Query 008577
Match_columns 561
No_of_seqs 435 out of 2288
Neff 5.7
Searched_HMMs 46136
Date Thu Mar 28 13:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008577.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008577hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 2.6E-79 5.7E-84 644.2 35.0 360 157-518 1-377 (377)
2 KOG0377 Protein serine/threoni 100.0 3.8E-78 8.3E-83 625.6 12.4 352 144-553 101-481 (631)
3 KOG0372 Serine/threonine speci 100.0 1E-76 2.2E-81 580.1 19.6 271 188-508 14-284 (303)
4 KOG0375 Serine-threonine phosp 100.0 1.7E-75 3.8E-80 594.5 15.9 327 154-535 24-386 (517)
5 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.8E-73 1E-77 588.0 29.6 312 150-517 1-313 (316)
6 cd07420 MPP_RdgC Drosophila me 100.0 5.9E-72 1.3E-76 579.8 30.6 293 163-507 2-321 (321)
7 KOG0376 Serine-threonine phosp 100.0 7.5E-72 1.6E-76 590.5 17.2 424 32-517 41-467 (476)
8 cd07416 MPP_PP2B PP2B, metallo 100.0 7E-68 1.5E-72 547.5 28.4 290 168-515 3-304 (305)
9 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.7E-67 8E-72 537.4 27.5 282 168-508 2-283 (285)
10 KOG0373 Serine/threonine speci 100.0 4.4E-68 9.5E-73 512.5 19.3 272 187-508 16-288 (306)
11 PTZ00239 serine/threonine prot 100.0 6.2E-67 1.3E-71 539.3 28.5 285 168-510 3-288 (303)
12 PTZ00480 serine/threonine-prot 100.0 2.8E-66 6E-71 536.9 28.3 270 188-508 30-300 (320)
13 PTZ00244 serine/threonine-prot 100.0 1.1E-65 2.4E-70 528.3 27.4 271 187-508 22-293 (294)
14 KOG0374 Serine/threonine speci 100.0 1.5E-65 3.3E-70 533.2 24.1 270 188-507 30-301 (331)
15 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4.2E-65 9.1E-70 524.1 25.9 269 188-507 21-290 (293)
16 smart00156 PP2Ac Protein phosp 100.0 8.6E-65 1.9E-69 516.9 26.3 267 191-508 2-269 (271)
17 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.1E-62 4.5E-67 508.2 27.3 279 184-507 15-310 (311)
18 KOG0371 Serine/threonine prote 100.0 1.9E-61 4E-66 475.6 13.9 274 188-511 31-305 (319)
19 cd00144 MPP_PPP_family phospho 100.0 5.6E-32 1.2E-36 265.0 19.5 217 224-492 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 6.6E-24 1.4E-28 213.5 15.1 126 221-349 1-145 (245)
21 cd07423 MPP_PrpE Bacillus subt 99.9 9E-22 1.9E-26 196.4 16.9 124 221-349 1-142 (234)
22 cd07425 MPP_Shelphs Shewanella 99.9 3.1E-22 6.7E-27 197.0 12.8 184 224-479 1-201 (208)
23 PRK00166 apaH diadenosine tetr 99.9 3.2E-21 7E-26 197.4 13.5 122 221-350 1-127 (275)
24 TIGR00668 apaH bis(5'-nucleosy 99.9 1.8E-21 4E-26 198.7 11.3 122 221-351 1-128 (279)
25 cd07422 MPP_ApaH Escherichia c 99.8 2.1E-21 4.6E-26 197.0 10.4 120 223-350 1-125 (257)
26 PRK11439 pphA serine/threonine 99.8 7.2E-21 1.6E-25 188.2 11.3 127 213-347 9-146 (218)
27 cd07413 MPP_PA3087 Pseudomonas 99.8 9.4E-21 2E-25 188.2 11.9 118 224-347 2-143 (222)
28 cd07421 MPP_Rhilphs Rhilph pho 99.8 6.5E-20 1.4E-24 188.1 16.6 74 222-296 3-82 (304)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.8 3.3E-20 7.1E-25 181.7 13.5 121 221-348 1-131 (207)
30 PHA02239 putative protein phos 99.8 8.6E-20 1.9E-24 183.0 12.0 125 221-348 1-167 (235)
31 PRK09968 serine/threonine-spec 99.8 9.5E-19 2.1E-23 173.4 11.3 128 212-347 6-144 (218)
32 PF08321 PPP5: PPP5 TPR repeat 99.6 3.7E-15 8E-20 129.9 8.5 93 102-215 1-95 (95)
33 KOG0376 Serine-threonine phosp 99.5 7.2E-15 1.6E-19 157.4 -0.3 326 186-520 11-346 (476)
34 PF00149 Metallophos: Calcineu 99.2 1E-10 2.2E-15 103.7 10.4 79 221-300 1-84 (200)
35 cd00841 MPP_YfcE Escherichia c 98.9 6.5E-08 1.4E-12 89.8 16.2 60 222-295 1-60 (155)
36 PRK09453 phosphodiesterase; Pr 98.9 8.9E-09 1.9E-13 98.9 9.4 69 221-295 1-77 (182)
37 PF12850 Metallophos_2: Calcin 98.7 8.9E-08 1.9E-12 87.8 11.5 61 221-295 1-61 (156)
38 COG0639 ApaH Diadenosine tetra 98.7 2.4E-08 5.1E-13 89.3 5.9 145 296-479 3-154 (155)
39 TIGR00040 yfcE phosphoesterase 98.5 3.5E-07 7.6E-12 85.7 8.4 64 221-294 1-64 (158)
40 cd07397 MPP_DevT Myxococcus xa 98.5 1.2E-06 2.5E-11 88.7 12.4 112 222-348 2-159 (238)
41 cd07379 MPP_239FB Homo sapiens 98.4 1.9E-06 4.2E-11 78.6 11.5 61 222-294 1-63 (135)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.3 1E-05 2.2E-10 76.4 12.9 65 223-295 1-66 (188)
43 cd00838 MPP_superfamily metall 98.3 5.8E-06 1.3E-10 71.8 9.8 67 224-292 1-69 (131)
44 cd07388 MPP_Tt1561 Thermus the 98.2 2.2E-06 4.8E-11 86.0 7.5 71 221-294 5-75 (224)
45 cd07394 MPP_Vps29 Homo sapiens 98.0 0.00018 3.9E-09 69.5 15.5 59 222-294 1-65 (178)
46 PRK05340 UDP-2,3-diacylglucosa 97.9 4.3E-05 9.3E-10 76.8 8.9 71 221-295 1-84 (241)
47 COG0622 Predicted phosphoester 97.8 0.00052 1.1E-08 66.4 14.9 65 221-295 2-66 (172)
48 cd07399 MPP_YvnB Bacillus subt 97.8 0.001 2.2E-08 65.9 16.5 69 222-293 2-81 (214)
49 cd07404 MPP_MS158 Microscilla 97.8 2.1E-05 4.5E-10 74.0 4.1 68 223-294 1-68 (166)
50 cd07385 MPP_YkuE_C Bacillus su 97.8 4.8E-05 1.1E-09 74.4 6.7 71 221-295 2-77 (223)
51 PRK11340 phosphodiesterase Yae 97.7 0.00015 3.2E-09 74.4 10.1 71 220-294 49-125 (271)
52 cd07403 MPP_TTHA0053 Thermus t 97.7 0.0003 6.4E-09 64.4 9.7 55 225-292 2-56 (129)
53 cd07400 MPP_YydB Bacillus subt 97.6 0.00039 8.4E-09 63.5 10.1 41 252-293 38-80 (144)
54 TIGR03729 acc_ester putative p 97.4 0.00038 8.1E-09 69.8 6.8 68 222-294 1-74 (239)
55 cd07391 MPP_PF1019 Pyrococcus 97.3 0.00077 1.7E-08 64.3 7.3 43 252-295 44-89 (172)
56 TIGR01854 lipid_A_lpxH UDP-2,3 97.3 0.0011 2.5E-08 66.2 8.8 67 224-294 2-81 (231)
57 TIGR00619 sbcd exonuclease Sbc 97.2 0.00065 1.4E-08 69.2 6.9 73 221-295 1-89 (253)
58 cd00840 MPP_Mre11_N Mre11 nucl 97.2 0.00054 1.2E-08 66.6 5.7 73 222-296 1-91 (223)
59 cd07396 MPP_Nbla03831 Homo sap 97.2 0.00085 1.8E-08 68.5 7.2 73 222-296 2-88 (267)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.2 0.00067 1.5E-08 69.7 6.1 69 223-294 1-86 (262)
61 PHA02546 47 endonuclease subun 97.1 0.00058 1.2E-08 72.5 5.7 73 221-295 1-90 (340)
62 PRK04036 DNA polymerase II sma 97.0 0.0024 5.3E-08 71.4 9.6 74 220-295 243-344 (504)
63 cd07398 MPP_YbbF-LpxH Escheric 97.0 0.0015 3.2E-08 63.7 6.6 23 419-441 177-199 (217)
