Your job contains 1 sequence.
>008574
MKQHQELSKTNNMSHSTAATTTFRLRANSKTRESPKQEAGINGVSLSPELKARAKSVPAD
VKTNNISKSRRALILNKPKSAEGAVGSHKDDEVKVFGRSLNRPVVEQFARPRRQRIVDAN
PGKIEDGLMDKKKKEFEEKLMLSENLVKDLQSEVFALKAEFVKAQSLNAELEKQNKKLVE
DLVAAEAKIASLSSREQREAVGEYQSPKFKDVQKLIANKLEHSIVMTDAISETSINTPPS
EPKIPIRNAAGVERKPQAYPSMPAPLPPPPPPRPPARAAATQKTPSFAQLYHSLTKQVEK
KDLPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAIKADIETKGGFINSLIQKVLAAAYTN
IEDLLEFVDWLDKELSSLADERAVLKHFKWPEKKADAMREAAVEYRDLKQLENEISSYRD
DTNVPFGAALKKMASLLDKSERSIQRLVKLRNSVMHSYKDCKIPVDWMLDSGIISKIKQA
SMKLAQMYMKRVTRELELVHNSDRESTQEALLLQGLHFAYRAHQFVGGLDSETLCAFEEI
RQRVPQHLGGSHKLLAGISSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008574
(561 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007755 - symbol:AT1G48280 "AT1G48280" species... 943 8.2e-123 2
TAIR|locus:2102385 - symbol:CHUP1 "CHLOROPLAST UNUSUAL PO... 704 5.9e-77 3
TAIR|locus:2831359 - symbol:AT4G18570 species:3702 "Arabi... 635 5.4e-65 2
TAIR|locus:2007477 - symbol:AT1G07120 "AT1G07120" species... 560 2.3e-58 2
>TAIR|locus:2007755 [details] [associations]
symbol:AT1G48280 "AT1G48280" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] EMBL:CP002684 EMBL:AC007932
IPI:IPI00530542 PIR:G96522 RefSeq:NP_564524.1 UniGene:At.26293
PRIDE:Q9SX62 EnsemblPlants:AT1G48280.1 GeneID:841248
KEGG:ath:AT1G48280 TAIR:At1g48280 HOGENOM:HOG000153560
InParanoid:Q9SX62 OMA:GEIQNRS PhylomeDB:Q9SX62
ProtClustDB:CLSN2721717 Genevestigator:Q9SX62 Uniprot:Q9SX62
Length = 558
Score = 943 (337.0 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 183/276 (66%), Positives = 224/276 (81%)
Query: 282 QKTPSFAQLYHSLTKQVEKKDLPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAIKADIET 341
QK+P +QL+ L KQ ++L VN + V+ AH+SIVGEIQNRSAHL+AIKADIET
Sbjct: 280 QKSPPVSQLFQLLNKQDNSRNLSQSVNGNKSQVNSAHNSIVGEIQNRSAHLIAIKADIET 339
Query: 342 KGGFINSLIQKVLAAAYTNIEDLLEFVDWLDKELSSLADERAVLKHFKWPEKKADAMREA 401
KG FIN LIQKVL ++++ED+++FVDWLDKEL++LADERAVLKHFKWPEKKAD ++EA
Sbjct: 340 KGEFINDLIQKVLTTCFSDMEDVMKFVDWLDKELATLADERAVLKHFKWPEKKADTLQEA 399
Query: 402 AVEYRDLKQLENEISSYRDDTNVPFGAALKKMASLLDKSERSIQRLVKLRNSVMHSYKDC 461
AVEYR+LK+LE E+SSY DD N+ +G ALKKMA+LLDKSE+ I+RLV+LR S M SY+D
Sbjct: 400 AVEYRELKKLEKELSSYSDDPNIHYGVALKKMANLLDKSEQRIRRLVRLRGSSMRSYQDF 459
Query: 462 KIPVDWMLDSGIISKIKQASMKLAQMYMKRVTRELELVHNSDRESTQEALLLQGLHFAYR 521
KIPV+WMLDSG+I KIK+AS+KLA+ YM RV EL+ N DREST+EALLLQG+ FAYR
Sbjct: 460 KIPVEWMLDSGMICKIKRASIKLAKTYMNRVANELQSARNLDRESTKEALLLQGVRFAYR 519
Query: 522 AHQFVGGLDSETLCAFEEIRQRVPQHLGGSHKLLAG 557
HQF GGLD ETLCA EEI+QRVP HL + +AG
Sbjct: 520 THQFAGGLDPETLCALEEIKQRVPSHLRLARGNMAG 555
