Query 008568
Match_columns 561
No_of_seqs 264 out of 1310
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 06:35:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f9u_A CG32412; alpha/beta hyd 100.0 3E-30 1E-34 266.1 19.6 213 199-425 65-299 (312)
2 4fai_A CG5976, isoform B; alph 100.0 4.1E-30 1.4E-34 267.8 19.7 211 199-424 92-323 (330)
3 3pb6_X Glutaminyl-peptide cycl 100.0 4.5E-28 1.5E-32 252.5 23.3 212 199-424 95-328 (330)
4 4fuu_A Leucine aminopeptidase; 100.0 1.6E-28 5.5E-33 253.2 19.4 203 199-426 81-307 (309)
5 3tc8_A Leucine aminopeptidase; 99.9 1.5E-26 5.1E-31 239.0 20.5 201 199-420 81-306 (309)
6 3gux_A Putative Zn-dependent e 99.9 1.1E-26 3.9E-31 240.4 17.8 203 199-426 83-312 (314)
7 2afw_A Glutaminyl-peptide cycl 99.9 6.8E-26 2.3E-30 235.7 22.3 209 199-424 87-327 (329)
8 3iib_A Peptidase M28; YP_92679 99.9 8.9E-26 3E-30 243.9 21.4 237 145-422 193-429 (444)
9 2ek8_A Aminopeptidase; metallo 99.9 1E-23 3.5E-28 226.0 30.8 289 74-430 112-402 (421)
10 1tkj_A Aminopeptidase, SGAP; d 99.9 3.6E-24 1.2E-28 218.0 21.5 197 200-423 64-275 (284)
11 1rtq_A Bacterial leucyl aminop 99.9 4.5E-23 1.5E-27 211.2 20.6 204 199-428 74-287 (299)
12 3kas_A Transferrin receptor pr 99.9 1.4E-22 4.8E-27 227.2 15.1 262 146-431 210-485 (640)
13 3k9t_A Putative peptidase; str 99.9 1.9E-20 6.4E-25 197.8 22.4 185 200-425 165-355 (435)
14 3fed_A Glutamate carboxypeptid 99.8 4E-20 1.4E-24 209.3 15.8 260 146-430 247-547 (707)
15 4h2k_A Succinyl-diaminopimelat 99.4 2.4E-11 8.1E-16 122.2 19.5 193 200-423 51-266 (269)
16 3t68_A Succinyl-diaminopimelat 99.4 1.3E-11 4.4E-16 124.0 16.5 193 200-423 51-266 (268)
17 2wyr_A Cobalt-activated peptid 99.2 3.5E-10 1.2E-14 116.8 16.6 149 241-421 171-330 (332)
18 1vhe_A Aminopeptidase/glucanas 99.1 7.4E-10 2.5E-14 116.4 17.3 153 241-422 182-351 (373)
19 1y0y_A FRV operon protein FRVX 99.1 1.2E-09 4.1E-14 113.8 16.6 150 241-422 180-347 (353)
20 2gre_A Deblocking aminopeptida 99.1 8.1E-10 2.8E-14 115.0 13.8 150 241-421 184-343 (349)
21 2fvg_A Endoglucanase; TM1049, 99.0 1.6E-09 5.4E-14 112.3 11.2 153 241-422 165-332 (340)
22 1q7l_A Aminoacylase-1; catalys 98.9 5.7E-09 2E-13 100.1 10.7 86 200-294 58-161 (198)
23 2zog_A Cytosolic non-specific 98.7 7.2E-08 2.4E-12 103.9 11.3 101 201-311 83-200 (479)
24 3n5f_A L-carbamoylase, N-carba 98.6 1.2E-07 4E-12 100.4 12.3 80 201-294 58-142 (408)
25 3ct9_A Acetylornithine deacety 98.6 8.2E-08 2.8E-12 99.9 10.8 97 200-312 52-164 (356)
26 3dlj_A Beta-Ala-His dipeptidas 98.6 1.4E-07 4.7E-12 102.3 11.2 103 200-312 89-208 (485)
27 1cg2_A Carboxypeptidase G2; me 98.6 1.3E-07 4.4E-12 99.4 9.3 98 200-312 70-180 (393)
28 2pok_A Peptidase, M20/M25/M40 98.5 2.2E-07 7.4E-12 100.5 11.2 102 200-311 92-210 (481)
29 3pfo_A Putative acetylornithin 98.5 2.6E-07 8.8E-12 98.1 9.7 100 199-313 89-205 (433)
30 1ylo_A Hypothetical protein SF 98.4 6.1E-06 2.1E-10 85.1 17.1 151 241-421 167-334 (348)
31 3ife_A Peptidase T; metallopep 98.3 9E-07 3.1E-11 94.4 8.3 98 200-311 80-224 (434)
32 3gb0_A Peptidase T; NP_980509. 98.3 1.4E-06 4.8E-11 90.7 9.3 98 200-312 56-167 (373)
33 3tx8_A Succinyl-diaminopimelat 98.3 2.8E-06 9.7E-11 88.2 11.4 97 201-311 58-166 (369)
34 1vgy_A Succinyl-diaminopimelat 98.3 3.8E-06 1.3E-10 88.2 11.9 98 200-310 51-166 (393)
35 3pfe_A Succinyl-diaminopimelat 98.3 2.5E-06 8.7E-11 92.1 10.6 99 200-311 77-192 (472)
36 1xmb_A IAA-amino acid hydrolas 98.2 4.3E-06 1.5E-10 88.7 12.0 93 200-310 71-176 (418)
37 2rb7_A Peptidase, M20/M25/M40 98.2 9.1E-07 3.1E-11 92.2 6.5 97 201-311 51-164 (364)
38 1z2l_A Allantoate amidohydrola 98.2 1.5E-06 5.2E-11 92.0 7.6 79 201-293 62-145 (423)
39 1ysj_A Protein YXEP; M20 famil 98.2 6.8E-06 2.3E-10 86.8 12.0 95 200-309 76-181 (404)
40 1vho_A Endoglucanase; structur 98.2 5.4E-05 1.9E-09 78.1 17.7 152 241-422 170-333 (346)
41 3isz_A Succinyl-diaminopimelat 98.2 7.8E-06 2.7E-10 84.6 11.3 98 200-310 48-163 (377)
42 3khx_A Putative dipeptidase sa 98.1 5.1E-06 1.7E-10 90.3 9.4 84 202-295 88-186 (492)
43 2v8h_A Beta-alanine synthase; 98.1 4.6E-06 1.6E-10 90.2 8.7 78 201-293 93-175 (474)
44 2f7v_A Aectylcitrulline deacet 98.1 6E-06 2.1E-10 86.0 9.1 87 200-312 58-160 (369)
45 3rza_A Tripeptidase; phosphory 98.1 5.1E-06 1.7E-10 87.4 8.6 100 199-311 73-187 (396)
46 1fno_A Peptidase T; metallo pe 98.1 6.2E-06 2.1E-10 87.2 8.2 98 200-312 55-198 (417)
47 1lfw_A PEPV; hydrolase, dipept 98.0 1.4E-05 4.7E-10 85.8 10.4 81 202-294 70-166 (470)
48 3cpx_A Aminopeptidase, M42 fam 98.0 3E-05 1E-09 79.7 11.6 149 241-421 163-319 (321)
49 3ram_A HMRA protein; two-domai 97.9 1.8E-05 6.3E-10 83.4 9.3 95 200-311 61-157 (394)
50 2qyv_A XAA-His dipeptidase; YP 97.9 1.3E-05 4.5E-10 86.6 7.6 96 201-312 54-172 (487)
51 3io1_A Aminobenzoyl-glutamate 97.9 3.6E-05 1.2E-09 82.5 10.8 96 200-310 96-209 (445)
52 3mru_A Aminoacyl-histidine dip 97.9 1.7E-05 5.7E-10 86.3 7.3 95 201-311 57-174 (490)
53 3kl9_A PEPA, glutamyl aminopep 97.6 0.00052 1.8E-08 71.8 13.6 153 237-420 176-341 (355)
54 2vpu_A TET3, 354AA long hypoth 96.2 0.054 1.8E-06 56.4 14.2 151 238-421 180-345 (354)
55 3isx_A Endoglucanase; TM1050, 95.5 0.049 1.7E-06 56.6 10.0 151 238-419 175-340 (343)
56 2wzn_A TET3, 354AA long hypoth 87.7 0.016 5.3E-07 57.0 -6.0 80 201-293 53-139 (354)
57 2ijz_A Probable M18-family ami 67.0 5.2 0.00018 42.5 5.1 155 237-410 229-415 (428)
58 3kl9_A PEPA, glutamyl aminopep 65.4 3.6 0.00012 42.6 3.3 29 200-233 45-73 (355)
59 2glf_A Probable M18-family ami 63.7 26 0.0009 37.4 9.8 153 238-410 244-440 (450)
60 3vat_A Dnpep, aspartyl aminope 53.8 33 0.0011 37.2 8.4 168 238-416 280-482 (496)
61 2vpu_A TET3, 354AA long hypoth 50.9 7.9 0.00027 40.0 3.0 26 200-233 52-77 (354)
62 3isx_A Endoglucanase; TM1050, 44.0 13 0.00043 38.3 3.2 26 200-233 53-78 (343)
63 1q7l_B Aminoacylase-1; catalys 38.1 1.1E+02 0.0038 24.1 7.5 77 335-424 3-79 (88)
64 1y7e_A Probable M18-family ami 36.8 11 0.00037 40.5 1.3 159 238-416 250-452 (458)
65 2glj_A Probable M18-family ami 26.7 29 0.001 37.1 2.6 44 238-289 256-299 (461)
66 4gc0_A D-xylose-proton symport 24.8 38 0.0013 34.6 3.0 31 531-561 458-489 (491)
No 1
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.97 E-value=3e-30 Score=266.06 Aligned_cols=213 Identities=14% Similarity=0.099 Sum_probs=149.0
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-CCCCCccchhHHHHHHHHHHHHhhcccCC-CCCCCceeEEEE
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-ALSVGSDSNGSGVVALLEVARLFSLLYSN-PKTRGRYNILFG 276 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-~~~~GAdDNaSGvaaLLELAR~fs~l~~~-~~~~~~~nIlF~ 276 (561)
...||+|+++|.. .++|||+|||||.+... ...+||+|||||||+|||+||.|+++... .+.+|+++|+|+
T Consensus 65 ~~~Nii~~~~~~~-------~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv 137 (312)
T 4f9u_A 65 TFANVVGTINPQA-------QNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLI 137 (312)
T ss_dssp EEEEEEEEESTTS-------SEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEE
T ss_pred eEEEEEEEECCCC-------CceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEE
Confidence 4789999999843 45999999999997643 35789999999999999999999875321 134789999999
Q ss_pred EeCCCCCC--------CcchHHHHHhcch-----------hhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHH
Q 008568 277 LTSGGPYN--------YNGTHKWLRSFDQ-----------RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFE 337 (561)
Q Consensus 277 ~~~gEe~g--------~~GS~~~v~~~~~-----------~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~ 337 (561)
||+|||.| ++||++|++++.. ..+++|.++||+||+|..+..+..+..... .....+.
T Consensus 138 ~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~---~~~~~~~ 214 (312)
T 4f9u_A 138 FFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTD---GLHSSLV 214 (312)
T ss_dssp EESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGH---HHHHHHH
T ss_pred EecCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccc---hhhhHHH
Confidence 99999988 9999999997531 235789999999999987333333222111 1112222
Q ss_pred HHHHHHHHhCCeeeec-cccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 338 GFTNVAEELGFKVGLK-HKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 338 ~l~~~a~~~~i~v~~~-~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
.+.+.....+...... ............+||.+|.++|||++.+.+...++ .+||..||+++||++.|++.++++
T Consensus 215 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~~GIP~l~~~~~~~~~----~yHt~~Dt~d~id~~~l~~~~~i~ 290 (312)
T 4f9u_A 215 QIEKSLRTAGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFPD----VWHTPRDNAANLHWPSIRNFNRVF 290 (312)
T ss_dssp HHHHHHHHTTCSSSSCCCEEEEECSSCCCCTTHHHHTTTCCEEEEECSSCCT----TTTSTTCSGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccccccccccCCCCCCCchHHHHHCCCCEEEEECCCCCC----CCCCCccChhhCCHHHHHHHHHHH
Confidence 2222222221110000 00001112234689999999999999998765422 347999999999999999988888
Q ss_pred HHHHHHHHh
Q 008568 417 AESLARHIY 425 (561)
Q Consensus 417 aeaLa~~iy 425 (561)
+..++.+|-
T Consensus 291 ~~fv~e~l~ 299 (312)
T 4f9u_A 291 RNFVYQYLK 299 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 877777764
No 2
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.97 E-value=4.1e-30 Score=267.76 Aligned_cols=211 Identities=11% Similarity=0.121 Sum_probs=146.9
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEe
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLT 278 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~ 278 (561)
...||+|+++|.. .++|||+|||||.+......+||+|||||+|+|||+||.|++... +..+|+++|+|+||
T Consensus 92 ~~~Nii~~~~~~~-------~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~-~~~~p~rtI~fv~f 163 (330)
T 4fai_A 92 HFHNIIATLNPNA-------ERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLK-PLKKSKLSLMLLFF 163 (330)
T ss_dssp EEEEEEEESCTTC-------SEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHG-GGGTSSEEEEEEEE
T ss_pred eEEEEEEEECCCC-------CcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhh-ccCCCCccEEEEEe
Confidence 4789999998833 459999999999987666689999999999999999999987532 23468999999999
Q ss_pred CCCCCCC--------cchHHHHHhcch-hhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHHHHHHHHHHhCCe
Q 008568 279 SGGPYNY--------NGTHKWLRSFDQ-RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFK 349 (561)
Q Consensus 279 ~gEe~g~--------~GS~~~v~~~~~-~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~ 349 (561)
+|||.|+ +||++|++++.. ..+++|.++|||||+|..+..++.+..... ... ..+..++......+..