64 cd07402 MPP_GpdQ Enterobacter 96.9 0.0033 7.1E-08 62.2 8.1 69 222-294 1-83 (240)
65 PRK11148 cyclic 3',5'-adenosin 96.9 0.0027 5.8E-08 65.0 7.6 73 220-294 14-98 (275)
66 cd07390 MPP_AQ1575 Aquifex aeo 96.8 0.002 4.4E-08 61.3 5.9 68 223-295 1-83 (168)
67 PRK10966 exonuclease subunit S 96.7 0.0028 6.1E-08 69.0 6.7 72 221-295 1-88 (407)
68 TIGR00024 SbcD_rel_arch putati 96.5 0.007 1.5E-07 60.9 7.1 70 221-295 15-103 (225)
69 TIGR00583 mre11 DNA repair pro 96.5 0.0065 1.4E-07 66.2 7.3 55 219-275 2-68 (405)
70 cd07383 MPP_Dcr2 Saccharomyces 96.4 0.0065 1.4E-07 59.0 6.3 71 221-292 3-87 (199)
71 cd08165 MPP_MPPE1 human MPPE1 96.3 0.0058 1.3E-07 57.8 5.4 44 252-295 41-90 (156)
72 COG2129 Predicted phosphoester 96.3 0.11 2.5E-06 52.2 14.4 211 220-496 3-217 (226)
73 cd07393 MPP_DR1119 Deinococcus 96.2 0.012 2.6E-07 59.0 7.2 42 251-294 43-84 (232)
74 cd07380 MPP_CWF19_N Schizosacc 96.1 0.016 3.4E-07 54.9 6.7 68 224-292 1-68 (150)
75 cd08163 MPP_Cdc1 Saccharomyces 95.9 0.67 1.4E-05 47.6 18.3 24 417-440 202-225 (257)
76 cd07395 MPP_CSTP1 Homo sapiens 95.8 0.029 6.4E-07 56.7 7.9 72 222-294 6-99 (262)
77 COG1409 Icc Predicted phosphoh 95.7 0.03 6.5E-07 56.2 7.6 73 221-297 1-81 (301)
78 cd00839 MPP_PAPs purple acid p 95.7 0.025 5.4E-07 57.9 6.8 70 221-296 5-83 (294)
79 cd07401 MPP_TMEM62_N Homo sapi 95.5 0.031 6.7E-07 56.9 6.9 71 223-295 2-90 (256)
80 cd07386 MPP_DNA_pol_II_small_a 95.5 0.044 9.5E-07 55.1 7.9 70 224-295 2-95 (243)
81 cd00845 MPP_UshA_N_like Escher 95.4 0.028 6.1E-07 56.3 5.8 67 222-294 2-82 (252)
82 COG2908 Uncharacterized protei 95.1 0.073 1.6E-06 54.0 7.6 101 225-349 2-118 (237)
83 cd07384 MPP_Cdc1_like Saccharo 94.9 0.036 7.8E-07 53.2 4.8 44 252-295 48-101 (171)
84 cd08166 MPP_Cdc1_like_1 unchar 94.9 0.04 8.6E-07 54.5 5.1 44 252-295 45-94 (195)
85 COG4186 Predicted phosphoester 94.5 0.19 4.2E-06 48.1 8.4 72 222-297 5-89 (186)
86 KOG0918 Selenium-binding prote 94.2 0.0039 8.5E-08 66.8 -3.8 201 248-497 46-251 (476)
87 COG1408 Predicted phosphohydro 94.0 0.14 3E-06 53.4 7.1 73 220-296 44-120 (284)
88 cd08164 MPP_Ted1 Saccharomyces 93.9 0.09 2E-06 51.9 5.2 68 227-295 23-112 (193)
89 COG1407 Predicted ICC-like pho 93.7 0.14 3.1E-06 51.9 6.3 73 221-297 20-113 (235)
90 COG0420 SbcD DNA repair exonuc 92.7 0.23 5E-06 53.5 6.5 74 221-296 1-90 (390)
91 cd07410 MPP_CpdB_N Escherichia 92.5 0.17 3.7E-06 51.8 5.0 66 222-293 2-94 (277)
92 PF14582 Metallophos_3: Metall 92.1 0.18 3.9E-06 51.1 4.4 73 221-295 6-103 (255)
93 PLN02533 probable purple acid 91.7 0.24 5.1E-06 54.5 5.2 70 221-295 140-212 (427)
94 cd07412 MPP_YhcR_N Bacillus su 91.4 0.26 5.7E-06 51.1 4.9 67 222-294 2-88 (288)
95 KOG3662 Cell division control 90.5 0.56 1.2E-05 51.2 6.5 57 236-293 81-143 (410)
96 cd07378 MPP_ACP5 Homo sapiens 89.7 0.65 1.4E-05 47.1 6.0 71 222-294 2-83 (277)
97 cd07411 MPP_SoxB_N Thermus the 89.5 0.67 1.4E-05 47.3 5.9 65 223-294 3-95 (264)
98 cd07408 MPP_SA0022_N Staphyloc 88.9 0.78 1.7E-05 46.6 5.8 65 222-293 2-81 (257)
99 PF06874 FBPase_2: Firmicute f 88.2 0.67 1.5E-05 52.9 5.1 45 252-301 187-231 (640)
100 cd07387 MPP_PolD2_C PolD2 (DNA 88.1 35 0.00076 35.3 17.2 52 434-506 206-257 (257)
101 KOG2863 RNA lariat debranching 85.2 1.8 4E-05 46.5 6.2 73 221-295 1-89 (456)
102 KOG3325 Membrane coat complex 85.1 10 0.00022 36.4 10.3 62 223-294 3-66 (183)
103 COG1768 Predicted phosphohydro 84.7 1.9 4.2E-05 42.4 5.6 44 248-295 42-87 (230)
104 TIGR00282 metallophosphoestera 82.1 2.9 6.2E-05 43.4 6.1 69 221-295 1-72 (266)
105 cd07409 MPP_CD73_N CD73 ecto-5 81.7 2.9 6.4E-05 43.1 6.0 67 222-294 2-94 (281)
106 KOG2476 Uncharacterized conser 80.9 4.4 9.5E-05 44.9 7.1 69 221-291 6-75 (528)
107 PRK09419 bifunctional 2',3'-cy 80.4 2.4 5.3E-05 52.4 5.6 67 221-293 661-735 (1163)
108 COG1311 HYS2 Archaeal DNA poly 79.1 6.4 0.00014 43.9 7.8 76 221-296 226-323 (481)
109 cd07406 MPP_CG11883_N Drosophi 78.3 4 8.7E-05 41.5 5.6 57 231-293 21-82 (257)
110 cd07407 MPP_YHR202W_N Saccharo 78.1 2.8 6.1E-05 43.6 4.5 68 222-294 7-97 (282)
111 cd00842 MPP_ASMase acid sphing 72.8 7.6 0.00016 40.0 6.0 47 251-297 70-125 (296)
112 COG3855 Fbp Uncharacterized pr 71.3 2.6 5.7E-05 46.6 2.3 41 252-297 193-233 (648)
113 cd07405 MPP_UshA_N Escherichia 68.4 6.3 0.00014 40.8 4.3 66 223-294 3-87 (285)
114 PF04042 DNA_pol_E_B: DNA poly 66.9 12 0.00027 36.3 5.8 72 223-296 1-93 (209)
115 cd07382 MPP_DR1281 Deinococcus 66.6 14 0.0003 38.1 6.3 68 222-295 1-71 (255)
116 PRK09420 cpdB bifunctional 2', 65.3 9.5 0.0002 44.4 5.4 66 222-293 27-121 (649)
117 cd08162 MPP_PhoA_N Synechococc 64.7 11 0.00023 39.9 5.2 65 223-293 3-90 (313)
118 COG0737 UshA 5'-nucleotidase/2 62.9 9.7 0.00021 42.8 4.8 68 222-295 28-116 (517)
119 cd01677 PFL2_DhaB_BssA Pyruvat 61.4 9.5 0.00021 45.4 4.5 115 57-175 192-308 (781)
120 TIGR01390 CycNucDiestase 2',3' 61.2 12 0.00026 43.4 5.2 66 222-293 4-98 (626)
121 PRK09419 bifunctional 2',3'-cy 56.3 14 0.00031 45.8 5.0 42 222-264 43-100 (1163)
122 PRK09983 pflD putative formate 56.3 14 0.0003 44.0 4.6 116 55-175 183-300 (765)
123 PRK11907 bifunctional 2',3'-cy 53.8 20 0.00042 43.0 5.4 66 222-293 117-212 (814)
124 PTZ00235 DNA polymerase epsilo 52.5 35 0.00076 36.0 6.4 76 219-295 26-123 (291)
125 TIGR01530 nadN NAD pyrophospha 52.1 27 0.00058 39.8 6.0 41 249-294 49-94 (550)
126 PRK09558 ushA bifunctional UDP 49.4 22 0.00048 40.3 4.8 68 222-295 36-122 (551)
127 TIGR01774 PFL2-3 pyruvate form 49.2 21 0.00045 42.6 4.6 114 58-175 195-310 (786)
128 PF06874 FBPase_2: Firmicute f 46.5 80 0.0017 36.7 8.5 61 419-495 507-574 (640)
129 KOG1432 Predicted DNA repair e 45.5 33 0.00072 37.0 5.0 44 251-295 102-148 (379)
130 KOG1378 Purple acid phosphatas 44.0 33 0.00072 38.3 4.9 20 422-441 323-342 (452)
131 KOG3947 Phosphoesterases [Gene 42.4 38 0.00082 35.6 4.7 67 219-295 60-127 (305)
132 KOG2679 Purple (tartrate-resis 42.4 32 0.00069 36.2 4.1 85 207-295 29-127 (336)
