consensus 294 eVI~LV-Gp-NGSGKTTLl~~LAgll~~~~G~V~l~g~D 330 (503)
T 2yhs_A 294 FVILMV-GV-NGVGKTTTIGKLARQFEQQGKSVMLAAGD 330 (503)
T ss_dssp EEEEEE-CC-TTSSHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred eEEEEE-CC-CcccHHHHHHHHHHHhhhcCCeEEEecCc
Confidence 367888 44 89999999999999999988888765443
No 160
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=64.22 E-value=4.6 Score=38.46 Aligned_cols=33 Identities=30% Similarity=0.632 Sum_probs=25.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 1 mk~vlVTGa-s~gIG~~-----~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGC-ATGIGAA-----TRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 788999955 5788865 66778889999987643
No 161
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=64.14 E-value=5.3 Score=37.23 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH-HCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK-ACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~-~~g~~v~~~K~ 39 (561)
++|+++|. +|.||+.++..|...|. ..|+++..+-.
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~~ 62 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLDG 62 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEECH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEECC
Confidence 57889964 89999999999999998 88887655443
No 162
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=63.69 E-value=7.1 Score=35.66 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
+.|+++|. +|.||+.++..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 58899965 78999999999999887766 54
No 163
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=63.35 E-value=7 Score=36.10 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
|| |+|||| .+++| +.|.+.|.++|++|..+-.+
T Consensus 1 Mk-ilVtGa-tG~iG-----~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MK-IAVLGA-TGRAG-----SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CE-EEEETT-TSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CE-EEEEcC-CCHHH-----HHHHHHHHHCCCEEEEEEec
Confidence 67 899965 45555 56777888889999887653
No 164
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=63.06 E-value=5.3 Score=38.35 Aligned_cols=31 Identities=26% Similarity=0.206 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
||.++|||| .+|+|+. +++.|.++|++|...
T Consensus 1 Mk~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNV-KHFGGMG-----SALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESST-TSTTHHH-----HHHHHHHTTCEEEEC
T ss_pred CeEEEEeCC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 788999955 5999975 677788899998874
No 165
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=62.94 E-value=7.8 Score=36.88 Aligned_cols=33 Identities=27% Similarity=0.517 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCC-eeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGL-RVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~-~v~~ 36 (561)
++|.+.| .+|.||+..+..|...|+.+|+ .|..
T Consensus 4 ~~i~~eG--~~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEG--LEGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCCccee
Confidence 5888886 4799999999999999999999 5543
No 166
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=62.93 E-value=8.2 Score=35.37 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=24.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
|| |+||||. +++| +.|.+.|.++|++|..+--+
T Consensus 1 Mk-vlVtGat-G~iG-----~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MK-IGIIGAT-GRAG-----SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CE-EEEETTT-SHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred Ce-EEEEcCC-chhH-----HHHHHHHHhCCCEEEEEEcC
Confidence 56 8999654 4555 56777888899999987653
No 167
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=62.59 E-value=5.9 Score=38.68 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=26.1
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||||.. ||+|+. |++.|.++|++|...=.
T Consensus 27 k~vlVTGasg~~GIG~~-----ia~~l~~~G~~V~~~~r 60 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYG-----IAKAMHREGAELAFTYV 60 (280)
T ss_dssp CEEEECCCCSTTCHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCCCCHHHH-----HHHHHHHcCCEEEEeeC
Confidence 7899997764 789965 67778889999887544
No 168
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=61.52 E-value=6.2 Score=36.49 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=32.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDA 47 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~ 47 (561)
+.|.|+| .+|.||..++..|..-+... ++|..+..||...+|+
T Consensus 31 ~~i~i~G--~~g~GKTTl~~~l~~~~~~~-~~~~~i~~d~~~~~d~ 73 (221)
T 2wsm_A 31 VAVNIMG--AIGSGKTLLIERTIERIGNE-VKIGAMLGDVVSKADY 73 (221)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHTTT-SCEEEEECSCCCHHHH
T ss_pred eEEEEEc--CCCCCHHHHHHHHHHHhccC-CeEEEEecCCCCchhH
Confidence 4577775 78999998888887777555 8999999887655443
No 169
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=61.29 E-value=5.9 Score=38.07 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=24.7
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||||.- ||+|+. +++.|.++|++|...
T Consensus 8 k~vlVTGasg~~GIG~~-----ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWG-----IARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHH-----HHHHHHHCCCEEEEe
Confidence 6799997765 789864 677888899998764
No 170
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=60.59 E-value=8.5 Score=38.12 Aligned_cols=90 Identities=21% Similarity=0.189 Sum_probs=48.8
Q ss_pred eEEEEEeccC--CCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCC
Q 008567 298 VRIAMVGKYV--GLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDR 375 (561)
Q Consensus 298 ~~Iavvgky~--~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~ 375 (561)
.||+++.+-. ........+.+.|+..|+++.+.- -..+.+..... . .. .......++|.||+-||-|+
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~----~~~~~~~~~~~--~--~~-~~~~~~~~~D~vi~~GGDGT- 75 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQ----QIAHELQLKNV--P--TG-TLAEIGQQADLAVVVGGDGN- 75 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEEH----HHHHHTTCSSC--C--EE-CHHHHHHHCSEEEECSCHHH-
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEec----chhhhcccccc--c--cc-chhhcccCCCEEEEEcCcHH-
Confidence 4688886542 223345668899999998764410 00000000000 0 00 00112346899999998554
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhH
Q 008567 376 GVGGMILAAKYARENNIPYLGICLGM 401 (561)
Q Consensus 376 ~~~g~i~~ir~a~e~~iPvLGICLGm 401 (561)
..++++.+.+.++|+|||=+|.
T Consensus 76 ----~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 76 ----MLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp ----HHHHHHHHTTSSCEEEEBCSSS
T ss_pred ----HHHHHHHhhcCCCCEEEEECCC
Confidence 4566666666789999996553
No 171
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=60.42 E-value=5.1 Score=36.61 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
++|+++|+ +|.||+.++..|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 58999975 7889998887777655 3676544
No 172
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=60.12 E-value=8.7 Score=36.98 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=29.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHH-CCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKA-CGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~-~g~~v~~ 36 (561)
++|.+.| .+|.||+..+..|...|.. +|++|..
T Consensus 22 ~~i~~~G--~~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEG--IDGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHhhccCceeeE
Confidence 6889996 4799999999999999999 9998876
No 173
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=59.96 E-value=5.7 Score=36.48 Aligned_cols=23 Identities=35% Similarity=0.401 Sum_probs=18.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGV 25 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ 25 (561)
|+.|.|+|+ +|.||+.++..|+.
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 678999986 78899987776665
No 174
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=59.23 E-value=6.5 Score=39.13 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGV-VSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv-~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||||. .||||+. +++.|.++|++|...-
T Consensus 10 k~~lVTGa~~s~GIG~a-----ia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWA-----ICKLLRAAGARVLVGT 42 (319)
T ss_dssp CEEEEECCCCTTSHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCCCcHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999875 8999975 6777888999998753
No 175
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=58.77 E-value=6.9 Score=38.40 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=25.5
Q ss_pred EEEEEeCCc-cCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGV-VSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv-~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||||. .||+|+. +++.|.++|++|...-
T Consensus 9 k~~lVTGas~~~GIG~a-----ia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWA-----VAKSLAAAGAEILVGT 41 (297)
T ss_dssp CEEEEECCSSSSSHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEee
Confidence 679999875 4899965 6677888999998763
No 176
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=58.50 E-value=9.7 Score=36.25 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.7
Q ss_pred cCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 11 VSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 11 ~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
-.|.||..++..|+..|. +|++|..+-.||--+
T Consensus 22 kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 22 TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 579999999999999999 999999999988543
No 177
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=58.06 E-value=13 Score=37.28 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=30.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
+.|.+.| .+|.||..+++.|+.+++..|-+|...-.|
T Consensus 101 ~vi~lvG--~nGsGKTTll~~Lag~l~~~~g~V~l~g~d 137 (302)
T 3b9q_A 101 AVIMIVG--VNGGGKTTSLGKLAHRLKNEGTKVLMAAGD 137 (302)
T ss_dssp EEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cEEEEEc--CCCCCHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 4678885 499999999999999999888888764443
No 178
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=57.80 E-value=6.7 Score=33.84 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=31.5
Q ss_pred hccCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 359 TLRNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 359 ~l~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++.+|++|+.-|.-+...+.....|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 478899999887766655566677788888999999998
No 179
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=57.48 E-value=12 Score=39.49 Aligned_cols=34 Identities=38% Similarity=0.521 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|=|| |+ -|||.+++-|..+|++.||+|-.+..
T Consensus 53 ~vI~Vt-GT---NGKgSt~~~l~~iL~~~G~~vg~~tS 86 (437)
T 3nrs_A 53 KIFTVA-GT---NGKGTTCCTLEAILLAAGLRVGVYSS 86 (437)
T ss_dssp EEEEEE-CS---SSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEE-CC---cChHHHHHHHHHHHHHCCCcEEEECC
Confidence 678888 43 69999999999999999999977643
No 180
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=57.24 E-value=11 Score=34.75 Aligned_cols=31 Identities=32% Similarity=0.383 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
+.|+++| .||.||+.++..|+.+|...|..+
T Consensus 26 ~~i~l~G--~sGsGKSTl~~~La~~l~~~G~~~ 56 (200)
T 3uie_A 26 CVIWVTG--LSGSGKSTLACALNQMLYQKGKLC 56 (200)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhcCceE
Confidence 4677885 599999999999999998888654
No 181
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=57.11 E-value=8.4 Score=37.13 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=27.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHC----CCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKAC----GLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~----g~~v~~~K~ 39 (561)
++|.+.| .+|.||+..+..|...|..+ |++|.....
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~re 65 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTRE 65 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEES
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeecC
Confidence 5888886 58999999999999999999 999865543
No 182
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=57.02 E-value=8.1 Score=37.68 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=25.7
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||||.. +|+|+. +++.|.++|++|...-.
T Consensus 22 k~vlVTGas~~~gIG~~-----ia~~l~~~G~~V~~~~r 55 (285)
T 2p91_A 22 KRALITGVANERSIAYG-----IAKSFHREGAQLAFTYA 55 (285)
T ss_dssp CEEEECCCSSTTSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCcHHHH-----HHHHHHHcCCEEEEEeC
Confidence 6799998764 899975 66778889999887533
No 183
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.99 E-value=4.5 Score=39.99 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=25.8
Q ss_pred CCCeEEEcCCCCCCchhHHHHHHHHHHHc--CCCEEEEehhH
Q 008567 362 NAECVLVPGGFGDRGVGGMILAAKYAREN--NIPYLGICLGM 401 (561)
Q Consensus 362 ~~DGIilpGG~G~~~~~g~i~~ir~a~e~--~iPvLGICLGm 401 (561)
++|.||.-||-|+ +..+++.+... ++|+|||=+|.
T Consensus 35 ~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 5699999998553 44566666554 89999998774
No 184
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=56.88 E-value=7.5 Score=37.62 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=24.6
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|-++|||+-. +|+|+. +++.|.+.|.+|...
T Consensus 7 K~alVTGaa~~~GIG~a-----iA~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFG-----VAKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHH-----HHHHHHHCCCEEEEE
Confidence 7899996543 488865 678899999999874
No 185
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=56.82 E-value=7 Score=38.90 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=26.4
Q ss_pred EEEEEeCCc-cCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGV-VSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv-~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||||- .||||+. +++.|.++|++|...=
T Consensus 10 k~~lVTGa~~s~GIG~a-----ia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWA-----IAKHLASAGARVALGT 42 (315)
T ss_dssp CEEEEECCSSSSSHHHH-----HHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCCCCChHHH-----HHHHHHHCCCEEEEEe
Confidence 789999875 8999975 6778888999998763
No 186
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=56.51 E-value=6.8 Score=36.80 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
+|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 2 ~k~vlITGa-s~gIG~-----~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 2 MKVAVITGA-SRGIGE-----AIARALARDGYALALGA 33 (235)
T ss_dssp CCEEEEESC-SSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEe
Confidence 588999965 578876 46788888999987753
No 187
>3pzx_A Formate--tetrahydrofolate ligase; HET: TOE; 2.20A {Moorella thermoacetica} SCOP: c.37.1.10 PDB: 1fp7_A 1fpm_A* 3qb6_A* 3qus_A* 3rbo_A* 3sin_A* 1eg7_A
Probab=56.40 E-value=12 Score=40.73 Aligned_cols=46 Identities=30% Similarity=0.405 Sum_probs=38.0
Q ss_pred EEEEEeCCccC---CCchHHHHHHHHHHHHHCCCeeeEeec----CccccCCCC
Q 008567 2 KYVLVTGGVVS---GLGKGVTASSVGVVLKACGLRVTSIKI----DPYLNTDAG 48 (561)
Q Consensus 2 k~i~v~ggv~S---~~GKg~~~~s~~~ll~~~g~~v~~~K~----dpyln~d~g 48 (561)
|+|+|| +... |-||+.++..|+..|...|.+|-.+=- -|+++++.|
T Consensus 58 K~IlVT-S~~PTP~GEGKSTtsinLA~alA~~GkkVLLiLR~Psl~~~FGikgg 110 (557)
T 3pzx_A 58 KLILVT-AITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREPSLGPSFGIKGG 110 (557)
T ss_dssp EEEEEE-ESCCCTTCCCHHHHHHHHHHHHHHTTCCEEEEECCCCSHHHHHTCCC
T ss_pred cEEEEE-cCCCCCCCCCchhHHHHHHHHHHHcCCeEEEEeCCCCccccCCCCCC
Confidence 899999 7777 999999999999999999999988732 245555554
No 188
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=56.33 E-value=8.6 Score=34.56 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=20.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|. ||.||+.++..|+..|
T Consensus 6 ~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57889965 9999999998888766
No 189
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=56.27 E-value=12 Score=39.12 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=29.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|-|| |+ =|||.+++-|..+|++.|++|..+..
T Consensus 50 ~vI~VT-GT---nGKtTT~~~l~~iL~~~G~~~g~~~s 83 (422)
T 1w78_A 50 FVFTVA-GT---NGKGTTCRTLESILMAAGYKVGVYSS 83 (422)
T ss_dssp EEEEEE-CS---SCHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cEEEEe-CC---cChHHHHHHHHHHHHHCCCCEEEECC
Confidence 678888 43 79999999999999999999987654
No 190
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=56.10 E-value=8.4 Score=37.36 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=25.9
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||||.. +|+|+. +++.|.++|++|...-.
T Consensus 7 k~vlVTGas~~~gIG~~-----~a~~l~~~G~~V~~~~r 40 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYG-----IAQSCFNQGATLAFTYL 40 (275)
T ss_dssp CEEEEECCCSTTSHHHH-----HHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCCCCcHHHH-----HHHHHHHCCCEEEEEeC
Confidence 6899997763 899975 67778889999887533
No 191
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=55.79 E-value=14 Score=38.09 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=30.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
..|.+.| .+|.||..+++.|+.+++..|-+|...-.|
T Consensus 158 ~vi~lvG--~nGsGKTTll~~Lag~l~~~~G~V~l~g~D 194 (359)
T 2og2_A 158 AVIMIVG--VNGGGKTTSLGKLAHRLKNEGTKVLMAAGD 194 (359)
T ss_dssp EEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred eEEEEEc--CCCChHHHHHHHHHhhccccCCEEEEeccc
Confidence 4678885 499999999999999999988888765443
No 192
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=55.67 E-value=10 Score=36.42 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=19.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK 28 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~ 28 (561)
..|.|||+ ||.||+.+|..|...|.
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLLG 47 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHhh
Confidence 46889976 67799988887776553
No 193
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=55.37 E-value=6.8 Score=38.31 Aligned_cols=32 Identities=34% Similarity=0.450 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|| |-.||+|+. +++.|.+.|.+|...-.
T Consensus 3 K~vlVT-Gas~GIG~a-----ia~~la~~Ga~V~~~~~ 34 (247)
T 3ged_A 3 RGVIVT-GGGHGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEE-STTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEe-cCCCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999 557899974 78889999999988544
No 194
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.24 E-value=8.6 Score=37.95 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=24.6
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||||.. +|+|+. +++.|.++|++|...
T Consensus 32 k~~lVTGasg~~GIG~a-----ia~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWG-----IAKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHH-----HHHHHHHCCCEEEEE
Confidence 7899997765 678875 677888999998764
No 195
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=55.18 E-value=9.4 Score=36.89 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=25.7
Q ss_pred EEEEEeCCc-cCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGV-VSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv-~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||||. .+|+|+. +++.|.++|++|...=
T Consensus 8 k~vlVTGa~~s~gIG~a-----ia~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFH-----IARVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHH-----HHHHHHHCCCEEEEEe
Confidence 679999774 8999975 6677888999987753
No 196
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=55.01 E-value=13 Score=34.25 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
..|.|+|+ ||.||+.++..|+.++.. ++..+-.|+|
T Consensus 7 ~~i~i~G~--~GsGKSTl~~~l~~~~~~---~i~~v~~d~~ 42 (211)
T 3asz_A 7 FVIGIAGG--TASGKTTLAQALARTLGE---RVALLPMDHY 42 (211)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHHHHGG---GEEEEEGGGC
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHhCC---CeEEEecCcc
Confidence 46788876 688999999999998853 3444444443
No 197
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=54.69 E-value=9.4 Score=36.48 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=26.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
++|.+.|. +|.||+..+..|...|.. |++|..
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~~ 58 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVIM 58 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCcee
Confidence 68889964 799999999999999988 876643
No 198
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=54.69 E-value=69 Score=32.27 Aligned_cols=138 Identities=18% Similarity=0.192 Sum_probs=75.4
Q ss_pred CccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhh
Q 008567 190 GEQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQ 269 (561)
Q Consensus 190 ~e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~ 269 (561)
.=.|--+...+++-|.+.| +|+|++|.... ...+.++..+.+| ||+.-|-+ .+.=+..|-+
T Consensus 74 s~~kgEsl~DTarvLs~~~--~D~iviR~~~~---~~~~~la~~~~vP---VINagdg~-~~HPtQaLaD---------- 134 (304)
T 3r7f_A 74 SVQKGETLYDTIRTLESIG--VDVCVIRHSED---EYYEELVSQVNIP---ILNAGDGC-GQHPTQSLLD---------- 134 (304)
T ss_dssp TSCSSSCHHHHHHHHHHHT--CCEEEEECSST---TCHHHHHHHCSSC---EEESCCTT-SCCHHHHHHH----------
T ss_pred cCCCCCCHHHHHHHHHHhc--CCEEEEecCCh---hHHHHHHHhCCCC---EEeCCCCC-CcCcHHHHHH----------
Confidence 3345567778888888876 59999998753 3344555555554 77775422 2232222221
Q ss_pred cCCCccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCC
Q 008567 270 LNLLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLT 349 (561)
Q Consensus 270 l~l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d 349 (561)
+.. +.+... .-+++||+++||... ...-.|.+.++...|+++.+ +.|+.+..+...
