Your job contains 1 sequence.
>008573
MKPEADLESDRKAMPEIEAAVDGDGDSNRSFNESNSTTQKAETTNKKQNDDAEGEEEKEQ
KMKPEPDVENDPVQNRTESGPDREDRDWSSNGKLNENGNGTGNVKEETDEDNDKTASEGK
VESVKNKTSAVGGLSESNELWDESKREGKQSSDVQSSASLSRNKRRRSGEEPYDEEVSPA
TKKVLAVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSRLDRG
LYSNCFQKFFRDLLLLFNNFVIFFRKSSQEYAAAQELRTLVIKEMTDMLRKQQPIAVTKP
KPKPKPEHHRQQPQPPPASLSKPNRGSTMVVCGKRSSIKAISKNAYGKKGDRKDREVEEK
PKVNEKKVDSSFVGIEDKGIKKKRSQERSVSLRRNSRSSSRSGDVKHQFGGNELSSHDTL
EAKTENKKENAVKKKKLGAASFLKRMKQNSPSEVMEDDDEEEDENDNDNDDDDSGDDSKD
SKVEEEKKRRSVTRRDVNRVTRSSRGRGVREENRRRGVGRPPKRSASGAMSPPEKTSGKR
GRDNGESEVGGGGRSRKRTRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008573
(561 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101477 - symbol:AT3G60110 species:3702 "Arabi... 231 3.6e-18 3
TAIR|locus:2050574 - symbol:AT2G44430 species:3702 "Arabi... 243 6.0e-18 1
TAIR|locus:2095878 - symbol:AT3G57980 species:3702 "Arabi... 227 4.2e-17 2
TAIR|locus:2060040 - symbol:AT2G42150 species:3702 "Arabi... 220 1.3e-15 2
TAIR|locus:1006230673 - symbol:BRD4 "AT1G61215" species:3... 137 6.6e-06 2
>TAIR|locus:2101477 [details] [associations]
symbol:AT3G60110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002686 GO:GO:0003677
GO:GO:0003682 SUPFAM:SSF46689 Gene3D:1.20.920.10 SUPFAM:SSF47370
ProtClustDB:CLSN2718100 EMBL:AY056393 EMBL:BT000519 IPI:IPI00538592
RefSeq:NP_567092.4 UniGene:At.26330 ProteinModelPortal:Q93ZQ2
SMR:Q93ZQ2 PRIDE:Q93ZQ2 EnsemblPlants:AT3G60110.1 GeneID:825181
KEGG:ath:AT3G60110 TAIR:At3g60110 OMA:RRTSKEI PhylomeDB:Q93ZQ2
Genevestigator:Q93ZQ2 Uniprot:Q93ZQ2
Length = 641
Score = 231 (86.4 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 73/229 (31%), Positives = 108/229 (47%)
Query: 66 PDVEND---PVQ-NRTESGPDREDRDWSSNGKLNENGNGTGNVKEETDEDN---DKTASE 118
PD++ND PV+ NR + DR+D N +NE+ N T +V + D D DK
Sbjct: 177 PDLKNDETKPVRVNRETTESDRDD-----NRSMNES-NSTASVDKIADHDRLDGDKMVKA 230
Query: 119 GKVESVKNKTSAVGGLSESNELWDE--SKREGKQXXXXXXXXXXXRNKRRRSGEEPYDEE 176
E+ +N +E+ E + SKR +R G++ Y
Sbjct: 231 N--ENSRNPDPDPVNKAETPEEEERTVSKRSEMSNSGELDESGTSNCLGKRKGQK-YRSG 287
Query: 177 VSPATKKVLAVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSR 236
K KS+PL+ + +IRSH S FE RLRSQ+++ YK+L+RQH+D++TI+ +
Sbjct: 288 GGGGGVKSAGDKSQPLIDIIKLIRSHPRGSVFESRLRSQDTKDYKRLIRQHLDMKTIEKK 347
Query: 237 LDRGLYSNCFQKXXXXXXXXXXXXXXXXRKSSQEYAAAQELRTLVIKEM 285
+++G Y + SS E AAQELRTLV EM