133 PTZ00422 glideosome-associated 41.1 40 0.00087 37.1 4.9 72 222-294 28-109 (394)
134 PRK09418 bifunctional 2',3'-cy 39.2 46 0.00099 39.8 5.4 42 222-264 41-98 (780)
135 KOG3339 Predicted glycosyltran 35.8 1.1E+02 0.0023 30.6 6.4 87 251-346 40-143 (211)
136 PF02901 PFL: Pyruvate formate 34.1 25 0.00055 41.0 2.2 114 57-175 195-311 (648)
137 PF02875 Mur_ligase_C: Mur lig 25.9 1.7E+02 0.0037 24.4 5.5 70 222-291 13-82 (91)
138 PF00036 EF-hand_1: EF hand; 23.2 27 0.00058 23.9 -0.0 16 538-553 2-17 (29)
139 KOG2310 DNA repair exonuclease 23.0 1.7E+02 0.0037 33.6 6.0 53 220-274 13-77 (646)
140 PF03494 Beta-APP: Beta-amyloi 22.6 59 0.0013 23.8 1.6 28 455-493 4-31 (39)
141 PF13258 DUF4049: Domain of un 22.3 2.6E+02 0.0056 29.0 6.6 59 281-349 127-187 (318)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.6e-79 Score=644.18 Aligned_cols=360 Identities=52% Similarity=0.979 Sum_probs=321.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCC-CCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHH
Q 008577 157 WPRNGRISLEWIQLLISTFKWSSWK-DPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHD 235 (561)
Q Consensus 157 ~P~~~~~t~~~i~~l~~~f~~~~~~-~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~d 235 (561)
||+.+.+|.+|++.||+.|++..++ .++++...++.+++.+||.+|+++|++||++++|+++...+++||||||||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~d 80 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHD 80 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHH
Confidence 8888999999999999999998777 678888999999999999999999999999999987656789999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccch
Q 008577 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDC 315 (561)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~ 315 (561)
|.++|+ ..|+++.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+.. +
T Consensus 81 L~~ll~-~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~ 158 (377)
T cd07418 81 VLFLLE-DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-G 158 (377)
T ss_pred HHHHHH-HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-H
Confidence 999999 99998877779999999999999999999999999999999999999999999999999999999999865 6
Q ss_pred hhHHHHHHHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccc------cccccCcCCHHHHHhhcccccCCCC
Q 008577 316 KLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQ------KLDTLSLGSLREFAKVNRFLEDVPE 389 (561)
Q Consensus 316 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~------~~~~~~l~sl~~I~~i~R~~~~p~~ 389 (561)
..+|+.++++|++||+++++++++|||||||++..++....++++++.. ...+..+.++++|+++.|+..+|+.
T Consensus 159 ~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~ 238 (377)
T cd07418 159 KHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPG 238 (377)
T ss_pred HHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCC
Confidence 6799999999999999999999999999999876433211111111111 1223467899999999998767775
Q ss_pred cc---ccccccccCCCCCCCccccc-CCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCC
Q 008577 390 ND---LLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV 465 (561)
Q Consensus 390 ~~---l~~DlLWSDP~~~~g~~~n~-RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~ 465 (561)
.+ +++|+|||||....|+.+|. ||.|++||++++++||++||+++||||||++|++++|.|++++++||++.|+.+
T Consensus 239 ~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~ 318 (377)
T cd07418 239 EGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVE 318 (377)
T ss_pred CCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCC
Confidence 54 57899999999989999985 999999999999999999999999999999999999999999999999988666
Q ss_pred CCeEEEEeCCCCCCCC----CCCCCceEEEEEeCCCCCCCcEEEeeC--CCCCCCCCcc
Q 008577 466 SGELYTLFTAPNYPQV----DGFDNVGAYAVLKPPLFDSPLFLQLKA--AEKPEVPPYD 518 (561)
Q Consensus 466 ~gklITVFSApnY~~~----~~~~N~gA~l~l~~~~~~~~~f~~f~~--~~~~~~p~~~ 518 (561)
+|+|||||||||||++ +.++|+||+++|+.+.+.+|+|+||+| |||+..||||
T Consensus 319 ~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (377)
T cd07418 319 SGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANPYYD 377 (377)
T ss_pred CCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCcCCC
Confidence 7999999999999954 368999999999988878999999999 9999999985
No 2
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-78 Score=625.55 Aligned_cols=352 Identities=31% Similarity=0.497 Sum_probs=320.3
Q ss_pred ccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCce
Q 008577 144 ENLTKEQDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEV 223 (561)
Q Consensus 144 ~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i 223 (561)
..++.++.||.+++| ++..++..|+++|+.+ ++||+.||+.|+.+|+++|++.||+-+|++..+..+
T Consensus 101 idv~d~y~Gp~ls~P----l~~~~i~~lieaFk~k---------q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qV 167 (631)
T KOG0377|consen 101 IDVPDSYNGPKLSLP----LRKNHIDLLIEAFKKK---------QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQV 167 (631)
T ss_pred eecCccCCCcccccC----cCchHHHHHHHHHHHh---------hhccHHHHHHHHHHHHHHHHhCCCCCccccccccce
Confidence 345555699999999 9999999999999976 579999999999999999999999999999988999
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchh
Q 008577 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 303 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~ 303 (561)
+||||+||.++||.-||. ++|+|+..++|||+|||||||.+|+|++++|+++-+.||+.+|+.|||||+.+||..|||.
T Consensus 168 TiCGDLHGklDDL~~I~y-KNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~ 246 (631)
T KOG0377|consen 168 TICGDLHGKLDDLLVILY-KNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFI 246 (631)
T ss_pred EEeccccccccceEEEEe-cCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHH
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhccc
Q 008577 304 AELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRF 383 (561)
Q Consensus 304 ~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~ 383 (561)
+|+..||... ++.+.+.+.++|+|||++.+|+.++|+||||||..++++- |.++.|.