T Consensus 135 -----------l~T---i~e~~g-~l~glkva~vGD~~~-~rva~Sl~~~~~~~G~~v~~------~~P~~~~~~~~~-- 190 (304)
T 3r7f_A 135 -----------LMT---IYEEFN-TFKGLTVSIHGDIKH-SRVARSNAEVLTRLGARVLF------SGPSEWQDEENT-- 190 (304)
T ss_dssp -----------HHH---HHHHHS-CCTTCEEEEESCCTT-CHHHHHHHHHHHHTTCEEEE------ESCGGGSCTTCS--
T ss_pred -----------HHH---HHHHhC-CCCCCEEEEEcCCCC-cchHHHHHHHHHHcCCEEEE------ECCCccCcchhh--
Confidence 111 111111 124689999998621 11237888888888876544 455544331100
Q ss_pred CcchhhHHHhccCCCeEEEcC
Q 008567 350 PKDHAAAWETLRNAECVLVPG 370 (561)
Q Consensus 350 ~~~~~~~~~~l~~~DGIilpG 370 (561)
...+++..+.++++|-|...-
T Consensus 191 ~g~~~d~~eav~~aDvvyt~~ 211 (304)
T 3r7f_A 191 FGTYVSMDEAVESSDVVMLLR 211 (304)
T ss_dssp SCEECCHHHHHHHCSEEEECC
T ss_pred cCccCCHHHHhCCCCEEEecc
Confidence 001223345567778766543
No 199
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=54.60 E-value=7.4 Score=37.35 Aligned_cols=31 Identities=29% Similarity=0.314 Sum_probs=24.8
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||||.. +|+|+ ++++.|.++|++|...
T Consensus 21 k~vlITGas~~~giG~-----~~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGI-----EAARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHH-----HHHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHH-----HHHHHHHHCCCeEEEE
Confidence 6799997765 88886 4678888999998764
No 200
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=54.38 E-value=12 Score=34.81 Aligned_cols=28 Identities=29% Similarity=0.332 Sum_probs=19.8
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeee
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVT 35 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~ 35 (561)
.|.+||| +|-||+.++..|...| |+.|.
T Consensus 14 iIgltG~--~GSGKSTva~~L~~~l---g~~vi 41 (192)
T 2grj_A 14 VIGVTGK--IGTGKSTVCEILKNKY---GAHVV 41 (192)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHH---CCEEE
T ss_pred EEEEECC--CCCCHHHHHHHHHHhc---CCEEE
Confidence 5789988 6779987776666543 76553
No 201
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=54.23 E-value=14 Score=37.62 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=29.2
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHH--CCCeeeEeecCcc
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKA--CGLRVTSIKIDPY 42 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~--~g~~v~~~K~dpy 42 (561)
.|.|+|+ ||.||+.++..|..+|+. .+-+|..+-.|.|
T Consensus 94 iigI~Gp--sGSGKSTl~~~L~~ll~~~~~~~~v~~i~~D~f 133 (321)
T 3tqc_A 94 IIGIAGS--VAVGKSTTSRVLKALLSRWPDHPNVEVITTDGF 133 (321)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred EEEEECC--CCCCHHHHHHHHHHHhcccCCCCeEEEEeeccc
Confidence 6788875 688999999999999974 3456666666654
No 202
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=54.19 E-value=41 Score=34.27 Aligned_cols=44 Identities=30% Similarity=0.334 Sum_probs=29.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc---cccCCCCCCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP---YLNTDAGTMSP 52 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp---yln~d~g~msp 52 (561)
|.|+|+|. ||.||+.+|..|+.-+ ....+-.|- |-.+|-||=.|
T Consensus 4 ~~i~i~Gp--tgsGKt~la~~La~~~-----~~~iis~Ds~QvYr~~~igTakp 50 (322)
T 3exa_A 4 KLVAIVGP--TAVGKTKTSVMLAKRL-----NGEVISGDSMQVYRGMDIGTAKI 50 (322)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHTT-----TEEEEECCGGGGBTTCCTTTTCC
T ss_pred cEEEEECC--CcCCHHHHHHHHHHhC-----ccceeecCcccceeeeeecCCCC
Confidence 57888875 5779998777776533 334455554 67777788777
No 203
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=53.90 E-value=12 Score=39.12 Aligned_cols=33 Identities=42% Similarity=0.650 Sum_probs=28.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.|-|| |+ -|||.+++-|..+|++.|++|..+-
T Consensus 40 ~vI~Vt-GT---nGKtTT~~~l~~iL~~~G~~vg~~~ 72 (428)
T 1jbw_A 40 RYIHVT-GT---NGKGSAANAIAHVLEASGLTVGLYT 72 (428)
T ss_dssp CEEEEE-CS---SCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEE-CC---CChHHHHHHHHHHHHHCCCCEEEEe
Confidence 578888 43 7999999999999999999997653
No 204
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=53.78 E-value=10 Score=36.41 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=25.7
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++||||.. +|+|+. +++.|.++|++|...-.
T Consensus 10 k~vlVTGas~~~gIG~~-----ia~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYG-----IAQAMHREGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCCHHHH-----HHHHHHHCCCEEEEEcC
Confidence 6799997764 899964 67778889999887533
No 205
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=53.48 E-value=7 Score=37.46 Aligned_cols=31 Identities=39% Similarity=0.438 Sum_probs=24.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+|.++|| |..||+|+ ++++.|.++|++|...
T Consensus 7 ~k~vlVT-Gas~gIG~-----~~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALIT-AGTKGLGK-----QVTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEET-TTTSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred cCEEEEe-CCCchhHH-----HHHHHHHHCCCEEEEE
Confidence 4789999 45588885 5778888899998764
No 206
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=53.28 E-value=39 Score=31.62 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=21.9
Q ss_pred cC-CCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RN-AECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~-~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.+ +||||+.+.... . ....++.+.+.++|+.-+
T Consensus 57 ~~~vdgii~~~~~~~-~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 57 QAPPDALILAPNSAE-D---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HSCCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEE
T ss_pred hCCCCEEEEeCCCHH-H---HHHHHHHHHHCCCcEEEE
Confidence 36 999999874221 1 234556677789998766
No 207
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=53.28 E-value=8.2 Score=36.67 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=25.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
+|-++||| -.||+|+ ++++.|.++|++|...-.
T Consensus 3 ~k~vlVTG-as~GIG~-----a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTG-AGSGLGR-----ALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEES-TTSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC-CCCHHHH-----HHHHHHHHCCCEEEEEEC
Confidence 37899995 4588886 467788899999887533
No 208
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=53.01 E-value=9.3 Score=36.73 Aligned_cols=32 Identities=31% Similarity=0.320 Sum_probs=24.8
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||||.. +|+|+. +++.|.++|++|...=
T Consensus 9 k~vlVTGas~~~gIG~~-----ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFA-----IAAKLKEAGAEVALSY 41 (261)
T ss_dssp CEEEEESCCSSSSHHHH-----HHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHH-----HHHHHHHCCCEEEEEc
Confidence 6799998764 899975 5667777899987753
No 209
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=52.87 E-value=9.3 Score=35.04 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=19.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|+ ||.||+.++..|+..|
T Consensus 19 ~~I~l~G~--~GsGKSTla~~L~~~l 42 (202)
T 3t61_A 19 GSIVVMGV--SGSGKSSVGEAIAEAC 42 (202)
T ss_dssp SCEEEECS--TTSCHHHHHHHHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHh
Confidence 46888964 8899999999888776
No 210
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=52.86 E-value=40 Score=33.84 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=71.8
Q ss_pred cccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhc-ccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhc
Q 008567 192 QKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEK-LSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQL 270 (561)
Q Consensus 192 ~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~k-isl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l 270 (561)
.|--+...+++-|.+.+ +|+|++|....-. ... ++..+.+ .||+.-+-+. ++=+..|-
T Consensus 74 ~kgEsl~DTarvls~~~--~D~iviR~~~~~~---~~~~la~~~~v---PVINAG~g~~-~HPtQaLa------------ 132 (291)
T 3d6n_B 74 VKGESFFDTLKTFEGLG--FDYVVFRVPFVFF---PYKEIVKSLNL---RLVNAGDGTH-QHPSQGLI------------ 132 (291)
T ss_dssp CTTCCHHHHHHHHHHTT--CSEEEEEESSCCC---SCHHHHHTCSS---EEEEEEETTT-BCHHHHHH------------
T ss_pred cCCCcHHHHHHHHHHhc--CCEEEEEcCChHH---HHHHHHHhCCC---CEEeCccCCC-cCcHHHHH------------
Confidence 45567778888887776 5999999875322 233 4444444 3666333222 23222222
Q ss_pred CCCccCCCCChhHHHHHHhhhcCCCCceEEEEEec--cCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccC
Q 008567 271 NLLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGK--YVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKL 348 (561)
Q Consensus 271 ~l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgk--y~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~ 348 (561)
++.. +.+.. ..-++++|+++|| ++.. -.|.+.++...|+++.+ +.|+.+.......
T Consensus 133 ---------Dl~T---i~e~~-g~l~gl~va~vGDl~~~rv---a~Sl~~~~~~~g~~v~~------~~P~~~~p~~~~~ 190 (291)
T 3d6n_B 133 ---------DFFT---IKEHF-GEVKDLRVLYVGDIKHSRV---FRSGAPLLNMFGAKIGV------CGPKTLIPRDVEV 190 (291)
T ss_dssp ---------HHHH---HHHHH-SCCTTCEEEEESCCTTCHH---HHHHHHHHHHTTCEEEE------ESCGGGSCTTGGG
T ss_pred ---------HHHH---HHHHh-CCcCCcEEEEECCCCCCch---HHHHHHHHHHCCCEEEE------ECCchhCCchHHH
Confidence 1111 11111 1124689999999 5333 37888899888887654 4555443321100
Q ss_pred -CCcchhhHHHhccCCCeEEE
Q 008567 349 -TPKDHAAAWETLRNAECVLV 368 (561)
Q Consensus 349 -d~~~~~~~~~~l~~~DGIil 368 (561)
...-+++..+.++++|-|..
T Consensus 191 ~g~~~~~d~~eav~~aDvvy~ 211 (291)
T 3d6n_B 191 FKVDVFDDVDKGIDWADVVIW 211 (291)
T ss_dssp GCEEEESSHHHHHHHCSEEEE
T ss_pred CCCEEEcCHHHHhCCCCEEEE
Confidence 00012333455677887766
No 211
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.79 E-value=9.8 Score=37.53 Aligned_cols=31 Identities=23% Similarity=0.212 Sum_probs=24.7
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||||.. +|+|+. |++.|.++|++|...
T Consensus 31 k~vlVTGasg~~GIG~~-----ia~~la~~G~~V~~~ 62 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWG-----IAKAVCAQGAEVALT 62 (296)
T ss_dssp CEEEEECCCSTTSHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEEeCCCCCCHHHH-----HHHHHHHCCCEEEEE
Confidence 7899998765 588865 677788899998774
No 212
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=52.66 E-value=9.8 Score=36.16 Aligned_cols=31 Identities=26% Similarity=0.134 Sum_probs=23.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 1 ~k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHA-RHFAGPA-----AVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESST-TSTTHHH-----HHHHHHHTTCEEEEC
T ss_pred CCEEEEECC-CChHHHH-----HHHHHHHCCCEEEEe
Confidence 478999955 6899975 667788899998764
No 213
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=52.55 E-value=9.4 Score=35.82 Aligned_cols=33 Identities=30% Similarity=0.507 Sum_probs=24.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||-|+|||| .+++|+. +++.|.++|++|..+-.
T Consensus 1 Mk~vlVtGa-sg~iG~~-----l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITGS-ASGIGAA-----LKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCC-CcHHHHH-----HHHHHHhCCCEEEEEeC
Confidence 688999955 4777754 56677788999988644
No 214
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=52.10 E-value=45 Score=32.81 Aligned_cols=81 Identities=12% Similarity=0.015 Sum_probs=50.8
Q ss_pred eEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCCch
Q 008567 298 VRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDRGV 377 (561)
Q Consensus 298 ~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~~~ 377 (561)
++|.+|+.- ...+.-..+.++|+..|+++.+ +++.++.. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~-~~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDT-SLETAAGYLAGLMTSWQWEFDY------IPSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESS-CTTTTHHHHHHHHHHTTCCCEE------ECTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCC-CchhHHHHHHHHHHhCCceEEE------eccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 578888632 1122235688899999988755 56554421 11 67899999999863221112
Q ss_pred hHHHHHHHHHHHcCCCEEEE
Q 008567 378 GGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 378 ~g~i~~ir~a~e~~iPvLGI 397 (561)
+..+++++..++++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 55677888877777666655
No 215
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=51.79 E-value=15 Score=37.78 Aligned_cols=35 Identities=31% Similarity=0.294 Sum_probs=29.0
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
.++|+| .||.||+.++..+...+...|.+|..+ ||
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~~--D~ 71 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVIII--DP 71 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEE--ES
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEEE--eC
Confidence 467885 589999999999999888999888774 66
No 216
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=50.73 E-value=74 Score=33.44 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc---cccCCCCCCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP---YLNTDAGTMSP 52 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp---yln~d~g~msp 52 (561)
|.|+|+| -||.||+.+|..|+..|. . ..+-.|- |-.+|-||=.|
T Consensus 3 ~~i~i~G--ptgsGKttla~~La~~~~---~--~iis~Ds~QvYr~l~i~T~kp 49 (409)
T 3eph_A 3 KVIVIAG--TTGVGKSQLSIQLAQKFN---G--EVINSDSMQVYKDIPIITNKH 49 (409)
T ss_dssp EEEEEEE--CSSSSHHHHHHHHHHHHT---E--EEEECCTTTTBSSCTTTTTCC
T ss_pred cEEEEEC--cchhhHHHHHHHHHHHCC---C--eEeecCccceecccccccCCC
Confidence 5788886 578899988888877652 2 2344443 55555565555
No 217
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=50.39 E-value=13 Score=34.29 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
|| |+||||. +++| +.+++.|.++|++|..+-.+|
T Consensus 1 M~-ilItGat-G~iG-----~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVG-----KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHH-----HHHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHH-----HHHHHHHHHCCCEEEEEECCc
Confidence 55 8899654 5666 567777888999999876643
No 218
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=50.32 E-value=14 Score=39.00 Aligned_cols=33 Identities=36% Similarity=0.447 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.|-|| |+ =|||.+++-|..+|++.|++|..+.
T Consensus 53 ~vI~VT-GT---nGKtTT~~~l~~iL~~~G~~vg~~~ 85 (442)
T 1o5z_A 53 KTIHIG-GT---NGKGSVANMVSNILVSQGYRVGSYY 85 (442)
T ss_dssp EEEEEE-CS---SSHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEE-CC---cCHHHHHHHHHHHHHHCCCCEEEEC
Confidence 678888 43 7999999999999999999998754
No 219
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=50.32 E-value=11 Score=36.06 Aligned_cols=32 Identities=34% Similarity=0.455 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ +|++.|.++|++|...-.
T Consensus 23 k~vlITGa-s~gIG~-----~la~~l~~~G~~V~~~~r 54 (251)
T 3orf_A 23 KNILVLGG-SGALGA-----EVVKFFKSKSWNTISIDF 54 (251)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 77999955 578886 577888899999988654
No 220
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=50.26 E-value=24 Score=34.08 Aligned_cols=25 Identities=24% Similarity=0.171 Sum_probs=20.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
|+.|+|+|. +|.||+.+|..|+..|
T Consensus 1 M~li~I~G~--~GSGKSTla~~La~~~ 25 (253)
T 2ze6_A 1 MLLHLIYGP--TCSGKTDMAIQIAQET 25 (253)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHhcC
Confidence 688899964 8899999999988755
No 221
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=50.04 E-value=14 Score=32.20 Aligned_cols=29 Identities=38% Similarity=0.484 Sum_probs=21.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
+.|+++|. +|.||+.++..| +..|+.+..
T Consensus 2 ~~I~l~G~--~GsGKsT~a~~L----~~~g~~~i~ 30 (179)
T 3lw7_A 2 KVILITGM--PGSGKSEFAKLL----KERGAKVIV 30 (179)
T ss_dssp CEEEEECC--TTSCHHHHHHHH----HHTTCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHH----HHCCCcEEE
Confidence 46888864 788999877766 777877543
No 222
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=49.98 E-value=7.8 Score=36.37 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+|.|+|||| .+|+|+. +++.|.++|++|...
T Consensus 1 ~k~vlITGa-sggiG~~-----~a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGA-SRGIGRA-----IALRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTT-TSHHHHH-----HHHHHHTTTCEEEEE
T ss_pred CCEEEEeCC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 588999965 5788865 667778899988764
No 223
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=49.95 E-value=10 Score=36.09 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCe-eeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLR-VTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~-v~~~K 38 (561)
|-++|||| .+|+|+. +++.|.++|++ |...-
T Consensus 6 k~vlVtGa-s~gIG~~-----~a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLD-----TSRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHH-----HHHHHHHCCCcEEEEEe
Confidence 67999977 5888864 67778889997 76643
No 224
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=49.88 E-value=8.5 Score=37.22 Aligned_cols=29 Identities=38% Similarity=0.448 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++||| ..||+|+ ++++.|.++|++|..
T Consensus 27 k~vlITG-as~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTG-GSRGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETT-TTSHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEEC-CCchHHH-----HHHHHHHHCCCEEEE
Confidence 6899995 5688886 577888889999865
No 225
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=49.50 E-value=9.4 Score=37.04 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| -.||+|+. +++.|.++|++|...-.
T Consensus 12 k~~lVTG-as~GIG~a-----~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITG-AARGQGRA-----HAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEES-TTSHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-CccHHHHH-----HHHHHHHcCCEEEEEec
Confidence 7899995 45888865 67788899999987633
No 226
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.42 E-value=11 Score=36.81 Aligned_cols=32 Identities=31% Similarity=0.545 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|| |-.||+|+. +++.|.+.|.+|...-.
T Consensus 12 K~alVT-Gas~GIG~a-----ia~~la~~Ga~Vv~~~~ 43 (242)
T 4b79_A 12 QQVLVT-GGSSGIGAA-----IAMQFAELGAEVVALGL 43 (242)
T ss_dssp CEEEEE-TTTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 779999 456899865 78899999999988644
No 227
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=48.92 E-value=68 Score=30.29 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=22.7
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 60 QKPDAIIEQLGNL----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HCCSEEEEESSCH----HHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCCh----hhhHHHHHHHHHCCCcEEEe
Confidence 5899999876421 22345567777889998765
No 228
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=48.82 E-value=11 Score=37.85 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=25.2
Q ss_pred EEEEEeCCcc-CCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVV-SGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~-S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||+-. ||||+. +++.|.++|++|...=
T Consensus 3 k~~lITGas~~~GIG~a-----iA~~la~~G~~Vv~~~ 35 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWG-----IAKELSKRNVKIIFGI 35 (329)
T ss_dssp CEEEEECCSSSSSHHHH-----HHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCCCCchHHH-----HHHHHHHCCCEEEEEe
Confidence 7899997653 599975 6778889999998543
No 229
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=48.72 E-value=9.9 Score=37.28 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|| |-.||+|+. +++.|.+.|.+|...-.
T Consensus 8 KvalVT-Gas~GIG~a-----iA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVT-GAGSGIGRA-----IAKKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEE-TTTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCCHHHHH-----HHHHHHHcCCEEEEEEC
Confidence 789999 557899876 67788899999987544
No 230
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=48.65 E-value=11 Score=36.09 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+ ++++.|.++|++|...=.
T Consensus 8 k~vlVTGa-s~GIG~-----aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGA-GDYIGA-----EIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECC-SSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCEEEEEeC
Confidence 67999955 588886 577788889999887533
No 231
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=48.64 E-value=54 Score=31.92 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=51.0
Q ss_pred ceEEEEEeccC--CCcccHH---------HHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCe
Q 008567 297 SVRIAMVGKYV--GLADSYL---------SVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAEC 365 (561)
Q Consensus 297 ~~~Iavvgky~--~~~DaY~---------Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DG 365 (561)
.+||.|.++|. +..++-. -+.+.|+..|+.+.+ +..++.+.. .+ .+.|+++|.