Score = 285 (105.4 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 93/234 (39%), Positives = 131/234 (55%)
Query: 16 STAATTTFRLRA-NSKTRESPKQEA-GINGVSLSPELKARAKSVPADVKTNNISKSRRAL 73
ST +TT R+RA NS K A NG++ + KS DVK N+ +K RR++
Sbjct: 5 STTSTTPSRVRAANSHYSVISKPRAQDDNGLT-----GGKPKSSGYDVK-NDPAK-RRSI 57
Query: 74 ILNKPKSAEGAVGSHKDDEVKVFGRSLNRP-VVEQFARPRR------QRIVDANPGKIED 126
+L + KSAE + RS+NRP VVEQF PRR + V A ED
Sbjct: 58 LLKRAKSAEEEMAVLAPQRA----RSVNRPAVVEQFGCPRRPISRKSEETVMATAAA-ED 112
Query: 127 GLMDXXXXXXXXXLMLSENLVKDLQSEVFALKAEFVKAQSLNAELEKQNKKLVEDLVAAE 186
L+++E+L+KDLQ +V LK E +A++ N ELE N+KL +DLV+AE
Sbjct: 113 EKRKRMEELEEK-LVVNESLIKDLQLQVLNLKTELEEARNSNVELELNNRKLSQDLVSAE 171
Query: 187 AKIASLSSREQREAVGEYQSPKFKDVQKLIANKLEHSIVMTDAISETSINTPPS 240
AKI+SLSS ++ E+Q+ +FKD+Q+LIA+KLE V + E+S +PPS
Sbjct: 172 AKISSLSSNDK--PAKEHQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPS 223
>TAIR|locus:2102385 [details] [associations]
symbol:CHUP1 "CHLOROPLAST UNUSUAL POSITIONING 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009707
"chloroplast outer membrane" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA;IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP001313 GO:GO:0009707
EMBL:AB087408 IPI:IPI00541711 RefSeq:NP_001189974.1
RefSeq:NP_189197.2 UniGene:At.27741 ProteinModelPortal:Q9LI74
STRING:Q9LI74 PaxDb:Q9LI74 PRIDE:Q9LI74 EnsemblPlants:AT3G25690.1
EnsemblPlants:AT3G25690.2 GeneID:822157 KEGG:ath:AT3G25690
TAIR:At3g25690 eggNOG:NOG310144 HOGENOM:HOG000242560
InParanoid:Q9LI74 OMA:ELRNYQT PhylomeDB:Q9LI74
ProtClustDB:CLSN2680868 Genevestigator:Q9LI74 GO:GO:0009902
Uniprot:Q9LI74
Length = 1004
Score = 704 (252.9 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 136/271 (50%), Positives = 193/271 (71%)
Query: 283 KTPSFAQLYHSLTKQVEKKD-LPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAIKADIET 341
+ P + Y SL K+ KK+ PS ++ S A ++++GEI+NRS LLA+KAD+ET
Sbjct: 720 RAPELVEFYQSLMKRESKKEGAPSLISSGTGNSSAARNNMIGEIENRSTFLLAVKADVET 779
Query: 342 KGGFINSLIQKVLAAAYTNIEDLLEFVDWLDKELSSLADERAVLKHFKWPEKKADAMREA 401
+G F+ SL +V A+++T+IEDLL FV WLD+ELS L DERAVLKHF WPE KADA+REA
Sbjct: 780 QGDFVQSLATEVRASSFTDIEDLLAFVSWLDEELSFLVDERAVLKHFDWPEGKADALREA 839
Query: 402 AVEYRDLKQLENEISSYRDDTNVPFGAALKKMASLLDKSERSIQRLVKLRNSVMHSYKDC 461
A EY+DL +LE +++S+ DD N+ ALKKM LL+K E+S+ L++ R+ + YK+
Sbjct: 840 AFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMYKLLEKVEQSVYALLRTRDMAISRYKEF 899
Query: 462 KIPVDWMLDSGIISKIKQASMKLAQMYMKRVTRELELVHNSDRESTQEALLLQGLHFAYR 521
IPVDW+ D+G++ KIK +S++LA+ YMKRV EL+ V SD++ +E LLLQG+ FA+R
Sbjct: 900 GIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAFR 959
Query: 522 AHQFVGGLDSETLCAFEEIRQRVPQHLGGSH 552
HQF GG D+E++ AFEE+R R G ++