T Consensus 164 dgEE~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~--~~~-~~~~~~~~~~~~~~~~ 240 (330)
T 4fai_A 164 DGEEAFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTE--SWY-MRIQSVETRLAKLQLL 240 (330)
T ss_dssp SCCSCSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGH--HHH-HHHHHHHHHHHHTTC-
T ss_pred ccccccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcc--hHH-HHHHHHHHHhhhhhhh
Confidence 9999995 799999998532 246899999999999987333333222111 111 1111111111111110
Q ss_pred eeec------------cccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHH
Q 008568 350 VGLK------------HKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVA 417 (561)
Q Consensus 350 v~~~------------~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~va 417 (561)
-... ............+||.+|.++|||++.+.+.+.++ .+||..||+++||++.+...+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~~GIP~l~~i~~~~~~----~yHT~~Dt~d~iD~~tl~~~~~ii~ 316 (330)
T 4fai_A 241 ERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLRRNVPILHLIPVPFPS----VWHTPDDNASVIDYATTDNLALIIR 316 (330)
T ss_dssp --------------CCEEEEEETTCCCCSTTHHHHTTTCCEEEECCSSCCT----TTTSTTSSGGGCCHHHHHHHHHHHH
T ss_pred hhhhccccccccccccccccCCCCCCCCCchHHHHHCCCCEEEEECCCCCC----CCCCCcCChhhCCHHHHHHHHHHHH
Confidence 0000 00000111234689999999999999998765543 3478899999999999988888777
Q ss_pred HHHHHHH
Q 008568 418 ESLARHI 424 (561)
Q Consensus 418 eaLa~~i 424 (561)
.-++.+|
T Consensus 317 ~Fv~EyL 323 (330)
T 4fai_A 317 LFALEYL 323 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666655
No 3
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.96 E-value=4.5e-28 Score=252.45 Aligned_cols=212 Identities=16% Similarity=0.158 Sum_probs=150.0
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC--CCCCCccchhHHHHHHHHHHHHhhcccCCC-CCCCceeEEE
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP--ALSVGSDSNGSGVVALLEVARLFSLLYSNP-KTRGRYNILF 275 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~--~~~~GAdDNaSGvaaLLELAR~fs~l~~~~-~~~~~~nIlF 275 (561)
...||+|+++|.. .++|+++|||||++... ...+||+|||||+|++||+||.|++..... +.+|+++|.|
T Consensus 95 ~~~Nvia~~~g~~-------~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~f 167 (330)
T 3pb6_X 95 DFGNVVATLDPRA-------ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQL 167 (330)
T ss_dssp EEEEEEEESCTTS-------SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEE
T ss_pred cceEEEEEECCCC-------CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEE
Confidence 4789999999843 46999999999987522 357999999999999999999998741000 1357999999
Q ss_pred EEeCCCCC--------CCcchHHHHHhcch-------hhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHHHHH
Q 008568 276 GLTSGGPY--------NYNGTHKWLRSFDQ-------RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFT 340 (561)
Q Consensus 276 ~~~~gEe~--------g~~GS~~~v~~~~~-------~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~ 340 (561)
++|+|||. |++||++|++++.. ..+++|.++|||||+|+.+..++.+. +......+.+..++
T Consensus 168 v~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~---~~t~~~~~~l~~i~ 244 (330)
T 3pb6_X 168 LFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHF---PRTVRWFHRLRSIE 244 (330)
T ss_dssp EEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCC---GGGHHHHHHHHHHH
T ss_pred EEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeec---CcchHHHHHHHHHH
Confidence 99999999 99999999987542 24789999999999999733332211 11111112223333
Q ss_pred HHHHHhCCeeee-cccc-c--cCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 341 NVAEELGFKVGL-KHKK-I--NISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 341 ~~a~~~~i~v~~-~~~k-i--n~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
+.+++.|.-... ...+ + ........+||.+|.++|||++.+.+.+.++ .+|+..||.++||++.|.+.++++
T Consensus 245 ~~~~~~g~~~~~p~~~~~f~~~~~~~~~~SDH~pF~~~GIP~~~~~~~~f~~----~yHt~~Dt~d~id~~~l~~~~~i~ 320 (330)
T 3pb6_X 245 KRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRRGVPVLHLISTPFPA----VWHTPADTEVNLHPPTVHNLCRIL 320 (330)
T ss_dssp HHHHHTTCCSSCCSSCSSBCSSCSSCCCSCTTHHHHTTTCCEEEEECSSCCT----TTTSTTCSGGGSCHHHHHHHHHHH
T ss_pred HHHHHcCccccCCcccccccccccCCCCCCchHhHHHCCCCEEEEEcCCCCC----CCCCCcCchhhCCHHHHHHHHHHH
Confidence 333333431100 0000 0 0112245799999999999999998765433 347899999999999999999999
Q ss_pred HHHHHHHH
Q 008568 417 AESLARHI 424 (561)
Q Consensus 417 aeaLa~~i 424 (561)
+.-++.+|
T Consensus 321 ~~fv~Eyl 328 (330)
T 3pb6_X 321 AVFLAEYL 328 (330)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887765
No 4
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.6e-28 Score=253.22 Aligned_cols=203 Identities=20% Similarity=0.276 Sum_probs=146.1
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------CCCCCccchhHHHHHHHHHHHHhhcccCCCCCCC
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~ 269 (561)
...||+|+++|.. .++|||+|||||.+..+ ...+||+|||||+|+|||+||.|++. +|
T Consensus 81 ~~~Nii~~~~g~~-------~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~------~~ 147 (309)
T 4fuu_A 81 KARNIIGSYKPES-------KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ------QP 147 (309)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS------CC
T ss_pred eeEEEEEEECCCC-------CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc------CC
Confidence 4789999999843 46999999999998754 24689999999999999999999874 46
Q ss_pred ceeEEEEEeCCCCCCC--------------cchHHHHHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHH
Q 008568 270 RYNILFGLTSGGPYNY--------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQI 335 (561)
Q Consensus 270 ~~nIlF~~~~gEe~g~--------------~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l 335 (561)
+++|+|+||+|||.|+ +||++|++++.. ..++|.++|||||+|.. +..+...... ......+
T Consensus 148 ~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~-~~~~i~~~inlDmvG~~-~~~~~~~~~~--~~~~~~~ 223 (309)
T 4fuu_A 148 ELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHV-QGYNARFGILLDMVGGE-NSVFLKEGYS--EEFAPDI 223 (309)
T ss_dssp SSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSS-TTCCCSEEEEECSCCBT-TCCEEECHHH--HHHCHHH
T ss_pred CCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccc-cCcceEEEEeeeccCCC-CCceEeecCc--hhhhHHH
Confidence 8999999999999995 899999997543 46889999999999986 4444332211 1112344
Q ss_pred HHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhc-CCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHH
Q 008568 336 FEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVK 414 (561)
Q Consensus 336 ~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~-~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~ 414 (561)
.+.+.+.+...+......... .....+||.+|.+ .|||++.+.....+..++..+||..||+++||.+.|+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~----~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~--- 296 (309)
T 4fuu_A 224 NKKVWKAAKKAGYGKTFIDER----GDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKA--- 296 (309)
T ss_dssp HHHHHHHHHHTTCTTTEEEEE----CCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHH---
T ss_pred HHHHHHHHHhcCCcccccccC----CCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHH---
Confidence 555555555544322211111 1234579999997 69999988754332222334589999999999998865
Q ss_pred HHHHHHHHHHhh
Q 008568 415 LVAESLARHIYG 426 (561)
Q Consensus 415 ~vaeaLa~~iy~ 426 (561)
+++.+..+||+
T Consensus 297 -vg~~vl~~ly~ 307 (309)
T 4fuu_A 297 -VGQTVLEVIYN 307 (309)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHhh
Confidence 56677777775
No 5
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.94 E-value=1.5e-26 Score=238.99 Aligned_cols=201 Identities=19% Similarity=0.201 Sum_probs=147.1
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------CCCCCccchhHHHHHHHHHHHHhhcccCCCCCCC
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~ 269 (561)
...||+|+++|.. .++|+++|||||++..+ ...+||+||+||+|++||+||.|++. +|
T Consensus 81 ~~~Nvia~~~g~~-------~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~------~~ 147 (309)
T 3tc8_A 81 EARNIIGSFDPEN-------SKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK------AP 147 (309)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS------CC
T ss_pred cceEEEEEECCCC-------CceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC------CC
Confidence 3689999999832 46999999999998642 23489999999999999999999874 37
Q ss_pred ceeEEEEEeCCCCCCC-------------cchHHHHHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHH
Q 008568 270 RYNILFGLTSGGPYNY-------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIF 336 (561)
Q Consensus 270 ~~nIlF~~~~gEe~g~-------------~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~ 336 (561)
+++|.|++|++||.|+ +||++|++++.. ..++|.++|||||+|..+..++.+. .. .....+++
T Consensus 148 ~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~-~~~~~~~~inlD~~G~~~~~~~~~~--~~-~~~~~~l~ 223 (309)
T 3tc8_A 148 GIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHV-PNYTAEYGILLDMVGGKNATFFKEQ--QS-LRAAAPIV 223 (309)
T ss_dssp SSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSS-TTCCCSEEEEEESCCBTTCCEEECH--HH-HHHHHHHH
T ss_pred CCcEEEEEECccccccccccccccccccchhHHHHHhCCCc-cccceEEEEEecccCCCCCceeecc--cc-cchHHHHH
Confidence 8999999999999999 999999997542 3578999999999999733333221 10 11124566
Q ss_pred HHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhc-CCCeEEEEeccCC--CCCccccCCCCCCCcCCCCHHHHHHHH
Q 008568 337 EGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSA--APELLESTGGLLDSRHFVDETSFIRSV 413 (561)
Q Consensus 337 ~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~-~gIPAvtls~~~~--~~d~~~~r~si~Dt~d~id~~~L~~~~ 413 (561)
+.+++.++.+|+...+.... .....+||.+|.+ +|||++.+..... ...++..+||..||.++||++.|++.+
T Consensus 224 ~~~~~~a~~~g~~~~f~~~~----~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 224 EMVWSAARDLGYGKYFINAA----GGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHTCTTTEEEEE----CCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHcCCcceeccCC----CCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 77777677666532222111 2245789999999 8999999976421 011223458999999999999998765
Q ss_pred HHHHHHH
Q 008568 414 KLVAESL 420 (561)
Q Consensus 414 ~~vaeaL 420 (561)
+++.+.|
T Consensus 300 ~~~~~~v 306 (309)
T 3tc8_A 300 QTVLEVI 306 (309)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544433
No 6
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.94 E-value=1.1e-26 Score=240.40 Aligned_cols=203 Identities=18% Similarity=0.212 Sum_probs=130.1
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------CCCCCccchhHHHHHHHHHHHHhhcccCCCCCCC
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~ 269 (561)
...||+|+++|.. .++|+++|||||++..+ ...+||+||+||+|++||+||.|++. ++
T Consensus 83 ~~~Nvia~~~g~~-------~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~------~~ 149 (314)
T 3gux_A 83 KSRNIIGAYKPES-------KKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE------QP 149 (314)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS------CC
T ss_pred cceEEEEEECCCC-------CceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC------CC
Confidence 3689999999842 46999999999998632 24589999999999999999999874 37
Q ss_pred ceeEEEEEeCCCCCCC--------------cchHHHHHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHH
Q 008568 270 RYNILFGLTSGGPYNY--------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQI 335 (561)
Q Consensus 270 ~~nIlF~~~~gEe~g~--------------~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l 335 (561)
+++|.|++|++||.|+ +||++|++++.. ..++|.++|||||+|..+..+|.+ ... ......+
T Consensus 150 ~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~-~~~~~~~~inlDm~G~~~~~~~~~--g~~-~~~~~~l 225 (314)
T 3gux_A 150 ALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHV-QNYNARYGILLDMVGGKDATFYYE--GYS-ARTARSE 225 (314)
T ss_dssp SSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSS-TTCCCSEEEEEESCCBTTCCEEEC--TTH-HHHCHHH
T ss_pred CCcEEEEEECCccccccccccccccccccchhHHHHHhCCcc-cccceeEEEEEeccCCCCCceeee--ccc-cccHHHH
Confidence 8999999999999999 999999997532 357899999999999974444432 111 1112456
Q ss_pred HHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhc-CCCeEEEEeccCC---CCCccccCCCCCCCcCCCCHHHHHH
Q 008568 336 FEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSA---APELLESTGGLLDSRHFVDETSFIR 411 (561)
Q Consensus 336 ~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~-~gIPAvtls~~~~---~~d~~~~r~si~Dt~d~id~~~L~~ 411 (561)
++.+++.++.++......... .....+||.+|.+ +|||++.+..... ...++..+||..||.++||++.|++
T Consensus 226 ~~~~~~~~~~~g~~~~f~~~~----~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~ 301 (314)
T 3gux_A 226 MKKIWKKAHELGYGKYFVKED----GGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKA 301 (314)
T ss_dssp HHHHHHHHHHHTCTTTEEEEE----CCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHH
T ss_pred HHHHHHHHHHcCCcccccccc----CCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHH
Confidence 666666666666432221111 2245799999999 8999999976421 0111124579999999999999887
Q ss_pred HHHHHHHHHHHHHhh
Q 008568 412 SVKLVAESLARHIYG 426 (561)
Q Consensus 412 ~~~~vaeaLa~~iy~ 426 (561)
.++ .+..+||+
T Consensus 302 ~~~----~~~~~~y~ 312 (314)
T 3gux_A 302 VGQ----TVMDVIYN 312 (314)
T ss_dssp HHH----HHHHHHHT
T ss_pred HHH----HHHHHHhh
Confidence 554 55566665
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.94 E-value=6.8e-26 Score=235.66 Aligned_cols=209 Identities=16% Similarity=0.184 Sum_probs=146.1
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCC---CCCCCCccchhHHHHHHHHHHHHhhcccCC----CCCCCce
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA---PALSVGSDSNGSGVVALLEVARLFSLLYSN----PKTRGRY 271 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~---~~~~~GAdDNaSGvaaLLELAR~fs~l~~~----~~~~~~~ 271 (561)
...||+|+++|.. .++|+++|||||++.. ....+||+||+||+|++||+||.|++.... ++.+|++
T Consensus 87 ~~~Nvi~~~~g~~-------~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~ 159 (329)
T 2afw_A 87 SFSNIISTLNPTA-------KRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDL 159 (329)
T ss_dssp EEEEEEEESSTTS-------SEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCE
T ss_pred eEeEEEEEECCCC-------CcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCc
Confidence 4789999998842 5799999999999864 124689999999999999999999875210 0125789
Q ss_pred eEEEEEeCCCCC--------CCcchHHHHHhcch----------hhhcCeeEEEEeccccCCCCceeEEeccCCchhHHH
Q 008568 272 NILFGLTSGGPY--------NYNGTHKWLRSFDQ----------RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIK 333 (561)
Q Consensus 272 nIlF~~~~gEe~--------g~~GS~~~v~~~~~----------~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~ 333 (561)
+|.|++|+|||. |+.||++|++++.. ..+++|.++|||||+|.. +..++... +.. .
T Consensus 160 ~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~-~~~~~~~~--~~~---~ 233 (329)
T 2afw_A 160 SLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAP-NPTFPNFF--PNS---A 233 (329)
T ss_dssp EEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSS-SCCBCCCC--GGG---H
T ss_pred cEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCC-CCceeeec--cCc---c
Confidence 999999999998 99999999987532 236789999999999986 33221110 111 1
Q ss_pred HHHHHHHHHH---HHhCCeeeeccccccCCC----CCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCH
Q 008568 334 QIFEGFTNVA---EELGFKVGLKHKKINISN----PRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDE 406 (561)
Q Consensus 334 ~l~~~l~~~a---~~~~i~v~~~~~kin~~~----~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~ 406 (561)
.+++.+..++ ...++.-.......-+.+ ....|||.+|.++|||++.++....++ .+||..||.+++|+
T Consensus 234 ~~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~~GiP~~~~~~~~~~~----~yHt~~Dt~~~ld~ 309 (329)
T 2afw_A 234 RWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPE----VWHTMDDNEENLDE 309 (329)
T ss_dssp HHHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHTTTCCEEEECCSSCCT----TTTSTTCSSTTCCH
T ss_pred hHHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHHCCCCEEEEEcCCCCC----CCCCCCCchhhCCH
Confidence 2333332222 222321100000000111 123589999999999999998765432 34799999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008568 407 TSFIRSVKLVAESLARHI 424 (561)
Q Consensus 407 ~~L~~~~~~vaeaLa~~i 424 (561)
+.|.+.+++++..++.+|
T Consensus 310 ~~l~~~~~~~~~~v~eyl 327 (329)
T 2afw_A 310 STIDNLNKILQVFVLEYL 327 (329)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999888888775
No 8
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.94 E-value=8.9e-26 Score=243.90 Aligned_cols=237 Identities=15% Similarity=0.102 Sum_probs=167.7
Q ss_pred CCCCcEEEeechhhHHHHHHHHhhccCCCCCCceeecceEEEEecCCCcccCCCCcceEEEEecCCCCCCCCCCCCEEEE
Q 008568 145 KLPYPVYFAFENDEIDAVLDDVKKNDATGQPATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAI 224 (561)
Q Consensus 145 ~~~~Pvyf~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~~~~~~NV~g~L~G~~~~~~~~~~~~IvI 224 (561)
...+|+..+.. ++.+.|++.++.. .+.+ ..+.+. .....+....||+|+++|.+. ..++|++
T Consensus 193 ~~~IP~~~Is~-~da~~L~~~l~~g----~~~~-----v~l~~~---~~~~~~~~~~Nvi~~~~g~~~-----~~~~i~~ 254 (444)
T 3iib_A 193 VTAIPAAAISN-PDADLINAMLKRD----KEVV-----ISLELG---SERRGETTSYNVIAEVKGSTK-----ADEIVLI 254 (444)
T ss_dssp SCCCCEEEECH-HHHHHHHHHHTTT----CCCE-----EEEEEE---EEEEEEEEEEEEEEEECCSTE-----EEEEEEE
T ss_pred CCCCCeEEecH-HHHHHHHHHHhCC----CCeE-----EEEEEe---eeEcCCceeEEEEEEEeCCCC-----CCCEEEE
Confidence 36799998875 6778887777543 1111 112211 111123468999999999652 2579999
Q ss_pred EeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCee
Q 008568 225 VASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESID 304 (561)
Q Consensus 225 ~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~ 304 (561)
+|||||++. ++||+||+||++++||+||.|++.. .+|+++|.|++|++||.|+.||++|++++.. .++++.
T Consensus 255 ~aH~Ds~~~----g~Ga~D~~sG~a~~le~a~~l~~~~----~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~-~~~~~~ 325 (444)
T 3iib_A 255 GAHLDSWDE----GTGAIDDGAGVAIVTAAAKHILDLP----QKPERTIRVVLYAAEELGLLGGKTYAKEHEA-ELEKHY 325 (444)
T ss_dssp EEECCCCSS----SCCTTTTHHHHHHHHHHHHHHHTSS----SCCSEEEEEEEESCGGGTSHHHHHHHHHTGG-GGGGEE
T ss_pred EeecccCCC----CCCCccchHHHHHHHHHHHHHHhcC----CCCCCeEEEEEECCcccCCcCHHHHHHhhHh-hhhcee
Confidence 999999986 6999999999999999999998763 4689999999999999999999999998743 467899
Q ss_pred EEEEeccccCCCCceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEecc
Q 008568 305 YAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSEL 384 (561)
Q Consensus 305 ~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~ 384 (561)
++||+||.|.. ...+....++ ....+++.+.+..+..++... .......+||.+|.+.|||++.++..
T Consensus 326 ~~~n~D~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~SD~~~f~~~GiP~~~l~~~ 393 (444)
T 3iib_A 326 IAAESDFGAGP--IYQIDWRVAD---TAHSPVINAMKVAEPLGVAAG-------NNKASGGPDVSMLPALGVPVASLRQD 393 (444)
T ss_dssp EEEECCSTTCC--EEEEEEECCH---HHHHHHHHHGGGGGGGTCEEC-------CSCCCCCGGGTTSGGGTCCEEEEEEC
T ss_pred EEEECcCCCCc--ceEEEeecCh---hhHHHHHHHHHHHhhcCCccc-------cCCCCCCCccHHHHHCCCCEEEeecC
Confidence 99999998753 2222222222 234555555443333444321 01123368999999999999999875
Q ss_pred CCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 008568 385 SAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAR 422 (561)
Q Consensus 385 ~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~ 422 (561)
... ++..+||..||.++||++.|.++++.++..+..
T Consensus 394 ~~~--~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~ 429 (444)
T 3iib_A 394 GSD--YFDYHHTPNDTLDKINPEALAQNVAVYAQFAWV 429 (444)
T ss_dssp CTT--GGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCc--CCCCCCCCccccccCCHHHHHHHHHHHHHHHHH
Confidence 432 233458999999999999998877755544443
No 9
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.93 E-value=1e-23 Score=226.04 Aligned_cols=289 Identities=17% Similarity=0.135 Sum_probs=189.8
Q ss_pred cccceEEEEeccCCCHH-HHHHHHhhcCCcceEEEEcCCccccCCCCCCCCcchhhHHHhHHHHHHHHhhccCCCCcEEE
Q 008568 74 DLSRTVVMIPVRELNIS-FVTEYVSRKHPLGGMLFLLPEIFRLENGGGGKDVREKEVVKNVLLELEKLLVHAKLPYPVYF 152 (561)
Q Consensus 74 ~~~R~~vl~~~~d~~~~-~~~~~~~~~~~~~gvliilP~~~~~~s~~~~n~~~~~~~~~~~~~~le~~Ll~~~~~~Pvyf 152 (561)
++.-+.||++..+..+. .+... .+..+.|+||+...+.. +.. .+ + ......+|+..
T Consensus 112 dv~GkIvlv~~g~~~~~~k~~~A--~~~GA~gvIi~~~~~~~-~~g--------------~~---~---~~~~~~IP~~~ 168 (421)
T 2ek8_A 112 DLNGKIALIQRGNISFADKVRNA--AKQGAKAVIIYNNTDGK-LNG--------------TL---G---GSDASFVAAVG 168 (421)
T ss_dssp CCTTSEEEEECCSSCHHHHHHHH--HHTTCSEEEEECSSSSC-CCC--------------BC---S---SCCTTCCEEEE
T ss_pred CcCceEEEEeCCCCCHHHHHHHH--HHCCCeEEEEEeCCCcc-ccc--------------cc---C---CCCCCCccEEE
Confidence 56678899887776532 33332 23457788887543211 000 00 0 01346789988
Q ss_pred eechhhHHHHHHHHhhccCCCCCCceeecceEEEEecCCCcccCCCCcceEEEEecCCCCCCCCCCCCEEEEEeccCCCC
Q 008568 153 AFENDEIDAVLDDVKKNDATGQPATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAIVASYDTFG 232 (561)
Q Consensus 153 ~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~~~~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g 232 (561)
+.. +..+.|++.+.... .+ ...+.+... . .......||+|+++|.++. ....++|+++|||||++
T Consensus 169 Is~-~~a~~L~~~l~~~~-~g--------~~~v~l~~~-~--~~~~~~~Nvi~~~~g~~~~--~~~~~~v~~~aH~D~v~ 233 (421)
T 2ek8_A 169 ITK-QEGDALAANLRAGE-KI--------TATVKVAGA-E--VKTLTSHNVIATKKPDANK--KNTNDIIIIGSHHDSVE 233 (421)
T ss_dssp ECH-HHHHHHHHHHHTTC-CC--------EEEEEEESC-E--EEEEEEEEEEEEECCCSST--TCCCCEEEEEEECCCCT
T ss_pred eCH-HHHHHHHHHhhhhc-cC--------Ccccccccc-c--cccccccceEEEecCcccC--CCCCCEEEEecccccCC
Confidence 775 46777877764211 00 111222111 1 2333578999999996420 01367999999999998
Q ss_pred CCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 233 AAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 233 ~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
. ++||.||+||++++||+||.|++. +++++|.|++|++||.|+.||++|++++.+..++++.++||+||+
T Consensus 234 ~----g~Ga~D~~~G~a~~le~~~~l~~~------~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 234 K----APGANDDASGVAVTLELARVMSKL------KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp T----CCCTTTTHHHHHHHHHHHHHHTTS------CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred C----CCCCCCCcHhHHHHHHHHHHHhcc------CCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEeccc
Confidence 7 689999999999999999999873 357999999999999999999999998765567889999999999
Q ss_pred cCCCC-ceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCcc
Q 008568 313 GSWNN-ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELL 391 (561)
Q Consensus 313 G~~~~-~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~ 391 (561)
|..+. .++++....+.. ... ......++..++. .. .. ....+||.+|.+.|||++.++..+.++
T Consensus 304 g~~~~~~~~~~~~~g~~~-~~~---~~~~~~~~~~~~~-~~----~~---~~~~SD~~~F~~~GIP~~~~~~~~~~~--- 368 (421)
T 2ek8_A 304 GSKDAGDLIMYTIDGKKN-RVT---DLGAAASSRLSGV-LP----YG---QEGRSDHESFHALGIPAALFIHAPVEP--- 368 (421)
T ss_dssp CBTTSCEEEEEETTSCCC-HHH---HHHHHHHHHHTSC-CC----EE---ECCSSTHHHHHTTTCCEEEEEEESCCT---
T ss_pred CCCCCcceEEecCCCccc-cch---hhHHHHHHhcCCC-CC----CC---CCCCCccHHHHHCCCCEEEEECCcCCC---
Confidence 98632 344443322111 111 1122334455543 11 01 123689999999999999887443221
Q ss_pred ccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHhhccCC
Q 008568 392 ESTGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGK 430 (561)
Q Consensus 392 ~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~~iy~~~~~ 430 (561)
.+||..||.+++|.+.+...+++++.. +|.+++.