T Consensus 7 ~~~vlv~~~~~h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~------~t~dd~~~~---~~-------~~~L~~~Dv 70 (252)
T 1t0b_A 7 PIRVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAAT------AVLDEPEHG---LT-------DEVLDRCDV 70 (252)
T ss_dssp CCEEEEEECCCHHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEE------EESSSGGGG---CC-------HHHHHTCSE
T ss_pred CcEEEEECCccccccchhhhccCchHHHHHHHHHHhhCCcEEEE------EeccCcccc---CC-------HhHHhcCCE
Confidence 47898888773 0101001 136778888877654 221121110 01 156899999
Q ss_pred EEEcCC-CCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008567 366 VLVPGG-FGDRGVGGMILAAKYARENNIPYLGICLG 400 (561)
Q Consensus 366 IilpGG-~G~~~~~g~i~~ir~a~e~~iPvLGICLG 400 (561)
||+-|- .+..-.+...++++..++++.+++||=-|
T Consensus 71 vV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 71 LVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp EEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred EEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 998431 12112245567788888899999999555
No 232
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=48.44 E-value=14 Score=33.07 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=19.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
++.|+++|+ +|.||+.++..|+..|
T Consensus 6 ~~~I~l~G~--~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGG--PGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEES--TTSSHHHHHHHHHHHH
T ss_pred CcEEEEECC--CCCCHHHHHHHHHHHh
Confidence 368999975 7889998888777655
No 233
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=48.42 E-value=12 Score=35.75 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| -.+|+|+. +++.|.++|++|...-.
T Consensus 8 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITG-GANGIGRA-----IAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEET-TTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCcHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 6799995 46888864 66778889999887543
No 234
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.28 E-value=18 Score=33.30 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=26.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||-|+||||. |-+.+.|.+.|.++|++|..+-.
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVR 36 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECS
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEc
Confidence 4569999765 66667888899999999988655
No 235
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=48.26 E-value=12 Score=36.22 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| -.+|+|+. +++.|.++|++|...-.
T Consensus 9 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~r 40 (264)
T 2dtx_A 9 KVVIVTG-ASMGIGRA-----IAERFVDEGSKVIDLSI 40 (264)
T ss_dssp CEEEEES-CSSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCCHHHHH-----HHHHHHHCCCEEEEEec
Confidence 6799995 45888865 67788889999987654
No 236
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=48.18 E-value=16 Score=40.71 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
+.|+++| +||.||+.++..|...|.++|+.+..+
T Consensus 53 ~lIvLtG--lsGSGKSTlAr~La~~L~~~G~~~v~l 86 (630)
T 1x6v_B 53 CTVWLTG--LSGAGKTTVSMALEEYLVCHGIPCYTL 86 (630)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEe--CCCCCHHHHHHHHHHHHHhcCCeEEEe
Confidence 4788995 599999999999999999999887654
No 237
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=48.13 E-value=47 Score=33.45 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=76.6
Q ss_pred cccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhcC
Q 008567 192 QKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQLN 271 (561)
Q Consensus 192 ~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~ 271 (561)
.|--+...+++-|.+. .|+|++|... ......++..+.+ .||+.-+ +.++=+..|-+
T Consensus 85 ~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~la~~~~v---PVINa~~--~~~HPtQaLaD------------ 141 (301)
T 2ef0_A 85 GEREPVRDVAKNLERF---VEGIAARVFR---HETVEALARHAKV---PVVNALS--DRAHPLQALAD------------ 141 (301)
T ss_dssp TTCCCHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHCSS---CEEEEEC--SSCCHHHHHHH------------
T ss_pred CCCCchHHHHHHHHHh---CCEEEEecCC---hHHHHHHHHHCCC---CEEeCCC--CccCchHHHHH------------
Confidence 3555677777877666 5999999863 4555666666655 4777654 44343333321
Q ss_pred CCccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcccccccCC--
Q 008567 272 LLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDESAKLT-- 349 (561)
Q Consensus 272 l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d-- 349 (561)
+... .+.. ..-++++|+++||.... -.|.+.++...|+++.+ +.|+.+.....-.+
T Consensus 142 ---------l~Ti---~e~~-g~l~gl~ia~vGD~~rv---a~Sl~~~~~~~g~~v~~------~~P~~~~~~~~~~~~~ 199 (301)
T 2ef0_A 142 ---------LLTL---KEVF-GGLAGLEVAWVGDGNNV---LNSLLEVAPLAGLKVRV------ATPKGYEPDPGLLKRA 199 (301)
T ss_dssp ---------HHHH---HHHH-SCCTTCEEEEESCCCHH---HHHHHHHHHHHTCEEEE------ECCTTCCCCHHHHHHH
T ss_pred ---------HHHH---HHHh-CCcCCcEEEEECCCchh---HHHHHHHHHHcCCEEEE------ECCchhcCCHHHHhhc
Confidence 1111 1111 11246899999997333 37888898888887654 56666543210000
Q ss_pred -CcchhhHHHhccCCCeEEEcC
Q 008567 350 -PKDHAAAWETLRNAECVLVPG 370 (561)
Q Consensus 350 -~~~~~~~~~~l~~~DGIilpG 370 (561)
..-+++..+.++++|-|...-
T Consensus 200 ~~~~~~d~~eav~~aDvvy~~~ 221 (301)
T 2ef0_A 200 NAFFTHDPKEAALGAHALYTDV 221 (301)
T ss_dssp TCEEESCHHHHHTTCSEEEECC
T ss_pred eeEEECCHHHHhcCCCEEEecC
Confidence 001233445678889766543
No 238
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=48.06 E-value=9.5 Score=37.06 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||||+. +++.|.++|++|...
T Consensus 13 k~vlITGa-s~GIG~~-----~a~~L~~~G~~V~~~ 42 (311)
T 3o26_A 13 RCAVVTGG-NKGIGFE-----ICKQLSSNGIMVVLT 42 (311)
T ss_dssp CEEEESSC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred cEEEEecC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 68999955 4888874 677788899998764
No 239
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=48.03 E-value=9.9 Score=36.92 Aligned_cols=31 Identities=26% Similarity=0.473 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||||+ ++++.|.++|++|...-
T Consensus 17 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGA-SSGIGE-----AIARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCCEEEEE
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEE
Confidence 68999955 588886 46788889999988753
No 240
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=47.97 E-value=13 Score=35.45 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 1 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~ 30 (248)
T 3asu_A 1 MIVLVTGA-TAGFGEC-----ITRRFIQQGHKVIAT 30 (248)
T ss_dssp CEEEETTT-TSTTHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCEEEEE
Confidence 56899955 6999975 677788899998875
No 241
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.72 E-value=10 Score=36.64 Aligned_cols=32 Identities=44% Similarity=0.592 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+ ++++.|.++|++|..+-.
T Consensus 11 k~vlVTGa-s~gIG~-----~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGG-ARGQGR-----SHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCC-CChHHH-----HHHHHHHHCCCeEEEEcc
Confidence 78999955 578886 577888899999988644
No 242
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=47.72 E-value=9.2 Score=36.38 Aligned_cols=29 Identities=38% Similarity=0.666 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++|||| .+|+|+ ++++.|.++|++|..
T Consensus 14 k~vlITGa-s~giG~-----~ia~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGG-MGGIGT-----SICQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTT-TSHHHH-----HHHHHHHHTTEEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEE
Confidence 78999955 588886 467788889998865
No 243
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=47.60 E-value=11 Score=36.59 Aligned_cols=32 Identities=38% Similarity=0.501 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||| -.||+|+. +++.|.++|++|...-.
T Consensus 15 k~vlVTG-as~GIG~a-----ia~~l~~~G~~V~~~~r 46 (269)
T 3vtz_A 15 KVAIVTG-GSSGIGLA-----VVDALVRYGAKVVSVSL 46 (269)
T ss_dssp CEEEESS-TTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 7799995 55888864 67788889999987643
No 244
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=47.57 E-value=11 Score=37.51 Aligned_cols=30 Identities=33% Similarity=0.437 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||||+. +++.|.+.|.+|...
T Consensus 30 KvalVTGa-s~GIG~a-----iA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLA-----AAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCc-CCHHHHH-----HHHHHHHCCCEEEEE
Confidence 68999955 7899975 678899999999874
No 245
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=47.50 E-value=9.8 Score=37.33 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|| |-.||+|+. +++.|.+.|.+|...-
T Consensus 12 K~alVT-Gas~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALIT-AGTKGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEES-CCSSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEe-ccCcHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999 556899865 6788999999997643
No 246
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=47.44 E-value=21 Score=31.61 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=27.7
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
.++++|. +|.||..++.+|+..+...|+++.-+..
T Consensus 38 ~~~l~G~--~G~GKTtL~~~i~~~~~~~g~~~~~~~~ 72 (149)
T 2kjq_A 38 FIYVWGE--EGAGKSHLLQAWVAQALEAGKNAAYIDA 72 (149)
T ss_dssp EEEEESS--STTTTCHHHHHHHHHHHTTTCCEEEEET
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHhcCCcEEEEcH
Confidence 4677754 8999999999999999888876654433
No 247
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=47.43 E-value=18 Score=35.08 Aligned_cols=30 Identities=30% Similarity=0.419 Sum_probs=23.2
Q ss_pred EEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 4 VLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 4 i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|+||||. |-+.+.|++.|.++|++|..+-.
T Consensus 3 vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 3 IVVTGGA------GFIGSHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEECCC------ChHHHHHHHHHHhCCCEEEEEeC
Confidence 8999764 45557788888899999988644
No 248
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=47.30 E-value=21 Score=34.77 Aligned_cols=70 Identities=10% Similarity=0.044 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcCCCCCC------------chhHHH
Q 008567 314 LSVVKALLHACIACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPGGFGDR------------GVGGMI 381 (561)
Q Consensus 314 ~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpGG~G~~------------~~~g~i 381 (561)
..+.++|+..++++.+ +.+.+. +..+....+.|.++|.||+.+-.... ..+...
T Consensus 43 ~~l~~aL~~~~~~v~~------~~~~~~--------~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~ 108 (256)
T 2gk3_A 43 TWLLECLRKGGVDIDY------MPAHTV--------QIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNAL 108 (256)
T ss_dssp HHHHHHHHHTTCEEEE------ECHHHH--------HHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHH
T ss_pred HHHHHHHHhcCceEEE------Eecccc--------hhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHHH
Confidence 4588899988776544 321100 00000112578899999999843210 114567
Q ss_pred HHHHHHHHcCCCEEEE
Q 008567 382 LAAKYARENNIPYLGI 397 (561)
Q Consensus 382 ~~ir~a~e~~iPvLGI 397 (561)
++++..++++..+++|
T Consensus 109 ~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 109 ESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCEEEEE
Confidence 8888888899999999
No 249
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=47.14 E-value=21 Score=32.42 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=30.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
+-|+++|. +|.||..++.+|+..+...|++|..+.+
T Consensus 55 ~~~~l~G~--~GtGKT~la~~i~~~~~~~~~~~~~~~~ 90 (202)
T 2w58_A 55 KGLYLHGS--FGVGKTYLLAAIANELAKRNVSSLIVYV 90 (202)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred CeEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEh
Confidence 56889975 6999999999999999999988876544
No 250
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=47.06 E-value=10 Score=36.17 Aligned_cols=30 Identities=40% Similarity=0.542 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 7 k~vlVTGa-s~gIG~-----a~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGA-AQGIGK-----AIAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEE
Confidence 78999955 588886 5778888999998874
No 251
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=46.97 E-value=17 Score=32.59 Aligned_cols=24 Identities=25% Similarity=0.396 Sum_probs=19.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
++|+++| .+|.||+.++..|+..|
T Consensus 6 ~~I~l~G--~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 6 ALIIVTG--HPATGKTTLSQALATGL 29 (193)
T ss_dssp EEEEEEE--STTSSHHHHHHHHHHHH
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHc
Confidence 5788885 48999999998888766
No 252
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=46.88 E-value=14 Score=31.72 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
+.|+|+|+ |-+..++++.|.++|++|..+-.|
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECC
Confidence 45778853 347789999999999999886653
No 253
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=46.84 E-value=9.8 Score=36.02 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.|+|||| .+|+|+ ++++.|.++|++|...
T Consensus 15 k~vlVTGa-s~gIG~-----~~a~~l~~~G~~V~~~ 44 (249)
T 3f9i_A 15 KTSLITGA-SSGIGS-----AIARLLHKLGSKVIIS 44 (249)
T ss_dssp CEEEETTT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 578875 5778888999998874
No 254
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=46.71 E-value=15 Score=33.78 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=21.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
++.|+++| .||.||+.++..|+..|
T Consensus 25 ~~~i~l~G--~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 25 MVRIFLTG--YMGAGKTTLGKAFARKL 49 (199)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEc--CCCCCHHHHHHHHHHHc
Confidence 46789996 68999999999999877
No 255
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=46.68 E-value=43 Score=30.34 Aligned_cols=94 Identities=18% Similarity=0.114 Sum_probs=52.8
Q ss_pred eEEEEEeccCCC-cc--cHHHHHHHHHHcCceeeeeeeeEeecCCCcccccc---cCCCcchhhHHHhccCCCeEEEcCC
Q 008567 298 VRIAMVGKYVGL-AD--SYLSVVKALLHACIACSLKPSIDWIAASDLEDESA---KLTPKDHAAAWETLRNAECVLVPGG 371 (561)
Q Consensus 298 ~~Iavvgky~~~-~D--aY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~~---~~d~~~~~~~~~~l~~~DGIilpGG 371 (561)
+||-+-|-+.+. .| .|..+.+.|+..| .+- -.|+.++.+++... .+...-|..-.+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl----~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL----TEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC----CCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc----ccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 578888876442 23 5678999999999 431 14555444432110 0011112222344779999987543
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 008567 372 FGDRGVGGMILAAKYARENNIPYLGICL 399 (561)
Q Consensus 372 ~G~~~~~g~i~~ir~a~e~~iPvLGICL 399 (561)
....|..-.+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2235666667788889999999987
No 256
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=46.66 E-value=54 Score=31.12 Aligned_cols=34 Identities=18% Similarity=0.082 Sum_probs=22.2
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+... ......++.+.+.++|+.-+.
T Consensus 68 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 68 EQPDGVMFAPTVP----QYTKGFTDALNELGIPYIYID 101 (304)
T ss_dssp TCCSEEEECCSSG----GGTHHHHHHHHHHTCCEEEES
T ss_pred cCCCEEEECCCCh----HHHHHHHHHHHHCCCeEEEEe
Confidence 5899999987422 122345566667789986554
No 257
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=46.60 E-value=13 Score=35.54 Aligned_cols=32 Identities=34% Similarity=0.550 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 8 k~~lVTGa-s~gIG~-----aia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGA-SSGLGA-----AVTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 78999955 588886 467888899999987643
No 258
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=46.29 E-value=22 Score=35.55 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=30.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH-HCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK-ACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~-~~g~~v~~~K~ 39 (561)
+-++++|. +|.||..+|.+|+..+. .+|++|..+-.
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~ 189 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHF 189 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEH
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEH
Confidence 35788876 69999999999999999 99999876654
No 259
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=46.23 E-value=52 Score=33.47 Aligned_cols=105 Identities=15% Similarity=0.245 Sum_probs=61.5
Q ss_pred ccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhcCC
Q 008567 193 KTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQLNL 272 (561)
Q Consensus 193 ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l 272 (561)
|--+...+++-|.+. +|+|++|... ......++..+.+| ||+.-| ..+.=+..|-+
T Consensus 89 kgEsl~DTarvLs~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~--~~~HPtQaLaD------------- 144 (323)
T 3gd5_A 89 RGEPVRDTARVLGRY---VDGLAIRTFA---QTELEEYAHYAGIP---VINALT--DHEHPCQVVAD------------- 144 (323)
T ss_dssp --CCHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHHCSC---EEEEEC--SSCCHHHHHHH-------------
T ss_pred CCCCHHHHHHHHHHh---CCEEEEecCC---hhHHHHHHHhCCCC---EEeCCC--CCCCcHHHHHH-------------
Confidence 444555666666554 8999999864 44555666666664 788776 34343333322
Q ss_pred CccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCcc
Q 008567 273 LSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLE 342 (561)
Q Consensus 273 ~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~ 342 (561)
+.. +.+... .-+++||+++||.+.. -.|.+.++...|+++.+ +.|+.+.
T Consensus 145 --------l~T---i~e~~g-~l~glkva~vGD~~rv---a~Sl~~~~~~~G~~v~~------~~P~~~~ 193 (323)
T 3gd5_A 145 --------LLT---IRENFG-RLAGLKLAYVGDGNNV---AHSLLLGCAKVGMSIAV------ATPEGFT 193 (323)
T ss_dssp --------HHH---HHHHHS-CCTTCEEEEESCCCHH---HHHHHHHHHHHTCEEEE------ECCTTCC
T ss_pred --------HHH---HHHHhC-CCCCCEEEEECCCCcH---HHHHHHHHHHcCCEEEE------ECCCccc
Confidence 111 111111 1246899999987433 37888888888887654 5565554
No 260
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=46.11 E-value=14 Score=33.45 Aligned_cols=27 Identities=30% Similarity=0.380 Sum_probs=18.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
+.|.|+|+ +|.||+.++..|+. +|+.+
T Consensus 9 ~~I~i~G~--~GsGKST~~~~La~----~g~~~ 35 (203)
T 1uf9_A 9 IIIGITGN--IGSGKSTVAALLRS----WGYPV 35 (203)
T ss_dssp EEEEEEEC--TTSCHHHHHHHHHH----TTCCE
T ss_pred eEEEEECC--CCCCHHHHHHHHHH----CCCEE
Confidence 57899976 77899876655554 47543
No 261
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=46.10 E-value=81 Score=29.80 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=22.6
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+.... . ....++.+.+.++|+.-+.
T Consensus 63 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 96 (293)
T 3l6u_A 63 LKVDAIFITTLDDV-Y---IGSAIEEAKKAGIPVFAID 96 (293)
T ss_dssp TTCSEEEEECSCTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHcCCCEEEec
Confidence 58999999764322 1 2245666777899987663
No 262
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=46.02 E-value=20 Score=39.16 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=30.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
..|++|| .+|.||+.++..|...|..+|+++..+-.|
T Consensus 373 ~~I~l~G--~~GsGKSTia~~La~~L~~~G~~~~~ld~D 409 (546)
T 2gks_A 373 FCVWLTG--LPCAGKSTIAEILATMLQARGRKVTLLDGD 409 (546)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEECHH
T ss_pred eEEEccC--CCCCCHHHHHHHHHHHhhhcCCeEEEECch
Confidence 4688886 488999999999999999999877665443
No 263
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=45.79 E-value=12 Score=36.08 Aligned_cols=30 Identities=17% Similarity=0.364 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.||+|+ ++++.|.++|++|...
T Consensus 9 k~vlVTG-as~GIG~-----aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAG-AGRDIGR-----ACAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEET-TTSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEEC-CCchHHH-----HHHHHHHHCCCEEEEE
Confidence 6899995 4588886 4677888899998764
No 264
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=45.71 E-value=11 Score=35.54 Aligned_cols=32 Identities=28% Similarity=0.448 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...=.
T Consensus 15 k~vlITGa-s~gIG~~-----ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGA-ARGIGAA-----AARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CChHHHH-----HHHHHHHCCCEEEEEec
Confidence 68999966 5888865 67788899999877533
No 265
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=45.59 E-value=12 Score=36.47 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+ ++++.|.++|++|...-.