Sbjct: 348 MEKGSYVSSSLSFYRDLKLLFTNAIVFFPTSSSESIAAQELRTLVSNEM 396
Score = 49 (22.3 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 440 ASFLKRMKQNSPSE 453
A FLKR+K+NSP +
Sbjct: 533 ADFLKRIKKNSPQK 546
Score = 41 (19.5 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1 MKPEADLESDRKAMPEIEAAVDGDGDSNRSFNE 33
M + D + + E + GDGD N + N+
Sbjct: 15 MNDDDDTNNINNSSTEFDNNRIGDGDDNSNLNQ 47
>TAIR|locus:2050574 [details] [associations]
symbol:AT2G44430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR017877
PROSITE:PS50090 EMBL:AC004521 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 EMBL:AY120707 EMBL:BT009664 IPI:IPI00538687
PIR:T02398 RefSeq:NP_181971.1 UniGene:At.43353
ProteinModelPortal:O64877 SMR:O64877 PRIDE:O64877
EnsemblPlants:AT2G44430.1 GeneID:819050 KEGG:ath:AT2G44430
TAIR:At2g44430 eggNOG:NOG318143 InParanoid:O64877 OMA:PIIVCRK
PhylomeDB:O64877 ArrayExpress:O64877 Genevestigator:O64877
Uniprot:O64877
Length = 646
Score = 243 (90.6 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 94/317 (29%), Positives = 137/317 (43%)
Query: 66 PDVENDPVQNRTES-GPDREDRDWS---------SNGKLNE-NGNGTGNVKE-------- 106
PD+EN+ + R+E+ G + E R+ + N +NE N T +E
Sbjct: 176 PDLENERKEERSENDGSESEHREKAVSAAEESDRENRSMNESNSTATAGEEERVCGDEPS 235
Query: 107 ETDED---NDKTASEGKVESVKNKTSAV---GGLSESNELWDESKREGKQXXXXXXXXXX 160
+T ED NDK V K+ T+A G +S +E S G+
Sbjct: 236 QTREDDSGNDKNPDPDPVN--KDATAAEEEEGSVSRGSEA-SHSDELGESGTSESKW--- 289
Query: 161 XRNKRRRSGEEPYDEEVSPATKKVLAVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERY 220
+ KRR+ G E+ A K S+PL+ L +IRSH S FERRLRSQE++ Y
Sbjct: 290 -KRKRRKQGGAG---EIRSAESK-----SQPLISLLDLIRSHPRGSLFERRLRSQEAKDY 340
Query: 221 KKLVRQHIDLRTIQSRLDRGLYSNCFQKXXXXXXXXXXXXXXXXRKSSQEYAAAQELRTL 280
K +V+QH+D+ TIQ +L +G Y + SS E AA ELR +
Sbjct: 341 KSMVKQHLDIETIQRKLKQGSYDSSSLIFYRDLQLLFTNAIVFFPLSSSESMAAHELRAV 400
Query: 281 VIKEMTDMLRKQQPIAVTXXXXXXXXXXXXXXXXXXXASLSKPNRGSTMVVCGKRSSIKA 340
V +EM K P + +SLS+ +VVC KR S+ A
Sbjct: 401 VSQEMRKETGKAGPRLIKQEASGMRSGKADAETSD--SSLSRQKSSGPLVVCKKRRSVSA 458
Query: 341 I---SKNAYGKKGDRKD 354
S +++ +K D K+
Sbjct: 459 KASPSSSSFSQKDDTKE 475
>TAIR|locus:2095878 [details] [associations]
symbol:AT3G57980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487 Pfam:PF00249
Pfam:PF00439 PROSITE:PS50014 SMART:SM00297 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
InterPro:IPR017930 PROSITE:PS51294 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL132977 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 IPI:IPI00525752 PIR:T46020