T Consensus 369 -~yHt~~Dt~~~i~~~~l~~~~~~~~~~----~~~la~~ 402 (421)
T 2ek8_A 369 -WYHTPNDTLDKISKEKLDNVADIVGSA----VYQAARP 402 (421)
T ss_dssp -TTTSTTCCGGGBCHHHHHHHHHHHHHH----HHHHHSS
T ss_pred -CCCCcccchhhCCHHHHHHHHHHHHHH----HHHHhCC
Confidence 347999999999999998766666554 4545443
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.92 E-value=3.6e-24 Score=218.00 Aligned_cols=197 Identities=17% Similarity=0.157 Sum_probs=148.7
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTS 279 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~ 279 (561)
..||+|+++|.++ .++|+++||||+++. ++||.||++|++++||++|.|++.. .+++++|.|++++
T Consensus 64 ~~nvi~~~~g~~~------~~~i~l~aH~D~v~~----g~Ga~D~~~g~a~~l~~~~~l~~~~----~~~~~~i~~~~~~ 129 (284)
T 1tkj_A 64 GYNLIANWPGGDP------NKVLMAGAHLDSVSS----GAGINDNGSGSAAVLETALAVSRAG----YQPDKHLRFAWWG 129 (284)
T ss_dssp EEEEEEECSCSEE------EEEEEEEEECCCCTT----SCCTTTTHHHHHHHHHHHHHHHHTT----CCCSEEEEEEEES
T ss_pred ceeEEEEEeCCCC------CCEEEEEeecCCCCC----CCCCccChHHHHHHHHHHHHHHhcC----CCCCceEEEEEEC
Confidence 5799999988432 479999999999987 6899999999999999999998743 3578999999999
Q ss_pred CCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccC
Q 008568 280 GGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINI 359 (561)
Q Consensus 280 gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~ 359 (561)
+||.|+.||++|++++.+..++++.++||+||+|..+..+++. .. ++ .+.+.+...+++.++..... .
T Consensus 130 ~EE~g~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~---~~---~l~~~~~~~~~~~gi~~~~~----~- 197 (284)
T 1tkj_A 130 AEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DD---DP---VIEKTFKNYFAGLNVPTEIE----T- 197 (284)
T ss_dssp CGGGTSHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CS---SH---HHHHHHHHHHHHHTCCCEEC----C-
T ss_pred CcccCCcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cC---CH---HHHHHHHHHHHHcCCCcccC----C-
Confidence 9999999999999987655568899999999999863233332 21 11 33444555566666654421 1
Q ss_pred CCCCCCCcccchhcCCCeEEEEeccCCC---------------CCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 008568 360 SNPRVAWEHEQFSRLRVTAATLSELSAA---------------PELLESTGGLLDSRHFVDETSFIRSVKLVAESLARH 423 (561)
Q Consensus 360 ~~~~~~sdHe~F~~~gIPAvtls~~~~~---------------~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~~ 423 (561)
.....+||.+|.+.|||++.++..... ..+.+.+||..||.+++|.+.+.+.++++++.+.++
T Consensus 198 -~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~l 275 (284)
T 1tkj_A 198 -EGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTL 275 (284)
T ss_dssp -SSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHH
Confidence 112368999999999999999875210 111234589999999999999998877776665553
No 11
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.90 E-value=4.5e-23 Score=211.23 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=144.0
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC----CCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEE
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP----ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNIL 274 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~----~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIl 274 (561)
...||+|+++|.+. ..++|+++|||||++..+ .+++||.||++|++++||++|.|++.. .+++++|.
T Consensus 74 ~~~nvi~~~~g~~~-----~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~----~~~~~~i~ 144 (299)
T 1rtq_A 74 NQKSVVMTITGSEA-----PDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENN----FQPKRSIA 144 (299)
T ss_dssp EEEEEEEEECCSSE-----EEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTT----CCCSEEEE
T ss_pred CCceEEEEEECCCC-----CCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcC----CCCCceEE
Confidence 35799999998542 247999999999986321 247999999999999999999998742 35789999
Q ss_pred EEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC--CceeEEeccCCchhHHHHHHHHHHHHHHHh--CCee
Q 008568 275 FGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--NELWIHVSKPPENAYIKQIFEGFTNVAEEL--GFKV 350 (561)
Q Consensus 275 F~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~--~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~--~i~v 350 (561)
|+++++||.|+.||++|++++.+ ..+++.++||+||+|..+ ..+++.... .++ .+.+.+.++++.+ ++..
T Consensus 145 ~~~~~~EE~g~~Gs~~~~~~~~~-~~~~~~~~i~~D~~g~~g~~~~i~~~~~~--~~~---~l~~~l~~~a~~~~~~i~~ 218 (299)
T 1rtq_A 145 FMAYAAEEVGLRGSQDLANQYKS-EGKNVVSALQLDMTNYKGSAQDVVFITDY--TDS---NFTQYLTQLMDEYLPSLTY 218 (299)
T ss_dssp EEEESCGGGTSHHHHHHHHHHHH-TTCEEEEEEECSCCSCCCSSSSEEEECTT--SCH---HHHHHHHHHHHHHCTTCCE
T ss_pred EEEECCccCCchhHHHHHHhhhh-ccccEEEEEEecCCCCCCCCcceEEEeCC--CCc---hHHHHHHHHHHHhCccCCc
Confidence 99999999999999999998643 357899999999998642 335544321 122 2334444555555 3433
Q ss_pred eeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCH--HHHHHHHHHHHHHHHHHHhhcc
Q 008568 351 GLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDE--TSFIRSVKLVAESLARHIYGYQ 428 (561)
Q Consensus 351 ~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~--~~L~~~~~~vaeaLa~~iy~~~ 428 (561)
... . .....+||.+|.++|||++.++.... .++.+.+||..||.+++|. ..+.+.++++ +.++++++
T Consensus 219 ~~~-----~-~~~~~sD~~~f~~~GiP~~~~~~~~~-~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~----~~~~~~La 287 (299)
T 1rtq_A 219 GFD-----T-CGYACSDHASWHNAGYPAAMPFESKF-NDYNPRIHTTQDTLANSDPTGSHAKKFTQLG----LAYAIEMG 287 (299)
T ss_dssp EEE-----C-CSSCCSTHHHHHHTTCCEECEESSCG-GGSCTTTTSTTCCGGGSCTTCHHHHHHHHHH----HHHHHHHH
T ss_pred ccC-----C-CCCCCCcHHHHHHCCCCEEEeccccc-ccCCCCCCCccccccccCccHHHHHHHHHHH----HHHHHHHh
Confidence 321 0 11246899999999999998765321 1233345899999999998 4555555544 44455444
No 12
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.88 E-value=1.4e-22 Score=227.20 Aligned_cols=262 Identities=15% Similarity=0.198 Sum_probs=167.3
Q ss_pred CCCcEEEeechhhHHHHHHHHhhccC---CCCCC-ce-eecceEEEEecCCCcccCCCCcceEEEEecCCCCCCCCCCCC
Q 008568 146 LPYPVYFAFENDEIDAVLDDVKKNDA---TGQPA-TA-TTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLP 220 (561)
Q Consensus 146 ~~~Pvyf~~~~~~~~~i~~~~~~~~~---~~~~~-s~-~~~~~~~~~s~~~~~~~~~~~~~NV~g~L~G~~~~~~~~~~~ 220 (561)
..+|+.-+.. ++.+.|++.+..... .+... +. ...+-++.+... .......+.||+|+++|... ..+
T Consensus 210 p~IP~~~Is~-~~a~~Ll~~l~g~~~~~~~~~~~~~~~~g~~~~v~l~v~--~~~~~~~~~NVi~~i~G~~~-----~~~ 281 (640)
T 3kas_A 210 PNIPVQTISR-AAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTVS--NVLKEIKILNIFGVIKGFVE-----PDH 281 (640)
T ss_dssp CSSCEEECCH-HHHHHHHTTEEEECCGGGCCCTTCEEEECTTEEEEEEEC--CEEEEEEEEEEEEEECCSSE-----EEE
T ss_pred CCCCEEecCH-HHHHHHHHHccCCchhhhhcccCcccccCCCceEEEEEE--EEEEeeeEEEEEEEEeCCcC-----CCC
Confidence 4689988775 688888876643110 01110 00 001112222111 11234468999999999742 257
Q ss_pred EEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhh
Q 008568 221 TIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLR 300 (561)
Q Consensus 221 ~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l 300 (561)
+||++|||||+ .+||+|||||++++||+||.|+++....+.+|+++|+|++|+|||.|++||++|++++.....
T Consensus 282 ~vvvgaH~Ds~------~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~l~ 355 (640)
T 3kas_A 282 YVVVGAQRDAW------GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLH 355 (640)
T ss_dssp EEEEEEECCCS------SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTTGG
T ss_pred ceeeecccCCC------CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchhHHHHHHhhhhhhh
Confidence 99999999998 489999999999999999999986211235789999999999999999999999998644345
Q ss_pred cCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHHHHHHHHHHhCCeee--ecccccc----CCCCCCCCcccchhc-
Q 008568 301 ESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVG--LKHKKIN----ISNPRVAWEHEQFSR- 373 (561)
Q Consensus 301 ~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~--~~~~kin----~~~~~~~sdHe~F~~- 373 (561)
+++.++||+||.|.++..+.+. ..|. ...++ ..+++.....+. .....-+ ...-...+||.+|..
T Consensus 356 ~~~~a~iNlD~~~~G~~~l~~~--~~p~---l~~l~---~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD~~~F~~~ 427 (640)
T 3kas_A 356 LKAFTYINLDKAVLGTSNFKVS--ASPL---LYTLI---EKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAY 427 (640)
T ss_dssp GTEEEEEECTTCBSCSSEEEEE--ECGG---GHHHH---HHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTSTHHHHHHH
T ss_pred hCEEEEEecccCccCCCceEEE--eCHH---HHHHH---HHHHHhCCCCCCCCceecccccccccCCCCCCcchHHHHHh
Confidence 8899999999998753345443 2331 23343 333332211110 0000000 001112479999977
Q ss_pred CCCeEEEEeccCCCCCccccCCCCCCCcCCCCH--HHHHHHHHHHHHHHHHHHhhccCCc
Q 008568 374 LRVTAATLSELSAAPELLESTGGLLDSRHFVDE--TSFIRSVKLVAESLARHIYGYQGKN 431 (561)
Q Consensus 374 ~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~--~~L~~~~~~vaeaLa~~iy~~~~~~ 431 (561)
.|||++.+..... +.| ..+||.+||.+.++. +..-+..+.+|+.++.+++.+++..
T Consensus 428 ~GIP~~~~~~~~~-~~y-~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~ 485 (640)
T 3kas_A 428 SGIPAVSFCFCED-TDY-PYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDV 485 (640)
T ss_dssp HCCCEEEEEEECS-SCC-TTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCeeeccccCC-CCC-CCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999998875432 223 234899999986653 2234556677788888888787543
No 13
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.86 E-value=1.9e-20 Score=197.84 Aligned_cols=185 Identities=16% Similarity=0.125 Sum_probs=132.7
Q ss_pred cceEEEEe--cCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEE
Q 008568 200 ITNIQGWL--QGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGL 277 (561)
Q Consensus 200 ~~NV~g~L--~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~ 277 (561)
+...+|.+ +|.. .+.|+|+|||||-+ +||||+||+|+++||||.|+.. ++++++.|+|
T Consensus 165 G~l~y~e~~ipG~t-------~~~IllsaH~cHP~-------~ANDNaSG~a~lleLar~l~~~------~~~~t~rFvf 224 (435)
T 3k9t_A 165 GSLTYGEYYIRGEL-------EEEILLTTYTCHPS-------MCNDNLSGVALITFIAKALSKL------KTKYSYRFLF 224 (435)
T ss_dssp CEEEEEEEEECCSS-------SCEEEEEEECCCCS-------CTTTTHHHHHHHHHHHHHHTTS------CCSSEEEEEE
T ss_pred CceEEEEEEecCCC-------CCEEEEEEEcCCCC-------CCCccchHHHHHHHHHHHHhcC------CCCceEEEEE
Confidence 45555544 7733 57999999999843 5999999999999999999763 4689999999
Q ss_pred eCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCc-hhHHHHHHHHHHHHHHHhCCeeeecccc
Q 008568 278 TSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPE-NAYIKQIFEGFTNVAEELGFKVGLKHKK 356 (561)
Q Consensus 278 ~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~-~~~~~~l~~~l~~~a~~~~i~v~~~~~k 356 (561)
++ |++||..|+..+.. .+++|.++|||||+|..++..| . .++. ++... +.+..++++.+......
T Consensus 225 ~p----g~iGS~~yl~~~~~-~l~~i~a~lnLDmVGd~~~~~y--~-~sr~g~~~~d---~~~~~vl~~~~~~~~~~--- 290 (435)
T 3k9t_A 225 AP----ETIGSITWLSRNED-KLKNIKMGLVATCVGDAGIKNY--K-RTKFGDAEID---KIVEKVLMHCGSEYYVA--- 290 (435)
T ss_dssp EC----TTHHHHHHHHHCGG-GGGGEEEEEECCSCCSSSCEEE--E-CCTTSSSHHH---HHHHHHHHHSSSCEEEE---
T ss_pred cC----ccHHHHHHHHhChH-hhhceEEEEEEEEecCCCCcee--e-cCCCCChHHH---HHHHHHHhhcCCCCcee---
Confidence 98 79999999987543 4679999999999998633222 2 2222 22222 22223334433333221
Q ss_pred ccCCCCCCCCcccchhcCC--CeEEEEeccCC-CCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHh
Q 008568 357 INISNPRVAWEHEQFSRLR--VTAATLSELSA-APELLESTGGLLDSRHFVDETSFIRSVKLVAESLARHIY 425 (561)
Q Consensus 357 in~~~~~~~sdHe~F~~~g--IPAvtls~~~~-~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~~iy 425 (561)
.+.+ ..+||.+|...| ||++++...+. +++ +||..||+++|+.+.|...+.++.+++..+=.
T Consensus 291 -~f~~--~GSDh~qF~spG~dIPv~~~~r~~~~~pe----YHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~ 355 (435)
T 3k9t_A 291 -DFFP--WGSDERQFSSPGINLSVGSLMRSCYGFDG----YHTSADNLCYMNKDGLADSYKTYLEVIYTIEN 355 (435)
T ss_dssp -CCCS--CSSTHHHHTSTTTCCCEEEEESSCTTCTT----TTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCC--CCCcchhHhhCCCCCCEEEEecCCCCCcc----cCCCcCChhhCCHHHHHHHHHHHHHHHHHhhc
Confidence 1112 358999999999 99999987433 233 47889999999999999998888888766543
No 14
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.82 E-value=4e-20 Score=209.35 Aligned_cols=260 Identities=18% Similarity=0.184 Sum_probs=160.5
Q ss_pred CCCcEEEeechhhHHHHHHHHhhccC----C-CC--------CC-ceeecceEEEEecCCCcccCCCCcceEEEEecCCC
Q 008568 146 LPYPVYFAFENDEIDAVLDDVKKNDA----T-GQ--------PA-TATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLK 211 (561)
Q Consensus 146 ~~~Pvyf~~~~~~~~~i~~~~~~~~~----~-~~--------~~-s~~~~~~~~~~s~~~~~~~~~~~~~NV~g~L~G~~ 211 (561)
..||+.-+.. ++.+.|++.+..... . +. |. +.....-++.+... .. .....+.||+|+++|..
T Consensus 247 p~IP~~pIS~-~da~~Ll~~l~g~~~p~~~W~g~~~~~y~~gp~~~g~~~~~~v~l~v~-~~-~~~~~~~NVi~~i~G~~ 323 (707)
T 3fed_A 247 PRIPVHPIGY-NDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGSDSFRKVRMHVY-NI-NKITRIYNVVGTIRGSV 323 (707)
T ss_dssp CSSCEEEECH-HHHHHHHHTBCBSCCSSGGGCCSSSSCCCCBSSBCCC-CCCEEEEEBC-CE-EEEEEEEEEEEEECCSS
T ss_pred CCCCeEecCH-HHHHHHHHHhcCCCCcccccccCcCcceecccccCCCCCceeEEEEEE-EE-EEEEEEEEEEEEEeCCC
Confidence 5799999987 588889887754210 0 10 10 00000012222111 11 23345899999999975
Q ss_pred CCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHH
Q 008568 212 ADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKW 291 (561)
Q Consensus 212 ~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~ 291 (561)
. ..++|||+|||||++ +||+||+||+|++||+||.|+++.. .+.+|+++|+|++|+|||.|++||++|
T Consensus 324 ~-----~~~~vllgaH~Ds~~------~Ga~D~~sG~a~lLe~ar~l~~~~~-~g~~p~r~I~f~~~~~EE~Gl~GS~~~ 391 (707)
T 3fed_A 324 E-----PDRYVILGGHRDSWV------FGAIDPTSGVAVLQEIARSFGKLMS-KGWRPRRTIIFASWDAEEFGLLGSTEW 391 (707)
T ss_dssp E-----EEEEEEEEEECCCSS------SCTTTTHHHHHHHHHHHHHHHHHHH-TTCCCSEEEEEEEESCGGGTSHHHHHH
T ss_pred C-----CCceEEEeccccCCC------CCCccCcHHHHHHHHHHHHHHhhhh-ccCCCCCCEEEEEeCCccccchhHHHH
Confidence 2 257999999999984 6899999999999999999998642 134789999999999999999999999
Q ss_pred HHhcchhhhcCeeEEEEeccccCCCCceeEEeccCCchhHHHHHHHHHHHHHHHhC--------Ceeee---------cc
Q 008568 292 LRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELG--------FKVGL---------KH 354 (561)
Q Consensus 292 v~~~~~~~l~~I~~vlnLD~iG~~~~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~--------i~v~~---------~~ 354 (561)
++++.....+++.++||+||.|.++..+.+.. .|. ..+++ ..+++... .++-- ..
T Consensus 392 ~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~--sp~---l~~~i---~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 392 AEENVKILQERSIAYINSDSSIEGNYTLRVDC--TPL---LYQLV---YKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp HHHHHHHHHHHEEEEEECSCSBSCSSEEEEEE--CGG---GHHHH---HHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred HHhcchhhhhCEEEEEEecccccCCceEEEec--CHH---HHHHH---HHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 99875545688999999999998622444433 231 12222 22222110 00000 00
Q ss_pred ccc-cCCCCCCCCcccchhc-CCCeEEEEeccCCC-----CCccccCCCCCCCcCCCCH---HHHHHHHHHHHHHHHHHH
Q 008568 355 KKI-NISNPRVAWEHEQFSR-LRVTAATLSELSAA-----PELLESTGGLLDSRHFVDE---TSFIRSVKLVAESLARHI 424 (561)
Q Consensus 355 ~ki-n~~~~~~~sdHe~F~~-~gIPAvtls~~~~~-----~d~~~~r~si~Dt~d~id~---~~L~~~~~~vaeaLa~~i 424 (561)
..+ .+..-...+||.+|.. .|||++.+...... ..| ..+||.+||.+.++. ..+. .-+.+|+.++.++
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y-~~YHT~~Dt~~~~~~~~Dp~f~-~h~~~a~~~g~l~ 541 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSY-PVYHTIYETFELVEKFYDPTFK-KQLSVAQLRGALV 541 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSC-TTTTSTTCCHHHHHHHTCTTCH-HHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCC-CCcCCCcccHHHHHHhcCchHH-HHHHHHHHHHHHH
Confidence 000 0001122589999998 79999988764221 122 245899999764322 1111 2234556666666
Q ss_pred hhccCC
Q 008568 425 YGYQGK 430 (561)
Q Consensus 425 y~~~~~ 430 (561)
+.+++.