T Consensus 12 k~~lVTGa-s~gIG~-----aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 12 KVAFVTGA-ARGQGR-----SHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCC-CchHHH-----HHHHHHHHCCCeEEEEec
Confidence 78999955 588885 577888899999987644
No 266
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=45.57 E-value=79 Score=30.09 Aligned_cols=33 Identities=9% Similarity=-0.058 Sum_probs=22.3
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 56 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 56 SGAKGFVICTPDP----KLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp TTCCEEEEECSCG----GGHHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCCc----hhhHHHHHHHHHCCCcEEEe
Confidence 5799999987321 23344567777889998644
No 267
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=45.55 E-value=18 Score=39.69 Aligned_cols=36 Identities=25% Similarity=0.269 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCC-CeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACG-LRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g-~~v~~~K~ 39 (561)
..|++|| +||.||+.+|..|...|..+| +++..+-.
T Consensus 397 ~~I~l~G--lsGSGKSTiA~~La~~L~~~G~~~~~~lD~ 433 (573)
T 1m8p_A 397 FTIFLTG--YMNSGKDAIARALQVTLNQQGGRSVSLLLG 433 (573)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHHCSSCEEEEEH
T ss_pred eEEEeec--CCCCCHHHHHHHHHHHhcccCCceEEEECc
Confidence 4688885 688999999999999999888 66655443
No 268
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=45.44 E-value=14 Score=33.50 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=17.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVV 26 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~l 26 (561)
+.|++||+ +|.||+.++..|+..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAAE 33 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHh
Confidence 46899975 888998777666654
No 269
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=45.42 E-value=13 Score=35.91 Aligned_cols=31 Identities=35% Similarity=0.490 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||||+. +++.|.++|++|...-
T Consensus 31 k~vlVTGa-s~GIG~a-----ia~~l~~~G~~Vi~~~ 61 (281)
T 3ppi_A 31 ASAIVSGG-AGGLGEA-----TVRRLHADGLGVVIAD 61 (281)
T ss_dssp EEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 78999955 5888864 6777888999988753
No 270
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=45.40 E-value=12 Score=36.04 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+. +++.|.++|++|...-
T Consensus 9 k~~lVTGa-s~GIG~a-----ia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 9 AVAVVTGG-SSGIGLA-----TVELLLEAGAAVAFCA 39 (265)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 68999954 5888865 6778888999987753
No 271
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.39 E-value=12 Score=36.19 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| -.+|+|+. +++.|.++|++|...-.
T Consensus 14 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITG-AARGQGRA-----HAVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEES-TTSHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-CCChHHHH-----HHHHHHHCCCeEEEEec
Confidence 6899995 45888864 67788899999987543
No 272
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=45.36 E-value=12 Score=36.34 Aligned_cols=32 Identities=34% Similarity=0.575 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+ ++++.|.++|++|...-.
T Consensus 11 k~~lVTGa-s~gIG~-----a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGG-ARGMGR-----SHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCC-CchHHH-----HHHHHHHHCCCeEEEEeC
Confidence 78999955 588886 467888899999987644
No 273
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.20 E-value=14 Score=34.67 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 4 k~vlITGa-s~gIG~-----~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 4 GKVIVYGG-KGALGS-----AILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp EEEEEETT-TSHHHH-----HHHHHHHHTTEEEEEEES
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEec
Confidence 78999954 578875 577888899999987654
No 274
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.15 E-value=15 Score=35.27 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.||+|+. +++.|.++|++|...
T Consensus 12 k~vlVTG-as~gIG~a-----ia~~l~~~G~~V~~~ 41 (264)
T 3ucx_A 12 KVVVISG-VGPALGTT-----LARRCAEQGADLVLA 41 (264)
T ss_dssp CEEEEES-CCTTHHHH-----HHHHHHHTTCEEEEE
T ss_pred cEEEEEC-CCcHHHHH-----HHHHHHHCcCEEEEE
Confidence 7899995 46888865 677788899998874
No 275
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=45.14 E-value=12 Score=35.55 Aligned_cols=31 Identities=32% Similarity=0.422 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|-++||| -.+|+|+. +++.|.++|++|...-
T Consensus 3 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~ 33 (247)
T 3dii_A 3 RGVIVTG-GGHGIGKQ-----ICLDFLEAGDKVCFID 33 (247)
T ss_dssp CEEEEES-TTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-CCCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 7899995 45788864 6788889999998753
No 276
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=45.12 E-value=21 Score=31.81 Aligned_cols=24 Identities=38% Similarity=0.540 Sum_probs=19.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|+ +|.||+.++..|+..|
T Consensus 5 ~~I~l~G~--~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 5 QAVIFLGP--PGAGKGTQASRLAQEL 28 (186)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHh
Confidence 47889975 7889999888887655
No 277
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=44.82 E-value=18 Score=35.59 Aligned_cols=31 Identities=29% Similarity=0.457 Sum_probs=22.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
||-|+||||. .++| +.|++.|.++|++|..+
T Consensus 1 M~~vlVTGat-G~iG-----~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC-GFLG-----SNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT-SHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC-chhH-----HHHHHHHHhCCCEEEEE
Confidence 5779999653 4454 66777788899998875
No 278
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=44.71 E-value=10 Score=37.08 Aligned_cols=30 Identities=30% Similarity=0.566 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 9 k~vlVTGa-s~GIG~a-----ia~~la~~G~~V~~~ 38 (280)
T 3tox_A 9 KIAIVTGA-SSGIGRA-----AALLFAREGAKVVVT 38 (280)
T ss_dssp CEEEESST-TSHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888864 677888899998764
No 279
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=44.66 E-value=13 Score=35.44 Aligned_cols=31 Identities=35% Similarity=0.487 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+. +++.|.++|++|...-
T Consensus 8 k~~lVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~ 38 (247)
T 2jah_A 8 KVALITGA-SSGIGEA-----TARALAAEGAAVAIAA 38 (247)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEE
Confidence 78999955 5888865 6677888999988753
No 280
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=44.66 E-value=13 Score=35.60 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...=
T Consensus 13 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGA-SDGIGRE-----AAMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 68999955 5888864 6778888999988753
No 281
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=44.57 E-value=12 Score=36.49 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...-.
T Consensus 5 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 5 KVILITGA-SGGIGEG-----IARELGVAGAKILLGAR 36 (264)
T ss_dssp CEEEESST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-ccHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 78999955 5888865 67778889999887543
No 282
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=44.46 E-value=14 Score=36.10 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 30 k~vlVTGa-s~gIG~-----aia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGA-GAGIGL-----AVARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTT-TSTHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEe
Confidence 67999955 589986 46778888999998753
No 283
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=44.40 E-value=14 Score=35.22 Aligned_cols=32 Identities=34% Similarity=0.545 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 7 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~r 38 (256)
T 2d1y_A 7 KGVLVTGG-ARGIGRA-----IAQAFAREGALVALCDL 38 (256)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999954 5888865 66778889999987543
No 284
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=44.37 E-value=15 Score=33.50 Aligned_cols=24 Identities=29% Similarity=0.527 Sum_probs=18.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVV 26 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~l 26 (561)
++.|+++|+ +|.||+.++..|+..
T Consensus 15 ~~~I~l~G~--~GsGKsT~~~~L~~~ 38 (203)
T 1ukz_A 15 VSVIFVLGG--PGAGKGTQCEKLVKD 38 (203)
T ss_dssp CEEEEEECS--TTSSHHHHHHHHHHH
T ss_pred CcEEEEECC--CCCCHHHHHHHHHHH
Confidence 478999975 678999887777653
No 285
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=44.33 E-value=11 Score=36.95 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+. +++.|.++|++|...=
T Consensus 10 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGA-AKRLGRS-----IAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCeEEEEc
Confidence 68999955 5888875 6777888999987753
No 286
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=44.21 E-value=13 Score=36.26 Aligned_cols=29 Identities=28% Similarity=0.518 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++|||| .||+|+ ++++.|.++|++|..
T Consensus 26 k~~lVTGa-s~GIG~-----~ia~~la~~G~~V~~ 54 (281)
T 3v2h_A 26 KTAVITGS-TSGIGL-----AIARTLAKAGANIVL 54 (281)
T ss_dssp CEEEEETC-SSHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEE
Confidence 67999954 688886 477888899998876
No 287
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=44.08 E-value=12 Score=33.05 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=19.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|.++|+ ||.||+.++..|+.+|
T Consensus 5 ~~i~l~G~--~GsGKSTl~~~La~~l 28 (173)
T 1kag_A 5 RNIFLVGP--MGAGKSTIGRQLAQQL 28 (173)
T ss_dssp CCEEEECC--TTSCHHHHHHHHHHHT
T ss_pred CeEEEECC--CCCCHHHHHHHHHHHh
Confidence 46889975 8999999888887765
No 288
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.07 E-value=13 Score=36.24 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||||+. +++.|.++|++|...
T Consensus 34 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGS-SRGIGAA-----IAEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEE
Confidence 78999955 5888865 677888899999874
No 289
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=44.07 E-value=13 Score=36.70 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+ ++++.|.++|++|...-.
T Consensus 29 k~~lVTGa-s~GIG~-----aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 29 KVAFITGA-ARGQGR-----SHAITLAREGADIIAIDV 60 (299)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEec
Confidence 78999955 588886 467888899999987644
No 290
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=44.05 E-value=14 Score=35.66 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+ ++++.|.++|++|...-.
T Consensus 12 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGA-CGGIGL-----ETSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEcC
Confidence 78999955 588886 477788899999987543
No 291
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=43.97 E-value=13 Score=36.26 Aligned_cols=30 Identities=40% Similarity=0.610 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 6 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGG-ASGLGRA-----LVDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCcCEEEEE
Confidence 78999955 5888865 678888999998874
No 292
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=43.87 E-value=1.2e+02 Score=28.56 Aligned_cols=32 Identities=6% Similarity=0.174 Sum_probs=20.9
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 479999997643221 33455566789987664
No 293
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=43.81 E-value=1.4e+02 Score=28.18 Aligned_cols=32 Identities=9% Similarity=-0.089 Sum_probs=21.1
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 47999999874322 1 23455556789987764
No 294
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=43.71 E-value=12 Score=36.40 Aligned_cols=30 Identities=33% Similarity=0.623 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 29 k~vlVTGa-s~gIG~-----aia~~la~~G~~V~~~ 58 (269)
T 4dmm_A 29 RIALVTGA-SRGIGR-----AIALELAAAGAKVAVN 58 (269)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 588886 4677888999998763
No 295
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=43.69 E-value=14 Score=32.78 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
+.|+++| .||.||+.++..|...| |.....+-.|-+
T Consensus 4 ~~i~l~G--~~GsGKST~a~~La~~l---~~~~~~~~~D~~ 39 (178)
T 1qhx_A 4 RMIILNG--GSSAGKSGIVRCLQSVL---PEPWLAFGVDSL 39 (178)
T ss_dssp CEEEEEC--CTTSSHHHHHHHHHHHS---SSCEEEEEHHHH
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHhc---CCCeEEeccchH
Confidence 5678884 59999998888777655 333333344544
No 296
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=43.62 E-value=15 Score=34.90 Aligned_cols=32 Identities=31% Similarity=0.479 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 8 k~vlVTGa-s~giG~~-----ia~~l~~~G~~V~~~~r 39 (250)
T 2fwm_X 8 KNVWVTGA-GKGIGYA-----TALAFVEAGAKVTGFDQ 39 (250)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 5888875 66788889999987644
No 297
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=43.55 E-value=13 Score=36.01 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=24.9
Q ss_pred EEEEEeCCc---------------cCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGV---------------VSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv---------------~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|-++||||- .+|+| .+|++.|..+|++|+.+-
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG-----~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMG-----FAIAAAAARRGANVTLVS 55 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHH-----HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHH-----HHHHHHHHHCCCEEEEEE
Confidence 678999996 33455 567888999999999863
No 298
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.54 E-value=14 Score=35.22 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 6 k~vlVTGa-s~giG~~-----ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGA-AHGIGRA-----TLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6888875 56777889999987533
No 299
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=43.52 E-value=18 Score=35.27 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 22 k~vlVTGa-s~gIG~a-----ia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGA-TSGFGEA-----CARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESST-TTSSHHH-----HHHHHHHTTCEEEEEES
T ss_pred cEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 67999954 6899975 66778889999887543
No 300
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=43.38 E-value=13 Score=35.54 Aligned_cols=31 Identities=35% Similarity=0.576 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+ ++++.|.++|++|...-
T Consensus 10 k~~lVTGa-s~gIG~-----a~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGA-SRGIGK-----AIAELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 78999955 588886 46778889999997653
No 301
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=43.30 E-value=15 Score=34.74 Aligned_cols=32 Identities=31% Similarity=0.354 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|| |-.+|+|+. +++.|.++|++|...-.
T Consensus 8 k~vlVT-Gas~gIG~~-----ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVY-GGRGALGSR-----CVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEE-TTTSHHHHH-----HHHHHHTTTCEEEEEES
T ss_pred CEEEEE-CCCcHHHHH-----HHHHHHhCCCEEEEEeC
Confidence 679999 456788864 67788889999987644
No 302
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=43.22 E-value=11 Score=35.97 Aligned_cols=30 Identities=37% Similarity=0.521 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 10 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGG-ASGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999954 5888864 677788889998774
No 303
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=43.19 E-value=14 Score=35.07 Aligned_cols=30 Identities=30% Similarity=0.381 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|...
T Consensus 10 k~vlITGa-s~giG~-----~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 10 KVGIVTGS-GGGIGQ-----AYAEALAREGAAVVVA 39 (253)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEEE
Confidence 78999955 688886 5778888999998875
No 304
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=43.13 E-value=31 Score=32.02 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=29.8
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||.+-|+ -|.||+..+..|...|+++|++|...+.
T Consensus 2 fI~~EG~--DGsGKsTq~~~L~~~L~~~g~~v~~tre 36 (197)
T 3hjn_A 2 FITFEGI--DGSGKSTQIQLLAQYLEKRGKKVILKRE 36 (197)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 5777754 6889999999999999999999977664
No 305
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=43.10 E-value=57 Score=32.97 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=73.6
Q ss_pred ccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhcCC
Q 008567 193 KTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQLNL 272 (561)
Q Consensus 193 ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~l 272 (561)
|--+...+++-|.+. +|+|++|... ......++..+.+| ||+.-+ ..+.=+..|-+
T Consensus 86 kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~--~~~HPtQaLaD------------- 141 (309)
T 4f2g_A 86 RGEPVEDSAQVISRM---VDIIMIRTFE---QDIIQRFAENSRVP---VINGLT--NEYHPCQVLAD------------- 141 (309)
T ss_dssp BEECHHHHHHHHHHH---CSEEEEECSC---HHHHHHHHHTCSSC---EEEEEC--SSCCHHHHHHH-------------
T ss_pred CCCCHHHHHHHHHHh---CCEEEEecCC---HHHHHHHHHhCCCC---EEECCC--CccCcHHHHHH-------------
Confidence 445666777777776 7999999764 45556667666664 777754 44333333321
Q ss_pred CccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCccccc-c-c---
Q 008567 273 LSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDES-A-K--- 347 (561)
Q Consensus 273 ~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~-~-~--- 347 (561)
+.. +.+... .-+++||+++||.... -.|.+.++...|+++.+ +.|+.++... . .
T Consensus 142 --------l~T---i~e~~g-~l~glkva~vGD~~~v---a~Sl~~~~~~~G~~v~~------~~P~~~~~~~~~~~~~~ 200 (309)
T 4f2g_A 142 --------IFT---YYEHRG-PIRGKTVAWVGDANNM---LYTWIQAARILDFKLQL------STPPGYALDAKLVDAES 200 (309)
T ss_dssp --------HHH---HHHHHS-CCTTCEEEEESCCCHH---HHHHHHHHHHHTCEEEE------ECCGGGCCCGGGSCGGG
T ss_pred --------HHH---HHHHhC-CCCCCEEEEECCCcch---HHHHHHHHHHcCCEEEE------ECCcccCCCHHHHHHHc
Confidence 111 111111 1246899999997433 37888888888877544 4454443211 0 0
Q ss_pred -CCCcchhhHHHhccCCCeEEE
Q 008567 348 -LTPKDHAAAWETLRNAECVLV 368 (561)
Q Consensus 348 -~d~~~~~~~~~~l~~~DGIil 368 (561)
....-+++..+.++++|-|..
T Consensus 201 g~~v~~~~d~~eav~~aDvvyt 222 (309)
T 4f2g_A 201 APFYQVFDDPNEACKGADLVTT 222 (309)
T ss_dssp GGGEEECSSHHHHTTTCSEEEE
T ss_pred CCeEEEEcCHHHHhcCCCEEEe
Confidence 000012334455778887765
No 306
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=43.01 E-value=15 Score=35.98 Aligned_cols=32 Identities=34% Similarity=0.623 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+ ++++.|.++|++|...-.
T Consensus 48 k~vlVTGa-s~GIG~-----aia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGG-DSGIGR-----AVSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 68999955 588885 477788899999877533
No 307
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=42.97 E-value=25 Score=31.07 Aligned_cols=24 Identities=38% Similarity=0.436 Sum_probs=20.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|. ||.||+.++..|+..|
T Consensus 9 ~~i~l~G~--~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 9 HIYVLMGV--SGSGKSAVASEVAHQL 32 (175)
T ss_dssp EEEEEECS--TTSCHHHHHHHHHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHhh
Confidence 57889964 8999999999888765
No 308
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=42.95 E-value=14 Score=36.16 Aligned_cols=30 Identities=30% Similarity=0.513 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.||+|+. +++.|.++|++|...
T Consensus 30 k~~lVTG-as~GIG~a-----ia~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTG-GRRGIGLG-----IARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEET-TTSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEec-CCCHHHHH-----HHHHHHHCCCeEEEE
Confidence 6799995 46788864 677888899998764
No 309
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=42.90 E-value=12 Score=35.91 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...=.
T Consensus 8 k~~lVTGa-s~GIG~-----aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGA-SQGIGA-----VIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHHTCEEEEEES
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEEC
Confidence 68999955 588886 567778888999877533
No 310
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=42.90 E-value=16 Score=34.38 Aligned_cols=32 Identities=38% Similarity=0.595 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 3 k~vlVTGa-s~giG~-----~~a~~l~~~G~~V~~~~r 34 (239)
T 2ekp_A 3 RKALVTGG-SRGIGR-----AIAEALVARGYRVAIASR 34 (239)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 78999955 588886 467778889999987644
No 311
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=42.78 E-value=14 Score=35.52 Aligned_cols=31 Identities=42% Similarity=0.698 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 14 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGG-GSGLGRA-----TAVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 6888875 5677888999987753
No 312
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=42.64 E-value=12 Score=36.53 Aligned_cols=31 Identities=39% Similarity=0.642 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+. +++.|.++|++|...-
T Consensus 34 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGG-GTGVGRG-----IAQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEE
Confidence 67999955 5888865 6777888999988753
No 313
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=42.64 E-value=20 Score=34.86 Aligned_cols=30 Identities=43% Similarity=0.555 Sum_probs=21.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|| |+||||. + -+.+.|++.|.++|++|..+
T Consensus 1 m~-vlVTGat-G-----~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA-G-----FIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT-S-----HHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC-c-----HHHHHHHHHHHHCCCEEEEE
Confidence 44 8999654 4 44466778888899998774
No 314
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=42.60 E-value=19 Score=33.74 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=25.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCC-CeeeEeecC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACG-LRVTSIKID 40 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g-~~v~~~K~d 40 (561)
||-|+|||| .+++| +.|++.|.++| ++|..+-.+
T Consensus 23 mk~vlVtGa-tG~iG-----~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLILGA-GGQIA-----RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEETT-TSHHH-----HHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEEeC-CcHHH-----HHHHHHHHhCCCceEEEEEcC
Confidence 578999954 46666 45777888899 899886553
No 315
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=42.55 E-value=12 Score=36.26 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.||||+. +++.|.++|++|...
