Your job contains 1 sequence.
>008575
MGNDGDPKKRKSKSPKTPNESALKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSL
DSAESISELPVVEITIEEIGKSKFNSMIGLVDRERVDTKLYDDYETEKARERRLAKEARA
QELQAKNAALGKKVKEPSATKGAKGRGEASFYRVTCKDNGKGMPHDDIPNMFGRVLSGTK
YGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRSHNFISFCKLDIDIHRNIPHVHLH
EKRENKDRWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSEVAEKNVTI
RFSRRTDVMPPVPVETKHHPSSVDLLLIKGLIAETSKGTLLQFLQHEFVNIGKSLAERLI
GEMGPEFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGGCLSPAGEYNLRLGIIKELHPD
MVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGGDVVTRTAMK
RINWSSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDTKEIASAVKSAIQQCCIQLK
SKIVRKIQDREQQERKRNLSR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008575
(561 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091916 - symbol:TOP6B "topoisomerase 6 subuni... 2423 1.3e-251 1
GENEDB_PFALCIPARUM|MAL13P1.328 - symbol:MAL13P1.328 "hypo... 126 8.7e-08 2
UNIPROTKB|Q8ID53 - symbol:MAL13P1.328 "DNA topoisomerase ... 126 8.7e-08 2
UNIPROTKB|Q7RKQ6 - symbol:PY02844 "Uncharacterized protei... 123 0.00011 1
>TAIR|locus:2091916 [details] [associations]
symbol:TOP6B "topoisomerase 6 subunit B" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005694 "chromosome"
evidence=IEA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IMP] [GO:0042023 "DNA
endoreduplication" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0003002
"regionalization" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0033043
"regulation of organelle organization" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0048449 "floral
organ formation" evidence=RCA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0010026 "trichome differentiation"
evidence=IMP] InterPro:IPR003594 InterPro:IPR005734
InterPro:IPR010979 InterPro:IPR015320 Pfam:PF02518 Pfam:PF09239
ProDom:PD013790 SMART:SM00387 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0007389 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009741
GO:GO:0009330 GO:GO:0042023 EMBL:AB025629 SUPFAM:SSF46946
GO:GO:0006265 GO:GO:0010026 GO:GO:0003918 EMBL:AJ297843
IPI:IPI00517797 RefSeq:NP_188714.2 UniGene:At.8106 HSSP:O05207
ProteinModelPortal:Q9C5V6 IntAct:Q9C5V6 STRING:Q9C5V6 PaxDb:Q9C5V6
PRIDE:Q9C5V6 EnsemblPlants:AT3G20780.1 GeneID:821626
KEGG:ath:AT3G20780 TAIR:At3g20780 eggNOG:COG1389
HOGENOM:HOG000264909 InParanoid:Q9C5V6 OMA:IQSRGQQ PhylomeDB:Q9C5V6
ProtClustDB:CLSN2680020 Genevestigator:Q9C5V6 HAMAP:MF_00322
Uniprot:Q9C5V6
Length = 670
Score = 2423 (858.0 bits), Expect = 1.3e-251, P = 1.3e-251
Identities = 461/543 (84%), Positives = 499/543 (91%)
Query: 19 NESALKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEITIEE 78
NES LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVEN+LDSAESISELP VE+TIEE
Sbjct: 21 NESKLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISELPEVEVTIEE 80
Query: 79 IGKSKFNSMIGLVDRERVDTKLYDDYETXXXXXXXXXXXXXXXXXQAKNAALGKKVKEPS 138
I KSKFNSMIGL+DRERVDT+LYDDYET QAKN A GKK KEP
Sbjct: 81 IVKSKFNSMIGLIDRERVDTQLYDDYETEKARGKRLAKEARASEIQAKNLASGKKNKEPG 140
Query: 139 ATKGAKGRGEASFYRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMAL 198
+K K RGEAS+Y+VTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMAL
Sbjct: 141 VSKVLKARGEASYYKVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMAL 200
Query: 199 IWSKMSTGLPIEISSSMRSHNFISFCKLDIDIHRNIPHVHLHEKRENKDRWHGAEIQVVI 258
IWSKMSTGLPIEISSSM+S N+++FC+LDIDIHRNIPH+HLHEK+ NK++WHGAEIQVVI
Sbjct: 201 IWSKMSTGLPIEISSSMKSQNYVTFCRLDIDIHRNIPHIHLHEKKGNKEKWHGAEIQVVI 260
Query: 259 EGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSEVAEKNVTIRFSRRTDVMPPVPVETKH 318
EGNWTTYRSKILHYMRQMAVITPYAQFLF+F+SE EKNVTI+F+RRTDVMPP+P+ETKH
Sbjct: 261 EGNWTTYRSKILHYMRQMAVITPYAQFLFRFISETPEKNVTIKFTRRTDVMPPIPIETKH 320
Query: 319 HPSSVDLLLIKGLIAETSKGTLLQFLQHEFVNIGKSLAERLIGEMGPEFSPKMAVKSLTS 378
HPSSVDLLLIK LI +TSK TLLQFLQ+EFVNI K+LA RLIGEMGP+F P MAVKS+TS
Sbjct: 321 HPSSVDLLLIKRLITDTSKKTLLQFLQNEFVNINKTLAARLIGEMGPDFGPSMAVKSVTS 380
Query: 379 QQIVRIHQLFRQAKFDDPSGGCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFI 438
QQ+VRIHQLFRQAKFDDPSG CLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFI
Sbjct: 381 QQMVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFI 440
Query: 439 VEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGGDVVTRTAMKRINWSSYKINQTQDKIGV 498
VEAGVS+GG+DVKQG+NIFRFANRIPLLFEQG DVVTRTA+KRINW+SYKINQTQDKIGV
Sbjct: 441 VEAGVSLGGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGV 500
Query: 499 FVSIVSTKIPFKGTGKEYIGDDTKEIASAVKSAIQQCCIQLKSKIVRKIQDREQQERKRN 558
FVSIVSTKIPFKGTGKEYIGDD EIA+AVKSAIQQCCIQLKSKIV+++Q REQQERKR+
Sbjct: 501 FVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRS 560
Query: 559 LSR 561
LSR
Sbjct: 561 LSR 563
>GENEDB_PFALCIPARUM|MAL13P1.328 [details] [associations]
symbol:MAL13P1.328 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003594 Pfam:PF02518
GO:GO:0005524 GO:GO:0003824 GO:GO:0016853 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AL844509 HSSP:O05207 RefSeq:XP_001350366.1
ProteinModelPortal:Q8ID53 MINT:MINT-1670411
EnsemblProtists:MAL13P1.328:mRNA GeneID:813894 KEGG:pfa:MAL13P1.328
EuPathDB:PlasmoDB:PF3D7_1365600 HOGENOM:HOG000281754
ProtClustDB:CLSZ2432771 Uniprot:Q8ID53
Length = 561
Score = 126 (49.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 150 SFYRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWS-KMSTGLP 208
S+Y++TC+DNGKG D+ F + +K T GKFG+G K L++S K + G
Sbjct: 84 SYYKITCRDNGKGSKIKDLEK-FSEIFLTSKDNCS-TSGKFGIGLKTILLYSLKTAYGF- 140
Query: 209 IEISSSMRSHNFISFCKLDIDIHRNIPHVHLHEKRENKD-RWH-GAEIQVVIE-GNWTTY 265
+ I + + F L +D +N+ H + +E D W+ EI ++++ N +
Sbjct: 141 LHIKVKVEENKIWDFM-LVMD--KNLNHTFIQNFKEYIDTNWNWSVEISLILKINNKFIH 197
Query: 266 RSKILHYMR 274
+I Y++
Sbjct: 198 DQRIYTYIK 206
Score = 76 (31.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 24 KQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEIT--IEEIGK 81
K S FF +N ++ GF +L+ TV+EL +NS+D+ + + VE +EE K
Sbjct: 7 KNNSTYSFFFKNLSVTGFYEEN-ALFMTVKELFDNSVDALYNNDKEDNVETKKDLEEEKK 65
Query: 82 SKFNSMIGLVDRE 94
K + ++ E
Sbjct: 66 KKKKKKVEIIVEE 78
>UNIPROTKB|Q8ID53 [details] [associations]