T Consensus 542 l~La~~ 547 (707)
T 3fed_A 542 YELVDS 547 (707)
T ss_dssp HHHHHC
T ss_pred HHHhCC
Confidence 666643
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.37 E-value=2.4e-11 Score=122.21 Aligned_cols=193 Identities=13% Similarity=0.120 Sum_probs=131.1
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||++++ |. ..|+|++.||||+++..+ | .++|+.||.+|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~-------~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~ 122 (269)
T 4h2k_A 51 TLNLWAKH-GT-------SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 122 (269)
T ss_dssp BCEEEEEE-CS-------SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEe-CC-------CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhC
Confidence 57999988 52 257999999999998632 1 24799999999999999999997653
Q ss_pred CCCCCCCceeEEEEEeCCCCCCCc-chHHHHHhcchhhhcCeeEEEEeccccCC--CCceeEEeccCCc--hhHHHHHHH
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNYN-GTHKWLRSFDQRLRESIDYAICLNSVGSW--NNELWIHVSKPPE--NAYIKQIFE 337 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~~-GS~~~v~~~~~~~l~~I~~vlnLD~iG~~--~~~l~lhvs~~p~--~~~~~~l~~ 337 (561)
..++.+|.|+++.+||.|.. |++.+++.+... ..+.+++|+.|.-+.. ++.+ .....-. .+.-..+.+
T Consensus 123 ----~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~Ept~~~~~~~~i--~~g~~G~G~~~~~~~l~~ 195 (269)
T 4h2k_A 123 ----PNHKGTIALLITSDEEATAKDGTIHVVETLMAR-DEKITYCMVGEPSSAKNLGDVV--KNGRRGGGFLTKPGKLLD 195 (269)
T ss_dssp ----TTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT-TCCCCEEEECCCCBSSSTTSEE--ECSCTTCC------HHHH
T ss_pred ----CCCCccEEEEEEeccccCcccCHHHHHHHHHhc-CCCCCEEEEECCCCCCcCCcee--EEecccccccCCCcHHHH
Confidence 24678999999999999985 999999864321 2467889998866432 1111 1111000 000124667
Q ss_pred HHHHHHHH-hCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 338 GFTNVAEE-LGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 338 ~l~~~a~~-~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
.+.++++. .+++...... .-.+|+..|+..++|++.++... .+ .|++. +.++.+.+.+.++++
T Consensus 196 ~l~~aa~~~~gi~~~~~~~-------gggtDa~~~~~~g~p~~~~~~~~---~~---~Hs~~---E~v~~~d~~~~~~ll 259 (269)
T 4h2k_A 196 SITSAIEETIGITPKAETG-------GGTSDGRFIALMGAEVVEFGPLN---ST---IHKVN---ECVSVEDLGKCGEIY 259 (269)
T ss_dssp HHHHHHHHHHSCCCEEECC---------CHHHHHHHTTTCEEEECCSBC---TT---TTSTT---CEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEecC-------CCCchHHHHHhhCCCEEEEEeCC---CC---CcCCc---ccccHHHHHHHHHHH
Confidence 77776665 5765543211 12468888998999999997642 12 25666 578888898888877
Q ss_pred HHHHHHH
Q 008568 417 AESLARH 423 (561)
Q Consensus 417 aeaLa~~ 423 (561)
.+.+.++
T Consensus 260 ~~~l~~l 266 (269)
T 4h2k_A 260 HKMLVNL 266 (269)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766554
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.35 E-value=1.3e-11 Score=123.99 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=131.8
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||++++ |.+ .|+|++.||||+++..+ | .++||.|+.+|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~~-------~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~ 122 (268)
T 3t68_A 51 TTNFWARR-GTQ-------SPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 122 (268)
T ss_dssp EEC-CEEE-CSS-------SCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred ccEEEEEe-CCC-------CCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhC
Confidence 46899988 522 57999999999998642 1 35799999999999999999997653
Q ss_pred CCCCCCCceeEEEEEeCCCCCCC-cchHHHHHhcchhhhcCeeEEEEeccccCC--CCceeEEe-ccCC-chhHHHHHHH
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNY-NGTHKWLRSFDQRLRESIDYAICLNSVGSW--NNELWIHV-SKPP-ENAYIKQIFE 337 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~-~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~--~~~l~lhv-s~~p-~~~~~~~l~~ 337 (561)
.+++.+|.|+++.+||.|. .|++++++.+... ..+.+++|++|.-+.. ++.+..-. ..|. .+. ..+.+
T Consensus 123 ----~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~--~~l~~ 195 (268)
T 3t68_A 123 ----PDHQGSIGFLITSDEEGPFINGTVRVVETLMAR-NELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDT--GELLA 195 (268)
T ss_dssp ----TTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHT-TCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCC--CHHHH
T ss_pred ----CCCCCcEEEEEEeCCccCcccCHHHHHHHHHhc-CCCCCEEEEeCCCCCccCCceeEEecCCCcccCCc--hHHHH
Confidence 2467899999999999988 4999999864321 2467899999876542 12221110 1111 111 24666
Q ss_pred HHHHHHHH-hCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 338 GFTNVAEE-LGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 338 ~l~~~a~~-~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
.+.+++++ .|+...... ..-.+|+..|++.++|++.+.... .+ .|+.. +.++.+.+.+.++++
T Consensus 196 ~l~~a~~~~~gi~~~~~~-------sgggtD~~~~~~~g~p~~~~~~~~---~~---~Hs~~---E~v~~~d~~~~~~vl 259 (268)
T 3t68_A 196 AVVAAVEEVNHQAPALLT-------TGGTSDGRFIAQMGAQVVELGPVN---AT---IHKVN---ECVRIADLEKLTDMY 259 (268)
T ss_dssp HHHHHHHHHHSSCCEEES-------SCCCHHHHHHHHHTCEEEECCSBC---TT---TTSTT---CEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEec-------CccccHHHHHHhcCCCEEEEeeCC---CC---CCCcc---ccccHHHHHHHHHHH
Confidence 67777666 476554321 112468888999999999986532 12 25666 577888888888887
Q ss_pred HHHHHHH
Q 008568 417 AESLARH 423 (561)
Q Consensus 417 aeaLa~~ 423 (561)
.+.+.++
T Consensus 260 ~~~l~~l 266 (268)
T 3t68_A 260 QKTLNHL 266 (268)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 17
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.18 E-value=3.5e-10 Score=116.76 Aligned_cols=149 Identities=15% Similarity=0.152 Sum_probs=101.6
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCC---
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN--- 317 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~--- 317 (561)
|.||.+|++++|++++.|++. .++++|.|+++..||.|..|++++++.+ ..+++|++|+.+..+.
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~------~~~~~i~~~~~~~EE~G~~G~~~~~~~~------~~~~~i~~d~~~~~~~p~~ 238 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDH------ELEGKVIFAFTVQEEVGLKGAKFLANHY------YPQYAFAIDSFACCSPLTG 238 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTS------CCSSEEEEEEESCGGGTSHHHHHHTTTC------CCSEEEEECCEECCSGGGT
T ss_pred cCCcHHHHHHHHHHHHHHhhc------CCCceEEEEEECccccCcchHHHHhccc------CCCEEEEEecccccCCCCC
Confidence 789999999999999998652 2468999999999999999999886531 2468899998764310
Q ss_pred ------ceeEEe-c-cCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCC
Q 008568 318 ------ELWIHV-S-KPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPE 389 (561)
Q Consensus 318 ------~l~lhv-s-~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d 389 (561)
...+.+ . ..+.+ ..+.+.+.+++++.|+....... ...+|+..|.. |||++.+... . .
T Consensus 239 ~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~~~~~gi~~~~~~~-------~ggtDa~~~~~-GiPtv~lg~~-~-~- 304 (332)
T 2wyr_A 239 DVKLGKGPVIRAVDNSAIYS---RDLARKVWSIAEKNGIEIQIGVT-------GGGTDASAFQD-RSKTLALSVP-I-K- 304 (332)
T ss_dssp TCCTTSCCEEEEECSSCBCC---HHHHHHHHHHHHHTTCCCEEEEC-------SSCCGGGGGTT-TSEEEEEECE-E-B-
T ss_pred ceeeCCCCEEEEcCCCCCCC---HHHHHHHHHHHHHcCCCeEEecC-------CCCchHHHHHc-CCCEEEEcCC-c-C-
Confidence 111111 1 11122 35666677777777765543211 13579999998 9999998643 1 1
Q ss_pred ccccCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 008568 390 LLESTGGLLDSRHFVDETSFIRSVKLVAESLA 421 (561)
Q Consensus 390 ~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa 421 (561)
+.|+.. |.++.+.+.+.++++++.+.
T Consensus 305 ---~~Hs~~---E~v~~~dl~~~~~ll~~~~~ 330 (332)
T 2wyr_A 305 ---YLHSEV---ETLHLNDLEKLVKLIEALAF 330 (332)
T ss_dssp ---SCSSTT---CEEEHHHHHHHHHHHHHHHH
T ss_pred ---CCCChh---hcccHHHHHHHHHHHHHHHH
Confidence 235554 67888888888877766554
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.14 E-value=7.4e-10 Score=116.45 Aligned_cols=153 Identities=14% Similarity=0.059 Sum_probs=101.1
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC--C-
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--N- 317 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~--~- 317 (561)
|.||.+|++++|++++.|.+. .++++|.|+++..||.|..|++.+...+ ..+++|++|+.+..+ +
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~------~~~~~v~~~~~~~EE~G~~G~~~~~~~~------~~d~~i~~d~~~~~~~~g~ 249 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNT------DHPNIVYGVGTVQEEVGLRGAKTAAHTI------QPDIAFGVDVGIAGDTPGI 249 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTS------CCSSEEEEEEESCCTTTSHHHHHHHHHH------CCSEEEEEEEEECCCSTTC
T ss_pred cCccHHHHHHHHHHHHHHhhc------CCCceEEEEEECCcccChhhHHHHhccc------CCCEEEEEeccccCCCCCC
Confidence 899999999999999999753 2468999999999999999999885431 235788888765321 0
Q ss_pred -----------ceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeee-ccccccCCCCCCCCcccch--hcCCCeEEEEec
Q 008568 318 -----------ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGL-KHKKINISNPRVAWEHEQF--SRLRVTAATLSE 383 (561)
Q Consensus 318 -----------~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~-~~~kin~~~~~~~sdHe~F--~~~gIPAvtls~ 383 (561)
...+.+..++. ..-..+.+.+.+++++.|+.... .. ....+|+..| +..|||++.+..
T Consensus 250 ~~~~~~~~lg~G~~i~~~~~~~-~~~~~l~~~l~~~a~~~gi~~~~~~~-------~~ggtDa~~~~~~~~GiPtv~lg~ 321 (373)
T 1vhe_A 250 SEKEAQSKMGKGPQIIVYDASM-VSHKGLRDAVVATAEEAGIPYQFDAI-------AGGGTDSGAIHLTANGVPALSITI 321 (373)
T ss_dssp CTTTCCCCTTSCCEEEEEETTE-ECCHHHHHHHHHHHHHHTCCCEEEEE-------TTCCCTHHHHTTSTTCCCEEEEEE
T ss_pred cccccccccCCCceEEEeCCCC-CCCHHHHHHHHHHHHHcCCCeEEecC-------CCCCccHHHHHHhCCCCcEEEEcc
Confidence 00011101110 01135666677777777766543 11 1235789999 668999999865
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 008568 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAR 422 (561)
Q Consensus 384 ~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~ 422 (561)
. . . ..|+.. +.++.+.+.+.++++++.+.+
T Consensus 322 ~-~-~----~~Hs~~---E~v~~~dl~~~~~ll~~~l~~ 351 (373)
T 1vhe_A 322 A-T-R----YIHTHA---AMLHRDDYENAVKLITEVIKK 351 (373)
T ss_dssp E-E-B----STTSSC---EEEEHHHHHHHHHHHHHHHHH
T ss_pred c-c-c----cCCChh---heecHHHHHHHHHHHHHHHHH
Confidence 3 1 1 225654 678888888877766655544
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.10 E-value=1.2e-09 Score=113.80 Aligned_cols=150 Identities=16% Similarity=0.120 Sum_probs=101.7
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCCcee
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELW 320 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~~l~ 320 (561)
|.||.+|++++|++++.|++ ++++|.|+++..||.|..|++.++... +..++|++|+.+..+..-+
T Consensus 180 a~D~k~g~a~~l~a~~~l~~--------~~~~i~~~~~~~EE~g~~G~~~~~~~~------~~~~~i~~d~~~~~~~p~~ 245 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD--------AKADVYFVATVQEEVGLRGARTSAFGI------EPDYGFAIDVTIAADIPGT 245 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS--------CSSEEEEEEESCCTTTSHHHHHHHHHH------CCSEEEEEEEEECCCSTTC
T ss_pred cCccHHHHHHHHHHHHHhhc--------CCCeEEEEEECCcccchhHHHHHhhcc------CCCEEEEEecccccCCCCC
Confidence 79999999999999999854 467999999999999999999886531 2467899988764310000
Q ss_pred --------------EEe--ccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccch--hcCCCeEEEEe
Q 008568 321 --------------IHV--SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLS 382 (561)
Q Consensus 321 --------------lhv--s~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F--~~~gIPAvtls 382 (561)
+.+ ...+.+ ..+.+.+.+++++.|++..... . ....+|+..| +..|||++.+.
T Consensus 246 ~~~~g~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~a~~~gi~~~~~~---~---~~ggsDa~~~~~~~~GiPtv~lg 316 (353)
T 1y0y_A 246 PEHKQVTHLGKGTAIKIMDRSVICH---PTIVRWLEELAKKHEIPYQLEI---L---LGGGTDAGAIHLTKAGVPTGALS 316 (353)
T ss_dssp CGGGCCCCTTSCEEEEEEETTEECC---HHHHHHHHHHHHHTTCCEEEEE---C---SSCCCTHHHHTTSTTCCCEEEEE
T ss_pred ccccCccccCCCcEEEEeCCCCCCC---HHHHHHHHHHHHHcCCCEEEee---c---CCCCchHHHHHHhCCCCcEEEEc
Confidence 111 011112 3566777777777777665310 0 1235799999 66899999986
Q ss_pred ccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 008568 383 ELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAR 422 (561)
Q Consensus 383 ~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~ 422 (561)
-. . . ..|+.. |.++.+.+.+.++++++.+.+
T Consensus 317 ~~-~-~----~~Hs~~---E~v~~~dl~~~~~ll~~~l~~ 347 (353)
T 1y0y_A 317 VP-A-R----YIHSNT---EVVDERDVDATVELMTKALEN 347 (353)
T ss_dssp EE-E-B----SCSSSC---EEEEHHHHHHHHHHHHHHHHH
T ss_pred cc-c-c----ccCCHH---HhcCHHHHHHHHHHHHHHHHh
Confidence 43 1 1 235654 678888888877777666554
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.07 E-value=8.1e-10 Score=115.04 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=94.1
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCC---
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN--- 317 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~--- 317 (561)
+.||.+|++++|++++.|.+.. .+++++|.|+|+..||.|..|++.+ . .+..++|++|+.+..+.
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~G~~g~~~~--~------~~~~~~i~~D~~~~~~~p~~ 251 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQDEN----VTLPYTTHFLISNNEEIGYGGNSNI--P------EETVEYLAVDMGALGDGQAS 251 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHT----CCCSEEEEEEEESCC----CCCCCC--C------TTEEEEEEECCCCCSCC--C
T ss_pred eccchHHHHHHHHHHHHHHhcc----CCCCceEEEEEECcccCCchhhccc--c------cCCCEEEEEecccccCCCCC
Confidence 6899999999999999997643 3467999999999999999999965 1 24678999999775421
Q ss_pred ---ceeEEe--ccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccch--hcCCCeEEEEeccCCCCCc
Q 008568 318 ---ELWIHV--SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSELSAAPEL 390 (561)
Q Consensus 318 ---~l~lhv--s~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F--~~~gIPAvtls~~~~~~d~ 390 (561)
...+.. ...+.+ ..+.+.++++|++.|+++.... . ....+||..| +..|+|++.++-. . .
T Consensus 252 ~~~g~~i~~~~~~~~~~---~~l~~~l~~~a~~~gi~~q~~~---~---~ggGsDa~~~~~~~~GiPt~~lg~~-~--~- 318 (349)
T 2gre_A 252 DEYTVSICAKDSSGPYH---YALRKHLVELAKTNHIEYKVDI---Y---PYYGSDASAAIRAGFDVKHALIGAG-I--D- 318 (349)
T ss_dssp CTTSEEEEEEETTEECC---HHHHHHHHHHHHHHTCCEEEEE---C---SCC--------CCSSSCEEEEEEEC-C--B-
T ss_pred CCCceEEEEccCCCCCC---HHHHHHHHHHHHHcCCCcEEec---c---CCCCccHHHHHHhCCCCcEEEeccC-c--c-
Confidence 111111 111222 3566777778888887765411 0 1235788888 4589999988652 2 1
Q ss_pred cccCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 008568 391 LESTGGLLDSRHFVDETSFIRSVKLVAESLA 421 (561)
Q Consensus 391 ~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa 421 (561)
+.|| .+.++.+.+...++++.+.+.
T Consensus 319 --~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 319 --SSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp --STTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred --cccc----ceeccHHHHHHHHHHHHHHHh
Confidence 2355 378888888887777766554
No 21
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.98 E-value=1.6e-09 Score=112.34 Aligned_cols=153 Identities=15% Similarity=0.160 Sum_probs=86.6
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC-Cce
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN-NEL 319 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~-~~l 319 (561)
|.||.+|++++|++++.|. +++++|.|+++..||.|..|++++++.. ..+++|++|+.+..+ ...
T Consensus 165 a~D~k~g~a~~l~a~~~l~--------~~~~~i~~~~~~~EE~G~~G~~~~~~~~------~~~~~i~~d~~~~~~~~G~ 230 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV--------SPAYDTYFVFTVQEETGLRGSAVVVEQL------KPTCAIVVETTTAGDNPEL 230 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC--------CCSEEEEEEEECCCC-----CHHHHHHH------CCSEEEEEEEEEECSCSTT
T ss_pred cCccHHHHHHHHHHHHHhh--------ccCCcEEEEEEcccccchhhhHHHhhcc------CCCEEEEEecccCCCCCCC
Confidence 7899999999999999875 2578999999999999999999888742 235788888764320 000
Q ss_pred eEEeccCC------------chhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhc--CCCeEEEEeccC
Q 008568 320 WIHVSKPP------------ENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR--LRVTAATLSELS 385 (561)
Q Consensus 320 ~lhvs~~p------------~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~--~gIPAvtls~~~ 385 (561)
--|.+.+. ....-..+.+.+++++++.|+...... .....+|+..|.. .|||++.+....