T Consensus 29 k~~lVTG-as~GIG~a-----ia~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTG-ASRGIGRA-----IALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETT-CSSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEEC-CCCHHHHH-----HHHHHHHCCCEEEEE
Confidence 6899995 56888864 667888999998764
No 316
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.45 E-value=14 Score=35.92 Aligned_cols=30 Identities=33% Similarity=0.483 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|||+ ++++.|.++|++|...
T Consensus 32 k~~lVTGa-s~GIG~-----aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGG-SRGIGA-----AIAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 78999955 588886 4677888899998764
No 317
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=42.42 E-value=17 Score=33.51 Aligned_cols=41 Identities=22% Similarity=0.146 Sum_probs=30.7
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCC
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTD 46 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d 46 (561)
-|.|+| - +|.||..+...+..-+... ++|..+..||..++|
T Consensus 40 ~i~ivG-~-~gvGKTtl~~~l~~~~~~~-~~~~~i~~d~~~~~d 80 (226)
T 2hf9_A 40 AFDFMG-A-IGSGKTLLIEKLIDNLKDK-YKIACIAGDVIAKFD 80 (226)
T ss_dssp EEEEEE-S-TTSSHHHHHHHHHHHHTTT-CCEEEEEEETTTHHH
T ss_pred EEEEEc-C-CCCCHHHHHHHHHHHhccC-CeEEEEECCCCCCcc
Confidence 456664 3 9999998888887776555 889998888765555
No 318
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=42.36 E-value=23 Score=37.88 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.|-|| |+ =|||.+++-|..+|++.|++|-.+
T Consensus 65 ~vI~Vt-GT---NGKtST~~~l~~iL~~~G~~vG~~ 96 (487)
T 2vos_A 65 PSIHIA-GT---NGKTSVARMVDALVTALHRRTGRT 96 (487)
T ss_dssp CEEEEE-CS---SSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEe-CC---CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 578888 43 599999999999999999999654
No 319
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=42.24 E-value=19 Score=31.79 Aligned_cols=25 Identities=32% Similarity=0.506 Sum_probs=18.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
|..|+++|+ +|.||+.++..|+..|
T Consensus 7 ~~~i~l~G~--~GsGKSTva~~La~~l 31 (168)
T 1zuh_A 7 MQHLVLIGF--MGSGKSSLAQELGLAL 31 (168)
T ss_dssp -CEEEEESC--TTSSHHHHHHHHHHHH
T ss_pred cceEEEECC--CCCCHHHHHHHHHHHh
Confidence 457899975 6789998777776655
No 320
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=42.24 E-value=14 Score=36.45 Aligned_cols=30 Identities=30% Similarity=0.485 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||||+. +++.|.++|++|...
T Consensus 32 k~vlVTGa-s~gIG~~-----la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGG-ASGIGLA-----TATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888864 677888899998774
No 321
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=42.21 E-value=13 Score=35.81 Aligned_cols=29 Identities=34% Similarity=0.609 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++|||| .+|+|+ ++++.|.++|++|..
T Consensus 27 k~vlVTGa-s~gIG~-----~la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGA-SKGIGR-----AIARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTT-TSHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEE
Confidence 67999955 588886 577888899999855
No 322
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.19 E-value=15 Score=35.33 Aligned_cols=32 Identities=28% Similarity=0.309 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+ ++++.|.++|++|...-.
T Consensus 9 k~~lVTGa-s~gIG~-----a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGG-THGMGL-----ATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETC-SSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 78999955 588886 577888899999987543
No 323
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=42.10 E-value=15 Score=35.02 Aligned_cols=33 Identities=36% Similarity=0.417 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.+
T Consensus 20 k~vlVTGa-s~gIG~~-----~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 20 KGVLVLAA-SRGIGRA-----VADVLSQEGAEVTICARN 52 (249)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEcCC
Confidence 67999955 5888865 667788899999876553
No 324
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=42.04 E-value=14 Score=34.89 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 6 k~vlITGa-s~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGA-SRGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEEEe
Confidence 78999955 588885 57788888999987643
No 325
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=42.02 E-value=73 Score=30.46 Aligned_cols=32 Identities=19% Similarity=0.488 Sum_probs=21.5
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+..... ..++.+.+.++|+.-+.
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 95 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLALG 95 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEEC
Confidence 489999998754322 34556667788886554
No 326
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=41.99 E-value=13 Score=35.21 Aligned_cols=29 Identities=38% Similarity=0.604 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|-++|||| .||+|+ ++++.|.++|++|..
T Consensus 5 k~~lVTGa-s~gIG~-----~ia~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGA-SRGIGR-----SIALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEE
Confidence 78999955 588886 467888899999875
No 327
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=41.96 E-value=11 Score=36.33 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 12 k~vlVTGa-s~GIG~a-----ia~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGG-IKNLGAL-----TAKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHTTSSCEEEEE
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 68999955 5888864 678888999998764
No 328
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=41.93 E-value=13 Score=35.13 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 8 k~vlITGa-s~gIG~~-----~a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGA-SRGIGRA-----IAKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCeEEEE
Confidence 78999955 5888864 667788899988663
No 329
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=41.85 E-value=1.1e+02 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=21.0
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 589999998743221 3456666778998654
No 330
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=41.84 E-value=26 Score=31.26 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=27.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH-HCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK-ACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~-~~g~~v~~ 36 (561)
+.++++|. +|.||..++.+|+..+. ..|++|..
T Consensus 39 ~~~~l~G~--~G~GKTtL~~~i~~~~~~~~g~~~~~ 72 (180)
T 3ec2_A 39 KGLTFVGS--PGVGKTHLAVATLKAIYEKKGIRGYF 72 (180)
T ss_dssp CEEEECCS--SSSSHHHHHHHHHHHHHHHSCCCCCE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHHcCCeEEE
Confidence 35778865 79999999999999997 88887655
No 331
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=41.84 E-value=15 Score=35.14 Aligned_cols=32 Identities=34% Similarity=0.437 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 10 k~vlVTGa-s~giG~~-----ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYG-----IVEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6888864 66777889999887533
No 332
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=41.82 E-value=12 Score=36.03 Aligned_cols=30 Identities=33% Similarity=0.627 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||||+. +++.|.++|++|...
T Consensus 26 k~vlITGa-s~gIG~~-----~a~~l~~~G~~v~~~ 55 (269)
T 3gk3_A 26 RVAFVTGG-MGGLGAA-----ISRRLHDAGMAVAVS 55 (269)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHTTTCEEEEE
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 78999955 5888864 677888899998663
No 333
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=41.78 E-value=17 Score=35.30 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...=.
T Consensus 7 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~~r 38 (274)
T 3e03_A 7 KTLFITGA-SRGIGLA-----IALRAARDGANVAIAAK 38 (274)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred cEEEEECC-CChHHHH-----HHHHHHHCCCEEEEEec
Confidence 78999955 4888865 67888889999887533
No 334
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=41.78 E-value=15 Score=35.89 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||+|+ ++++.|.++|++|...-
T Consensus 28 k~vlVTGa-s~GIG~-----aia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGG-GSGIGR-----ATAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEe
Confidence 78999955 588886 46788888999998753
No 335
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=41.75 E-value=14 Score=35.60 Aligned_cols=29 Identities=34% Similarity=0.563 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++|||| .||+|+. +++.|.++|++|..
T Consensus 5 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGS-SRGVGKA-----AAIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSC-SSHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEecC-CchHHHH-----HHHHHHHCCCEEEE
Confidence 78999955 5888864 67788899999876
No 336
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=41.68 E-value=15 Score=35.81 Aligned_cols=31 Identities=39% Similarity=0.518 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||| -.+|||+. +++.|.++|++|...-
T Consensus 25 k~~lVTG-as~GIG~a-----ia~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTG-VSSGIGLA-----VARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEES-TTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeC-CCCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 6799995 45888865 6777888999987643
No 337
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=41.68 E-value=33 Score=34.44 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=27.8
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHHHHC-C-CeeeEeecCccc
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVLKAC-G-LRVTSIKIDPYL 43 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll~~~-g-~~v~~~K~dpyl 43 (561)
.|.|.|. ||.||+.++..|+.+|+.. | .+|..+-.|+|+
T Consensus 92 ivgI~G~--sGsGKSTL~~~L~gll~~~~G~~~v~~v~qd~~~ 132 (312)
T 3aez_A 92 IIGVAGS--VAVGKSTTARVLQALLARWDHHPRVDLVTTDGFL 132 (312)
T ss_dssp EEEEECC--TTSCHHHHHHHHHHHHHTSTTCCCEEEEEGGGGB
T ss_pred EEEEECC--CCchHHHHHHHHHhhccccCCCCeEEEEecCccC
Confidence 5667754 8899999999999999864 3 345555555544
No 338
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=41.61 E-value=15 Score=35.54 Aligned_cols=31 Identities=39% Similarity=0.577 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 22 k~~lVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 22 RVALVTGG-SRGLGFG-----IAQGLAEAGCSVVVAS 52 (267)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 78999955 5888864 6677888999988753
No 339
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.55 E-value=14 Score=35.49 Aligned_cols=30 Identities=30% Similarity=0.483 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|||+. +++.|.++|++|...
T Consensus 30 k~vlITGa-s~gIG~~-----la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 30 QVAVVTGA-SRGIGAA-----IARKLGSLGARVVLT 59 (262)
T ss_dssp CEEEESST-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888865 567778889998765
No 340
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=41.45 E-value=26 Score=34.48 Aligned_cols=32 Identities=31% Similarity=0.313 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. |-+.+.|++.|.++|++|...-.
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEc
Confidence 568999754 45557788888889999986544
No 341
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=41.44 E-value=32 Score=35.30 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=31.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc---cccCCCCCCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP---YLNTDAGTMSP 52 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp---yln~d~g~msp 52 (561)
+.|+|+|+ ||.||+.+|..|+..|. +..+-.|- |-.+|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l~-----~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKFN-----GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT-----EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHcC-----CceeccccccccccccccccCC
Confidence 36889977 67789999988887653 56677776 45566666544
No 342
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=41.44 E-value=15 Score=34.54 Aligned_cols=30 Identities=33% Similarity=0.451 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|..+
T Consensus 12 k~vlITGa-sggiG~-----~la~~l~~~G~~V~~~ 41 (254)
T 2wsb_A 12 ACAAVTGA-GSGIGL-----EICRAFAASGARLILI 41 (254)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 578876 5677788899998875
No 343
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=41.42 E-value=14 Score=35.76 Aligned_cols=30 Identities=40% Similarity=0.506 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. +++.|.++|++|...
T Consensus 19 k~~lVTGa-s~gIG~a-----ia~~l~~~G~~V~~~ 48 (270)
T 3is3_A 19 KVALVTGS-GRGIGAA-----VAVHLGRLGAKVVVN 48 (270)
T ss_dssp CEEEESCT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888864 678888999998763
No 344
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=41.41 E-value=12 Score=33.48 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=15.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+++|+++|. +|.||+.++..|+..|
T Consensus 5 ~~~I~l~G~--~GsGKST~a~~La~~l 29 (183)
T 2vli_A 5 SPIIWINGP--FGVGKTHTAHTLHERL 29 (183)
T ss_dssp CCEEEEECC--C----CHHHHHHHHHS
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHhc
Confidence 368999964 7899998888776544
No 345
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=41.27 E-value=14 Score=35.12 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 5 k~vlVTGa-s~giG~~-----ia~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGA-SRGIGRA-----IAIDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 77999955 5888865 667788899998764
No 346
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=41.22 E-value=1e+02 Score=29.66 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=22.2
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 58 ~~vdgiIi~~~~~----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 58 KGVKVLVIASIDG----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HTCSEEEECCSSG----GGGHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEEcCCc----hhHHHHHHHHHHCCCCEEEE
Confidence 4899999986421 22334566777788998654
No 347
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.22 E-value=13 Score=36.14 Aligned_cols=29 Identities=31% Similarity=0.533 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.++||| -.||+|+ ++++.|.++|++|..
T Consensus 28 k~~lVTG-as~GIG~-----aia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTG-ASRGIGA-----AIAARLASDGFTVVI 56 (267)
T ss_dssp CEEEEES-CSSHHHH-----HHHHHHHHHTCEEEE
T ss_pred CEEEEeC-CCCHHHH-----HHHHHHHHCCCEEEE
Confidence 6799995 5688886 467778888999875
No 348
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=41.20 E-value=1.1e+02 Score=29.23 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=22.0
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+.... . ....++.+.+.++|+.-+
T Consensus 60 ~~vdgiii~~~~~~-~---~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 60 TYPSGIATTIPSDT-A---FSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp TCCSEEEECCCCSS-T---THHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCHH-H---HHHHHHHHHHCCCCEEEE
Confidence 58999999764222 1 234566777789998755
No 349
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=41.19 E-value=19 Score=35.94 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+. |++.|.++|++|...=.
T Consensus 9 k~vlVTGa-s~gIG~~-----la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGG-ANGVGIG-----LVRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETT-TSTHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEcCC-chHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 68999955 5898865 66778889999877533
No 350
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=41.05 E-value=42 Score=33.69 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=26.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
||=|+|.||- .....++..+|+.||+|..+ ||+-+
T Consensus 1 MK~I~ilGgg-------~~g~~~~~~Ak~~G~~vv~v--d~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGK-------LQGFEAAYLSKKAGMKVVLV--DKNPQ 35 (363)
T ss_dssp CCEEEEECCS-------HHHHHHHHHHHHTTCEEEEE--ESCTT
T ss_pred CCEEEEECCC-------HHHHHHHHHHHHCCCEEEEE--eCCCC
Confidence 7889999873 33356778899999999997 54333
No 351
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=41.04 E-value=15 Score=35.71 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|||+ ++++.|.++|++|...
T Consensus 32 k~~lVTGa-s~GIG~-----aia~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGA-GSGIGR-----AIAHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 588886 4677888999998763
No 352
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=40.99 E-value=15 Score=33.82 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLN 44 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln 44 (561)
+.|.|+|+ ||.||+.++..|+..+. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 56788875 58899988887776542 356666777763
No 353
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=40.98 E-value=14 Score=35.61 Aligned_cols=32 Identities=34% Similarity=0.661 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...-.
T Consensus 11 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGG-TKGIGRG-----IATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 78999955 5888864 67788899999887533
No 354
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=40.97 E-value=16 Score=35.72 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+. +++.|.++|++|...=.
T Consensus 10 k~vlVTGa-s~GIG~a-----ia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 10 KTMFISGG-SRGIGLA-----IAKRVAADGANVALVAK 41 (285)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHTTTCEEEEEES
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 68999955 5888864 67888899999887544
No 355
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=40.92 E-value=15 Score=34.92 Aligned_cols=32 Identities=22% Similarity=0.497 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| -.+|+|+. +++.|.++|++|...-.
T Consensus 7 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTA-AAQGIGQA-----AALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESS-TTSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCcHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 6899995 46788864 66778889999987543
No 356
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=40.91 E-value=17 Score=32.46 Aligned_cols=24 Identities=25% Similarity=0.425 Sum_probs=19.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++| .||.||+.++..|+..|
T Consensus 12 ~~i~i~G--~~GsGKst~~~~l~~~~ 35 (180)
T 3iij_A 12 PNILLTG--TPGVGKTTLGKELASKS 35 (180)
T ss_dssp CCEEEEC--STTSSHHHHHHHHHHHH
T ss_pred CeEEEEe--CCCCCHHHHHHHHHHHh
Confidence 4688996 58999999988888765
No 357
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=40.89 E-value=19 Score=34.62 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 22 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 22 RSVLVTGG-NRGIGLA-----IARAFADAGDKVAITYR 53 (253)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6888865 66788889999987644
No 358
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=40.81 E-value=21 Score=32.63 Aligned_cols=28 Identities=32% Similarity=0.347 Sum_probs=19.5
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
|+.|.++|+ +|.||+.++..|+. .|+.+
T Consensus 2 ~~~i~l~G~--~GsGKST~~~~La~----lg~~~ 29 (206)
T 1jjv_A 2 TYIVGLTGG--IGSGKTTIANLFTD----LGVPL 29 (206)
T ss_dssp CEEEEEECS--TTSCHHHHHHHHHT----TTCCE
T ss_pred CcEEEEECC--CCCCHHHHHHHHHH----CCCcc
Confidence 357889986 78899877666554 46543
No 359
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=40.75 E-value=16 Score=35.45 Aligned_cols=32 Identities=31% Similarity=0.499 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 16 k~~lVTGa-s~gIG~-----a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGA-ARGQGR-----SHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEec
Confidence 78999955 578885 577888899999987644
No 360
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=40.74 E-value=82 Score=29.63 Aligned_cols=31 Identities=6% Similarity=0.085 Sum_probs=21.9
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+... ...++.+.+.++|+.-+.
T Consensus 62 ~~vdgiIi~~~~~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 62 RGFDGLILQSFSN-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp TTCSEEEEESSCC-------HHHHHHHHTTSSCEEEES
T ss_pred CCCCEEEEecCCc-------HHHHHHHHHCCCCEEEEe
Confidence 5899999987432 345566667889987654
No 361
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=40.71 E-value=17 Score=35.02 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 29 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 29 KVVVITGA-SQGIGA-----GLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 67999954 588885 567788889999988644
No 362
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=40.71 E-value=16 Score=34.99 Aligned_cols=31 Identities=26% Similarity=0.407 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 9 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGS-ARGIGRA-----FAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999954 5888864 6778888999988753
No 363
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.69 E-value=14 Score=35.89 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 28 k~~lVTGa-s~GIG~a-----ia~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGG-GSGIGFR-----IAEIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHTTTCEEEEE
T ss_pred CEEEEeCC-CchHHHH-----HHHHHHHCCCEEEEE
Confidence 78999965 5788865 667788899998764
No 364
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=40.68 E-value=14 Score=35.60 Aligned_cols=30 Identities=30% Similarity=0.531 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 12 k~~lVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGG-ARRIGHS-----IAVRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888865 667778899998764
No 365
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=40.58 E-value=13 Score=36.36 Aligned_cols=30 Identities=40% Similarity=0.606 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|| |-.||+|+. +++.|.+.|.+|...
T Consensus 10 KvalVT-Gas~GIG~a-----iA~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVT-GANTGLGQA-----IAVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEET-TTTSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEe-CcCCHHHHH-----HHHHHHHcCCEEEEE
Confidence 678999 556899975 678899999999763
No 366
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=40.53 E-value=26 Score=32.29 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=23.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHH-HCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLK-ACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~-~~g~~v~~~K~ 39 (561)
||-|+||| -.+++|+ .+++.|. ++|++|..+-.