T Consensus 247 kEv~~KYk~~-~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl~l----------------------l~kIeR~ 303 (631)
T KOG0377|consen 247 KEVESKYKRH-GKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDLDL----------------------LDKIERG 303 (631)
T ss_pred HHHHHHhhhc-ccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhHHH----------------------Hhhhhcc
Confidence 9999999987 8899999999999999999999999999999998765432 2222221
Q ss_pred c----cCCC-----------------CccccccccccCCCCCCCccccc-CCceeEeChhhHHHHHhHcCCcEEEeecCC
Q 008577 384 L----EDVP-----------------ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEG 441 (561)
Q Consensus 384 ~----~~p~-----------------~~~l~~DlLWSDP~~~~g~~~n~-RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~ 441 (561)
. +.|| ++..+.|++||||....||.||. ||+|++||||+|.+||++++++++||||||
T Consensus 304 k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHEC 383 (631)
T KOG0377|consen 304 KYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHEC 383 (631)
T ss_pred ceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeeccc
Confidence 1 1111 45677899999999999999999 999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC-CCCCCCCCcccc
Q 008577 442 PDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEVPPYDVF 520 (561)
Q Consensus 442 ~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~-~~~~~~p~~~~~ 520 (561)
+ ++|||++|+ +||+|||||+||+ ..++|+|||+.|.+. .+|+|+||+| .....+|+.++.
T Consensus 384 K------------peGyEf~Hd---~kvlTiFSASNYY--e~GSNrGAYikl~~~--~~PhfvQY~a~k~t~~~tlrqR~ 444 (631)
T KOG0377|consen 384 K------------PEGYEFCHD---NKVLTIFSASNYY--EIGSNRGAYIKLGNQ--LTPHFVQYQAAKQTKRLTLRQRM 444 (631)
T ss_pred C------------CCcceeeeC---CeEEEEEeccchh--eecCCCceEEEeCCC--CCchHHHHHhhhhhhhhhHHHHh
Confidence 5 899999997 9999999999999 678999999999765 4999999999 777778998887
Q ss_pred ccccCCC------ccccccCCCCchhhhhccCcCCCCCc
Q 008577 521 IYEDMDS------DEGEDSRLTDSDEEQDMVSRDAVGKK 553 (561)
Q Consensus 521 ~~~~~~s------d~~~~~~~~~~~~~~~~~~~~~~g~~ 553 (561)
+.+++ .|.+.++.+|+..||+.+|++.+|+=
T Consensus 445 --~~vEeSAlk~Lrerl~s~~sdL~~eF~~~D~~ksG~l 481 (631)
T KOG0377|consen 445 --GIVEESALKELRERLRSHRSDLEDEFRKYDPKKSGKL 481 (631)
T ss_pred --hHHHHHHHHHHHHHHHhhhhHHHHHHHhcChhhcCee
Confidence 77776 68899999999999999999999973
No 3
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1e-76 Score=580.13 Aligned_cols=271 Identities=37% Similarity=0.625 Sum_probs=257.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH
Q 008577 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (561)
Q Consensus 188 ~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (561)
+.+++.+|..||.+++++|.+|||++++++ |++|||||||||+||+.+|+ ..|.+++++ |+|||||||||.+|+
T Consensus 14 ~li~E~eV~~LC~~~~eiL~~E~NV~~i~t----PvtvcGDIHGQf~Dllelf~-igG~~~~t~-YLFLGDyVDRG~~Sv 87 (303)
T KOG0372|consen 14 ELIAESEVKALCAKVREILVEESNVQRIDT----PVTVCGDIHGQFYDLLELFR-IGGDVPETN-YLFLGDYVDRGYYSV 87 (303)
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCceecCC----CcEEeecccchHHHHHHHHH-hCCCCCCCc-eEeecchhccccchH
Confidence 567889999999999999999999999985 59999999999999999999 888888877 999999999999999
Q ss_pred HHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcC
Q 008577 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (561)
Q Consensus 268 Evl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs 347 (561)
|++++|++||+.||++|+|||||||++.+++.|||++||.+|||.. .+|+.+.+.|+.||++|+|++++||||||+|
T Consensus 88 Et~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~---~vWr~c~eiFdyL~l~aiid~kifCVHGGlS 164 (303)
T KOG0372|consen 88 ETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA---NVWRYCTEIFDYLSLAAIIDGKIFCVHGGLS 164 (303)
T ss_pred HHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh---HHHHHHHHHHHhhhHhheecCcEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999976 7999999999999999999999999999999
Q ss_pred cccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHHH
Q 008577 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFL 427 (561)
Q Consensus 348 ~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL 427 (561)
|+ +.++++|+.++|.. +.|..+.++|+|||||.+.+||..|+||+|++||.|+++.||
T Consensus 165 P~---------------------i~~lDqIr~lDR~~-Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~ 222 (303)
T KOG0372|consen 165 PS---------------------IQTLDQIRVLDRKQ-EVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFL 222 (303)
T ss_pred cc---------------------hhhHHHHHHhhccc-cCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHH
Confidence 64 57999999999987 678999999999999999999999999999999999999999
Q ss_pred hHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEee
Q 008577 428 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLK 507 (561)
Q Consensus 428 ~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~ 507 (561)
+.||+.+|+|+||- +.+||++.++ ++|+||||||||| .+.+|.||++.|+.+ ....|..|+
T Consensus 223 ~~N~~~~I~RaHQL------------v~eGyk~~F~---~~v~TVWSAPNYC--YrCGN~AsIl~lde~--~~~~F~vFe 283 (303)
T KOG0372|consen 223 EANGLSLICRAHQL------------VMEGYKWHFD---EKVVTVWSAPNYC--YRCGNVAAILELDED--LDKDFRVFE 283 (303)
T ss_pred HhCChHHHHHHHHH------------HHhhHHHhcC---CceEEEecCCchh--hhcCChHHheeeccc--cCcceEeee
Confidence 99999999999994 7999999775 9999999999999 689999999999877 378999999
Q ss_pred C
Q 008577 508 A 508 (561)
Q Consensus 508 ~ 508 (561)
|
T Consensus 284 a 284 (303)
T KOG0372|consen 284 A 284 (303)
T ss_pred c
Confidence 9
No 4
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.7e-75 Score=594.47 Aligned_cols=327 Identities=32% Similarity=0.554 Sum_probs=289.4
Q ss_pred CCCCCCCCCCCHHHHHH----------HHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCce
Q 008577 154 PLSWPRNGRISLEWIQL----------LISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEV 223 (561)
Q Consensus 154 ~l~~P~~~~~t~~~i~~----------l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i 223 (561)
.+++|+..++|.+.+-+ |-+.|... ..|.++.++.|+.++..+|++|+|+++|+. +|
T Consensus 24 ~Vp~p~s~~lT~~evfd~~~gkP~~~~Lr~Hf~~E---------Grl~ee~alrIi~~~a~llr~Eknmi~v~A----Pi 90 (517)
T KOG0375|consen 24 AVPFPPSHRLTDEEVFDSRTGKPRHDVLRNHFIKE---------GRLEEEQALRIINEGAALLRQEKNMIEVEA----PI 90 (517)
T ss_pred cCCCCCcccCcHHHhhcCCCCCcchHHHHHHHHhh---------cchhHHHHHHHHHHHHHHHhcCCceEeccC----Ce
Confidence 46667777777764322 12233322 247788999999999999999999999985 59
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchh
Q 008577 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 303 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~ 303 (561)
+|||||||||.||+++|+ ..|.|..++ |+|||||||||.+|+||++||++||+.||...++||||||++.++.++.|.
