Citrus Sinensis ID: 008568

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-

MAHRKARERDMLDSVYSMLALVFILVACVELCDAATVVDVYRLIQYDISGVPFGSRLASLNHHAGSLHFSPGADLSRTVVMIPVRELNISFVTEYVSRKHPLGGMLFLLPEIFRLENGGGGKDVREKEVVKNVLLELEKLLVHAKLPYPVYFAFENDEIDAVLDDVKKNDATGQPATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGKNIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISKNDPFIMALKKELADHTDEVIMQHEVLDGMFTFYDSTKASLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA

cccccHHcHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEECccccHHHHHHHHcccccccccccEECccEEEEEEccccccccccccccEEEEEcccccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccCEEEEEEEcccccccccHHHHHHHcccccccccEEEEEccccccccccccEEEcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcEEEEccEEEEcccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccc

***********LDSVYSMLALVFILVACVELCDAATVVDVYRLIQYDISGVPFGSRLASLNHHAGSLHFSPGADLSRTVVMIPVRELNISFVTEYVSRKHPLGGMLFLLPEIFRLE******DVREKEVVKNVLLELEKLLVHAKLPYPVYFAFENDEIDAVLDDVKKND****PATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGKNIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISKNDPFIMALKKELADHTDEVIMQHEVLDGMFTFYDSTKASLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLF***********

xxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxx

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Nicalin-1	Antagonizes Nodal signaling and subsequent organization of axial structures during mesodermal patterning. Ectopic expression results in cyclopia, due to a defect in mesendoderm patterning.	probable	Q6NZ07
Nicalin	May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.	probable	Q969V3
Nicalin	May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.	probable	Q5XIA1

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2EK8, chain A
Confidence level:confident
Coverage over the Query: 74-118,133-430
View the alignment between query and template
View the model in PyMOL

Template: 3KAS, chain A
Confidence level:confident
Coverage over the Query: 146-431
View the alignment between query and template
View the model in PyMOL