T Consensus 231 ~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~~~~~------~~~ggtDa~~~~~~~~GiP~v~~g~~~ 304 (340)
T 2fvg_A 231 EERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQMKR------RTAGGTDAGRYARTAYGVPAGVISTPA 304 (340)
T ss_dssp CCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCCEECC------CC-------------CCSCEEEEEEEE
T ss_pred ccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEEEe------cCCCCccHHHHHhhCCCCcEEEecccc
Confidence 00110000 000012456667777777776654310 1123578888886 799999886532
Q ss_pred CCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 008568 386 AAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAR 422 (561)
Q Consensus 386 ~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~ 422 (561)
. ..|+.. |.++.+.+.+.+++++..+.+
T Consensus 305 --~----~~Hs~~---E~v~~~dl~~~~~ll~~~~~~ 332 (340)
T 2fvg_A 305 --R----YIHSPN---SIIDLNDYENTKKLIKVLVEE 332 (340)
T ss_dssp --E----ESSTTC---EEEEHHHHHHHHHHHHHHHHH
T ss_pred --c----ccCChh---hcccHHHHHHHHHHHHHHHHh
Confidence 1 135655 578888888877777665554
No 22
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.89 E-value=5.7e-09 Score=100.13 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=71.3
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------------C--CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------------A--LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------------~--~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..|++++++|.++ ..|.|++.||+|+++... + ++.||.||.+|++++|++++.|.+..
T Consensus 58 ~~~~i~~~~g~~~-----~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~ 132 (198)
T 1q7l_A 58 YVVTVLTWPGTNP-----TLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEG 132 (198)
T ss_dssp EEEEEEEECCSST-----TSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEEEccCCC-----CCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcC
Confidence 4699999988542 257999999999998631 1 25799999999999999999998743
Q ss_pred CCCCCCCceeEEEEEeCCCCCC-CcchHHHHHh
Q 008568 263 SNPKTRGRYNILFGLTSGGPYN-YNGTHKWLRS 294 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g-~~GS~~~v~~ 294 (561)
.+++++|.|+++.+||.| ..|+++++++
T Consensus 133 ----~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 133 ----HRFPRTIHMTFVPDEEVGGHQGMELFVQR 161 (198)
T ss_dssp ----CCCSSCEEEEEESCGGGTSTTTHHHHTTS
T ss_pred ----CCCCCCEEEEEEcccccCccccHHHHHHh
Confidence 356789999999999997 8999999876
No 23
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=98.66 E-value=7.2e-08 Score=103.91 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=80.7
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhcccC
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLYS 263 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~~ 263 (561)
.||+|++.|.. ..|+|++.||||+++..+ | .+.||.|+..|++++|++++.|.+..
T Consensus 83 ~~v~a~~~~~~------~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~- 155 (479)
T 2zog_A 83 PILLGKLGSDP------QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTG- 155 (479)
T ss_dssp CEEEEEECCCT------TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT-
T ss_pred CEEEEEecCCC------CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhC-
Confidence 79999997522 257999999999998732 1 25789999999999999999998743
Q ss_pred CCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 264 NPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 264 ~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
.+++++|.|+|+.+||.|..|++.++++......+++++++++|.
T Consensus 156 ---~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 156 ---QEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp ---CCCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred ---CCCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 346789999999999999999999998743212346788888875
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=98.65 E-value=1.2e-07 Score=100.35 Aligned_cols=80 Identities=15% Similarity=0.074 Sum_probs=68.2
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCC
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~g 280 (561)
.||+|+++|.++ ..|+|++.||+|+++. .|+.|+.+|++++|++++.|.+.. ..++.+|.|+++.+
T Consensus 58 gnv~a~~~g~~~-----~~~~i~l~aH~D~v~~-----~g~~d~~~g~a~~l~~~~~l~~~~----~~~~~~i~~~~~~~ 123 (408)
T 3n5f_A 58 GNLIGRKEGTNP-----DATVVLVGSHLDSVYN-----GGCFDGPLGVLAGVEVVQTMNEHG----VVTHHPIEVVAFTD 123 (408)
T ss_dssp CCEEEEECCSST-----TSCEEEEEEESCCCTT-----BCSSTTHHHHHHHHHHHHHHHHTT----CCCSSCEEEEEESC
T ss_pred CCEEEEecCCCC-----CCCEEEEEecCCCCCC-----CCccCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEEcC
Confidence 499999998652 2689999999999985 578899999999999999998743 35789999999999
Q ss_pred CCC-----CCcchHHHHHh
Q 008568 281 GPY-----NYNGTHKWLRS 294 (561)
Q Consensus 281 Ee~-----g~~GS~~~v~~ 294 (561)
||. |+.||+.++..
T Consensus 124 EE~~~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 124 EEGARFRFGMIGSRAMAGT 142 (408)
T ss_dssp SSCTTTTCCCHHHHHHHTC
T ss_pred ccccccCCCCcCHHHHHcC
Confidence 995 78899999843
No 25
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.65 E-value=8.2e-08 Score=99.89 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=77.5
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-------------C--CCCCccchhHHHHHHHHHHHHhhcccCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-------------A--LSVGSDSNGSGVVALLEVARLFSLLYSN 264 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-------------~--~~~GAdDNaSGvaaLLELAR~fs~l~~~ 264 (561)
..|++++++|.+. ..|+|++.||||+++... + .+.|+.|+.+|++++|++++.|.+..
T Consensus 52 ~~nv~a~~~g~~~-----~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~-- 124 (356)
T 3ct9_A 52 GNNVWCLSPMFDL-----KKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS-- 124 (356)
T ss_dssp TTEEEEECSSCCT-----TSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--
T ss_pred eeeEEEEEecCCC-----CCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--
Confidence 5799999987321 257999999999998732 1 36799999999999999999997631
Q ss_pred CCCCCceeEEEEEeCCCCC-CCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 265 PKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 265 ~~~~~~~nIlF~~~~gEe~-g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
++.+|.|+|+.+||. |..|+++++++. .+++++|+++--
T Consensus 125 ----~~~~v~~~~~~~EE~~g~~G~~~~~~~~-----~~~d~~i~~ep~ 164 (356)
T 3ct9_A 125 ----QNYNLIYLASCEEEVSGKEGIESVLPGL-----PPVSFAIVGEPT 164 (356)
T ss_dssp ----CSSEEEEEEECCGGGTCTTTHHHHGGGS-----CCCSEEEECCSB
T ss_pred ----CCCCEEEEEEeCcccCCccCHHHHHhhC-----CCCCEEEEcCCC
Confidence 578999999999998 999999998864 245577776643
No 26
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=98.60 E-value=1.4e-07 Score=102.28 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=82.1
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||+|++.|.. ..|+|++.||||+++..+ | .+.|++|+..|++++|++++.|.+..
T Consensus 89 ~~~v~a~~~~~~------~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 89 PPVILAELGSDP------TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp CCEEEEEECCCT------TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEECCCC------CCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 358999996522 357999999999998731 1 25899999999999999999998753
Q ss_pred CCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
..++.+|.|+|..+||.|..|++.++++.....++++++++++|..
T Consensus 163 ----~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 ----QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp ----CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred ----CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 3567899999999999999999999987432224578899998853
No 27
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.56 E-value=1.3e-07 Score=99.44 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=77.7
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC-------------CCCCccchhHHHHHHHHHHHHhhcccCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA-------------LSVGSDSNGSGVVALLEVARLFSLLYSNPK 266 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~-------------~~~GAdDNaSGvaaLLELAR~fs~l~~~~~ 266 (561)
..||+++++|.+ .|+|++.||||+++.... ++.|+.|+..|++++|++++.|.+..
T Consensus 70 ~~~v~a~~~g~~-------~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~---- 138 (393)
T 1cg2_A 70 GDNIVGKIKGRG-------GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYG---- 138 (393)
T ss_dssp SEEEEEEEECSS-------CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTT----
T ss_pred CCeEEEEECCCC-------CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcC----
Confidence 469999998732 368999999999975311 25799999999999999999998743
Q ss_pred CCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 267 TRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 267 ~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
..++.+|.|+|+.+||.|..|++++++.. ..+++++|++|.-
T Consensus 139 ~~~~~~v~~~~~~~EE~g~~G~~~~~~~~----~~~~d~~i~~e~~ 180 (393)
T 1cg2_A 139 VRDYGTITVLFNTDEEKGSFGSRDLIQEE----AKLADYVLSFEPT 180 (393)
T ss_dssp CCCSSEEEEEEESCGGGTTTTTHHHHHHH----HHHCSEEEECCCE
T ss_pred CCCCCCEEEEEEcccccCCccHHHHHHHH----hhcCCEEEEeCCC
Confidence 24567999999999999999999999862 1346778888754
No 28
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=98.55 E-value=2.2e-07 Score=100.45 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=80.0
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||+|+++|.+. ..|+|++.||||+++... | .+.|+.|+.+|++++|++++.|.+..
T Consensus 92 ~~~v~a~~~g~~~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~ 166 (481)
T 2pok_A 92 APFVMAHFKSSRP-----DAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHH 166 (481)
T ss_dssp SCEEEEEECCSST-----TCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEecCCCC-----CCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhc
Confidence 5799999987432 257999999999998632 1 35799999999999999999998752
Q ss_pred CCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
..++.+|.|+|+.+||.|..|++.++++... .+++.+++|+.|.
T Consensus 167 ----~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~-~~~~~d~~i~~~~ 210 (481)
T 2pok_A 167 ----DDLPVNISFIMEGAEESASTDLDKYLEKHAD-KLRGADLLVWEQG 210 (481)
T ss_dssp ----SSCSSEEEEEEESCGGGTTTTHHHHHHHHHH-HHTTCSEEECSCC
T ss_pred ----CCCCCCEEEEEecccccCchhHHHHHHHhHh-hccCCCEEEECCC
Confidence 2467899999999999999999999886311 1233667777764
No 29
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.49 E-value=2.6e-07 Score=98.14 Aligned_cols=100 Identities=11% Similarity=0.039 Sum_probs=78.9
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC-----------------CCCCccchhHHHHHHHHHHHHhhcc
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA-----------------LSVGSDSNGSGVVALLEVARLFSLL 261 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~-----------------~~~GAdDNaSGvaaLLELAR~fs~l 261 (561)
...||+|+++|.+ ..|+|++.||||+++..+. .+.|+.|+.+|++++|++++.|.+.
T Consensus 89 ~~~~via~~~g~~------~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~ 162 (433)
T 3pfo_A 89 GSMQVVATADSDG------KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTA 162 (433)
T ss_dssp GCEEEEEEECCCC------CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEecCC------CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHc
Confidence 3589999998733 2579999999999986421 2459999999999999999999864
Q ss_pred cCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecccc
Q 008568 262 YSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVG 313 (561)
Q Consensus 262 ~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG 313 (561)
. ..++.+|.|+|+.+||.|..|++.++++. -+.+++|+.|--+
T Consensus 163 ~----~~~~~~v~~~~~~~EE~g~~G~~~~~~~~-----~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 163 G----YAPDARVHVQTVTEEESTGNGALSTLMRG-----YRADACLIPEPTG 205 (433)
T ss_dssp T----EEESSCEEEEEESCTTTTCHHHHHHHHTT-----CCCSEEEECCCCS
T ss_pred C----CCCCccEEEEEEecCccCChhHHHHHhcC-----CCCCEEEEeCCCC
Confidence 3 24578999999999999889999998751 2467778777443
No 30
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.40 E-value=6.1e-06 Score=85.12 Aligned_cols=151 Identities=11% Similarity=0.052 Sum_probs=96.2
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCC---
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN--- 317 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~--- 317 (561)
+.||-.|+++++++++.+... .++.++.|+++.+||.|..|++......+ -++.|.+|+-...+.
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~------~~~~~~~~~~t~~EEvG~~Ga~~~~~~i~------~~~~i~~D~~~~~~~~~~ 234 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDA------ELPAEVWLVASSSEEVGLRGGQTATRAVS------PDVAIVLDTACWAKNFDY 234 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTC------CCSSEEEEEEESCCTTSSHHHHHHHHHHC------CSEEEEECCCCCSSTTCC
T ss_pred CcccHHHHHHHHHHHHHhhhc------CCCceEEEEEEcccccchhHHHHhhcccC------CCEEEEEeccccCCCCCC
Confidence 478899999999999998642 24578999999999999999986554322 235677777654210
Q ss_pred ----------ceeEEe-c-cCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchh--cCCCeEEEEec
Q 008568 318 ----------ELWIHV-S-KPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFS--RLRVTAATLSE 383 (561)
Q Consensus 318 ----------~l~lhv-s-~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~--~~gIPAvtls~ 383 (561)
...+.+ . ..+.+ ..+.+.+++++++.|++..... . ..-.+|...|. ..|+|++.+.-
T Consensus 235 ~~~~~~~~~~G~~i~~~~~~~~~~---~~l~~~~~~~a~~~gi~~~~~~---~---~~ggsDa~~~~~~~~gipt~~lg~ 305 (348)
T 1ylo_A 235 GAANHRQIGNGPMLVLSDKSLIAP---PKLTAWIETVAAEIGVPLQADM---F---SNGGTDGGAVHLTGTGVPTLVMGP 305 (348)
T ss_dssp STTCCCCTTSCCEEEEECSSCBCC---HHHHHHHHHHHHHHTCCCEEEE---C---SSCCCHHHHHHTSTTCCCEEEEEC
T ss_pred CccccccCCCCcEEEEeCCCCCCC---HHHHHHHHHHHHHcCCCeEEee---c---CCCcchHHHHHHhcCCCCEEEECc
Confidence 011111 1 11223 3566777788888787665411 0 12246777884 46999998865
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 008568 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLA 421 (561)
Q Consensus 384 ~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa 421 (561)
. . . .-||+. +.++.+.+...++++.+.+.
T Consensus 306 ~-~-~----~~Hs~~---E~~~~~d~~~~~~ll~~~~~ 334 (348)
T 1ylo_A 306 A-T-R----HGHCAA---SIADCRDILQMEQLLSALIQ 334 (348)
T ss_dssp C-C-B----SCSSSC---EEEEHHHHHHHHHHHHHHHH
T ss_pred c-c-C----cCCCcc---eEeeHHHHHHHHHHHHHHHH
Confidence 3 2 1 225554 67888888877666655443
No 31
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=98.30 E-value=9e-07 Score=94.43 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=74.1
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC--C----------------------------------------
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA--L---------------------------------------- 237 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~--~---------------------------------------- 237 (561)
..||+|+++|.++ ...|+|++.+|+|+++..++ .
T Consensus 80 ~~nv~a~~~g~~~----~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i 155 (434)
T 3ife_A 80 NGYVMATLPANTD----KDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTII 155 (434)
T ss_dssp TSCEEEEECCBSS----SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEE
T ss_pred CcEEEEEeCCCCC----CCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEE
Confidence 4699999998652 13689999999999975221 0
Q ss_pred -CCC----ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 238 -SVG----SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 238 -~~G----AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
+.| +.|+..|++++|++++.|.+.. ..++.+|.|+|+.+||.| .|++++... .+ ++++++++|.
T Consensus 156 ~grG~t~~~~D~K~gva~~l~a~~~L~~~~----~~~~~~i~~if~~~EE~g-~Ga~~~~~~----~~-~~d~~~~~d~ 224 (434)
T 3ife_A 156 TTDGTTLLGADDKAGLTEIMVAMNYLIHNP----QIKHGKIRVAFTPDEEIG-RGPAHFDVE----AF-GASFAYMMDG 224 (434)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHTCT----TSCBCCEEEEEESCGGGT-CTGGGCCHH----HH-CCSEEEECCC
T ss_pred ECCCccchhhhhHHHHHHHHHHHHHHHhCC----CCCCCCEEEEEECCcccC-hHHHHhhhh----hc-CCCEEEEecC
Confidence 112 4788999999999999998643 356889999999999999 899876432 12 4678888884
No 32
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.30 E-value=1.4e-06 Score=90.65 Aligned_cols=98 Identities=21% Similarity=0.224 Sum_probs=74.0
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC----------CCCCc----cchhHHHHHHHHHHHHhhcccCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA----------LSVGS----DSNGSGVVALLEVARLFSLLYSNP 265 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~----------~~~GA----dDNaSGvaaLLELAR~fs~l~~~~ 265 (561)
..||+|+++|.++ ..|+|++.||+|+++.... .+.|+ .|+..|++++|++++.|.+..
T Consensus 56 ~~nv~a~~~g~~~-----~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~--- 127 (373)
T 3gb0_A 56 AGNLICTLPATKD-----GVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKN--- 127 (373)
T ss_dssp SCCEEEEECCSST-----TCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ceeEEEEecCCCC-----CCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcC---
Confidence 5799999998532 3679999999999964221 24576 488899999999999998642
Q ss_pred CCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 266 KTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 266 ~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
.++.+|.|+|+.+||.|..|++.+..+ .. +.++.+++|.-
T Consensus 128 --~~~~~v~~~~~~~EE~g~~Ga~~~~~~----~~-~~~~~~~~~~~ 167 (373)
T 3gb0_A 128 --IPHGTIEFIITVGEESGLVGAKALDRE----RI-TAKYGYALDSD 167 (373)
T ss_dssp --CCCCCEEEEEESCGGGTSHHHHHSCGG----GC-CCSEEEEEEEC
T ss_pred --CCCCCEEEEEEeccccCchhhhhhCHH----hc-CCCEEEEEcCC
Confidence 256899999999999999999987542 11 34566666643
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.29 E-value=2.8e-06 Score=88.18 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=75.8
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC----------CCCCccchhHHHHHHHHHHHHhhcccCCCCCCCc
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA----------LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGR 270 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~----------~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~ 270 (561)
.|++++++|.+ .|+|++.||+|+++..+. .+.|+.|+-+|++++|++++.|++. ..++
T Consensus 58 ~~~~a~~~~~~-------~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-----~~~~ 125 (369)
T 3tx8_A 58 NNVLARTNRGL-------ASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-----TELK 125 (369)
T ss_dssp TEEEEECCCCC-------SCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-----TTCC
T ss_pred CcEEEEecCCC-------CCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-----cCCC
Confidence 58999997632 579999999999987321 3579999999999999999999752 2467
Q ss_pred eeEEEEEeCCCCCCC--cchHHHHHhcchhhhcCeeEEEEecc
Q 008568 271 YNILFGLTSGGPYNY--NGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 271 ~nIlF~~~~gEe~g~--~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
.+|.|+|+.+||.|. .|++++++.... . -+.+++|+.|.
T Consensus 126 ~~v~~~~~~~EE~g~~~~G~~~~~~~~~~-~-~~~~~~i~~ep 166 (369)
T 3tx8_A 126 HDLTLIAYECEEVADHLNGLGHIRDEHPE-W-LAADLALLGEP 166 (369)
T ss_dssp SEEEEEEECCCSSCTTSCHHHHHHHHCGG-G-GCCSEEEECCC
T ss_pred ccEEEEEEeccccCcccccHHHHHHhccc-c-cCCCEEEEeCC
Confidence 899999999999987 799999987421 1 23567777664
No 34
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=98.27 E-value=3.8e-06 Score=88.18 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=74.2
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C--------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~--------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||++++ |.+ .|+|++.||+|+++..+ | .+.|+.|+.+|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~~-------~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~ 122 (393)
T 1vgy_A 51 TKNIWLRR-GTK-------APVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKH 122 (393)
T ss_dssp BCEEEEEE-CSS-------SSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEE-CCC-------CCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhc
Confidence 57999998 632 47999999999998743 1 35789899999999999999887643
Q ss_pred CCCCCCCceeEEEEEeCCCCC-CCcchHHHHHhcchhhhcCeeEEEEec
Q 008568 263 SNPKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLN 310 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~-g~~GS~~~v~~~~~~~l~~I~~vlnLD 310 (561)
..++.+|.|+|+.+||. +..|++.+++.+.. ...++++++..+
T Consensus 123 ----~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~-~~~~~d~~i~~e 166 (393)
T 1vgy_A 123 ----PNHQGSIALLITSDEEGDALDGTTKVVDVLKA-RDELIDYCIVGE 166 (393)
T ss_dssp ----TTCSSEEEEEEESCSSSCCTTSHHHHHHHHHH-TTCCEEEEEECC
T ss_pred ----CCCCCcEEEEEEeccccCCcCCHHHHHHHHHh-cCcCCCEEEEeC
Confidence 24678999999999997 57999988875321 112456666554
No 35
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=98.26 E-value=2.5e-06 Score=92.05 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=79.0
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-C----------------CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A----------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-~----------------~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..||+|.++| + ..|+|++.||||+++... | .+.|+.|+-.|++++|++++.|.+..