T Consensus 5 mk~vlVtG-asg~iG~-----~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILG-AAGQIAQ-----XLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp CSEEEEES-TTSHHHH-----HHHHHHHHHCCCEEEEEES
T ss_pred EEEEEEEe-CCcHHHH-----HHHHHHHhcCCceEEEEec
Confidence 46799995 4567775 4555666 89999988655
No 367
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=40.52 E-value=14 Score=35.64 Aligned_cols=30 Identities=37% Similarity=0.568 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 30 k~vlITGa-s~gIG~-----~la~~l~~~G~~V~~~ 59 (271)
T 4iin_A 30 KNVLITGA-SKGIGA-----EIAKTLASMGLKVWIN 59 (271)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 578885 5677788899998764
No 368
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=40.45 E-value=16 Score=35.17 Aligned_cols=32 Identities=34% Similarity=0.443 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
+|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 5 ~k~vlVTGa-s~gIG~-----~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 5 AKVWLVTGA-SSGFGR-----AIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp CCEEEETTT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECC-CChHHH-----HHHHHHHHCCCEEEEEe
Confidence 378999955 578886 46778888999987653
No 369
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=40.42 E-value=22 Score=34.89 Aligned_cols=34 Identities=29% Similarity=0.312 Sum_probs=22.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCcc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPY 42 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpy 42 (561)
++.|.|||+ ||.||+.+|..|.. .|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~La~----lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRLKN----LGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHH----HTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHHHH----CCCcE--EehhHH
Confidence 367899975 68899987776663 47654 334443
No 370
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=40.39 E-value=12 Score=36.60 Aligned_cols=30 Identities=43% Similarity=0.444 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.||+|+. +++.|.+.|.+|...
T Consensus 10 KvalVTG-as~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTG-SARGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETT-CSSHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeC-CCcHHHHH-----HHHHHHHCCCEEEEE
Confidence 7899995 55888865 688899999998773
No 371
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=40.37 E-value=15 Score=35.17 Aligned_cols=31 Identities=29% Similarity=0.509 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||| -.+|+|+. +++.|.++|++|...-
T Consensus 6 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTG-ASRGIGRG-----IALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESS-TTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeC-CCchHHHH-----HHHHHHHCCCEEEEEe
Confidence 7899995 46888864 6677888999987753
No 372
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=40.33 E-value=16 Score=34.23 Aligned_cols=30 Identities=33% Similarity=0.471 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|...
T Consensus 6 ~~vlItGa-sggiG~-----~~a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGS-SRGLGK-----AIAWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred cEEEEECC-CchHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 588886 4667788899998775
No 373
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.30 E-value=16 Score=35.45 Aligned_cols=32 Identities=38% Similarity=0.451 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 23 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGA-TSGIGLE-----IARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 78999955 5888865 66778889999887543
No 374
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=40.29 E-value=17 Score=32.38 Aligned_cols=25 Identities=28% Similarity=0.391 Sum_probs=19.4
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
|+.|+++| .+|.||+.++..|+..|
T Consensus 4 m~~i~i~G--~~GsGKsTla~~La~~l 28 (175)
T 1via_A 4 AKNIVFIG--FMGSGKSTLARALAKDL 28 (175)
T ss_dssp -CCEEEEC--CTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEc--CCCCCHHHHHHHHHHHc
Confidence 35688885 38999999998888765
No 375
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=40.05 E-value=26 Score=37.13 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG 64 (561)
|.|-||| .=||+.|++-|+.+|++.|++++. .+.--+| +.|...-.+..+++|.+=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 5788884 369999999999999999998432 2322222 2221111123467777665
No 376
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=39.91 E-value=19 Score=35.28 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|| |-.||+|+. +++.|.+.|.+|...-
T Consensus 8 KvalVT-Gas~GIG~a-----ia~~la~~Ga~Vv~~~ 38 (258)
T 4gkb_A 8 KVVIVT-GGASGIGGA-----ISMRLAEERAIPVVFA 38 (258)
T ss_dssp CEEEEE-TTTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEe-CCCCHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999 556899975 5778889999988743
No 377
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=39.86 E-value=15 Score=34.40 Aligned_cols=29 Identities=34% Similarity=0.597 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
|.|+|||| .+|+|+ .+++.|.++|++|..
T Consensus 2 k~vlVTGa-sggiG~-----~la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGA-SRGIGK-----AIALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEeCC-CchHHH-----HHHHHHHHCCCEEEE
Confidence 67999955 578886 567778889999876
No 378
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=39.81 E-value=25 Score=31.31 Aligned_cols=24 Identities=33% Similarity=0.519 Sum_probs=19.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
++|+++|+ +|.||+.+|..|+..|
T Consensus 4 ~~I~l~G~--~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 4 LVVFVLGG--PGAGKGTQCARIVEKY 27 (196)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHh
Confidence 67899975 7889999988877654
No 379
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=39.80 E-value=17 Score=34.72 Aligned_cols=31 Identities=35% Similarity=0.515 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 3 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGA-GQGIGKA-----IALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 78999955 5888864 6778888999988753
No 380
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=39.80 E-value=19 Score=32.31 Aligned_cols=24 Identities=29% Similarity=0.563 Sum_probs=19.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
++|+++|+ +|.||+.++..|+..|
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~La~~l 33 (196)
T 2c95_A 10 NIIFVVGG--PGSGKGTQCEKIVQKY 33 (196)
T ss_dssp CEEEEEEC--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899974 7889999888887755
No 381
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=39.80 E-value=15 Score=36.61 Aligned_cols=32 Identities=28% Similarity=0.514 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||||+ ++++.|.++|++|..+-.
T Consensus 47 k~~lVTGa-s~GIG~-----aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGA-ARGQGR-----THAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCeEEEEec
Confidence 68999955 588886 467788889999987643
No 382
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=39.68 E-value=17 Score=34.90 Aligned_cols=31 Identities=32% Similarity=0.528 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 8 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 8 KVALVTGA-AQGIGRA-----FAEALLLKGAKVALVD 38 (267)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCcHHHH-----HHHHHHHCCCEEEEEE
Confidence 68999955 5788864 6777888999988753
No 383
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=39.66 E-value=17 Score=34.49 Aligned_cols=30 Identities=37% Similarity=0.589 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.|+|||| .+|+|+ .+++.|.++|++|..+
T Consensus 15 k~vlITGa-sggiG~-----~~a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGG-NRGIGL-----AFTRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETT-TSHHHH-----HHHHHHHHTTEEEEEE
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCeEEEE
Confidence 77999965 578885 5677788899988765
No 384
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=39.61 E-value=17 Score=34.68 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 8 k~vlVTGa-s~gIG~-----~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGS-SSGIGL-----AIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESC-SSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCEEEEEc
Confidence 67999955 588886 46677888999988753
No 385
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=39.60 E-value=26 Score=37.22 Aligned_cols=37 Identities=30% Similarity=0.248 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYL 43 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyl 43 (561)
|.|-||| .=||+.|++-|+.+|++.|++|..+ +-|.+
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~~-~~g~~ 151 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTVF-LGGIM 151 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-CSSCC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEE-ECCee
Confidence 5688884 3699999999999999999998643 44443
No 386
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=39.60 E-value=15 Score=35.12 Aligned_cols=30 Identities=37% Similarity=0.696 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 3 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 32 (258)
T 3a28_C 3 KVAMVTGG-AQGIGRG-----ISEKLAADGFDIAVA 32 (258)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 78999955 5888865 667777789998775
No 387
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=39.56 E-value=17 Score=34.89 Aligned_cols=31 Identities=29% Similarity=0.306 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||| -.+|+|+. +++.|.++|++|...-
T Consensus 8 k~vlVTG-as~gIG~~-----ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 8 KVALVSG-GARGMGAS-----HVRAMVAEGAKVVFGD 38 (260)
T ss_dssp CEEEEET-TTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeC-CCCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 6799995 46788864 6777888999988753
No 388
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=39.49 E-value=15 Score=35.12 Aligned_cols=31 Identities=39% Similarity=0.605 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 7 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGG-SSGMGK-----GMATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 78999955 578885 46788889999988753
No 389
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=39.43 E-value=17 Score=34.43 Aligned_cols=31 Identities=39% Similarity=0.543 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||| ..+|+|+. +++.|.++|++|...=
T Consensus 8 k~vlITG-asggiG~~-----la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 8 ALALVTG-AGSGIGRA-----VSVRLAGEGATVAACD 38 (264)
T ss_dssp CEEEEET-TTSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-CCChHHHH-----HHHHHHHCCCEEEEEe
Confidence 6799995 46788864 6677788899988753
No 390
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=39.42 E-value=14 Score=35.64 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 28 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~r 59 (260)
T 3gem_A 28 APILITGA-SQRVGL-----HCALRLLEHGHRVIISYR 59 (260)
T ss_dssp CCEEESST-TSHHHH-----HHHHHHHHTTCCEEEEES
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 67899955 588886 577788889999987644
No 391
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=39.41 E-value=17 Score=34.86 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 8 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 8 KVCLVTGA-GGNIGLA-----TALRLAEEGTAIALLD 38 (262)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 6888864 6777888999988753
No 392
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=39.40 E-value=24 Score=33.72 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=19.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|+ +|.|||.+|..|+..|
T Consensus 30 ~~I~l~G~--~GsGKsT~a~~L~~~~ 53 (243)
T 3tlx_A 30 GRYIFLGA--PGSGKGTQSLNLKKSH 53 (243)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHH
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899976 6788998888887654
No 393
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=39.33 E-value=17 Score=35.80 Aligned_cols=30 Identities=33% Similarity=0.519 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 50 k~vlVTGa-s~GIG~a-----ia~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGG-DSGIGRA-----AAIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 78999955 5888864 677888999998763
No 394
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=39.28 E-value=13 Score=36.11 Aligned_cols=30 Identities=33% Similarity=0.496 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| -.+|+|+ ++++.|.++|++|...
T Consensus 27 k~~lVTG-as~gIG~-----aia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTG-SSRGLGR-----AMAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETT-CSSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CEEEEeC-CCcHHHH-----HHHHHHHHCCCEEEEE
Confidence 6899995 4688886 4678888999998764
No 395
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=39.25 E-value=7.3 Score=35.34 Aligned_cols=34 Identities=35% Similarity=0.516 Sum_probs=26.7
Q ss_pred EEEEEeCCccCCCchHHHHHHH----HHHHHHCCCeee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSV----GVVLKACGLRVT 35 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~----~~ll~~~g~~v~ 35 (561)
|-+-++|=|+||+|+|-.--|+ .+..+..||.-.
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF~Pf 42 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGFEPY 42 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSSCCC
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCCcCC
Confidence 5678899999999999887777 566677787543
No 396
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=39.25 E-value=22 Score=32.07 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=19.4
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHH
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+|+++|+ +|.||+.++..|+..|
T Consensus 2 ~I~i~G~--~GsGKsT~~~~L~~~l 24 (205)
T 2jaq_A 2 KIAIFGT--VGAGKSTISAEISKKL 24 (205)
T ss_dssp EEEEECC--TTSCHHHHHHHHHHHH
T ss_pred EEEEECC--CccCHHHHHHHHHHhc
Confidence 6888965 8999999999888876
No 397
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=39.24 E-value=33 Score=32.12 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=29.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
.|||.+-|+ -|.||+..+..|...|. +|++|...+-
T Consensus 2 ~kFI~~EG~--dGsGKsTq~~~L~~~L~-~~~~v~~~~e 37 (205)
T 4hlc_A 2 SAFITFEGP--EGSGKTTVINEVYHRLV-KDYDVIMTRE 37 (205)
T ss_dssp CEEEEEECC--TTSCHHHHHHHHHHHHT-TTSCEEEEES
T ss_pred CCEEEEECC--CCCcHHHHHHHHHHHHH-CCCCEEEeeC
Confidence 389999975 58899999999999996 5888766543
No 398
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=39.24 E-value=25 Score=34.40 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
||-|+||||. |-+.+.|++.|.++|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 5679999653 4455677778888999998753
No 399
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.20 E-value=17 Score=35.49 Aligned_cols=31 Identities=32% Similarity=0.552 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++||| -.||+|+. +++.|.++|++|...-
T Consensus 29 k~~lVTG-as~GIG~a-----ia~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITG-AGSGIGRA-----TALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEES-CSSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-CCCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 6799995 45888864 6788888999987753
No 400
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=39.10 E-value=15 Score=36.63 Aligned_cols=31 Identities=32% Similarity=0.524 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .||||+. +++.|.++|++|...-
T Consensus 28 k~vlVTGa-s~GIG~a-----ia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGA-GGGIGRA-----HALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEC
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 68999955 5888864 6777888999998753
No 401
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=39.10 E-value=17 Score=34.78 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 15 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAS-TDGIGLA-----IARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999954 6788864 6777888999988753
No 402
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=39.06 E-value=18 Score=34.45 Aligned_cols=32 Identities=38% Similarity=0.524 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 16 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 16 RSVLVTGG-NRGIGLA-----IAQRLAADGHKVAVTHR 47 (247)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 5888865 66778889999987644
No 403
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=39.05 E-value=18 Score=34.23 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.|+|||| .+|+|+ ++++.|.++|++|..+-
T Consensus 14 k~vlItGa-sggiG~-----~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 14 RVAIVTGG-AQNIGL-----ACVTALAEAGARVIIAD 44 (260)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CchHHH-----HHHHHHHHCCCEEEEEe
Confidence 67999955 577775 56777888999988753
No 404
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=39.04 E-value=12 Score=35.01 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...-.
T Consensus 7 k~vlVTGa-s~gIG~~-----~a~~l~~~G~~V~~~~r 38 (223)
T 3uce_A 7 TVYVVLGG-TSGIGAE-----LAKQLESEHTIVHVASR 38 (223)
T ss_dssp EEEEEETT-TSHHHHH-----HHHHHCSTTEEEEEESG
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEecC
Confidence 78999954 5888875 56778888999887544
No 405
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=38.96 E-value=18 Score=34.44 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...=.
T Consensus 10 k~vlITGa-s~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGA-GSGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCEEEEEcC
Confidence 68999955 588885 577888899999887533
No 406
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=38.96 E-value=17 Score=35.02 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|..+-.
T Consensus 33 k~vlVTGa-sggIG~~-----la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGA-SGGIGAA-----VARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCEEEEEEC
Confidence 67999954 5788764 66777788999887533
No 407
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=38.94 E-value=17 Score=35.92 Aligned_cols=32 Identities=38% Similarity=0.691 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|||| .+|||+. +++.|.++|++|...-.
T Consensus 42 k~vlVTGa-s~GIG~a-----ia~~la~~G~~V~~~~r 73 (293)
T 3rih_A 42 RSVLVTGG-TKGIGRG-----IATVFARAGANVAVAAR 73 (293)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 67999955 5788864 67788899999987543
No 408
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=38.89 E-value=15 Score=35.24 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=26.3
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dp 41 (561)
+|-|+|||| .++||+ .|++.|.++|++|...-.++
T Consensus 3 ~k~vlVTGa-sg~IG~-----~la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGA-AGQLGR-----VMRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEEST-TSHHHH-----HHHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECC-CCHHHH-----HHHHHHHhcCCEEEEEecCC
Confidence 478999954 577775 56778888999998876543
No 409
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.85 E-value=18 Score=33.64 Aligned_cols=32 Identities=47% Similarity=0.802 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 3 k~vlVtGa-sggiG~-----~la~~l~~~G~~V~~~~r 34 (242)
T 1uay_A 3 RSALVTGG-ASGLGR-----AAALALKARGYRVVVLDL 34 (242)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHHTCEEEEEES
T ss_pred CEEEEeCC-CChHHH-----HHHHHHHHCCCEEEEEcc
Confidence 67999965 578885 466777788999988644
No 410
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=38.82 E-value=1.5e+02 Score=28.10 Aligned_cols=32 Identities=9% Similarity=0.146 Sum_probs=20.7
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+.... . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 58999999774221 1 23455556789987664
No 411
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=38.78 E-value=14 Score=37.10 Aligned_cols=30 Identities=37% Similarity=0.583 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++||| ..||+|+ ++++.|.++|++|...
T Consensus 6 k~vlVTG-as~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITG-ASSGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESS-CSSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEEC-CCcHHHH-----HHHHHHHHCCCEEEEe
Confidence 6899995 4588886 5778888999998753
No 412
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=38.75 E-value=29 Score=33.74 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. ++ +.+.|++.|.++|++|..+-.
T Consensus 13 ~~vlVTGat-G~-----iG~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVA-GF-----VGKYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp CEEEEETTT-SH-----HHHHHHHHHHHTTCEEEEEES
T ss_pred ceEEEECCC-Ch-----HHHHHHHHHHHCCCEEEEEec
Confidence 569999664 44 446677888889999988654
No 413
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=38.74 E-value=17 Score=34.71 Aligned_cols=30 Identities=33% Similarity=0.490 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|...
T Consensus 5 k~vlVTGa-s~gIG~-----~ia~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGS-TSGIGL-----GIATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHcCCEEEEE
Confidence 78999955 688886 4677888899998764
No 414
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=38.71 E-value=80 Score=30.09 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=22.0
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+.... .....++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~~----~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 60 KNPAGIAISAIDPV----ELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HCCSEEEECCSSTT----TTHHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEcCCCHH----HHHHHHHHHHHCCCcEEEE
Confidence 48999999874322 1234566677789998754
No 415
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=38.70 E-value=20 Score=34.97 Aligned_cols=30 Identities=33% Similarity=0.589 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 33 k~~lVTGa-s~GIG~-----aia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGA-STGIGK-----KVALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CCHHHH-----HHHHHHHHCCCEEEEE
Confidence 68999965 488886 4678888999998875
No 416
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=38.62 E-value=1.3e+02 Score=29.78 Aligned_cols=89 Identities=7% Similarity=-0.058 Sum_probs=51.8
Q ss_pred CceEEEEEeccCCCcccHH----HHHHHHHHcC-ceeeeeeeeEeecCCCcccccccCCCcchhhHHHhccCCCeEEEcC
Q 008567 296 NSVRIAMVGKYVGLADSYL----SVVKALLHAC-IACSLKPSIDWIAASDLEDESAKLTPKDHAAAWETLRNAECVLVPG 370 (561)
Q Consensus 296 ~~~~Iavvgky~~~~DaY~----Si~~aL~~ag-~~~~v~v~i~~i~~~~l~~~~~~~d~~~~~~~~~~l~~~DGIilpG 370 (561)
++.||.|++.-..+ | +. .+.+.|+..| +++.+. .+++..+ ++..|. +.|.++|.||+.-
T Consensus 3 ~~~kvLiv~G~~~H-~-~~~~~~~l~~~l~~~g~f~V~~~-----~d~~~~~------d~~~f~---~~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQNNH-N-WQVSHVVLKQILENSGRFDVDFV-----ISPEQGK------DMSGFV---LDFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCCSS-C-HHHHHHHHHHHHHHTTSEEEEEE-----ECCCTTS------CCTTCC---CCCTTCSEEEECC
T ss_pred CceEEEEEcCCCCC-C-hHHHHHHHHHHHHhcCCEEEEEE-----eCCcccc------chhHHh---hhhhcCCEEEEeC
Confidence 45788888765333 3 33 3556667677 666553 1111000 111121 3588999999644
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 008567 371 GFGDRGVGGMILAAKYARENNIPYLGICLGM 401 (561)
Q Consensus 371 G~G~~~~~g~i~~ir~a~e~~iPvLGICLGm 401 (561)
.+..-.....+++...++++.+++|+.-+.