RefSeq:NP_191357.1 UniGene:At.28706 ProteinModelPortal:Q9M2Q0
SMR:Q9M2Q0 PRIDE:Q9M2Q0 EnsemblPlants:AT3G57980.1 GeneID:824967
KEGG:ath:AT3G57980 TAIR:At3g57980 InParanoid:Q9M2Q0 OMA:ESMDESK
PhylomeDB:Q9M2Q0 Genevestigator:Q9M2Q0 Uniprot:Q9M2Q0
Length = 632
Score = 227 (85.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 83/340 (24%), Positives = 135/340 (39%)
Query: 24 DGDSNRSFNESNSTTQKAETTNKKQNDDAXXXXXXXXXXXXXPDVENDPVQNRTESGPDR 83
+ + +S NS + T + + PD ND N +G +
Sbjct: 109 EDEREKSLKTENSDLDRIAETKENHTESGNNSGVPVTELKNSPD-PND---NSPGTGSEN 164
Query: 84 EDRDWSSNGKLNENGNGTGNVKEETDEDNDKTAS-EGKVESVKNKTSAVGGLSESN---- 138
+R ++E N G E+ DE + S G ESV ++ E N
Sbjct: 165 TNRAVKIAEPVDEEPNRIGG--EDNDEKPAREDSGRGSCESVAKESDRAEPKREGNDSPE 222
Query: 139 --ELWDESK-REGKQXXXXXXXXXXXRNKRRRSGEEPYDEEVSPATKKVLAVKSEPLVRF 195
E DESK E + K ++P +++ S K+ V+S+PL F
Sbjct: 223 LVESMDESKGEEDTKETSDGQSSASFPRKETVDQDQPDNKDQSLTVNKIF-VESQPLSDF 281
Query: 196 LGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSRLDRGLYSNCFQKXXXXXXX 255
+ +++SH + SHF RRL +QE+ Y +++RQHID I+SR++ G Y K
Sbjct: 282 IEILQSHPIGSHFSRRLETQETSDYYRIIRQHIDFEMIRSRVEEGYYKTARTKFFRDLLL 341
Query: 256 XXXXXXXXXRKSSQEYAAAQELRTLVIKEMTDMLRKQQPIAVTXXXXXXXXXXXXXXXXX 315
+ S E+ AA++L L+ K+M+ + KQ
Sbjct: 342 LINNVRVFYGEPSPEFNAAKQLYQLIKKQMSFKIPKQ------TLPPPKEDALVTSKEEV 395
Query: 316 XXASLSKPNRGSTMVVCGKRSSIKAISKNAYGKKGDRKDR 355
+SL KP ++ C KRSS+ S + + +K R
Sbjct: 396 KVSSL-KPTLSVPIIACRKRSSLAVRSPASVTETLKKKTR 434
Score = 50 (22.7 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 439 AASFLKRMKQNSPSEVM 455
AASFLKRMK S SE +
Sbjct: 524 AASFLKRMKGVSSSETV 540
>TAIR|locus:2060040 [details] [associations]
symbol:AT2G42150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 EMBL:AC002561
Gene3D:1.20.920.10 SUPFAM:SSF47370 UniGene:At.42743
UniGene:At.42745 IPI:IPI00537143 PIR:T00925 RefSeq:NP_181745.1
ProteinModelPortal:O48523 SMR:O48523 PaxDb:O48523 PRIDE:O48523
EnsemblPlants:AT2G42150.1 GeneID:818815 KEGG:ath:AT2G42150
TAIR:At2g42150 eggNOG:NOG244537 HOGENOM:HOG000242892
InParanoid:O48523 OMA:LMNETIS PhylomeDB:O48523
ProtClustDB:CLSN2718100 ArrayExpress:O48523 Genevestigator:O48523
Uniprot:O48523
Length = 631
Score = 220 (82.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 71/278 (25%), Positives = 121/278 (43%)
Query: 68 VENDPVQNRTES-GPDREDRDWSSNGKLNENGNGTGNVKEE-TDEDNDKTASEGKVESVK 125