T Consensus 77 ~~~v~a~~~g-~------~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~ 149 (472)
T 3pfe_A 77 TPLLFMEIPG-Q------IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQG 149 (472)
T ss_dssp CCEEEEEECC-S------EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEEcC-C------CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcC
Confidence 4799999987 2 157999999999998621 1 24699999999999999999998753
Q ss_pred CCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
..++ +|.|+|..+||.|..|++.++++... .++++++++++|.
T Consensus 150 ----~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~-~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 150 ----LPYP-RCILIIEACEESGSYDLPFYIELLKE-RIGKPSLVICLDS 192 (472)
T ss_dssp ----CCCE-EEEEEEESCGGGTSTTHHHHHHHHHH-HHCCCSEEEEECC
T ss_pred ----CCCC-cEEEEEEeCCCCCChhHHHHHHHhHh-hccCCCEEEEeCC
Confidence 2345 99999999999999999999987421 2456888999984
No 36
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=98.25 E-value=4.3e-06 Score=88.68 Aligned_cols=93 Identities=15% Similarity=0.224 Sum_probs=70.2
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-----------CC--CCCccchhHHHHHHHHHHHHhhcccCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------AL--SVGSDSNGSGVVALLEVARLFSLLYSNPK 266 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-----------~~--~~GAdDNaSGvaaLLELAR~fs~l~~~~~ 266 (561)
..|++++++|.+ + |+|++.||||+++... +. +.|+ + .|++++|++++.|.+..
T Consensus 71 ~~~l~a~~~~~~------~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~--d-~~~a~~l~a~~~l~~~~---- 136 (418)
T 1xmb_A 71 ITGVIGYIGTGE------P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGH--D-GHVTMLLGAAKILHEHR---- 136 (418)
T ss_dssp TTEEEEEEESSS------S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSH--H-HHHHHHHHHHHHHHHTG----
T ss_pred CcEEEEEEcCCC------C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCc--h-HHHHHHHHHHHHHHhcc----
Confidence 469999998632 2 7999999999998642 22 2344 3 69999999999998743
Q ss_pred CCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEec
Q 008568 267 TRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLN 310 (561)
Q Consensus 267 ~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD 310 (561)
..++.+|.|+|+.+|| |..|+++++++. .+++++++++++
T Consensus 137 ~~~~~~v~~~~~~~EE-g~~G~~~~~~~g---~~~~~d~~i~~~ 176 (418)
T 1xmb_A 137 HHLQGTVVLIFQPAEE-GLSGAKKMREEG---ALKNVEAIFGIH 176 (418)
T ss_dssp GGCSSEEEEEEECCTT-TTCHHHHHHHTT---TTTTEEEEEEEE
T ss_pred ccCCceEEEEEecccc-ccccHHHHHHcC---CcCCCCEEEEEe
Confidence 2467899999999999 999999999862 234466676653
No 37
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=98.24 E-value=9.1e-07 Score=92.23 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=74.1
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCC----C-----CC--CCCCccchhHHHHHHHHHHHHhhcccCCCCCCC
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGA----A-----PA--LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~----~-----~~--~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~ 269 (561)
.|+++.++|.... ..|+|++.||+|+++. + ++ .+.|+.|+.+|++++|++++.|.+.. .++
T Consensus 51 ~~~~~~~~~~~~~----~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~----~~~ 122 (364)
T 2rb7_A 51 HDGIPSVMVLPEK----GRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNAL----KAA 122 (364)
T ss_dssp ETTEEEEEECSBT----TEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHH----HHT
T ss_pred CCCceEEEEEcCC----CCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhC----CCC
Confidence 5778888763211 3579999999999976 2 22 46789999999999999999998643 123
Q ss_pred ---cee--EEEEEeCCCCC-CCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 270 ---RYN--ILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 270 ---~~n--IlF~~~~gEe~-g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
+.+ |.|+|+.+||. |..|+++++++. +.+++|++|.
T Consensus 123 ~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~------~~d~~i~~d~ 164 (364)
T 2rb7_A 123 GRSQKDMALGLLITGDEEIGGMNGAAKALPLI------RADYVVALDG 164 (364)
T ss_dssp TCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC------EEEEEEECSS
T ss_pred cccCCCccEEEEEEeccccCchhhHHHHHhcC------CCCEEEEccC
Confidence 457 99999999996 789999888763 4567788764
No 38
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=98.22 E-value=1.5e-06 Score=92.01 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=66.4
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCC
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~g 280 (561)
.||+|+++|.++ ..|+|++.||+|+++. .|..|+..|++++|++++.|.+.. .+++.+|.|+++.+
T Consensus 62 gnv~a~~~g~~~-----~~~~i~l~~H~D~Vp~-----~g~~D~k~g~a~~l~a~~~l~~~~----~~~~~~v~~i~~~~ 127 (423)
T 1z2l_A 62 GNLYGRLNGTEY-----PQEVVLSGSHIDTVVN-----GGNLDGQFGALAAWLAIDWLKTQY----GAPLRTVEVVAMAE 127 (423)
T ss_dssp SCEEEEECCSSE-----EEEEEEEEEECCCCTT-----BCSSTTHHHHHHHHHHHHHHHHHH----CSCSEEEEEEEESC
T ss_pred CcEEEEEcCCCC-----CCCEEEEEEecCCCCC-----CCccCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEEcC
Confidence 399999987542 2479999999999986 367899999999999999998754 34688999999999
Q ss_pred CCC-----CCcchHHHHH
Q 008568 281 GPY-----NYNGTHKWLR 293 (561)
Q Consensus 281 Ee~-----g~~GS~~~v~ 293 (561)
||. |+.||+.+++
T Consensus 128 EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 128 EEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp SSCCSSSCSCHHHHHHTT
T ss_pred ccccccCCCcccHHHHHc
Confidence 997 5779998886
No 39
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.20 E-value=6.8e-06 Score=86.77 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=70.3
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-----------CCCCCccchhHHHHHHHHHHHHhhcccCCCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTR 268 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-----------~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~ 268 (561)
..||+|+++|.++ .|+|++.||||+++... +.-.|.+.+ .|++++|++++.|++.. ..
T Consensus 76 ~~nv~a~~~g~~~------~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k-g~~a~~l~a~~~l~~~~----~~ 144 (404)
T 1ysj_A 76 KTGVIAEIKGRED------GPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD-FHTASIIGTAMLLNQRR----AE 144 (404)
T ss_dssp SSCEEEEEECSSC------CCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH-HHHHHHHHHHHHHHTCG----GG
T ss_pred CceEEEEEeCCCC------CCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh-HHHHHHHHHHHHHHhcc----cc
Confidence 4699999987532 47999999999998642 222233333 68999999999998743 24
Q ss_pred CceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEe
Q 008568 269 GRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICL 309 (561)
Q Consensus 269 ~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnL 309 (561)
++.+|.|+|+.+||. ..|+++++++- .++++++++.+
T Consensus 145 ~~~~v~~~~~~~EE~-~~G~~~~~~~g---~~~~~d~~i~~ 181 (404)
T 1ysj_A 145 LKGTVRFIFQPAEEI-AAGARKVLEAG---VLNGVSAIFGM 181 (404)
T ss_dssp CSSEEEEEEESCTTT-TCHHHHHHHTT---TTTTEEEEEEE
T ss_pred CCceEEEEEeccccc-chhHHHHHhcC---CCcCCCEEEEE
Confidence 678999999999998 78999999851 23456666665
No 40
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.16 E-value=5.4e-05 Score=78.07 Aligned_cols=152 Identities=12% Similarity=0.077 Sum_probs=92.6
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC--C-
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--N- 317 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~--~- 317 (561)
+.||-.|+++++++++.+.+. .++.++.|+++.+||.|..|++......+ -.+.|.+|+-...+ .
T Consensus 170 ~~D~r~g~aa~l~al~~l~~~------~~~~~~~~~~t~~EEvG~~Ga~~~~~~i~------~~~~i~~D~~~~~~~~~~ 237 (346)
T 1vho_A 170 ALDNRASCGVLVKVLEFLKRY------DHPWDVYVVFSVQEETGCLGALTGAYEIN------PDAAIVMDVTFASEPPFS 237 (346)
T ss_dssp THHHHHHHHHHHHHHHHHTTC------CCSSEEEEEEECTTSSSHHHHHHTTCCCC------CSEEEEEEEECCCCTTSC
T ss_pred cCccHHHHHHHHHHHHHhhhc------CCCceEEEEEECCcccchhhHHHHhcccC------CCEEEEeecccccCCCCC
Confidence 468999999999999998642 24578999999999999999885433221 23456666654321 0
Q ss_pred -------ceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccch--hcCCCeEEEEeccCCCC
Q 008568 318 -------ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSELSAAP 388 (561)
Q Consensus 318 -------~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F--~~~gIPAvtls~~~~~~ 388 (561)
...+.+ ..+.+ ..+.+.+.+++++.|++....... ..-.+|...| +..++|++.+.-.. .
T Consensus 238 ~~~~~~~g~~i~~-~~~~~---~~l~~~~~~~a~~~gi~~~~~~~~-----g~ggsDa~~~~~~~~gipt~~lg~~~--~ 306 (346)
T 1vho_A 238 DHIELGKGPVIGL-GPVVD---RNLVQKIIEIAKKHNVSLQEEAVG-----GRSGTETDFVQLVRNGVRTSLISIPL--K 306 (346)
T ss_dssp CCCCTTSCCEEEC-STTSC---HHHHHHHHHHHHHTTCCCEEESSC-----CC----CTTHHHHHTTCEEEEEEEEC--B
T ss_pred cccccCCCceEEe-CCcCC---HHHHHHHHHHHHHCCCCEEEEeCC-----CCCCchHHHHHHhCCCCcEEEEehhh--c
Confidence 001111 11122 356677778888877766542110 0024677777 45799999886532 1
Q ss_pred CccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 008568 389 ELLESTGGLLDSRHFVDETSFIRSVKLVAESLAR 422 (561)
Q Consensus 389 d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa~ 422 (561)
.-|++. +.++.+.+...++++.+.+.+
T Consensus 307 ----~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 333 (346)
T 1vho_A 307 ----YMHTPV---EMVDPRDVEELARLLSLVAVE 333 (346)
T ss_dssp ----STTSTT---EEECHHHHHHHHHHHHHHHHH
T ss_pred ----ccccHH---HhcCHHHHHHHHHHHHHHHHH
Confidence 125554 678888888777766555543
No 41
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=98.16 E-value=7.8e-06 Score=84.55 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=72.7
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------------C--CCCCccchhHHHHHHHHHHHHhhccc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------------A--LSVGSDSNGSGVVALLEVARLFSLLY 262 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------------~--~~~GAdDNaSGvaaLLELAR~fs~l~ 262 (561)
..|++|++ |.+ .|+|++.||+|+++..+ + .+.|+.|+-.|++++|+.++.+.+..
T Consensus 48 ~~n~~a~~-g~~-------~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~ 119 (377)
T 3isz_A 48 TLNLWAKH-GTS-------EPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 119 (377)
T ss_dssp BCEEEEEE-ESS-------SCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEe-CCC-------CCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhC
Confidence 57999988 522 57999999999998732 1 24688899999999999888876643
Q ss_pred CCCCCCCceeEEEEEeCCCCCCC-cchHHHHHhcchhhhcCeeEEEEec
Q 008568 263 SNPKTRGRYNILFGLTSGGPYNY-NGTHKWLRSFDQRLRESIDYAICLN 310 (561)
Q Consensus 263 ~~~~~~~~~nIlF~~~~gEe~g~-~GS~~~v~~~~~~~l~~I~~vlnLD 310 (561)
..++.+|.|+++.+||.+. .|++.+++.+.. ...++++++..+
T Consensus 120 ----~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~-~~~~~d~~~~~e 163 (377)
T 3isz_A 120 ----PNHKGTIALLITSDEEATAKDGTIHVVETLMA-RDEKITYCMVGE 163 (377)
T ss_dssp ----TTCSSEEEEEEESCSSSCCSSSHHHHHHHHHH-TTCCCCEEEECC
T ss_pred ----CCCCceEEEEEEcccccCccccHHHHHHHHHh-cCCCCCEEEEcC
Confidence 2467899999999999876 699998875321 112456666543
No 42
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=98.12 E-value=5.1e-06 Score=90.33 Aligned_cols=84 Identities=11% Similarity=0.178 Sum_probs=68.1
Q ss_pred eEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-C--------------CCCCccchhHHHHHHHHHHHHhhcccCCCC
Q 008568 202 NIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A--------------LSVGSDSNGSGVVALLEVARLFSLLYSNPK 266 (561)
Q Consensus 202 NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-~--------------~~~GAdDNaSGvaaLLELAR~fs~l~~~~~ 266 (561)
|++|.+++ +. ..|+|++.+|||+++..+ | ++.|+.|+-+|++++|++++.|.+..
T Consensus 88 ~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~---- 157 (492)
T 3khx_A 88 HIAGRIEA-GK-----GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMN---- 157 (492)
T ss_dssp TTEEEEEE-EC-----SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTT----
T ss_pred CEEEEEEe-CC-----CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcC----
Confidence 56776652 11 257999999999998743 1 24699999999999999999998743
Q ss_pred CCCceeEEEEEeCCCCCCCcchHHHHHhc
Q 008568 267 TRGRYNILFGLTSGGPYNYNGTHKWLRSF 295 (561)
Q Consensus 267 ~~~~~nIlF~~~~gEe~g~~GS~~~v~~~ 295 (561)
.+++.+|.|+|+.+||.|..|+++++++.
T Consensus 158 ~~~~~~i~~~~~~~EE~g~~g~~~~~~~~ 186 (492)
T 3khx_A 158 VDWKKRIHMIIGTDEESDWKCTDRYFKTE 186 (492)
T ss_dssp CCCSSEEEEEEECCTTCCCCTTSHHHHHS
T ss_pred CCCCCCEEEEEECCccCCCcCHHHHHHhC
Confidence 35688999999999999999999999974
No 43
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=98.11 E-value=4.6e-06 Score=90.16 Aligned_cols=78 Identities=23% Similarity=0.174 Sum_probs=64.8
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCC
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~g 280 (561)
.||+|+++|.++ .|+|++.+|||+++.. |.-|+..|++++|++++.|.+.. .+++.+|.|+|+.+
T Consensus 93 gnvia~~~g~~~------~~~i~l~~H~DtVp~~-----g~~D~k~gvaa~L~a~~~L~~~~----~~~~~~v~lif~~d 157 (474)
T 2v8h_A 93 GNMFAVYPGKNG------GKPTATGSHLDTQPEA-----GKYDGILGVLAGLEVLRTFKDNN----YVPNYDVCVVVWFN 157 (474)
T ss_dssp CCEEEEECCSSC------CSCEEEEECCCCCSSB-----CSSTTHHHHHHHHHHHHHHHHHT----CCCSSCEEEEECTT
T ss_pred ceEEEEECCCCC------CCeEEEEEecccCCCC-----CCcCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEECC
Confidence 489999987542 3589999999999874 33488899999999999998753 34678999999999
Q ss_pred CCC-----CCcchHHHHH
Q 008568 281 GPY-----NYNGTHKWLR 293 (561)
Q Consensus 281 Ee~-----g~~GS~~~v~ 293 (561)
||. |+.||+.+++
T Consensus 158 EE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 158 AEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CSCSSSSCTTHHHHHHTT
T ss_pred ccCCCCCCCcccHHHHHh
Confidence 998 7889999875
No 44
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=98.10 E-value=6e-06 Score=85.97 Aligned_cols=87 Identities=16% Similarity=0.178 Sum_probs=70.3
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-C--------------CCCCccchhHHHHHHHHHHHHhhcccCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A--------------LSVGSDSNGSGVVALLEVARLFSLLYSN 264 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-~--------------~~~GAdDNaSGvaaLLELAR~fs~l~~~ 264 (561)
..|+++ ++|. |+|++.||+|+++..+ | .+.|+.|+..|++++|++++.
T Consensus 58 ~~~~~a-~~g~---------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~------- 120 (369)
T 2f7v_A 58 AVSLYA-VRGT---------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA------- 120 (369)
T ss_dssp CEEEEE-EESC---------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------
T ss_pred ceEEEE-EcCC---------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------
Confidence 479999 8762 5799999999998743 2 256899999999999999875
Q ss_pred CCCCCceeEEEEEeCCCCC-CCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 265 PKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 265 ~~~~~~~nIlF~~~~gEe~-g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
++.+|.|+|+.+||. |..|+++++++.. +.+++|++|.-
T Consensus 121 ----~~~~v~~~~~~~EE~~g~~G~~~~~~~~~-----~~d~~i~~e~~ 160 (369)
T 2f7v_A 121 ----GDGDAAFLFSSDEEANDPRCIAAFLARGL-----PYDAVLVAEPT 160 (369)
T ss_dssp ----CCCCEEEEEESCTTSSSCCHHHHHHTTCC-----CCSEEEECCCS
T ss_pred ----CCCCEEEEEEeCcccCCCcCHHHHHhcCC-----CCCEEEECCCC
Confidence 357899999999999 8999999998631 46677777653
No 45
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.10 E-value=5.1e-06 Score=87.38 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=72.8
Q ss_pred CcceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---------C--CCCCc----cchhHHHHHHHHHHHHhhcccC
Q 008568 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------A--LSVGS----DSNGSGVVALLEVARLFSLLYS 263 (561)
Q Consensus 199 ~~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---------~--~~~GA----dDNaSGvaaLLELAR~fs~l~~ 263 (561)
...||+|+++|... ....|+|++.||||+++... + .+.|+ .|+..|++++|++++.|.+..
T Consensus 73 ~~~nvia~~~g~~~---~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~- 148 (396)
T 3rza_A 73 GANNLVCTMNSTIE---EGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ- 148 (396)
T ss_dssp SSCCEEEEECCCCC------CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCceEEEEECCcCC---CCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-
Confidence 35799999988511 01368999999999996421 1 34566 488899999999999998642
Q ss_pred CCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 264 NPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 264 ~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
.++.+|.|+|+.+||.|..|++.++.+ .+ +..+.+++|.
T Consensus 149 ----~~~~~v~~~~~~~EE~g~~Ga~~~~~~----~~-~~~~~~~~~~ 187 (396)
T 3rza_A 149 ----IPHGQIQFVITVGEESGLIGAKELNSE----LL-DADFGYAIDA 187 (396)
T ss_dssp ----CCCCCEEEEEESCGGGTSHHHHHCCGG----GC-CCSEEEEEEE
T ss_pred ----CCCCCEEEEEEcccccccHhHhhhchh----hc-ccceEEEEec
Confidence 246899999999999999999987543 11 2345666664
No 46
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=98.06 E-value=6.2e-06 Score=87.22 Aligned_cols=98 Identities=12% Similarity=0.152 Sum_probs=72.2
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCC--C----------------------------------------
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA--L---------------------------------------- 237 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~--~---------------------------------------- 237 (561)
..||+|+++|.++ ...|+|++.||+|+++..+. .