T Consensus 67 -~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 -NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp -CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred -CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 233222456677777788899999998654
No 417
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=38.37 E-value=16 Score=35.17 Aligned_cols=32 Identities=38% Similarity=0.450 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 11 k~~lVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGS-TAGIGKA-----IATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 5888864 66788889999987533
No 418
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=38.14 E-value=19 Score=33.71 Aligned_cols=32 Identities=41% Similarity=0.632 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 8 k~vlITGa-sggiG~~-----~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGA-GKGIGRG-----TVQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred cEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999954 5788764 56778889999887543
No 419
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=38.13 E-value=16 Score=35.55 Aligned_cols=32 Identities=38% Similarity=0.529 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 29 k~~lVTGa-s~GIG~a-----ia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 29 KIAIVTGA-GSGVGRA-----VAVALAGAGYGVALAGR 60 (272)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 67999954 5888864 67788889999887543
No 420
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=38.10 E-value=26 Score=34.43 Aligned_cols=32 Identities=28% Similarity=0.236 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. |-+.+.|++.|.++|++|...-.
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEC
Confidence 569999654 45556777888889999986544
No 421
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=38.10 E-value=17 Score=34.24 Aligned_cols=31 Identities=29% Similarity=0.457 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...=
T Consensus 8 k~vlVTGa-sggiG~-----~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 8 KRVLITGS-SQGIGL-----ATARLFARAGAKVGLHG 38 (258)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CChHHH-----HHHHHHHHCCCEEEEEC
Confidence 67999955 578876 46677788999987653
No 422
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=38.09 E-value=18 Score=34.98 Aligned_cols=32 Identities=44% Similarity=0.553 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 12 k~vlVTGa-s~gIG~-----aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVTGG-GSGIGK-----GVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 67999955 688886 467888889999887533
No 423
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=38.07 E-value=16 Score=35.20 Aligned_cols=32 Identities=28% Similarity=0.467 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .||+|+. +++.|.++|++|...-.
T Consensus 21 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGA-TKGIGAD-----IARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6888864 67788899999877533
No 424
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=38.05 E-value=18 Score=34.54 Aligned_cols=31 Identities=39% Similarity=0.543 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 6 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGG-ARGLGAE-----AARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999954 6888864 6677888999988753
No 425
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=37.97 E-value=18 Score=34.82 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|+|||| .+|+|+ ++++.|.++|++|...-.
T Consensus 32 k~vlITGa-sggIG~-----~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGA-GHGIGR-----LTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCEEEEEEc
Confidence 67999955 578876 467788889999887543
No 426
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=37.86 E-value=19 Score=34.41 Aligned_cols=31 Identities=29% Similarity=0.551 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 13 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGG-SKGIGAA-----IARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 5788864 6677888999988753
No 427
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=37.85 E-value=34 Score=29.61 Aligned_cols=37 Identities=19% Similarity=0.133 Sum_probs=29.0
Q ss_pred CCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHH
Q 008567 362 NAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGICLGMQIS 404 (561)
Q Consensus 362 ~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGICLGmQLL 404 (561)
++.+|++..|+-+ -++.+.|+++++.++|=|+|+++-
T Consensus 82 g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 82 KPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp CCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 5667888777643 367778889999999999999874
No 428
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=37.72 E-value=30 Score=36.90 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecCccccCCCCCCCCccccceEEcCCC
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~dpyln~d~g~msp~~hgev~V~~dG 64 (561)
|.|-||| .=||+.|++-|+.+|++.|++++. ++.--+| +.|...-.+..+++|.+=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 5788884 369999999999999999997432 2222222 2221111123477777665
No 429
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=37.64 E-value=12 Score=39.25 Aligned_cols=36 Identities=19% Similarity=0.439 Sum_probs=27.0
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCC-CEEEEehhH
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNI-PYLGICLGM 401 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~i-PvLGICLGm 401 (561)
.++|.||.-||-|. ++.+++.+...++ |+|||=+|.
T Consensus 113 ~~~DlVIvlGGDGT-----lL~aa~~~~~~~vpPiLGIN~G~ 149 (388)
T 3afo_A 113 NRTDLLVTLGGDGT-----ILHGVSMFGNTQVPPVLAFALGT 149 (388)
T ss_dssp HHCSEEEEEESHHH-----HHHHHHTTTTSCCCCEEEEECSS
T ss_pred cCCCEEEEEeCcHH-----HHHHHHHhcccCCCeEEEEECCC
Confidence 46899999998553 4566666655677 899998873
No 430
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=37.60 E-value=19 Score=34.85 Aligned_cols=31 Identities=39% Similarity=0.583 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 10 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 40 (270)
T 1yde_A 10 KVVVVTGG-GRGIGAG-----IVRAFVNSGARVVICD 40 (270)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 5788864 6777888999988753
No 431
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=37.56 E-value=19 Score=35.06 Aligned_cols=32 Identities=31% Similarity=0.351 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||||. +|||+ ++++.|.++|++|...-.
T Consensus 17 k~vlVTGas-~gIG~-----~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 17 RTVVITGAN-SGLGA-----VTARELARRGATVIMAVR 48 (291)
T ss_dssp CEEEEECCS-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHH-----HHHHHHHHCCCEEEEEEC
Confidence 679999654 88885 466788889999887543
No 432
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=37.55 E-value=19 Score=34.74 Aligned_cols=31 Identities=29% Similarity=0.508 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 7 k~vlITGa-s~gIG~a-----ia~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGA-ASGIGRA-----ALDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEEST-TSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 6888865 6677888999988753
No 433
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=37.51 E-value=16 Score=36.61 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|||+. +++.|.++|++|...=
T Consensus 47 k~~lVTGa-s~GIG~a-----ia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGA-AKRLGRS-----IAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEc
Confidence 67999955 5888865 6778888999988753
No 434
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=37.44 E-value=19 Score=34.29 Aligned_cols=30 Identities=37% Similarity=0.531 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|...
T Consensus 5 k~vlVTGa-s~giG~-----~ia~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGS-TSGIGL-----GIAQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 588886 4677788899998764
No 435
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=37.41 E-value=36 Score=36.30 Aligned_cols=34 Identities=24% Similarity=0.156 Sum_probs=28.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|-||| +-||+.+++-|..+|+..|++|..+.-
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~gs 142 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMGT 142 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEECC
Confidence 5677884 469999999999999999999887643
No 436
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=37.33 E-value=92 Score=29.55 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=20.8
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+..... ..++.+.+.++|+.-+.
T Consensus 65 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 65 GSADGVIISKIEPND------PRVRFMTERNMPFVTHG 96 (288)
T ss_dssp TCCSEEEEESCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCccEEEEecCCCCc------HHHHHHhhCCCCEEEEC
Confidence 589999998633221 34556667788886543
No 437
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=37.26 E-value=16 Score=35.57 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|||+. +++.|.++|++|...-.
T Consensus 24 k~~lVTGa-s~gIG~a-----ia~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGA-AKRIGRA-----IAVKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEeCC-CCHHHHH-----HHHHHHHCCCeEEEEeC
Confidence 67999955 5888875 66677788999877533
No 438
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=37.14 E-value=29 Score=34.58 Aligned_cols=33 Identities=33% Similarity=0.314 Sum_probs=23.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
||-|+||||. +++| +.|++.|.++|++|..+-.
T Consensus 1 m~~vlVtGat-G~iG-----~~l~~~L~~~g~~V~~~~r 33 (372)
T 1db3_A 1 SKVALITGVT-GQDG-----SYLAEFLLEKGYEVHGIKR 33 (372)
T ss_dssp CCEEEEETTT-SHHH-----HHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCC-ChHH-----HHHHHHHHHCCCEEEEEEC
Confidence 6779999654 4555 5667777788999887533
No 439
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=37.12 E-value=22 Score=33.63 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|..+-.
T Consensus 13 k~vlVTGa-sggiG~-----~~a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGG-ASGLGL-----ATAERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECC-CChHHH-----HHHHHHHHCCCEEEEEeC
Confidence 68999966 578876 566778889999887643
No 440
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=37.02 E-value=22 Score=31.92 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=19.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|+ +|.||+.+|..|+..|
T Consensus 13 ~~I~l~G~--~GsGKsT~a~~L~~~l 36 (199)
T 2bwj_A 13 KIIFIIGG--PGSGKGTQCEKLVEKY 36 (199)
T ss_dssp CEEEEEEC--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899975 7889998888877765
No 441
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.99 E-value=17 Score=35.79 Aligned_cols=32 Identities=31% Similarity=0.535 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 27 k~vlVTGa-s~gIG~a-----ia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRS-----AAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6888865 66778889999887533
No 442
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=36.91 E-value=17 Score=35.11 Aligned_cols=30 Identities=43% Similarity=0.643 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 29 k~vlVTGa-s~gIG~-----aia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGA-AGGIGG-----AVVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESST-TSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999954 578886 5677888899999874
No 443
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.84 E-value=17 Score=34.94 Aligned_cols=32 Identities=28% Similarity=0.506 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...=.
T Consensus 7 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGS-SNGIGRA-----TAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CchHHHH-----HHHHHHHCCCEEEEEeC
Confidence 68999955 5888865 66778889999887533
No 444
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=36.74 E-value=1.5e+02 Score=27.88 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=21.5
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+.... . ....++.+.+.++|+.-+.
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 90 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCVD 90 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEEe
Confidence 57999999864322 1 1234566667789987553
No 445
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=36.73 E-value=22 Score=33.41 Aligned_cols=32 Identities=31% Similarity=0.496 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 3 k~vlItGa-sggiG~~-----~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTGA-SSGNGLA-----IATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CchHHHH-----HHHHHHHCCCEEEEEeC
Confidence 78999965 4888864 66778889999887533
No 446
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=36.70 E-value=17 Score=34.73 Aligned_cols=30 Identities=43% Similarity=0.521 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 7 k~vlVTGa-s~giG~~-----ia~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGG-ASGVGLE-----VVKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999954 5788864 667788899998774
No 447
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=36.56 E-value=30 Score=33.55 Aligned_cols=30 Identities=30% Similarity=0.267 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|-|+||||. . -+-+.|.+.|.++|++|..+
T Consensus 2 k~vlVTGat-G-----~iG~~l~~~L~~~G~~V~~~ 31 (322)
T 2p4h_X 2 GRVCVTGGT-G-----FLGSWIIKSLLENGYSVNTT 31 (322)
T ss_dssp CEEEEESTT-S-----HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCh-h-----HHHHHHHHHHHHCCCEEEEE
Confidence 569999654 4 44466777788899999864
No 448
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=36.51 E-value=30 Score=33.20 Aligned_cols=34 Identities=18% Similarity=0.094 Sum_probs=22.7
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHC-CCeeeEeecCc
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKAC-GLRVTSIKIDP 41 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~-g~~v~~~K~dp 41 (561)
|| |+||||+ .++|+ .+.+.|.++ |++|..+--+|
T Consensus 1 M~-ilVtGat-G~iG~-----~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGT-----HITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHH-----HHHHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHH-----HHHHHHhhCCCCcEEEEECCH
Confidence 44 8999654 55555 455556676 99999876543
No 449
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=36.49 E-value=19 Score=35.07 Aligned_cols=30 Identities=37% Similarity=0.530 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 30 k~vlVTGa-s~gIG~a-----ia~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGG-SRGIGQM-----IAQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CChHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888865 667788899998764
No 450
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=36.46 E-value=30 Score=34.11 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=23.8
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
+|-|+||||. .+ +.+.|++.|.++|++|..+-.
T Consensus 21 ~~~vlVTGat-G~-----iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGIC-GQ-----IGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp CCEEEEETTT-SH-----HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCc-cH-----HHHHHHHHHHHCCCEEEEEEC
Confidence 3569999654 44 446677778889999987644
No 451
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=36.41 E-value=21 Score=34.13 Aligned_cols=31 Identities=35% Similarity=0.479 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...=
T Consensus 8 k~vlVTGa-s~gIG~-----~ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAG-SSGLGF-----ASALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CchHHH-----HHHHHHHHCCCEEEEEe
Confidence 67999955 588886 46777888999987753
No 452
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.23 E-value=18 Score=35.02 Aligned_cols=31 Identities=29% Similarity=0.533 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...=
T Consensus 7 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGS-SNGIGRT-----TAILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CChHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999954 6888865 6677888999988753
No 453
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=36.18 E-value=21 Score=34.45 Aligned_cols=31 Identities=35% Similarity=0.491 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 22 k~vlVTGa-s~gIG~a-----ia~~l~~~G~~V~~~~ 52 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYA-----IVEELAGLGARVYTCS 52 (273)
T ss_dssp CEEEEESC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-cchHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 6888864 6677888999987753
No 454
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=36.17 E-value=1.8e+02 Score=27.42 Aligned_cols=34 Identities=18% Similarity=0.083 Sum_probs=22.5
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+.. .......++.+.+.++|+.-+.
T Consensus 60 ~~vdgiii~~~~----~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 60 RKVDAITIVPND----ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TTCSEEEECCSC----HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEecCC----hHHHHHHHHHHHHCCCeEEEEe
Confidence 579999987631 1223345667777889987654
No 455
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=36.14 E-value=19 Score=34.16 Aligned_cols=30 Identities=33% Similarity=0.505 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.|+|||| .+|+|+ ++++.|.++|++|...
T Consensus 8 k~vlITGa-sggiG~-----~~a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGS-STGLGK-----SMAIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTC-SSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CChHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 578885 5677788889988764
No 456
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=36.14 E-value=19 Score=34.06 Aligned_cols=33 Identities=39% Similarity=0.433 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHH-CCCeeeEeec
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKA-CGLRVTSIKI 39 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~-~g~~v~~~K~ 39 (561)
+|.++||| -.||+|+. +++.|.+ .|++|...-.
T Consensus 4 ~k~vlITG-as~gIG~~-----~a~~l~~~~g~~v~~~~~ 37 (244)
T 4e4y_A 4 MANYLVTG-GSKGIGKA-----VVELLLQNKNHTVINIDI 37 (244)
T ss_dssp CEEEEEET-TTSHHHHH-----HHHHHTTSTTEEEEEEES
T ss_pred CCeEEEeC-CCChHHHH-----HHHHHHhcCCcEEEEecc
Confidence 58899995 55889875 4555655 8999887644
No 457
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=36.04 E-value=28 Score=34.32 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. |-+.+.|++.|.++|++|..+-.
T Consensus 20 ~~vlVtGat------G~iG~~l~~~L~~~G~~V~~~~r 51 (347)
T 4id9_A 20 HMILVTGSA------GRVGRAVVAALRTQGRTVRGFDL 51 (347)
T ss_dssp -CEEEETTT------SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCC------ChHHHHHHHHHHhCCCEEEEEeC
Confidence 568999664 45556788888899999988755
No 458
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=36.01 E-value=16 Score=33.55 Aligned_cols=24 Identities=33% Similarity=0.432 Sum_probs=19.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|. ||.||+.++..|...|
T Consensus 13 ~~i~l~G~--sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 13 PPLVVCGP--SGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCEEEECC--TTSCHHHHHHHHHHHC
T ss_pred CEEEEECC--CCCCHHHHHHHHHHhC
Confidence 46888864 8999998888887765
No 459
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=35.98 E-value=21 Score=34.67 Aligned_cols=30 Identities=33% Similarity=0.471 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 30 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGA-GRGIGRE-----MAMELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 6888864 667788899998764
No 460
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=35.95 E-value=21 Score=34.08 Aligned_cols=30 Identities=27% Similarity=0.575 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+ ++++.|.++|++|...
T Consensus 17 k~vlITGa-sggiG~-----~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 17 KVAIITGG-AGGIGE-----TTAKLFVRYGAKVVIA 46 (278)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CCHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 678886 4667778889998775
No 461
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=35.95 E-value=19 Score=34.91 Aligned_cols=32 Identities=31% Similarity=0.455 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+. +++.|.++|++|...-.
T Consensus 29 k~vlITGa-sggIG~~-----la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGA-SKGIGRE-----MAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSC-SSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 67999955 5888864 56677788999887533
No 462
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=35.93 E-value=19 Score=34.83 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+ ++++.|.++|++|...
T Consensus 28 k~vlVTGa-s~gIG~-----aia~~la~~G~~V~~~ 57 (266)
T 3grp_A 28 RKALVTGA-TGGIGE-----AIARCFHAQGAIVGLH 57 (266)
T ss_dssp CEEEESST-TSHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHH-----HHHHHHHHCCCEEEEE
Confidence 67999955 588886 4678888999998764
No 463
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=35.82 E-value=20 Score=33.61 Aligned_cols=31 Identities=32% Similarity=0.493 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+. +++.|.++|++|...-
T Consensus 8 ~~vlVtGa-sggiG~~-----la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 8 KVSLVTGS-TRGIGRA-----IAEKLASAGSTVIITG 38 (248)
T ss_dssp CEEEETTC-SSHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CchHHHH-----HHHHHHHCCCEEEEEe
Confidence 67999955 6788765 5677778999987753
No 464
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=35.75 E-value=21 Score=35.09 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 35 k~vlVTGa-s~gIG~a-----ia~~L~~~G~~V~~~ 64 (291)
T 3cxt_A 35 KIALVTGA-SYGIGFA-----IASAYAKAGATIVFN 64 (291)
T ss_dssp CEEEEETC-SSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999955 5888865 667778899998774
No 465
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=35.75 E-value=1.5e+02 Score=27.78 Aligned_cols=37 Identities=16% Similarity=0.057 Sum_probs=23.4
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+..... .......++.+.+.++|+.-+.
T Consensus 70 ~~vdgiIi~~~~~~~-~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSAL-QTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTTS-CCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEecccccc-cCCcHHHHHHHHhcCCCEEEEe
Confidence 589999998753321 1112345566677899987664
No 466
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=35.68 E-value=33 Score=33.68 Aligned_cols=28 Identities=43% Similarity=0.493 Sum_probs=20.4
Q ss_pred EEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 4 VLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 4 i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|+||||. +++| +.|++.|.++|++|..+
T Consensus 3 vlVTGat-G~iG-----~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 3 VLVTGGS-GYIG-----SHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp EEEETTT-SHHH-----HHHHHHHHHTTCEEEEE
T ss_pred EEEECCC-CHHH-----HHHHHHHHHCCCEEEEE
Confidence 8999653 4444 56777788899998764
No 467
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=35.68 E-value=17 Score=34.84 Aligned_cols=30 Identities=23% Similarity=0.488 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|+|+. +++.|.++|++|...
T Consensus 13 k~vlVTGa-s~gIG~~-----ia~~l~~~G~~V~~~ 42 (256)
T 3gaf_A 13 AVAIVTGA-AAGIGRA-----IAGTFAKAGASVVVT 42 (256)
T ss_dssp CEEEECSC-SSHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEE
Confidence 67999954 5788865 667778889998764
No 468
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=35.63 E-value=20 Score=33.33 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|+|||| .+|+|+ .+++.|.++|++|...-.
T Consensus 6 k~vlVtGa-sggiG~-----~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGA-SRGIGE-----ATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESST-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEEC
Confidence 67999955 577775 567778889999887533
No 469
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=35.48 E-value=20 Score=33.34 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=20.1
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+++|+|+| .+|.||+.++..|+..|
T Consensus 5 ~~~I~l~G--~~GsGKsT~~~~La~~l 29 (222)
T 1zak_A 5 PLKVMISG--APASGKGTQCELIKTKY 29 (222)
T ss_dssp SCCEEEEE--STTSSHHHHHHHHHHHH
T ss_pred CeEEEEEC--CCCCCHHHHHHHHHHHh
Confidence 45788996 48999999988888765
No 470
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=35.37 E-value=20 Score=33.72 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++|++|...=.
T Consensus 7 k~vlVtGa-sggiG~-----~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGG-TLGIGL-----AIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCC-CChHHH-----HHHHHHHHCCCEEEEEeC
Confidence 67999955 577775 577778889999887533
No 471
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=35.03 E-value=32 Score=33.21 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||+ |-+.+.|.+.|.++|++|..+-.