T Consensus 91 TVCGDIHGQf~DLmKLFE-VGG~PA~t~-YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFK 168 (517)
T KOG0375|consen 91 TVCGDIHGQFFDLMKLFE-VGGSPANTR-YLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFK 168 (517)
T ss_pred eEecccchHHHHHHHHHH-ccCCcccce-eEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHH
Confidence 999999999999999999 777776655 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhccc
Q 008577 304 AELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRF 383 (561)
Q Consensus 304 ~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~ 383 (561)
.||..||... +|+++.+.|++|||||++++.+||||||+|| .+.+++||++++|+
T Consensus 169 qEc~iKYse~----vYdaCmesFd~LPLAAlmNqQflCVHGGlSP---------------------Ei~tl~DIr~l~RF 223 (517)
T KOG0375|consen 169 QECKIKYSER----VYDACMESFDCLPLAALMNQQFLCVHGGLSP---------------------EIHTLDDIRKLDRF 223 (517)
T ss_pred HHHhHhccHH----HHHHHHHHhccchHHHHhcCceEEecCCCCc---------------------ccccHHHHHhhhhc
Confidence 9999999886 9999999999999999999999999999985 56899999999999
Q ss_pred ccCCCCccccccccccCCCCCC-------Cccccc-CCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccc
Q 008577 384 LEDVPENDLLSDVLWSDPSSEA-------GLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 455 (561)
Q Consensus 384 ~~~p~~~~l~~DlLWSDP~~~~-------g~~~n~-RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~ 455 (561)
. +||..+++||+|||||.++- -+.+|. ||+++.|...++++||+.|||-.|||+||+|||+|+ |
T Consensus 224 ~-EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYR------M- 295 (517)
T KOG0375|consen 224 K-EPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYR------M- 295 (517)
T ss_pred c-CCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhh------h-
Confidence 7 78899999999999998743 577888 999999999999999999999999999999998875 2
Q ss_pred cCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC-CCCCCCC-Cccccccc----------
Q 008577 456 NGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEVP-PYDVFIYE---------- 523 (561)
Q Consensus 456 ~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~-~~~~~~p-~~~~~~~~---------- 523 (561)
|+-...++.+.+|||||||||. +.|+|+||+++.+++ .+++.||.+ |||+|+| |+|+|+|+
T Consensus 296 --YrksqttGFPSLiTiFSAPNYL--DvYnNKAAvLKYEnN---VMNIRQFncSPHPYWLPnFMDVFTWSLPFVGEKVTe 368 (517)
T KOG0375|consen 296 --YRKSQTTGFPSLITIFSAPNYL--DVYNNKAAVLKYENN---VMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 368 (517)
T ss_pred --hhcccccCCchheeeecCCchh--hhhccHHHHhhhhcc---cceeeccCCCCCCccccchhhheeeccccchHHHHH
Confidence 4444445568999999999999 689999999999876 468999999 9999999 78999994
Q ss_pred ------cCCCccccccCC
Q 008577 524 ------DMDSDEGEDSRL 535 (561)
Q Consensus 524 ------~~~sd~~~~~~~ 535 (561)
+||||+|+.++-
T Consensus 369 MLV~iLNICSddEL~~e~ 386 (517)
T KOG0375|consen 369 MLVNVLNICSDDELMTEE 386 (517)
T ss_pred HHHHHHhhCchhhhcCcc
Confidence 799999998774
No 5
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.8e-73 Score=588.02 Aligned_cols=312 Identities=36% Similarity=0.637 Sum_probs=287.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecC
Q 008577 150 QDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDI 229 (561)
Q Consensus 150 ~~~p~l~~P~~~~~t~~~i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDI 229 (561)
+.||++.|| ++|.++++.+++.|+.. ..|+..++.+||.+|.++|++||++++++.|...+++|||||
T Consensus 1 ~~~~~~~~~---~i~~~~~~~~~~~~~~~---------~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDI 68 (316)
T cd07417 1 YDGPRLEDE---KVTLEFVKEMIEWFKDQ---------KKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDT 68 (316)
T ss_pred CCCcccCCC---CCCHHHHHHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecc
Confidence 468999776 79999999999999864 358889999999999999999999999987766789999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHH
Q 008577 230 LGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTK 309 (561)
Q Consensus 230 HG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~k 309 (561)
||||.+|.++|+ ..|+|+.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+
T Consensus 69 HG~~~dL~~ll~-~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k 147 (316)
T cd07417 69 HGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAK 147 (316)
T ss_pred cCCHHHHHHHHH-hcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhc
Confidence 999999999999 9999877777999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCC
Q 008577 310 FGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPE 389 (561)
Q Consensus 310 y~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~ 389 (561)
|+.. +|+.+.++|++||++++++++++||||||++. ...+++++.++.|+. +++.
T Consensus 148 ~~~~----l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------~~~~l~~i~~i~r~~-~~~~ 202 (316)
T cd07417 148 YNEQ----MFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------DGVTLDDIRKIDRFR-QPPD 202 (316)
T ss_pred ccHH----HHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------CCccHHHhhcccCCC-CCCc
Confidence 9764 99999999999999999999999999999642 346899999999985 6778
Q ss_pred ccccccccccCCCCCCCcccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeE
Q 008577 390 NDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGEL 469 (561)
Q Consensus 390 ~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gkl 469 (561)
+++++|+|||||....++.+|.||.|+.||++++++||++||+++||||||+ +++||++.|+ |+|
T Consensus 203 ~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~---~~~ 267 (316)
T cd07417 203 SGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYEVEHD---GKC 267 (316)
T ss_pred cccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEEEecC---CeE
Confidence 8899999999999988999999999999999999999999999999999997 5899999875 999
Q ss_pred EEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC-CCCCCCCCc
Q 008577 470 YTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEVPPY 517 (561)
Q Consensus 470 ITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~-~~~~~~p~~ 517 (561)
+||||||||| +.++|+||++.++.++ .+++|++|++ |+|.++|+.
T Consensus 268 ~TvfSa~~Y~--~~~~N~ga~~~i~~~~-~~~~~~~~~~~~~~~~~~~~ 313 (316)
T cd07417 268 ITVFSAPNYC--DQMGNKGAFIRITGSD-LKPKFTQFEAVPHPNVKPMA 313 (316)
T ss_pred EEEeCCcccc--CCCCcceEEEEEeCCC-ceeeeEeccCCCCCCCCccC
Confidence 9999999999 5789999999998744 4889999999 999999973
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=5.9e-72 Score=579.80 Aligned_cols=293 Identities=33% Similarity=0.583 Sum_probs=263.0
Q ss_pred CCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHH
Q 008577 163 ISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEE 242 (561)
Q Consensus 163 ~t~~~i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~ 242 (561)
+|.++++.+++.+... ..|+.+++.+||.+|+++|++||++++|+.+..++++|||||||||.+|.++|+
T Consensus 2 ~~~~~~~~~i~~~~~~---------~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~- 71 (321)
T cd07420 2 LTKDHIDALIEAFKEK---------QLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFY- 71 (321)
T ss_pred CCHHHHHHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHH-
Confidence 8999999999998754 358889999999999999999999999987767799999999999999999999
Q ss_pred hcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHH
Q 008577 243 NAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKC 322 (561)
Q Consensus 243 ~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~ 322 (561)
..|+|+.+++|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||..||..+|+.. ...+|+.+
T Consensus 72 ~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~~ 150 (321)
T cd07420 72 KNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRLL 150 (321)
T ss_pred HcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHHH
Confidence 99998776779999999999999999999999999999999999999999999999999999999999864 56799999
Q ss_pred HHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhccccc----CCCC---------
Q 008577 323 LECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLE----DVPE--------- 389 (561)
Q Consensus 323 ~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~----~p~~--------- 389 (561)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .||.