T Consensus 55 ~~nvia~~~g~~~----~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~ 130 (417)
T 1fno_A 55 KGTLMATLPANVE----GDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLIT 130 (417)
T ss_dssp TCCEEEEECCSSC----SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEE
T ss_pred CceEEEEECCCCC----CCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEE
Confidence 3699999987542 02579999999999976421 0
Q ss_pred CCCc----cchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 238 SVGS----DSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 238 ~~GA----dDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
+-|+ .|+..|++++|++++.|++.. .++.+|.|+|+.+||.| .|+++++++ .+ +.++++++|.-
T Consensus 131 grGat~l~~D~K~g~a~~l~a~~~l~~~~-----~~~~~v~~~~~~~EE~g-~Ga~~~~~~----~~-~~d~~i~~d~~ 198 (417)
T 1fno_A 131 TDGKTLLGADDKAGVAEIMTALAVLKGNP-----IPHGDIKVAFTPDEEVG-KGAKHFDVE----AF-GAQWAYTVDGG 198 (417)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHHHHSSS-----CCCCCEEEEEESCGGGT-CTTTTCCHH----HH-CCSEEEECCCC
T ss_pred cCCccccccccHHhHHHHHHHHHHHHhCC-----CCCCcEEEEEEeccccC-CChhhhchh----hc-CCCEEEEeCCC
Confidence 0243 788899999999999998632 35789999999999999 999876533 11 35567777753
No 47
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=98.03 E-value=1.4e-05 Score=85.76 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=66.4
Q ss_pred eEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC-C---------------CCCCccchhHHHHHHHHHHHHhhcccCCC
Q 008568 202 NIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A---------------LSVGSDSNGSGVVALLEVARLFSLLYSNP 265 (561)
Q Consensus 202 NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~-~---------------~~~GAdDNaSGvaaLLELAR~fs~l~~~~ 265 (561)
++++.+ |.+ .|+|++.||||+++..+ | .+.|+.|+..|++++|++++.|.+..
T Consensus 70 ~~~~~~-g~~-------~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~--- 138 (470)
T 1lfw_A 70 AGRVNF-GAG-------DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAG--- 138 (470)
T ss_dssp EEEEEE-CCC-------SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEe-CCC-------CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcC---
Confidence 566666 521 47999999999998643 1 35788999999999999999998743
Q ss_pred CCCCceeEEEEEeCCCCCCCcchHHHHHh
Q 008568 266 KTRGRYNILFGLTSGGPYNYNGTHKWLRS 294 (561)
Q Consensus 266 ~~~~~~nIlF~~~~gEe~g~~GS~~~v~~ 294 (561)
.+++.+|.|+|+.+||.|..|+++++++
T Consensus 139 -~~~~~~i~~i~~~~EE~g~~G~~~~~~~ 166 (470)
T 1lfw_A 139 -FKPKKKIDFVLGTNEETNWVGIDYYLKH 166 (470)
T ss_dssp -CCCSSEEEEEEESCTTTTCHHHHHHHHH
T ss_pred -CCCCCCEEEEEecCcccCCccHHHHHHh
Confidence 3467899999999999999999999986
No 48
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=97.99 E-value=3e-05 Score=79.73 Aligned_cols=149 Identities=11% Similarity=0.004 Sum_probs=94.6
Q ss_pred ccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC----
Q 008568 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN---- 316 (561)
Q Consensus 241 AdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~---- 316 (561)
+-||-.|++++|++++.+. + +.|+|+..||.|..|++....-.. .. -+..++|++|+-...+
T Consensus 163 ~~D~k~G~aa~l~al~~l~---------~---i~~~~t~~EEvG~~Ga~~a~~~~~-~~-~~~~~~i~~D~~~~~~~~~~ 228 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTLE---------H---GIIAFTCWEEHGGGSVAYLARWIY-ET-FHVKQSLICDITWVTEGVEA 228 (321)
T ss_dssp THHHHHHHHHHHHHTTTCC---------S---EEEEEESSTTTTCCSHHHHHHHHH-HH-HCCCEEEECCCEECCSSSCT
T ss_pred CCcCHHHHHHHHHHHHHhc---------C---cEEEEECCccCchhcchhhhhccc-cc-cCCCEEEEEeCccccCCccc
Confidence 5789999999999987642 1 789999999999999995322000 01 1235788888765321
Q ss_pred -CceeEEe-ccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccch--hcCCCeEEEEeccCCCCCccc
Q 008568 317 -NELWIHV-SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSELSAAPELLE 392 (561)
Q Consensus 317 -~~l~lhv-s~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F--~~~gIPAvtls~~~~~~d~~~ 392 (561)
...-+.+ ..++.+ ..+++.++++|++.|++.+.... ..-.+|--.+ +..|||++.+.-...
T Consensus 229 ~~G~~i~~~~~~~~~---~~l~~~~~~~a~~~gi~~q~~~~------~~GGsD~~~~~~s~~Gipt~~lG~~~~------ 293 (321)
T 3cpx_A 229 GKGVAISMRDRMIPR---KKYVNRIIELARQTDIPFQLEVE------GAGASDGRELQLSPYPWDWCFIGAPEK------ 293 (321)
T ss_dssp TSCEEEEEESSSCCC---HHHHHHHHHHHTTSSCCEEEEEC------SSCCCHHHHHHHSSSCCBCCBEECEEB------
T ss_pred CCCcEEEECCCCCCC---HHHHHHHHHHHHHcCCCEEEEeC------CCCCccHHHHHHhCCCCCEEEEchhhc------
Confidence 1111111 122223 46777778888887877664211 1124666666 668999997765321
Q ss_pred cCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 008568 393 STGGLLDSRHFVDETSFIRSVKLVAESLA 421 (561)
Q Consensus 393 ~r~si~Dt~d~id~~~L~~~~~~vaeaLa 421 (561)
+-||+. +.++.+.+...++++++.+.
T Consensus 294 ~~Hs~~---E~~~~~dl~~~~~ll~~~~~ 319 (321)
T 3cpx_A 294 DAHTPN---ECVHKKDIESMVGLYKYLME 319 (321)
T ss_dssp STTSTT---CEEEHHHHHHHHHHHHHHHH
T ss_pred ccchhh---hheeHHHHHHHHHHHHHHHH
Confidence 225655 77888999888888776554
No 49
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=97.94 E-value=1.8e-05 Score=83.38 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=68.9
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCCCCCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTS 279 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~~~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~ 279 (561)
..||+|+++|.++ .|+|++.||+|+++. ...|.+.++-| +++|.+|+.|++.. ..++.+|.|+|+.
T Consensus 61 ~~~via~~~g~~~------g~~i~l~ah~D~vpg---~~ha~G~d~~~-a~~l~aa~~L~~~~----~~~~g~v~~~f~~ 126 (394)
T 3ram_A 61 ATGFIATYDSGLD------GPAIGFLAEYDALPG---LGHACGHNIIG-TASVLGAIGLKQVI----DQIGGKVVVLGCP 126 (394)
T ss_dssp EEEEEEEEECSSS------SCEEEEEECCCCCTT---TSSTTCHHHHH-HHHHHHHHHHHTTH----HHHCSEEEEEECC
T ss_pred ceEEEEEEeCCCC------CCEEEEEEecccCCC---cceECCccHHH-HHHHHHHHHHHHhH----hhCCceEEEEEEC
Confidence 4699999987442 489999999999973 23333345544 56788888887643 2457899999999
Q ss_pred CCCCC-CcchH-HHHHhcchhhhcCeeEEEEecc
Q 008568 280 GGPYN-YNGTH-KWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 280 gEe~g-~~GS~-~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
+||.| ..|++ .+++.- .++++++++.++-
T Consensus 127 ~EE~~~~~Ga~~~~~~~g---~~~~~d~~~~~h~ 157 (394)
T 3ram_A 127 AEEGGENGSAKASYVKAG---VIDQIDIALMIHP 157 (394)
T ss_dssp CTTCCTTCCHHHHHHHHT---GGGGCSEEECCEE
T ss_pred CccCCCCCchHHHHHHcC---CcccCCEEEEECC
Confidence 99998 59999 777751 2356777777653
No 50
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.91 E-value=1.3e-05 Score=86.64 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=70.1
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC------C--------------CCCCcc---chhHHHHHHHHHHHH
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP------A--------------LSVGSD---SNGSGVVALLEVARL 257 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~------~--------------~~~GAd---DNaSGvaaLLELAR~ 257 (561)
.|++|+++|.+.. ...|+|++.||+|+++... | .+.|++ |+..|++++|++++.
T Consensus 54 ~nv~a~~~g~~g~---~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~ 130 (487)
T 2qyv_A 54 GNVLIRKPATVGM---ENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES 130 (487)
T ss_dssp CCEEEEECCCTTC---TTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC
T ss_pred CcEEEEeCCCCCC---CCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh
Confidence 5999999874210 1357999999999998742 1 134887 999999999999873
Q ss_pred hhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccc
Q 008568 258 FSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (561)
Q Consensus 258 fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~i 312 (561)
. + .++.+|.|+|+.+||.|..|+++++++. + +.++++++|.-
T Consensus 131 ---~----~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~----~-~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 ---N----D-IAHPELEVLLTMTEERGMEGAIGLRPNW----L-RSEILINTDTE 172 (487)
T ss_dssp ---S----S-SCCSSEEEEEESCTTTTCHHHHTCCSSC----C-CCSEEEECCCC
T ss_pred ---C----C-CCCCCEEEEEEeccccCCHHHHHHHHhc----c-CCCEEEEEccC
Confidence 1 1 2568899999999999999999887641 2 24566666653
No 51
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=97.91 E-value=3.6e-05 Score=82.46 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=68.9
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC---C---------------CCCCccchhHHHHHHHHHHHHhhcc
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A---------------LSVGSDSNGSGVVALLEVARLFSLL 261 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~---~---------------~~~GAdDNaSGvaaLLELAR~fs~l 261 (561)
..||+|+++|.++ .|+|++.||+|+++... | ...|.+-+ .+++++|.+|+.|++.
T Consensus 96 ~~~vva~~~~~~~------g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd-~~~a~~l~aa~~L~~~ 168 (445)
T 3io1_A 96 FAGVVATLDTGRP------GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHD-GHTAIGLGLAHVLKQY 168 (445)
T ss_dssp CCCEEEEEECSSC------CCEEEEEEECCCCCC-------------------------CTTC-THHHHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCC------CCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCch-HHHHHHHHHHHHHHhC
Confidence 4799999987442 47999999999999621 1 11111112 4699999999999875
Q ss_pred cCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEec
Q 008568 262 YSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLN 310 (561)
Q Consensus 262 ~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD 310 (561)
. ..++.+|.|+|+.+|| +..|++.++++- .++++++++.++
T Consensus 169 ~----~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g---~~~~~d~~~~~h 209 (445)
T 3io1_A 169 A----AQLNGVIKLIFQPAEE-GTRGARAMVAAG---VVDDVDYFTAIH 209 (445)
T ss_dssp G----GGCCSEEEEEEESCTT-TTCHHHHHHHTT---TTTTCSEEEEEE
T ss_pred c----CcCCceEEEEEecccc-ccchHHHHHHcC---CccccceeEEEe
Confidence 3 2467899999999999 668999998861 245677777664
No 52
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.86 E-value=1.7e-05 Score=86.27 Aligned_cols=95 Identities=16% Similarity=0.049 Sum_probs=70.8
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC------C--------------CCCCcc---chhHHHHHHHHHHHH
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP------A--------------LSVGSD---SNGSGVVALLEVARL 257 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~------~--------------~~~GAd---DNaSGvaaLLELAR~ 257 (561)
.||+++++|.... ...|+|++.||+|+++..+ | .+.|+. |+..|+|++|++++
T Consensus 57 ~nv~a~~~g~~g~---~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~- 132 (490)
T 3mru_A 57 GNVFIKKPATPGM---ENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA- 132 (490)
T ss_dssp CCEEEEECCCTTC---TTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH-
T ss_pred CeEEEEEcCCCCC---CCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH-
Confidence 5999999985321 1368999999999998742 1 135886 89999999998753
Q ss_pred hhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEecc
Q 008568 258 FSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (561)
Q Consensus 258 fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~ 311 (561)
.. ..++.+|.|+|+.+||.|..|+++++++. + +.++++++|.
T Consensus 133 --~~-----~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~----~-~~~~~~~~d~ 174 (490)
T 3mru_A 133 --SK-----EIKHGPIEVLLTIDEEAGMTGAFGLEAGW----L-KGDILLNTDS 174 (490)
T ss_dssp --CS-----SCCCCSEEEEEESCSSSTTGGGGTCCSSS----C-CSSEEEECCC
T ss_pred --hC-----CCCCCCEEEEEEcccccccHhHHHhhhcc----c-CCCEEEEcCC
Confidence 21 23567899999999999999999877641 1 3467778774
No 53
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=97.61 E-value=0.00052 Score=71.77 Aligned_cols=153 Identities=13% Similarity=0.083 Sum_probs=99.7
Q ss_pred CCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC
Q 008568 237 LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN 316 (561)
Q Consensus 237 ~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~ 316 (561)
+...|-||-.|++++||+++.++.. .+++++.|+|+..||.|+.|++-....+. . +.+|.+|+....+
T Consensus 176 i~s~~lDnr~g~~~~l~~l~~l~~~------~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~----p--d~~i~~D~~~a~d 243 (355)
T 3kl9_A 176 IISKAWDNRYGVLMVSELAEALSGQ------KLGNELYLGSNVQEEVGLRGAHTSTTKFD----P--EVFLAVDCSPAGD 243 (355)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHSSC------CCSSEEEEEEESCCTTTSHHHHHHHHHHC----C--SEEEEEEEEECCG
T ss_pred EEeeccccHHHHHHHHHHHHHhhhc------CCCceEEEEEECccccCcchhHHHHhccC----C--CEEEEecCccCCC
Confidence 3457889999999999999988642 36799999999999999999886655432 2 2467777753321
Q ss_pred ---------C-c-eeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhc--CCCeEEEEec
Q 008568 317 ---------N-E-LWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR--LRVTAATLSE 383 (561)
Q Consensus 317 ---------~-~-l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~--~gIPAvtls~ 383 (561)
. . +-+.-+..+.+ ..+.+.+.++|++.|++.+.... .-.+|...+.. .|+|++.++-
T Consensus 244 ~p~~~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~a~~~gIp~q~~~~-------ggGtDa~~i~~a~~Gipt~~igv 313 (355)
T 3kl9_A 244 VYGGQGKIGDGTLIRFYDPGHLLL---PGMKDFLLTTAEEAGIKYQYYCG-------KGGTDAGAAHLKNGGVPSTTIGV 313 (355)
T ss_dssp GGTSSCCTTSCEEEEEEETTEECC---HHHHHHHHHHHHHTTCCEEEEEC-------SSCCTHHHHTTSTTCCCEEEEEE
T ss_pred CCCcccccCCCcEEEEecCCCCCC---HHHHHHHHHHHHHcCCCEEEECC-------CcchHHHHHHHhCCCCCEEEEcc
Confidence 0 1 11111111123 36677778888888887765211 12567777764 7999998865
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 008568 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESL 420 (561)
Q Consensus 384 ~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaL 420 (561)
. . + .-||+. +.++.+.+...++++.+.+
T Consensus 314 p-~-~----~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (355)
T 3kl9_A 314 C-A-R----YIHSHQ---TLYAMDDFLEAQAFLQALV 341 (355)
T ss_dssp E-E-B----SCSSSC---EEEEHHHHHHHHHHHHHHH
T ss_pred C-c-C----CCCCcc---eEeeHHHHHHHHHHHHHHH
Confidence 2 1 1 225555 6677777776666554443
No 54
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=96.23 E-value=0.054 Score=56.45 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=94.7
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCC-
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN- 316 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~- 316 (561)
...+-||-.|++++||+++.++. +++++.|+|++-||.|+.|++--...+. .+ .+|.+|+--..+
T Consensus 180 ~s~~lDnr~g~~~~l~~l~~l~~--------~~~~v~~~ft~qEEVG~~ga~~aa~~i~----pd--~~i~~Dv~~a~dp 245 (354)
T 2vpu_A 180 ATPYLDDRICLYAMIEAARQLGD--------HEADIYIVGSVQEEVGLRGARVASYAIN----PE--VGIAMDVTFAKQP 245 (354)
T ss_dssp ECTTHHHHHHHHHHHHHHHHCCC--------CSSEEEEEECSCCTTTSHHHHHHHHHHC----CS--EEEEEEEEECCCT
T ss_pred EEecCccHHHHHHHHHHHHHhhc--------CCCeEEEEEECCcccCccchhhhhcccC----CC--EEEEecccccCCC
Confidence 45788999999999999987643 4689999999999999999885444332 22 466666542211
Q ss_pred C-----c--e----eEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCC-CCCcccchh--cCCCeEEEEe
Q 008568 317 N-----E--L----WIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPR-VAWEHEQFS--RLRVTAATLS 382 (561)
Q Consensus 317 ~-----~--l----~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~-~~sdHe~F~--~~gIPAvtls 382 (561)
+ . + .+-. ..+.+ ..+.+.+.++|++.|++.+... .+. -.+|-..+. ..|+|++.++
T Consensus 246 ~~~~~~~~~lg~Gpv~d~-~~~~~---~~l~~~l~~~a~~~gIp~q~~~------~~g~gGtDa~~i~~a~~Gipt~~Ig 315 (354)
T 2vpu_A 246 HDKGKIVPELGKGPVMDV-GPNIN---PKLRAFADEVAKKYEIPLQVEP------SPRPTGTDANVMQINKEGVATAVLS 315 (354)
T ss_dssp TSTTCCCCCTTSCCEEEE-STTSC---HHHHHHHHHHHHHTTCCCEEEE------CCSCCSSTHHHHHTSTTCCEEEEEE
T ss_pred CcccccCceECCcceEcC-CCCCC---HHHHHHHHHHHHHcCCCcEEEe------CCCCCccHHHHHHHhcCCCCEEEEC
Confidence 0 0 0 1111 12222 3566777888888887776421 111 245665664 4699999887
Q ss_pred ccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 008568 383 ELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLA 421 (561)
Q Consensus 383 ~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaeaLa 421 (561)
-... .-||+. +.++.+.+...++++.+.+.
T Consensus 316 vp~~------~~Hs~~---E~~~~~D~~~~~~ll~~~l~ 345 (354)
T 2vpu_A 316 IPIR------YMHSQV---ELADARDVDNTIKLAKALLE 345 (354)
T ss_dssp EEEB------STTSTT---CEEEHHHHHHHHHHHHHHHH
T ss_pred cccc------cCcCcc---eEeeHHHHHHHHHHHHHHHH
Confidence 5211 225555 66778888776666655443
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=95.50 E-value=0.049 Score=56.57 Aligned_cols=151 Identities=14% Similarity=0.106 Sum_probs=92.1
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCeeEEEEeccccCCCC
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN 317 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I~~vlnLD~iG~~~~ 317 (561)
...+-||-.|++++||+++.++. ++++.|+|+.-||.|+.|++--...+. .+ .+|.+|+--..+.