V N PVQ E+ PD ++ S N + E G+G + + ED+ + + E +
Sbjct: 153 VPNPPVQLMNETISPDPKEIG-SENTEREEEMAGSGGGESKLAGEDSCRGSCESVEKEPT 211
Query: 126 NKTSAVGGLSESNELWDESKREGKQXXXXXXXXXXXRNKRRRSGEEPYDEEVSPATKKVL 185
+ V +S + + ES+ + + R+ EP E+ SP + K
Sbjct: 212 TNSERVEPVSVTELI--ESEDGASRGEEITSDVQSSASLPRKGTSEPDKEDQSPTSAKDF 269
Query: 186 AVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSRLDRGLYSNC 245
V+S+PL+ F+ ++ SH SHF RRL QE+ Y ++R+H+D I+ R++ GLY +
Sbjct: 270 TVESQPLISFVEILLSHPCGSHFSRRLERQETIEYGTIIREHVDFEIIRKRVEGGLYKSW 329
Query: 246 FQKXXXXXXXXXXXXXXXXRKSSQEYAAAQELRTLVIKEMTDMLR---KQQPIAVTXXXX 302
+ S E+ A++L LV K+MT L+ + I+++
Sbjct: 330 RINFFRDLLLLVNNARVFYHRGSSEFKFAEQLHQLVKKQMTTTLKGLSNRDEISISPPKE 389
Query: 303 XXXXXXXXXXXXXXXASLSKPNRGSTMVVCGKRSSIKA 340
+S PN +V C KRS++ A
Sbjct: 390 EVVAIPSSKPVSSK-PRMSVPN----IVACRKRSALAA 422
Score = 44 (20.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 439 AASFLKRMKQNSPSEVM 455
AASFL+RMK S + +
Sbjct: 519 AASFLRRMKVGSSDDTL 535
>TAIR|locus:1006230673 [details] [associations]
symbol:BRD4 "AT1G61215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:BT015126 EMBL:BT015908
IPI:IPI00533894 RefSeq:NP_974063.1 UniGene:At.49477
ProteinModelPortal:Q6AWX2 SMR:Q6AWX2 STRING:Q6AWX2 PRIDE:Q6AWX2
EnsemblPlants:AT1G61215.1 GeneID:2745841 KEGG:ath:AT1G61215
TAIR:At1g61215 InParanoid:Q6AWX2 OMA:ESNDECH PhylomeDB:Q6AWX2
ProtClustDB:CLSN2681296 Genevestigator:Q6AWX2 Uniprot:Q6AWX2
Length = 475
Score = 137 (53.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 185 LAVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSRLDRGLYSN 244
LA+ E L++ I + + F RRL SQ+ RYKKLVR+H+DL T+QSR++ G +
Sbjct: 263 LALPKE-LMKIYNTIAQNECALVFRRRLDSQKRGRYKKLVRRHMDLDTVQSRIN-GCSIS 320
Query: 245 CFQKXXXXXXXXXXXXXXXXRKSSQEYAAAQELRTLVIKEMTDMLRKQQP 294
++ K+++EY +A LR +V K + L + P
Sbjct: 321 SAKELFRDFLLVANNAAIFYSKNTREYKSAVGLRDIVTKSLRHYLTEDHP 370
Score = 39 (18.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 338 IKAISKNAYGKKGD--RKD 354
+ A+ +A GKKG RKD
Sbjct: 435 VSAVKSSAAGKKGTAVRKD 453
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.306 0.124 0.335 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 561 378 0.00089 117 3 11 23 0.40 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 605 (64 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.09u 0.17s 35.26t Elapsed: 00:00:02
Total cpu time: 35.09u 0.17s 35.26t Elapsed: 00:00:02
Start: Tue May 21 10:41:38 2013 End: Tue May 21 10:41:40 2013