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~ 208 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------TDLDLLDKIDRHKYVSVLRPPLRKGMEELTG 208 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------cCHHHHHhhhccccccccCCCcccccccccc
Confidence 999999999999999999999999842 36788888877421 1121
Q ss_pred -------------ccccccccccCCCCCCCcccc-cCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccc
Q 008577 390 -------------NDLLSDVLWSDPSSEAGLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 455 (561)
Q Consensus 390 -------------~~l~~DlLWSDP~~~~g~~~n-~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~ 455 (561)
..+++|+|||||....++.+| .||.|++||++++++||++||+++||||||+ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~------------v~ 276 (321)
T cd07420 209 EEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC------------KP 276 (321)
T ss_pred ccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hh
Confidence 146789999999987775555 4999999999999999999999999999997 58
Q ss_pred cCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEee
Q 008577 456 NGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLK 507 (561)
Q Consensus 456 ~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~ 507 (561)
+||++.|+ |+||||||||||| +.++|+||++.++++ .+++|.+|+
T Consensus 277 ~G~~~~~~---~~~iTvFSa~nY~--~~~~N~gavl~i~~~--~~~~f~~~~ 321 (321)
T cd07420 277 EGYEFCHN---NKVITIFSASNYY--EEGSNRGAYIKLGPD--LTPHFVQYQ 321 (321)
T ss_pred cceEEecC---CeEEEEecCCccC--CCCCccEEEEEECCC--CceeEEEeC
Confidence 99999885 9999999999999 568999999999875 488999985
No 7
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.5e-72 Score=590.52 Aligned_cols=424 Identities=31% Similarity=0.525 Sum_probs=384.3
Q ss_pred hhhHHHHHHHHHhccccCCcccccchhhHHHHHHHhhh-hhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh
Q 008577 32 ENLRRVFMIFEIAGGVVNGRTKQVTEADAEQLWCSSVD-GVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS 110 (561)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~ 110 (561)
.+.|++.+++....|.+..+..+..|.|.+.+.||+.+ ..|.+..+-++-++-.++.....++++.++++.+ ||.+++
T Consensus 41 ~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~-Ec~~~v 119 (476)
T KOG0376|consen 41 FANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKID-ECNKIV 119 (476)
T ss_pred echhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHH-HHHHHH
Confidence 46789999999999999999999999999999999999 6667888999999999999999999999998865 799999
Q ss_pred hhhhhhHhhhhhhhhhhhhccchhhhh-hcCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccC
Q 008577 111 KQRVFDSSLQGLLEELQVEVGSTMRER-LVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNV 189 (561)
Q Consensus 111 k~~~Fe~ai~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f~~~~~~~~~~~~~~ 189 (561)
++++||+||...... + .+..+. +..++...+...+.||.+ +..++|.+|+..+++.|+.+ +.
T Consensus 120 s~~~fe~ai~~~~~d-~----~s~~~~~~~~~~~~~i~~~y~g~~l---e~~kvt~e~vk~~~~~~~~~---------~~ 182 (476)
T KOG0376|consen 120 SEEKFEKAILTPEGD-K----KSVVEMKIDEEDMDLIESDYSGPVL---EDHKVTLEFVKTLMEVFKNQ---------KK 182 (476)
T ss_pred HHHhhhhcccCCccC-C----ccccccccccccccccccccCCccc---ccchhhHHHHHHHHHhhhcc---------cc
Confidence 999999999984322 1 122222 322333334455689998 66689999999999999876 35
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHH
Q 008577 190 MPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV 269 (561)
Q Consensus 190 L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv 269 (561)
|+..++.+|+..+..+++++|++++++.|...++.||||+|||+++++++|. ..|.|+.+..|+|+|||||||.+|.|+
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~-l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHh-hcCCCCCcccccccCceeeecccceee
Confidence 6777889999999999999999999999989999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCcc
Q 008577 270 LLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRR 349 (561)
Q Consensus 270 l~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~ 349 (561)
+..+++.|+.+|+++|++|||||+..|+..|||..++..+|+.. .+..+.+.|.+||++.+|+++++.+|||+++.
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~----~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~ 337 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEE----MFNLFSEVFIWLPLAHLINNKVLVMHGGLFSP 337 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHH----HHHhhhhhhccccchhhhcCceEEEecCcCCC
Confidence 99999999999999999999999999999999999999999886 88888899999999999999999999999875
Q ss_pred cCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHHHhH
Q 008577 350 TCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKE 429 (561)
Q Consensus 350 ~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~ 429 (561)
. -.++++++++.|+. .|++.+.++++|||||++.+|+.+|.||.|+.||+|++++||+.
T Consensus 338 ~--------------------~v~l~d~r~i~r~~-~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~ 396 (476)
T KOG0376|consen 338 D--------------------GVTLEDFRNIDRFE-QPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQD 396 (476)
T ss_pred C--------------------CccHHHHHhhhhcc-CCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhh
Confidence 3 25799999999994 78899999999999999999999999999999999999999999
Q ss_pred cCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC-
Q 008577 430 NHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA- 508 (561)
Q Consensus 430 n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~- 508 (561)
||+++||||||++ ..||++.|. |+|+||||||||| ++++|.||+|.+++++ .+|.|++|++
T Consensus 397 n~l~~i~rshe~~------------d~gy~~eh~---g~l~tvfsapnyc--d~~~n~ga~i~~~~~~-~~p~~~~~e~v 458 (476)
T KOG0376|consen 397 NNLDKIIRSHEVK------------DEGYEVEHS---GKLITVFSAPNYC--DQMGNKGAFIHLEPDD-LTPNFYTFEAV 458 (476)
T ss_pred cchHHHhhccccC------------CCceeeecC---CcEEEEecCcchh--hhcCCcceEEEecCCC-CccceeecccC
Confidence 9999999999985 579999995 9999999999999 6899999999999876 6999999999
Q ss_pred CCCCCCCCc
Q 008577 509 AEKPEVPPY 517 (561)
Q Consensus 509 ~~~~~~p~~ 517 (561)
|||...|+-
T Consensus 459 p~~~~~~ma 467 (476)
T KOG0376|consen 459 PHPDVKPMA 467 (476)
T ss_pred CCCCCCCcc
Confidence 999999874
No 8
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=7e-68 Score=547.53 Aligned_cols=290 Identities=34% Similarity=0.591 Sum_probs=259.3
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCC
Q 008577 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (561)
Q Consensus 168 i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p 247 (561)
++.|++.|... ..|+.+++.+||.+|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.|
T Consensus 3 ~~~~~~~~~~~---------~~l~~~~i~~l~~~~~~il~~e~~l~~i~----~~i~ViGDIHG~~~dL~~l~~-~~g~~ 68 (305)
T cd07416 3 IDVLKAHFMRE---------GRLSEEDALRIITEGAEILRQEPNLLRIE----APVTVCGDIHGQFYDLLKLFE-VGGSP 68 (305)
T ss_pred HHHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHhCCCeEccC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 34566777654 35788999999999999999999999997 469999999999999999999 99988
Q ss_pred CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhc
Q 008577 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (561)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (561)
+.+. |||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||..|+..+|+.. +|..+.++|+
T Consensus 69 ~~~~-ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~----l~~~~~~~f~ 143 (305)
T cd07416 69 ANTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDACMEAFD 143 (305)
T ss_pred CCce-EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHH----HHHHHHHHHh
Confidence 7655 9999999999999999999999999999999999999999999999999999999999654 9999999999
Q ss_pred CCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCC--
Q 008577 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEA-- 405 (561)
Q Consensus 328 ~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~-- 405 (561)
+||++++++++++||||||++. +.++++|.++.|+. +++..++++|+|||||....