symbol:MAL13P1.328 "DNA topoisomerase VI, B subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR003594 Pfam:PF02518 GO:GO:0005524
GO:GO:0003824 GO:GO:0016853 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AL844509 HSSP:O05207 RefSeq:XP_001350366.1
ProteinModelPortal:Q8ID53 MINT:MINT-1670411
EnsemblProtists:MAL13P1.328:mRNA GeneID:813894 KEGG:pfa:MAL13P1.328
EuPathDB:PlasmoDB:PF3D7_1365600 HOGENOM:HOG000281754
ProtClustDB:CLSZ2432771 Uniprot:Q8ID53
Length = 561
Score = 126 (49.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 150 SFYRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWS-KMSTGLP 208
S+Y++TC+DNGKG D+ F + +K T GKFG+G K L++S K + G
Sbjct: 84 SYYKITCRDNGKGSKIKDLEK-FSEIFLTSKDNCS-TSGKFGIGLKTILLYSLKTAYGF- 140
Query: 209 IEISSSMRSHNFISFCKLDIDIHRNIPHVHLHEKRENKD-RWH-GAEIQVVIE-GNWTTY 265
+ I + + F L +D +N+ H + +E D W+ EI ++++ N +
Sbjct: 141 LHIKVKVEENKIWDFM-LVMD--KNLNHTFIQNFKEYIDTNWNWSVEISLILKINNKFIH 197
Query: 266 RSKILHYMR 274
+I Y++
Sbjct: 198 DQRIYTYIK 206
Score = 76 (31.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 24 KQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEIT--IEEIGK 81
K S FF +N ++ GF +L+ TV+EL +NS+D+ + + VE +EE K
Sbjct: 7 KNNSTYSFFFKNLSVTGFYEEN-ALFMTVKELFDNSVDALYNNDKEDNVETKKDLEEEKK 65
Query: 82 SKFNSMIGLVDRE 94
K + ++ E
Sbjct: 66 KKKKKKVEIIVEE 78
>UNIPROTKB|Q7RKQ6 [details] [associations]
symbol:PY02844 "Uncharacterized protein" species:73239
"Plasmodium yoelii yoelii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR003594 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 EMBL:AABL01000794 RefSeq:XP_730775.1
ProteinModelPortal:Q7RKQ6 GeneID:3830000 KEGG:pyo:PY02844
EuPathDB:PlasmoDB:PY02844 eggNOG:NOG122688 Uniprot:Q7RKQ6
Length = 313
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 56/258 (21%), Positives = 113/258 (43%)
Query: 131 GKKVKEPSATKGAKGRGE-ASFYRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGK 189
G+ +E K G +SFY + C+DNG+G+ D+ + L+ + + T GK
Sbjct: 59 GEGTREKKIEIEIKEYGNNSSFYEIICRDNGEGIEVKDLEKISEMFLTSKEECI--TSGK 116
Query: 190 FGLGAKMALIWS-KMSTGLPIEISSSMRSHNFISFCKLDIDIHRNIPHVHLHEKREN-KD 247
FG+G K L++S K + G + I ++ + F L +D +N+ H + +E D
Sbjct: 117 FGIGLKTILLYSFKTAYGF-LHIKIKVKKNKIWDFI-LVLD--KNLNHTFVQNFKEYIDD 172
Query: 248 RWHGA-EIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSEVAEKNVTIRFSRRT 306
W EI V+++ N + +H ++ ++ K++ + +S +
Sbjct: 173 TWEWTIEISVILKINNNYISDQKIHSYIKLFLLWK-KNITVKYIHNPNGEQSIYTYSNNS 231
Query: 307 DVMPPVPVETKHHPSSVDLLLIKGLIAETSKGTLLQFLQHEFVNIGKSLAERLIG-EMGP 365
D + + +S++++ K I T + + +VN+ KS E++I E G
Sbjct: 232 DTSEE-NILSMLSDNSINMIFKKDFI------TSYNYDVNMYVNVRKS--EKIIPYEHGH 282
Query: 366 EFSPKMAVKSLTSQQIVR 383
++ + S ++R
Sbjct: 283 NIGFLFLIRYVNSMPLLR 300
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 561 534 0.00093 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 614 (65 KB)
Total size of DFA: 289 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 42.55u 0.10s 42.65t Elapsed: 00:00:33
Total cpu time: 42.55u 0.10s 42.65t Elapsed: 00:00:34
Start: Fri May 10 03:01:20 2013 End: Fri May 10 03:01:54 2013