T Consensus 175 ~s~~lDdR~g~~~~l~~l~~l~~---------~~~~~~~ft~qEEVG~~Ga~~aa~~i~----pd--~~i~vDv~~a~d~ 239 (343)
T 3isx_A 175 VSKAMDDRIGCAVIVEVFKRIKP---------AVTLYGVFSVQEEVGLVGASVAGYGVP----AD--EAIAIDVTDSADT 239 (343)
T ss_dssp EESCHHHHHHHHHHHHHHHHCCC---------SSEEEEEEECCCCTTSCCSTTTGGGCC----CS--EEEEEEEEECCCS
T ss_pred EeccCccHHHHHHHHHHHHhccC---------CCeEEEEEECCcccCchhHHHHhhcCC----CC--EEEEEeCcCCCCC
Confidence 34678999999999999887631 578999999999999999874333322 22 4666666422110
Q ss_pred c---------e----eEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccch--hcCCCeEEEEe
Q 008568 318 E---------L----WIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLS 382 (561)
Q Consensus 318 ~---------l----~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F--~~~gIPAvtls 382 (561)
+ + -+..... ....-..+.+.+.++|++.|++.+... . ..-.+|-..+ +..|+|+..++
T Consensus 240 p~~~~~~~~~lg~GpvI~~~d~-~~~~d~~l~~~l~~~A~~~gIp~Q~~v---~---~ggGTDa~~i~~a~~Gipt~~Ig 312 (343)
T 3isx_A 240 PKAIKRHAMRLSGGPALKVKDR-ASISSKRILENLIEIAEKFDIKYQMEV---L---TFGGTNAMGYQRTREGIPSATVS 312 (343)
T ss_dssp TTCCCTTCCCTTSCCEEECBTT-CCHHHHHHHHHHHHHHHHTTCCCEECC---C---BCCCSSHHHHHHHTSSCCEEEEE
T ss_pred CCcccccccccCCCcEEEEcCC-CCCCCHHHHHHHHHHHHHCCCCeEEec---C---CCCchHHHHHHHhcCCCCEEEEc
Confidence 0 1 1111000 111234667778888888887776421 1 0124565555 45799999887
Q ss_pred ccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 008568 383 ELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAES 419 (561)
Q Consensus 383 ~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~vaea 419 (561)
-. . +.-||+. +.++.+.+...++++.+.
T Consensus 313 vp-~-----r~~Hs~~---E~~~~~Di~~~~~ll~~~ 340 (343)
T 3isx_A 313 IP-T-----RYVHSPS---EMIAPDDVEATVDLLIRY 340 (343)
T ss_dssp EE-E-----BSTTSTT---EEECHHHHHHHHHHHHHH
T ss_pred cc-c-----ccccchh---hEecHHHHHHHHHHHHHH
Confidence 52 1 1225555 667777777766665443
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=87.66 E-value=0.016 Score=57.00 Aligned_cols=80 Identities=15% Similarity=0.034 Sum_probs=39.1
Q ss_pred ceEEEEecCCCCCCCCCCCCEEEEEeccCCCCCCC------C-CCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeE
Q 008568 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP------A-LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNI 273 (561)
Q Consensus 201 ~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~~~------~-~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nI 273 (561)
.||+|+++|. .|.|++.||+|++|... + ...+..+...|.+++...++.+.. ...+...+
T Consensus 53 GNlia~~~g~--------~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 119 (354)
T 2wzn_A 53 GNVIAHFKGS--------SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTE-----KGERYGVV 119 (354)
T ss_dssp CCEEEEECCS--------SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEET-----TEEEEEEE
T ss_pred CeEEEEECCC--------CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHHHHHHHHHhhc-----cCCccceE
Confidence 5999999762 46899999999987521 1 111222333333333333222211 11234556
Q ss_pred EEEEeCCCCCCCcchHHHHH
Q 008568 274 LFGLTSGGPYNYNGTHKWLR 293 (561)
Q Consensus 274 lF~~~~gEe~g~~GS~~~v~ 293 (561)
.++++..||.+..|++....
T Consensus 120 ~~~~~~~ee~~~~~~~~~~~ 139 (354)
T 2wzn_A 120 GVLPPHLRRGQEDKGSKIDW 139 (354)
T ss_dssp CCCCGGGC---------CCG
T ss_pred EEeeeeeEecccccccchhh
Confidence 67777778888888876544
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=67.03 E-value=5.2 Score=42.52 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=87.3
Q ss_pred CCCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHHHHHhcchhhhcCe-------------
Q 008568 237 LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESI------------- 303 (561)
Q Consensus 237 ~~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~~v~~~~~~~l~~I------------- 303 (561)
+..++-||=.|+.++||+.+.++ .++.++.++| +-||.|..|++--...+.+..++.|
T Consensus 229 I~s~~lDdr~~~~~~l~al~~~~--------~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~ 299 (428)
T 2ijz_A 229 IAGARLDNLLSCHAGLEALLNAE--------GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQR 299 (428)
T ss_dssp SSCCCSSCSSTTTTTTTHHHHTT--------SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTS
T ss_pred EEeecCccHHHHHHHHHHHHhcc--------cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhc
Confidence 35567788899999999987663 1246676666 9999999998843333322223333
Q ss_pred eEEEEeccccCCCCceeE--E-------eccCC--c---h---hHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCCCC
Q 008568 304 DYAICLNSVGSWNNELWI--H-------VSKPP--E---N---AYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAW 366 (561)
Q Consensus 304 ~~vlnLD~iG~~~~~l~l--h-------vs~~p--~---~---~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~s 366 (561)
.++|..|+--.. .+-|- | ..+.| + + ..-..+...+.++|++.|+..+...-+ .|....+
T Consensus 300 s~~is~Dv~ha~-~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~---~d~~gGs 375 (428)
T 2ijz_A 300 SLLVSADNAHGV-HPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTR---SDMGCGS 375 (428)
T ss_dssp CCEEEECCCCCC-CSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCC---SSCCCCC
T ss_pred CEEEEEeccccc-CCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEe---CCCCccc
Confidence 688999985432 11111 0 00111 0 0 011234555667788888777653211 1222345
Q ss_pred cccchh--cCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHH
Q 008568 367 EHEQFS--RLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFI 410 (561)
Q Consensus 367 dHe~F~--~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~ 410 (561)
|--++. +.|||++.++-. . +.-||+.-+...-|...+.
T Consensus 376 d~g~i~~~~~Gi~tvdiGip-~-----~~mHS~~E~~~~~D~~~~~ 415 (428)
T 2ijz_A 376 TIGPITASQVGVRTVDIGLP-T-----FAMHSIRELAGSHDLAHLV 415 (428)
T ss_dssp CCSTTTGGGGSCCEEEECCC-C-----CSCSSSSCCCCSSHHHHHH
T ss_pred hHHHHHHhCCCCCEEEEchh-h-----cccchHHHHhhHHHHHHHH
Confidence 555553 579999998642 1 1236777555555544433
No 58
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=65.36 E-value=3.6 Score=42.59 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=23.8
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~ 233 (561)
..|++++++|.++ +.|.|++.||+|++|.
T Consensus 45 ~GNli~~~~g~~~-----~~~~v~l~aHmD~Vg~ 73 (355)
T 3kl9_A 45 LGGIFGIKHSEAV-----DAPRVLVASHMDEVGF 73 (355)
T ss_dssp TSCEEEEECCCST-----TCCEEEEEEECCBCEE
T ss_pred CCeEEEEECCcCC-----CCCeEEEEeccccccc
Confidence 4599999988541 3689999999999996
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=63.73 E-value=26 Score=37.35 Aligned_cols=153 Identities=8% Similarity=-0.035 Sum_probs=83.2
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchH----HHHHhcch----------------
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH----KWLRSFDQ---------------- 297 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~----~~v~~~~~---------------- 297 (561)
..++-||-.|+.++||..+.+ . ++..+++++|+-||.|..|++ .|+.+.-.
T Consensus 244 ~~~~lDnr~~~~~~l~al~~~---~------~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~ 314 (450)
T 2glf_A 244 GAYGQDDRICAYTALRALLSA---N------PEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLD 314 (450)
T ss_dssp EETTHHHHHHHHHHHHHHHHC---C------CSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHH
T ss_pred EEecchhhHHHHHHHHHHHhc---C------CCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHH
Confidence 345678999999999987764 1 246789999999999988766 34333100
Q ss_pred hhhcCeeEEEEeccccCCCCceeE---------EeccCC--c---h------h--HHHHHHHHHHHHHHHhCCeeeeccc
Q 008568 298 RLRESIDYAICLNSVGSWNNELWI---------HVSKPP--E---N------A--YIKQIFEGFTNVAEELGFKVGLKHK 355 (561)
Q Consensus 298 ~~l~~I~~vlnLD~iG~~~~~l~l---------hvs~~p--~---~------~--~~~~l~~~l~~~a~~~~i~v~~~~~ 355 (561)
..+ .-.++|..|+--.. ++.|. ...+.| + + + .-..+...+.++|++.|+.++.-.-
T Consensus 315 ~~l-~~s~~iS~DvahA~-~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q~~~~ 392 (450)
T 2glf_A 315 EVL-ENTSVISGDVCAAV-NPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQVATL 392 (450)
T ss_dssp HHH-HSCEEEEECCEECC-CGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEEECCS
T ss_pred Hhh-cCCeEEEEecccCc-CCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 001 12567888875432 11110 000000 0 0 0 1134556677888888888875321
Q ss_pred -cccCCCCCCCCcccch-hcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHH
Q 008568 356 -KINISNPRVAWEHEQF-SRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFI 410 (561)
Q Consensus 356 -kin~~~~~~~sdHe~F-~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~ 410 (561)
+. +..-.++--++ ++.|||++.++-- .+.=||+.-+.+.-|...+.
T Consensus 393 gr~---d~~gGstig~i~a~~Gi~tvdiGiP------~l~MHS~~E~~~~~D~~~~~ 440 (450)
T 2glf_A 393 GKV---DQGGGGTIAKFFAERGSDVIDMGPA------LLGMHSPFEISSKADLFETY 440 (450)
T ss_dssp SST---TSCCCCCTHHHHHTTTSCEEEEECE------EBSTTSSSEEEEHHHHHHHH
T ss_pred ccC---CCCCCCcHHHHHhCCCCcEEEechh------hcccchHHHHhhHHHHHHHH
Confidence 21 11112222222 5789999998651 11226777554444444433
No 60
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=53.77 E-value=33 Score=37.15 Aligned_cols=168 Identities=10% Similarity=-0.029 Sum_probs=84.5
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchHH----HHHhc-ch------------hhh
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHK----WLRSF-DQ------------RLR 300 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~~----~v~~~-~~------------~~l 300 (561)
..++-||-.|+.+.||..+.++.........+...+ +++|+-||.|..|++- +..+. .. +.+
T Consensus 280 ~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l 358 (496)
T 3vat_A 280 FAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAI 358 (496)
T ss_dssp EETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHG
T ss_pred EeeccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHh
Confidence 456778999999999988776421000000123444 9999999999876652 22220 00 001
Q ss_pred cCeeEEEEeccccCCC----------------CceeEEeccCCchhHHHHHHHHHHHHHHHhCCeeeeccccccCCCCCC
Q 008568 301 ESIDYAICLNSVGSWN----------------NELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRV 364 (561)
Q Consensus 301 ~~I~~vlnLD~iG~~~----------------~~l~lhvs~~p~~~~~~~l~~~l~~~a~~~~i~v~~~~~kin~~~~~~ 364 (561)
. -.++|..|+--..+ ...-+-.....+...-..+...+.++|++.|+.++.-..+ .+..-
T Consensus 359 ~-~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r---~D~~g 434 (496)
T 3vat_A 359 P-KSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVR---NDSPC 434 (496)
T ss_dssp G-GCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEECCC---TTSCC
T ss_pred h-cCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEEec---CCCCC
Confidence 1 13788888742210 0001111100000011345566677888888888753211 11111
Q ss_pred CCcccch--hcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 365 AWEHEQF--SRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 365 ~sdHe~F--~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
.+.--++ ++.|||++.++-- .+.-||+.-+.+.-|++...+-.+.+
T Consensus 435 GgTig~i~~s~~Gi~tvdIGiP------~ryMHS~~E~~~~~D~~~~v~Ll~af 482 (496)
T 3vat_A 435 GTTIGPILASRLGLRVLDLGSP------QLAMHSIRETACTTGVLQTITLFKGF 482 (496)
T ss_dssp CCCHHHHHHHHHTCEEEEEECE------EESTTSSSEEEESHHHHHHHHHHHHH
T ss_pred cchHHHHHhcccCCcEEEecHh------hhccccHHHHhhHHHHHHHHHHHHHH
Confidence 2222233 3579999999651 11226777555555555544433333
No 61
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=50.92 E-value=7.9 Score=39.98 Aligned_cols=26 Identities=27% Similarity=0.523 Sum_probs=22.0
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~ 233 (561)
..|++++++|. .|.|++.||+|++|.
T Consensus 52 ~GNvi~~~~g~--------~~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 52 LGNVIAHFKGS--------SPRIMVAAHMDKIGV 77 (354)
T ss_dssp TCCEEEEECCS--------SSEEEEECCCCBCEE
T ss_pred CCeEEEEEcCC--------CCEEEEEecccccce
Confidence 46999999872 269999999999996
No 62
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=44.01 E-value=13 Score=38.32 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=21.2
Q ss_pred cceEEEEecCCCCCCCCCCCCEEEEEeccCCCCC
Q 008568 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (561)
Q Consensus 200 ~~NV~g~L~G~~~~~~~~~~~~IvI~AHyDs~g~ 233 (561)
..||++++ |. +.|.|++.||+|++|.
T Consensus 53 ~Gnvi~~~-g~-------~~~~v~l~aHmDevG~ 78 (343)
T 3isx_A 53 LGNLIVWK-GS-------GEKKVILDAHIDEIGV 78 (343)
T ss_dssp TCCEEEEE-CC-------CSSEEEEEEECCBCEE
T ss_pred CCCEEEEE-CC-------CCCEEEEEecccccce
Confidence 46899988 42 2579999999999996
No 63
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=38.07 E-value=1.1e+02 Score=24.10 Aligned_cols=77 Identities=16% Similarity=0.218 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhCCeeeeccccccCCCCCCCCcccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHH
Q 008568 335 IFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVK 414 (561)
Q Consensus 335 l~~~l~~~a~~~~i~v~~~~~kin~~~~~~~sdHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~ 414 (561)
+++.+.++.++.|...... . ....+|-..|...|+|++.+.-.....+ .-|+.. |.|+.+.|.+.++
T Consensus 3 ~v~~l~~a~~~~g~~~~~~--~-----~~g~TDar~~~~~gip~v~fGPg~~~~~---~~H~~d---E~v~i~~l~~~~~ 69 (88)
T 1q7l_B 3 WWAAFSRVCKDMNLTLEPE--I-----MPAAGDNRYIRAVGVPALGFSPMNRTPV---LLHDHD---ERLHEAVFLRGVD 69 (88)
T ss_dssp HHHHHHHHHHHTTCCEEEE--E-----CCSCSHHHHHHHTTCCEEEECCCCSCCC---CTTSTT---CEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEee--e-----eceeCcHHHHHHcCCCEEEECCCCCCcc---cccCCC---CeeEHHHHHHHHH
Confidence 4455555555545444321 1 1124566667778999999875432111 113333 8899999999888
Q ss_pred HHHHHHHHHH
Q 008568 415 LVAESLARHI 424 (561)
Q Consensus 415 ~vaeaLa~~i 424 (561)
..++.+.++.
T Consensus 70 iy~~~i~~~~ 79 (88)
T 1q7l_B 70 IYTRLLPALA 79 (88)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777764
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=36.80 E-value=11 Score=40.47 Aligned_cols=159 Identities=8% Similarity=0.033 Sum_probs=79.7
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchH----HHHHhcchhh----h-cCe-e---
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH----KWLRSFDQRL----R-ESI-D--- 304 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~----~~v~~~~~~~----l-~~I-~--- 304 (561)
..++-||-.|+.++|++.+.++. .+++.+++++++-||.|..|++ .|+++.-.+. + ... .
T Consensus 250 ~s~~lDdr~~~~~~l~al~~~~~-------~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~ 322 (458)
T 1y7e_A 250 GAYGQDDKICVFTSLESIFDLEE-------TPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHV 322 (458)
T ss_dssp EESSHHHHHHHHHHHHHHSSSSC-------CCSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHH
T ss_pred EEecCccHHHHHHHHHHHHhhhc-------cCCceEEEEEEcccccCcccchhhccchHHHHHHHHHHhhccCCcchHHH
Confidence 34566888999999998664421 3567899999999999998876 4444411111 1 111 3
Q ss_pred -------EEEEeccccCCCCceeE-----------------E-e--ccCCchh--HHHHHHHHHHHHHHHhCCeeeeccc
Q 008568 305 -------YAICLNSVGSWNNELWI-----------------H-V--SKPPENA--YIKQIFEGFTNVAEELGFKVGLKHK 355 (561)
Q Consensus 305 -------~vlnLD~iG~~~~~l~l-----------------h-v--s~~p~~~--~~~~l~~~l~~~a~~~~i~v~~~~~ 355 (561)
++|..|+--.. ++.|. - . +..+..+ .-..+...+.++|++.|++.+...-
T Consensus 323 ~~~~~~S~~is~Dv~ha~-dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~~~~~~~~l~~~a~~~~Ip~Q~~~~ 401 (458)
T 1y7e_A 323 QKALWNSKSISADVCAAI-NPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATL 401 (458)
T ss_dssp HHHHHHCEEEECCCEECC-CC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHhcceEEEEeccccc-CCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 78888885332 21111 1 0 1110000 0134566777888888888775321
Q ss_pred -cccCCCCCCCC-cccchhcCCCeEEEEeccCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 008568 356 -KINISNPRVAW-EHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (561)
Q Consensus 356 -kin~~~~~~~s-dHe~F~~~gIPAvtls~~~~~~d~~~~r~si~Dt~d~id~~~L~~~~~~v 416 (561)
+. +....+ .--..+..|||++.+.-. .+.-||+. +.++.+.+...++++
T Consensus 402 ~r~---d~~~GgT~~~~~a~~Gi~tvdiGiP------~~~mHS~~---E~~~~~Di~~~~~ll 452 (458)
T 1y7e_A 402 GKV---EEGGGGTVAKFLAGYGIRTIDMGPA------VISMHSPM---EITSKFDLYNAYLAY 452 (458)
T ss_dssp CC--------CHHHHHHHHHHTCEEEEECCE------EBSTTSSS---EEEEHHHHHHHHHHH
T ss_pred ecc---CCCCcCcHHHHHhCCCCCEEEEchh------hcccchHH---HHhhHHHHHHHHHHH
Confidence 11 101111 222236789999998641 11236766 444555554444433
No 65
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=26.70 E-value=29 Score=37.11 Aligned_cols=44 Identities=7% Similarity=-0.071 Sum_probs=35.2
Q ss_pred CCCccchhHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEeCCCCCCCcchH
Q 008568 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH 289 (561)
Q Consensus 238 ~~GAdDNaSGvaaLLELAR~fs~l~~~~~~~~~~nIlF~~~~gEe~g~~GS~ 289 (561)
..++-||-.|+.++|++.+.++ .+++.+++++|+-||.|..|++
T Consensus 256 ~s~~lDdr~~~~~~l~al~~~~--------~~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 256 MGYGQDDRICAYTSFEAMLEMK--------NAKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp EETTHHHHHHHHHHHHHHHTCC--------SCSSCEEEEEECCGGGTCCTTT
T ss_pred EEecchhHHHHHHHHHHHHhhc--------cCCCeEEEEEEccCCCCCcccc
Confidence 4466789999999999976542 2467899999999999998875
No 66
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=24.76 E-value=38 Score=34.63 Aligned_cols=31 Identities=19% Similarity=0.408 Sum_probs=14.5
Q ss_pred HHHHHHHh-cccchHHHHHHhcCCCCCcccCC
Q 008568 531 VLFSFLVI-TTRGLDDLISLFRRPPSRKVKTA 561 (561)
Q Consensus 531 ~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 561 (561)
.+|+++.= ++|.+|||=.+|++..+|++|++
T Consensus 458 ~~~~~~PETkg~tLeei~~~f~~~~~~~~~~~ 489 (491)
T 4gc0_A 458 FMWKFVPETKGKTLEELEALWEPETKKTQQTA 489 (491)
T ss_dssp HHHHHCCCCTTCCHHHHGGGTC----------
T ss_pred HHHheecCCCCCCHHHHHHHhCCCCcccccCC
Confidence 34444443 34599999999988776666653
Done!