T Consensus 8 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 8 HRILITGGA------GFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEECCC------ChHHHHHHHHHHHCCCEEEEEec
Confidence 569999654 45556788888889999988744
No 472
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=35.00 E-value=29 Score=31.38 Aligned_cols=23 Identities=35% Similarity=0.427 Sum_probs=18.3
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHH
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
.|.|+|+ +|.||+.++..|+..|
T Consensus 4 ~i~i~G~--~GsGKst~~~~la~~l 26 (208)
T 3ake_A 4 IVTIDGP--SASGKSSVARRVAAAL 26 (208)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHH
T ss_pred EEEEECC--CCCCHHHHHHHHHHhc
Confidence 6889976 6778998888887765
No 473
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=34.54 E-value=72 Score=31.83 Aligned_cols=31 Identities=35% Similarity=0.278 Sum_probs=26.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeE
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTS 36 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~ 36 (561)
+.|-||| +-||..+++-|+.+|+..|+++..
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~ 139 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGF 139 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE
Confidence 5688884 469999999999999999998753
No 474
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.49 E-value=8.7 Score=35.14 Aligned_cols=93 Identities=16% Similarity=0.230 Sum_probs=51.2
Q ss_pred ceEEEEEeccCCCcccHHHHHHHHHHcCceeeeeeeeEeecCCCccccc-cc--CCCcchhhHHHhccCCCeEEEcCCCC
Q 008567 297 SVRIAMVGKYVGLADSYLSVVKALLHACIACSLKPSIDWIAASDLEDES-AK--LTPKDHAAAWETLRNAECVLVPGGFG 373 (561)
Q Consensus 297 ~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v~v~i~~i~~~~l~~~~-~~--~d~~~~~~~~~~l~~~DGIilpGG~G 373 (561)
.-+|+.+|.= ++. ....+.+--+= +- -+..+++..++++.. .. .....+.+..+ .++|.|+|-||-.
T Consensus 26 ~~kIvf~Gs~-GvC---tPFaeL~~Yai-R~---~~~~FiP~~d~e~a~~l~~~~~G~~~~~~~~--~~~D~vVllGGLA 95 (157)
T 2r47_A 26 AERIGFAGVP-GVC---TPFAQLFAYAV-RD---KDNIFIPNTDFSKARKLEVTEYGVELGEISP--GNVDVLVLLGGLS 95 (157)
T ss_dssp CSEEEEEECT-TTT---HHHHHHHHHHT-TT---SEEEEEETTCGGGCEEEEEETTEEEEEEECC--CCEEEEEEEGGGG
T ss_pred CCeEEEECCC-eee---cCHHhhheeee-eC---CceEEcCCCChhHceEEEEecCceEeccccC--CCCCEEEEecccc
Confidence 3589999744 444 33333332221 11 145677777766421 10 00001111111 5899999999966
Q ss_pred CCc----hhHHHHHHHHHHHcCCCEEEEeh
Q 008567 374 DRG----VGGMILAAKYARENNIPYLGICL 399 (561)
Q Consensus 374 ~~~----~~g~i~~ir~a~e~~iPvLGICL 399 (561)
-|. .+...+.|....+++..+.|||.
T Consensus 96 MPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 96 MPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp STTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 553 35566666666556677999996
No 475
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=34.44 E-value=16 Score=38.47 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|| |..||+|+. +++++.|.+.|.+|...=
T Consensus 61 K~aLVT-GassGIG~A---~aia~ala~~Ga~Vi~~~ 93 (418)
T 4eue_A 61 KKVLIV-GASSGFGLA---TRISVAFGGPEAHTIGVS 93 (418)
T ss_dssp SEEEEE-SCSSHHHHH---HHHHHHHSSSCCEEEEEE
T ss_pred CEEEEE-CCCcHHHHH---HHHHHHHHhCCCEEEEEe
Confidence 679999 556899985 567788888999997643
No 476
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=34.42 E-value=24 Score=32.97 Aligned_cols=31 Identities=32% Similarity=0.508 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.++|||| .+|+|+ ++++.|.++|++|...-
T Consensus 8 ~~vlVTGa-sggiG~-----~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 8 LRALVTGA-GKGIGR-----DTVKALHASGAKVVAVT 38 (244)
T ss_dssp CEEEEEST-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCC-CchHHH-----HHHHHHHHCCCEEEEEe
Confidence 67999955 577775 46777888999988753
No 477
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=34.41 E-value=17 Score=34.85 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=24.0
Q ss_pred CE-EEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 1 MK-YVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 1 ~k-~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|| -|+||||. |-+.+.|.+.|.++|++|..+--
T Consensus 4 M~m~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN------GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT------SHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCC------CHHHHHHHHHHHhCCCEEEEecc
Confidence 45 69999654 45556788888889999888643
No 478
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=34.37 E-value=73 Score=32.14 Aligned_cols=99 Identities=16% Similarity=0.301 Sum_probs=61.1
Q ss_pred cccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhcC
Q 008567 192 QKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQLN 271 (561)
Q Consensus 192 ~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l~ 271 (561)
.|--+...+++-|.+. .|+|++|... ......++..+.+| ||+.-| + .++=+..|-+
T Consensus 76 ~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~-~-~~HPtQaLaD------------ 132 (307)
T 3tpf_A 76 SRGEPVKDTARVIGAM---VDFVMMRVNK---HETLLEFARYSKAP---VINALS-E-LYHPTQVLGD------------ 132 (307)
T ss_dssp TTSSCHHHHHHHHHHH---SSEEEEECSC---HHHHHHHHHHCSSC---EEEEEC-S-SCCHHHHHHH------------
T ss_pred CCCCCHHHHHHHHHHh---CCEEEEecCC---hHHHHHHHHhCCCC---EEeCCC-C-CcCcHHHHHH------------
Confidence 3555667778888776 6999999864 45556677666664 888876 3 4343333322
Q ss_pred CCccCCCCChhHHHHHHhhhcCCCC-ceEEEEEeccCCCcccHHHHHHHHHHcCceeee
Q 008567 272 LLSIAAPPNLQAWTKRAETYDNLKN-SVRIAMVGKYVGLADSYLSVVKALLHACIACSL 329 (561)
Q Consensus 272 l~~~~~~~~~~~w~~l~~~~~~~~~-~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v 329 (561)
+.. +.+... .-+ ++||+++||.... -.|.+.++...|+++.+
T Consensus 133 ---------l~T---i~e~~g-~l~~gl~va~vGD~~~v---a~Sl~~~~~~~G~~v~~ 175 (307)
T 3tpf_A 133 ---------LFT---IKEWNK-MQNGIAKVAFIGDSNNM---CNSWLITAAILGFEISI 175 (307)
T ss_dssp ---------HHH---HHHTTC-CGGGCCEEEEESCSSHH---HHHHHHHHHHHTCEEEE
T ss_pred ---------HHH---HHHHhC-CCCCCCEEEEEcCCCcc---HHHHHHHHHHcCCEEEE
Confidence 111 111111 113 5899999996433 37888888888876543
No 479
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=34.05 E-value=38 Score=35.42 Aligned_cols=32 Identities=34% Similarity=0.426 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.|-||| +-||+.|++-|..+|++.|++|...
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~ 136 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVG 136 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 5688884 3699999999999999999998753
No 480
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=34.03 E-value=23 Score=34.45 Aligned_cols=31 Identities=32% Similarity=0.502 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|.|+|||| .+|+|+ ++++.|.++|++|...=
T Consensus 19 k~vlVTGa-sggIG~-----~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGG-ATGIGK-----AIVKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CcHHHH-----HHHHHHHHCCCEEEEEe
Confidence 67999965 578876 56677888999987653
No 481
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=33.94 E-value=36 Score=33.08 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. |.+.+.|.+.|.++|++|..+--
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 34 (311)
T 3m2p_A 3 LKIAVTGGT------GFLGQYVVESIKNDGNTPIILTR 34 (311)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC------cHHHHHHHHHHHhCCCEEEEEeC
Confidence 569999764 55667788888889999887655
No 482
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=33.93 E-value=28 Score=31.96 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=17.2
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHH
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
.|+|+|+ +|.||+.+|..|+.-|
T Consensus 2 ~I~l~G~--~GsGKsT~a~~L~~~~ 24 (216)
T 3fb4_A 2 NIVLMGL--PGAGKGTQAEQIIEKY 24 (216)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHH
T ss_pred EEEEECC--CCCCHHHHHHHHHHHh
Confidence 3778876 6779998888776644
No 483
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=33.92 E-value=32 Score=33.82 Aligned_cols=30 Identities=37% Similarity=0.420 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|-|+||||. |-+.+.|++.|.++|++|..+
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGA------GYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTT------SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 569999654 444567777788889998875
No 484
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=33.87 E-value=23 Score=35.99 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.++||| ..+|||+ +|++.|.++|++|...=.
T Consensus 46 k~vlVTG-as~GIG~-----aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITG-ASRGIGK-----AIALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEET-TTSHHHH-----HHHHHHHTTTCEEEEEES
T ss_pred CEEEEeC-CChHHHH-----HHHHHHHHCCCEEEEEEC
Confidence 7899995 4588886 467788899999887543
No 485
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=33.86 E-value=39 Score=33.49 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=26.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHH--HCCCeeeEeecCc
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLK--ACGLRVTSIKIDP 41 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~--~~g~~v~~~K~dp 41 (561)
..|-|+|+ ||.||+.++..|+.+|. ..+-+|..+-.|-
T Consensus 81 ~iigI~G~--~GsGKSTl~~~L~~~l~~~~~~G~i~vi~~d~ 120 (308)
T 1sq5_A 81 YIISIAGS--VAVGKSTTARVLQALLSRWPEHRRVELITTDG 120 (308)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGG
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHHhhCCCCCeEEEEecCC
Confidence 46778875 78899999999999886 3333455544443
No 486
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=33.81 E-value=1.1e+02 Score=31.45 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=60.3
Q ss_pred ccccCCccchHHHHHhCCCcccEEEEeecCCCCchhhhcccccCCCCCCCeeeeCCCCCcchhcHHHHhcchhhhhhhhc
Q 008567 191 EQKTKPTQHSVRELRALGLTPHLLACRSAQPLLENTKEKLSQFCHVPIGNILNIHDVPNIWHVPLLLRNQNAHHSILKQL 270 (561)
Q Consensus 191 e~ktkptq~sv~~l~s~Gi~pd~iI~R~~~~l~~~~~~kisl~~~v~~~~Vi~~~dvdt~y~vp~~l~~qG~~~~i~~~l 270 (561)
-.|--+...+++-|.+. +|+|++|... ....+.++..+.+| ||+.-| ..+.=+..|-+
T Consensus 109 ~~kgEsl~DTarvLs~y---~D~IviR~~~---~~~~~~lA~~~~vP---VINag~--~~~HPtQaLaD----------- 166 (340)
T 4ep1_A 109 MGRGETVSDTAKVLSHY---IDGIMIRTFS---HADVEELAKESSIP---VINGLT--DDHHPCQALAD----------- 166 (340)
T ss_dssp ----CCTTHHHHHHHHH---CSEEEEECSC---HHHHHHHHHHCSSC---EEEEEC--SSCCHHHHHHH-----------
T ss_pred CCCCCCHHHHHHHHHHh---CCEEEEecCC---hhHHHHHHHhCCCC---EEeCCC--CCCCcHHHHHH-----------
Confidence 33556777888888776 7999999753 45556677777665 888766 34343333321
Q ss_pred CCCccCCCCChhHHHHHHhhhcCCCCceEEEEEeccCCCcccHHHHHHHHHHcCceeee
Q 008567 271 NLLSIAAPPNLQAWTKRAETYDNLKNSVRIAMVGKYVGLADSYLSVVKALLHACIACSL 329 (561)
Q Consensus 271 ~l~~~~~~~~~~~w~~l~~~~~~~~~~~~Iavvgky~~~~DaY~Si~~aL~~ag~~~~v 329 (561)
+.. +.+... .-+++||+++||... .-.|.+.++...|+++.+
T Consensus 167 ----------l~T---I~E~~G-~l~glkva~vGD~~n---va~Sl~~~~~~~G~~v~~ 208 (340)
T 4ep1_A 167 ----------LMT---IYEETN-TFKGIKLAYVGDGNN---VCHSLLLASAKVGMHMTV 208 (340)
T ss_dssp ----------HHH---HHHHHS-CCTTCEEEEESCCCH---HHHHHHHHHHHHTCEEEE
T ss_pred ----------HHH---HHHHhC-CCCCCEEEEECCCch---hHHHHHHHHHHcCCEEEE
Confidence 111 111111 124689999998733 237888888888876544
No 487
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=33.74 E-value=35 Score=34.26 Aligned_cols=32 Identities=28% Similarity=0.251 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. .+|| +.|++.|.++|++|..+--
T Consensus 29 k~vlVtGat-G~IG-----~~l~~~L~~~g~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGIT-GQDG-----SYLTEFLLGKGYEVHGLIR 60 (381)
T ss_dssp CEEEEETTT-SHHH-----HHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEcCC-chHH-----HHHHHHHHHCCCEEEEEec
Confidence 679999653 4444 6677778889999987644
No 488
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=33.66 E-value=37 Score=31.29 Aligned_cols=27 Identities=37% Similarity=0.538 Sum_probs=19.0
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRV 34 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v 34 (561)
+.|.|+|+ +|.||+.++..|+. .|+.+
T Consensus 5 ~~I~i~G~--~GSGKST~~~~L~~----lg~~~ 31 (218)
T 1vht_A 5 YIVALTGG--IGSGKSTVANAFAD----LGINV 31 (218)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHH----TTCEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHH----cCCEE
Confidence 47889975 78899876666554 57643
No 489
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.58 E-value=41 Score=31.20 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+|||| .+++|+ .+.+.|.++|++|..+-.
T Consensus 22 ~~ilVtGa-tG~iG~-----~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 22 MRVLVVGA-NGKVAR-----YLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp CEEEEETT-TSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CeEEEECC-CChHHH-----HHHHHHHhCCCeEEEEEC
Confidence 45899954 466664 566777789999988755
No 490
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.54 E-value=23 Score=32.87 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCC--CeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACG--LRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g--~~v~~~K~ 39 (561)
|.++|||| .+|+|+ ++++.|.++| ++|..+-.
T Consensus 4 k~vlItGa-sggiG~-----~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 4 GSVVVTGA-NRGIGL-----GLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp SEEEESSC-SSHHHH-----HHHHHHHTCTTCCEEEEEES
T ss_pred CEEEEecC-CchHHH-----HHHHHHHhcCCCcEEEEEec
Confidence 68999955 578876 4667788899 99887654
No 491
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=33.44 E-value=1.5e+02 Score=27.52 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=20.2
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGI 397 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGI 397 (561)
.++||||+.+.... . . ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~-~---~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPP-E-D---DSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCS-S-C---CHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCccc-c-H---HHHHHHHHcCCCEEEE
Confidence 48999999875422 1 1 2344556678898654
No 492
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=33.41 E-value=40 Score=33.68 Aligned_cols=32 Identities=25% Similarity=0.186 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|-|+||||. .++ .+.|++.|.++|++|..+-.
T Consensus 25 ~~vlVtGat-G~i-----G~~l~~~L~~~g~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGIT-GQD-----GSYLAEFLLEKGYEVHGIVR 56 (375)
T ss_dssp CEEEEETTT-SHH-----HHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEECCC-chH-----HHHHHHHHHHCCCEEEEEEC
Confidence 679999664 444 46677778889999987644
No 493
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=33.25 E-value=19 Score=36.02 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .||+|+. |++.|.++|++|..+
T Consensus 3 k~vlVTGa-s~GIG~a-----la~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGC-SSGIGLH-----LAVRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCC-SSHHHHH-----HHHHHHTCTTCCEEE
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCceEEE
Confidence 78999955 5888865 677888899987654
No 494
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=33.23 E-value=26 Score=31.66 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=22.9
Q ss_pred CEEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeecC
Q 008567 1 MKYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKID 40 (561)
Q Consensus 1 ~k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~d 40 (561)
|| |+|||| .+++|+. +++.|. +|++|...-.+
T Consensus 4 M~-vlVtGa-sg~iG~~-----~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 4 MK-ILLIGA-SGTLGSA-----VKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CE-EEEETT-TSHHHHH-----HHHHHT-TTSEEEEEESS
T ss_pred cE-EEEEcC-CcHHHHH-----HHHHHH-CCCeEEEEecC
Confidence 45 899965 4777754 566677 89999886553
No 495
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=33.21 E-value=1.5e+02 Score=27.47 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=20.9
Q ss_pred cCCCeEEEcCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008567 361 RNAECVLVPGGFGDRGVGGMILAAKYARENNIPYLGIC 398 (561)
Q Consensus 361 ~~~DGIilpGG~G~~~~~g~i~~ir~a~e~~iPvLGIC 398 (561)
.++||||+.+.... . ..++.+.+.++|+.-+.
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~~ 89 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEIA 89 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEES
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEEe
Confidence 57999998864322 1 33455566789987663
No 496
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=32.73 E-value=33 Score=29.94 Aligned_cols=23 Identities=22% Similarity=0.182 Sum_probs=18.2
Q ss_pred EEEEeCCccCCCchHHHHHHHHHHH
Q 008567 3 YVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 3 ~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
.|+++|+ +|.||+.++..|...|
T Consensus 2 ~I~l~G~--~GsGKsT~a~~L~~~l 24 (168)
T 2pt5_A 2 RIYLIGF--MCSGKSTVGSLLSRSL 24 (168)
T ss_dssp EEEEESC--TTSCHHHHHHHHHHHH
T ss_pred eEEEECC--CCCCHHHHHHHHHHHh
Confidence 5888865 7889998888877755
No 497
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=32.73 E-value=35 Score=33.11 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEee
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIK 38 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K 38 (561)
|-|+||||. |-+.+.|.+.|.++|++|..+-
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGAT------GLLGRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHTTTCEEEEEC
T ss_pred CeEEEECCC------cHHHHHHHHHHHhCCCeEEEEc
Confidence 569999654 4455677788888999998764
No 498
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=32.71 E-value=23 Score=33.70 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEeec
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSIKI 39 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~K~ 39 (561)
|.|+|||| .+|+|+. +++.|.++|++|...-.
T Consensus 15 k~vlITGa-sggiG~~-----la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHA-----IVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 67999955 6788864 66777789999887543
No 499
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=32.69 E-value=37 Score=30.88 Aligned_cols=24 Identities=38% Similarity=0.502 Sum_probs=19.1
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHH
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVL 27 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll 27 (561)
+.|+++|+ +|.||+.+|..|+..|
T Consensus 21 ~~I~l~G~--~GsGKST~a~~La~~l 44 (201)
T 2cdn_A 21 MRVLLLGP--PGAGKGTQAVKLAEKL 44 (201)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHh
Confidence 46889975 7889999888887765
No 500
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=32.63 E-value=20 Score=35.81 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCCchHHHHHHHHHHHHHCCCeeeEe
Q 008567 2 KYVLVTGGVVSGLGKGVTASSVGVVLKACGLRVTSI 37 (561)
Q Consensus 2 k~i~v~ggv~S~~GKg~~~~s~~~ll~~~g~~v~~~ 37 (561)
|.++|||| .+|||+. +++.|.++|++|...
T Consensus 10 k~~lVTGa-s~GIG~~-----~a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGA-GGGLGRA-----YALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTT-TSHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHH-----HHHHHHHCCCEEEEE
Confidence 68999955 5888875 567788899998874
Done!