Sbjct: 960 VHQFAGGFDAESMKAFEELRSRAKTESGDNN 990
Score = 70 (29.7 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 36 KQEAGINGVSLSPELKARAKSVPA-DVKTNNISKSRRALILNKPKSAEGAVGSHKDDEVK 94
+QE+ I V L +LK + + ++ N++ R+ L + S G V K+ EV
Sbjct: 160 EQESDI--VELQRQLKIKTVEIDMLNITINSLQAERKKL--QEELSQNGIV--RKELEVA 213
Query: 95 VFGRSLNRPVVEQFARPRRQRIVDANPGKIEDGLMDXXXXXXXXXLMLSENLVKDLQSE- 153
R +++ +RQ +DAN K + L+ + E + KD + E
Sbjct: 214 -------RNKIKEL---QRQIQLDANQTKGQ--LLLLKQHVSSLQMKEEEAMNKDTEVER 261
Query: 154 ----VFALKAEFVKAQSLNAELEKQNKKLVEDLVAAEAKIASLSSREQREAVGE 203
V L+ + ++ + N EL+ + ++L L +AEA+IA+LS+ + + V +
Sbjct: 262 KLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAK 315
Score = 43 (20.2 bits), Expect = 1.0e-71, Sum P(2) = 1.0e-71
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 229 AISETSINTPPSEPKIPIRNAAGVERK 255
A++ +N PS+P P N G +++
Sbjct: 15 AVTVKRLNVKPSKPSKPSDNGEGGDKE 41
Score = 37 (18.1 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 238 PPSEPKIPIRNAAG 251
PP P+ P R+A G
Sbjct: 648 PPRVPRPPPRSAGG 661
>TAIR|locus:2831359 [details] [associations]
symbol:AT4G18570 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002687 EMBL:AY128285
EMBL:BT004523 IPI:IPI00524553 RefSeq:NP_193591.2 UniGene:At.23905
UniGene:At.70231 ProteinModelPortal:Q8L7S5 PRIDE:Q8L7S5
EnsemblPlants:AT4G18570.1 GeneID:827588 KEGG:ath:AT4G18570
TAIR:At4g18570 HOGENOM:HOG000070980 InParanoid:Q8L7S5 OMA:FEWPEQK
PhylomeDB:Q8L7S5 ProtClustDB:CLSN2918131 Genevestigator:Q8L7S5
Uniprot:Q8L7S5
Length = 642
Score = 635 (228.6 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 131/268 (48%), Positives = 185/268 (69%)
Query: 282 QKTPSFAQLYHSLTKQVE---KKDLPSPVNQKRPAVSIAHSS---IVGEIQNRSAHLLAI 335
++ P + YHSL ++ ++D N A+ +A+S+ ++GEI+NRS +LLAI
Sbjct: 354 RRVPEVVEFYHSLMRRDSTNSRRDSTGGGNAAAEAI-LANSNARDMIGEIENRSVYLLAI 412
Query: 336 KADIETKGGFINSLIQKVLAAAYTNIEDLLEFVDWLDKELSSLADERAVLKHFKWPEKKA 395
K D+ET+G FI LI++V AA+++IED++ FV WLD ELS L DERAVLKHF+WPE+KA
Sbjct: 413 KTDVETQGDFIRFLIKEVGNAAFSDIEDVVPFVKWLDDELSYLVDERAVLKHFEWPEQKA 472
Query: 396 DAMREAAVEYRDLKQLENEISSYRDDTNVPFGAALKKMASLLDKSERSIQRLVKLRNSVM 455
DA+REAA Y DLK+L +E S +R+D +ALKKM +L +K E + L ++R S
Sbjct: 473 DALREAAFCYFDLKKLISEASRFREDPRQSSSSALKKMQALFEKLEHGVYSLSRMRESAA 532
Query: 456 HSYKDCKIPVDWMLDSGIISKIKQASMKLAQMYMKRVTRELELVHNSDRESTQEALLLQG 515
+K +IPVDWML++GI S+IK AS+KLA YMKRV+ ELE + E +E L++QG
Sbjct: 533 TKFKSFQIPVDWMLETGITSQIKLASVKLAMKYMKRVSAELEAIEGGGPE--EEELIVQG 590
Query: 516 LHFAYRAHQFVGGLDSETLCAFEEIRQR 543
+ FA+R HQF GG D+ET+ AFEE+R +
Sbjct: 591 VRFAFRVHQFAGGFDAETMKAFEELRDK 618
Score = 45 (20.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 140 LMLSENL-VKDLQSEVFA---LKAEFVKAQSLNAELEKQNKKLVEDLVAAEAKI-ASLSS 194
L+ +ENL VK L+ V L+++ EL K+ +L ED + S
Sbjct: 103 LLKTENLEVKLLRESVSVIPLLESQIADKNGEIDELRKETARLAEDNERLRREFDRSEEM 162
Query: 195 REQREAVGEYQSPKFKDVQKLIANKLE-HSI 224
R + E + + +++KL++++ + H++
Sbjct: 163 RRECETREKEMEAEIVELRKLVSSESDDHAL 193
Score = 37 (18.1 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 291 YHSLTKQVEKKDLPSPV 307
+H + KD+PSP+
Sbjct: 12 FHKSPSTKKTKDMPSPL 28
>TAIR|locus:2007477 [details] [associations]
symbol:AT1G07120 "AT1G07120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009941 "chloroplast envelope" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941 EMBL:AC067971
IPI:IPI00537623 PIR:A86206 RefSeq:NP_172192.1 UniGene:At.28020
EnsemblPlants:AT1G07120.1 GeneID:837222 KEGG:ath:AT1G07120
TAIR:At1g07120 eggNOG:NOG239801 HOGENOM:HOG000070965
InParanoid:Q9LMK4 OMA:MREGDAC PhylomeDB:Q9LMK4
ProtClustDB:CLSN2682542 Genevestigator:Q9LMK4 Uniprot:Q9LMK4
Length = 392
Score = 560 (202.2 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 115/262 (43%), Positives = 171/262 (65%)
Query: 282 QKTPSFAQLYHSLTKQVEKKDLPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAIKADIET 341
++ P + Y +LTK+ + + + +NQ + +++GEI+NRS +L IK+D +
Sbjct: 129 RRAPEVVEFYRALTKR--ESHMGNKINQNGVLSPAFNRNMIGEIENRSKYLSDIKSDTDR 186
Query: 342 KGGFINSLIQKVLAAAYTNIEDLLEFVDWLDKELSSLADERAVLKHF-KWPEKKADAMRE 400
I+ LI KV AA +T+I ++ FV W+D+ELSSL DERAVLKHF KWPE+K D++RE
Sbjct: 187 HRDHIHILISKVEAATFTDISEVETFVKWIDEELSSLVDERAVLKHFPKWPERKVDSLRE 246
Query: 401 AAVEYRDLKQLENEISSYRDDTNVPFGAALKKMASLLDKSERSIQRLVKLRNSVMHSYKD 460
AA Y+ K L NEI S++D+ AL+++ SL D+ E S+ K+R+S YKD
Sbjct: 247 AACNYKRPKNLGNEILSFKDNPKDSLTQALQRIQSLQDRLEESVNNTEKMRDSTGKRYKD 306
Query: 461 CKIPVDWMLDSGIISKIKQASMKLAQMYMKRVTRELELVHNSDRESTQEALLLQGLHFAY 520
+IP +WMLD+G+I ++K +S++LAQ YMKR+ +ELE + S +E L+LQG+ FAY
Sbjct: 307 FQIPWEWMLDTGLIGQLKYSSLRLAQEYMKRIAKELES-NGSGKEGN---LMLQGVRFAY 362
Query: 521 RAHQFVGGLDSETLCAFEEIRQ 542
HQF GG D ETL F E+++
Sbjct: 363 TIHQFAGGFDGETLSIFHELKK 384
Score = 57 (25.1 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 149 DLQSEVFALKAEFVKAQSLNAELEKQNKKLVEDLVAAEAKIASLSSRE-QREAV 201
DL V L+A V+ N +LEK+N +L +++ A++++L S E +R+++
Sbjct: 10 DLLRLVKELQAYLVR----NDKLEKENHELRQEVARLRAQVSNLKSHENERKSM 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.127 0.344 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 561 527 0.00091 119 3 11 23 0.44 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 608 (65 KB)
Total size of DFA: 249 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.87u 0.12s 53.99t Elapsed: 00:00:03
Total cpu time: 53.87u 0.12s 53.99t Elapsed: 00:00:03
Start: Tue May 21 10:42:18 2013 End: Tue May 21 10:42:21 2013