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~ 201 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPE---------------------LKTLDDIRKLDRFR-EPPAFGPMCDLLWSDPLEDFGN 201 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcc---------------------cccHHHhcccCCCC-CCCCCCcceeeeecCccccccc
Confidence 9999999999999999999853 46899999999986 56678889999999997643
Q ss_pred -----Ccccc-cCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccC---CCCeEEEEeCCC
Q 008577 406 -----GLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDT---VSGELYTLFTAP 476 (561)
Q Consensus 406 -----g~~~n-~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~---~~gklITVFSAp 476 (561)
+|.+| .||.|++||++++++||++||+++||||||+ +++||++.|+. ..++||||||||
T Consensus 202 ~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~~~~~~iTvFSa~ 269 (305)
T cd07416 202 EKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAP 269 (305)
T ss_pred ccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcCCCCcEEEEeCCc
Confidence 47777 4999999999999999999999999999997 58999998751 113999999999
Q ss_pred CCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC-CCCCCCC
Q 008577 477 NYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEVP 515 (561)
Q Consensus 477 nY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~-~~~~~~p 515 (561)
||| +.++|+||++.++++ ..+|.+|.+ |||.++|
T Consensus 270 ~Y~--~~~~N~~a~l~i~~~---~~~~~~~~~~~~~~~~~ 304 (305)
T cd07416 270 NYL--DVYNNKAAVLKYENN---VMNIRQFNCSPHPYWLP 304 (305)
T ss_pred ccc--CCCCceEEEEEEcCC---cceEEEecCCCCCCCCC
Confidence 999 568999999999775 368999999 9999887
No 9
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.7e-67 Score=537.42 Aligned_cols=282 Identities=38% Similarity=0.668 Sum_probs=257.1
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCC
Q 008577 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (561)
Q Consensus 168 i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p 247 (561)
++.+++.+... ..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..+++
T Consensus 2 ~~~~~~~~~~~---------~~l~~~~~~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~dL~~ll~-~~~~~ 67 (285)
T cd07415 2 LDKWIEQLKKC---------ELLPESEVKSLCEKAKEILVKESNVQRVR----SPVTVCGDIHGQFYDLLELFR-VGGDP 67 (285)
T ss_pred HHHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHhCCCEEecC----CCEEEEEeCCCCHHHHHHHHH-HcCCC
Confidence 34566666543 35888999999999999999999999997 469999999999999999999 88887
Q ss_pred CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhc
Q 008577 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (561)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (561)
+.+. |||||||||||++|+|++.+|+++|+.+|+++++||||||.+.++..|||..|+..+|+.. .+|+.+.++|+
T Consensus 68 ~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~---~l~~~~~~~f~ 143 (285)
T cd07415 68 PDTN-YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNA---NVWKYCTDLFD 143 (285)
T ss_pred CCCe-EEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCch---HHHHHHHHHHH
Confidence 7655 9999999999999999999999999999999999999999999999999999999999852 59999999999
Q ss_pred CCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCc
Q 008577 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (561)
Q Consensus 328 ~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~ 407 (561)
+||++|+++++++||||||++. +.++++|.++.|+. +++.+++++|+|||||....+|
T Consensus 144 ~lPlaaii~~~i~cvHgGi~p~---------------------~~~~~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~ 201 (285)
T cd07415 144 YLPLAALIDNQIFCVHGGLSPS---------------------IDTLDQIRAIDRFQ-EVPHEGPMCDLLWSDPDDIEGW 201 (285)
T ss_pred HhHHHhEeCCeEEEEcCCCCCC---------------------cccHHHhhcccCCC-CCCCCCCccceEecCCCccCCC
Confidence 9999999999999999999853 46899999999987 5667888999999999998999
Q ss_pred ccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCc
Q 008577 408 RENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNV 487 (561)
Q Consensus 408 ~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~ 487 (561)
.+|.||.|++||++++++||++||+++||||||+ +++||++.|+ |+||||||||||| +.++|+
T Consensus 202 ~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~---~~~~TvfSa~~y~--~~~~n~ 264 (285)
T cd07415 202 GISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL------------VMEGYQWMFD---DKLVTVWSAPNYC--YRCGNV 264 (285)
T ss_pred CcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc------------ccceEEEecC---CcEEEEecCCccc--CCCCce
Confidence 9999999999999999999999999999999997 5899999875 9999999999999 568999
Q ss_pred eEEEEEeCCCCCCCcEEEeeC
Q 008577 488 GAYAVLKPPLFDSPLFLQLKA 508 (561)
Q Consensus 488 gA~l~l~~~~~~~~~f~~f~~ 508 (561)
||++.++.+. +++|.+|++
T Consensus 265 ~a~l~i~~~~--~~~~~~~~~ 283 (285)
T cd07415 265 ASIMELDEHL--KRSFKVFEA 283 (285)
T ss_pred EEEEEECCCC--cEeEEEecc
Confidence 9999998753 789999985
No 10
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-68 Score=512.47 Aligned_cols=272 Identities=33% Similarity=0.571 Sum_probs=256.2
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCCh
Q 008577 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (561)
Q Consensus 187 ~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (561)
++.||++++.+||+-++++|..|.|++.++. +++|||||||||+||+++|+ ..|..+..+ |||+|||||||.+|
T Consensus 16 ckyLpE~elk~LCe~v~d~L~eEsNvqPV~t----PVTvCGDIHGQFyDL~eLFr-tgG~vP~tn-YiFmGDfVDRGyyS 89 (306)
T KOG0373|consen 16 CKYLPENELKRLCEMVKDILMEESNVQPVST----PVTVCGDIHGQFYDLLELFR-TGGQVPDTN-YIFMGDFVDRGYYS 89 (306)
T ss_pred cCCCCHHHHHHHHHHHHHHHhhhcCccccCC----CeeEeeccchhHHHHHHHHH-hcCCCCCcc-eEEecccccccccc
Confidence 4789999999999999999999999999985 59999999999999999999 888777665 99999999999999
Q ss_pred HHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCc
Q 008577 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (561)
Q Consensus 267 lEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (561)
+|++.+|+.||..||.++.+||||||++.+...|||++||..|||.. ..|+.+..+|+.|+++|+|+++++|||||+
T Consensus 90 LEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVFD~LtlaAiID~~vLCVHGGL 166 (306)
T KOG0373|consen 90 LETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVFDFLTLAAIIDEKVLCVHGGL 166 (306)
T ss_pred HHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHHhhhhHHHHhcCcEEEEcCCC
Confidence 99999999999999999999999999999999999999999999987 799999999999999999999999999999
Q ss_pred CcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHH
Q 008577 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEF 426 (561)
Q Consensus 347 s~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~F 426 (561)
|| ++.++++|+-+.|.. +.|..+..||++||||.....|.-|+||+|++||.+++.+|
T Consensus 167 SP---------------------dirtlDqir~i~R~q-EiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF 224 (306)
T KOG0373|consen 167 SP---------------------DIRTLDQIRLIERNQ-EIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEF 224 (306)
T ss_pred Cc---------------------cceeHHHHHhHHhhc-cCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHH
Confidence 86 467999999999987 67789999999999999999999999999999999999999
Q ss_pred HhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCe-EEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEE
Q 008577 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGE-LYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQ 505 (561)
Q Consensus 427 L~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gk-lITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~ 505 (561)
+.-|+|++|.|+||- +.+||++.++ +| ++||||||||| .+.+|.||++.++.+. ++++..
T Consensus 225 ~~iN~L~LicRaHQL------------V~EG~KymF~---eK~lvTVWSAPNYC--YRCGNvAsi~~~d~~~--~r~~k~ 285 (306)
T KOG0373|consen 225 NHINNLNLICRAHQL------------VQEGFKYMFD---EKGLVTVWSAPNYC--YRCGNVASIMSFDDNL--ERETKI 285 (306)
T ss_pred HhccchHHHHhHHHH------------HHhhHHhccC---CCCEEEEecCCchh--hhccCeeeEEEecccC--Ccccee
Confidence 999999999999995 7999999764 55 99999999999 6899999999998774 789999
Q ss_pred eeC
Q 008577 506 LKA 508 (561)
Q Consensus 506 f~~ 508 (561)
|.|
T Consensus 286 F~a 288 (306)
T KOG0373|consen 286 FSA 288 (306)
T ss_pred eee
Confidence 998
No 11
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=6.2e-67 Score=539.34 Aligned_cols=285 Identities=33% Similarity=0.576 Sum_probs=258.0
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCC
Q 008577 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (561)
Q Consensus 168 i~~l~~~f~~~~~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p 247 (561)
++.+++.++.. ..|+++++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~---------~~l~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~~L~~l~~-~~~~~ 68 (303)
T PTZ00239 3 IDRHIATLLNG---------GCLPERDLKLICERAKEIFLEESNVQPVR----APVNVCGDIHGQFYDLQALFK-EGGDI 68 (303)
T ss_pred HHHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHhCCCeEecC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 45566666543 35788999999999999999999999997 469999999999999999999 88887
Q ss_pred CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhc
Q 008577 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (561)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (561)
+.+. |||||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. .+|+.++++|+
T Consensus 69 ~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f~ 144 (303)
T PTZ00239 69 PNAN-YIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVFD 144 (303)
T ss_pred CCce-EEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHHH
Confidence 6655 9999999999999999999999999999999999999999999999999999999999863 48999999999
Q ss_pred CCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCc
Q 008577 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (561)
Q Consensus 328 ~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~ 407 (561)
+||++++++++++||||||++. +.++++|+++.|+. ++|.+++++|+|||||....+|
T Consensus 145 ~LPlaaii~~~i~cvHgGi~p~---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~ 202 (303)
T PTZ00239 145 CLPLAALIEGQILCVHGGLSPD---------------------MRTIDQIRTIDRKI-EIPHEGPFCDLMWSDPEEVEYW 202 (303)
T ss_pred hCchheEEcCeEEEEcCccCcc---------------------cccHhhhccccCCC-CCCCCCCceeeEecCccccCCC
Confidence 9999999999999999999853 46899999999997 5667888999999999988899
Q ss_pred ccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCc
Q 008577 408 RENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNV 487 (561)
Q Consensus 408 ~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~ 487 (561)
.+|.||.|++||++++++||++||+++||||||+ +++||++.|+ +++||||||||||| +.++|+
T Consensus 203 ~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~--~~~~N~ 266 (303)
T PTZ00239 203 AVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYC--YRCGNI 266 (303)
T ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCccc--CCCCce
Confidence 9999999999999999999999999999999997 5899998763 46699999999999 578999
Q ss_pred eEEEEEeCCCCCCCcEEEeeC-CC
Q 008577 488 GAYAVLKPPLFDSPLFLQLKA-AE 510 (561)
Q Consensus 488 gA~l~l~~~~~~~~~f~~f~~-~~ 510 (561)
||++.++.+. +++|.+|++ |+
T Consensus 267 ~ail~i~~~~--~~~~~~~~~~~~ 288 (303)
T PTZ00239 267 ASILCLDENL--QQTWKTFKEVPE 288 (303)
T ss_pred EEEEEECCCC--cEeeEEeeCCCc
Confidence 9999998764 789999998 44
No 12
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.8e-66 Score=536.92 Aligned_cols=270 Identities=34% Similarity=0.645 Sum_probs=250.1
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH
Q 008577 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (561)
Q Consensus 188 ~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (561)
..|+.+++.+||.+|+++|++||++++++ .+++||||||||+.+|.++|. ..|+++.+. |||||||||||++|+
T Consensus 30 ~~l~~~~i~~l~~~~~~il~~ep~ll~i~----~~i~vvGDIHG~~~dL~~l~~-~~g~~~~~~-ylfLGDyVDRG~~s~ 103 (320)
T PTZ00480 30 VNLTEAEVRGLCIKARDIFISQPILLELE----APLKICGDVHGQYFDLLRLFE-YGGYPPESN-YLFLGDYVDRGKQSL 103 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEecC----CCeEEEeecccCHHHHHHHHH-hcCCCCcce-EEEeceecCCCCCcH
Confidence 36889999999999999999999999997 469999999999999999999 999987765 999999999999999
Q ss_pred HHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcC
Q 008577 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (561)
Q Consensus 268 Evl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs 347 (561)
||+.+|+++|+.+|.++++||||||...++..|||..|+..+|+.. +|..++++|.+||+||+|++++|||||||+
T Consensus 104 evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~----l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~ 179 (320)
T PTZ00480 104 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIK----LWKTFTDCFNCLPVAALIDEKILCMHGGLS 179 (320)
T ss_pred HHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHH----HHHHHHHHHHhccHhheecCcEEEEcCCcC
Confidence 9999999999999999999999999999999999999999999754 999999999999999999999999999998
Q ss_pred cccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCC-CCCcccccCCceeEeChhhHHHH
Q 008577 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEF 426 (561)
Q Consensus 348 ~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~-~~g~~~n~RG~g~~FG~d~~~~F 426 (561)
+. +.++++|+++.|+. +.+..++++|+|||||.. ..+|.+|.||.|++||++++++|
T Consensus 180 p~---------------------~~~l~~i~~i~rp~-~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~F 237 (320)
T PTZ00480 180 PE---------------------LSNLEQIRRIMRPT-DVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVF 237 (320)
T ss_pred cc---------------------cCCHHHHhcccCCC-CCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHH
Confidence 53 46899999999997 567889999999999986 46899999999999999999999
Q ss_pred HhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEe
Q 008577 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (561)
Q Consensus 427 L~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f 506 (561)
|++||+++||||||+ +++||++.|+ |+||||||||||| +..+|+||++.++.+. ..+|.+|
T Consensus 238 l~~n~l~~IiR~Hq~------------v~~G~~~~~~---~~~iTvFSa~~Y~--~~~~N~ga~l~i~~~~--~~~~~~~ 298 (320)
T PTZ00480 238 LKKHELDLICRAHQV------------VEDGYEFFSK---RQLVTLFSAPNYC--GEFDNAGSMMTIDESL--MCSFQIL 298 (320)
T ss_pred HHhCCCcEEEEcCcc------------ccCceEEeCC---CcEEEEeCCcccC--CCCCccEEEEEECCCC--cEeEEEe
Confidence 999999999999997 5899999875 9999999999999 5689999999998764 6788888
Q ss_pred eC
Q 008577 507 KA 508 (561)
Q Consensus 507 ~~ 508 (561)
.+
T Consensus 299 ~p 300 (320)
T PTZ00480 299 KP 300 (320)
T ss_pred cC
Confidence 75
No 13
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.1e-65 Score=528.31 Aligned_cols=271 Identities=32% Similarity=0.620 Sum_probs=249.2
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCCh
Q 008577 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (561)
Q Consensus 187 ~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (561)
...++.+++.+||.+|+++|++||+++++++ +++||||||||+.+|.++|+ ..++++.+. |||||||||||++|
T Consensus 22 ~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~----p~~ViGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s 95 (294)
T PTZ00244 22 QILIREEDIRAVLTEVREIFMSQPMLLEIRP----PVRVCGDTHGQYYDLLRIFE-KCGFPPYSN-YLFLGDYVDRGKHS 95 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeccC----CceeeccCCCCHHHHHHHHH-HcCCCCccc-EEEeeeEecCCCCH
Confidence 3468899999999999999999999999974 59999999999999999999 999987765 99999999999999
Q ss_pred HHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCc
Q 008577 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (561)
Q Consensus 267 lEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (561)
+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. +|+.+.++|++||++++++++++||||||
T Consensus 96 ~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~----l~~~~~~~f~~lPlaaii~~~il~vHgGi 171 (294)
T PTZ00244 96 VETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIK----LFKAFTDVFNTMPVCCVISEKIICMHGGL 171 (294)
T ss_pred HHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHH----HHHHHHHHHHhCchheEecCeeEEEcCCC
Confidence 99999999999999999999999999999999999999999999754 99999999999999999999999999999
Q ss_pred CcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCC-CCCcccccCCceeEeChhhHHH
Q 008577 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEE 425 (561)
Q Consensus 347 s~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~-~~g~~~n~RG~g~~FG~d~~~~ 425 (561)
++. +.++++++.+.|+. +++..++++|+|||||.. ..+|.+|+||.|++||++++++
T Consensus 172 ~p~---------------------~~~l~~i~~i~rp~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~ 229 (294)
T PTZ00244 172 SPD---------------------LTSLASVNEIERPC-DVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVND 229 (294)
T ss_pred Cch---------------------hhHHHHhhhhcccc-CCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHH
Confidence 864 35799999999987 567888999999999987 4689999999999999999999
Q ss_pred HHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEE
Q 008577 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQ 505 (561)
Q Consensus 426 FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~ 505 (561)
||++||+++||||||+ +++||++.|+ |+||||||||||| +..+|+||++.++.+. ..+|.+
T Consensus 230 Fl~~n~l~~iiR~Hq~------------~~~G~~~~~~---~~~iTvfSa~~Y~--~~~~N~~a~l~i~~~~--~~~f~~ 290 (294)
T PTZ00244 230 FLDMVDMDLIVRAHQV------------MERGYGFFAS---RQLVTVFSAPNYC--GEFDNDAAVMNIDDKL--QCSFLI 290 (294)
T ss_pred HHHHcCCcEEEEcCcc------------ccCceEEcCC---CeEEEEeCCcccc--CCCCceEEEEEECCCC--cEeEEE
Confidence 9999999999999997 5899999774 9999999999999 5689999999998764 678887
Q ss_pred eeC
Q 008577 506 LKA 508 (561)
Q Consensus 506 f~~ 508 (561)
|.|
T Consensus 291 ~~~ 293 (294)
T PTZ00244 291 IPA 293 (294)
T ss_pred eec
Confidence 764
No 14
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.5e-65 Score=533.16 Aligned_cols=270 Identities=37% Similarity=0.660 Sum_probs=249.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcC-CCCCCceEEEecCccccCCCh
Q 008577 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWG 266 (561)
Q Consensus 188 ~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g-~p~~~~~~VFLGDyVDRG~~S 266 (561)
..++..++.+||..+.++|.++|+++++++ ||.|||||||||.||+++|. ..| +|++.+ |||||||||||++|
T Consensus 30 ~~l~~~ei~~l~~~~~~if~~~~~l~e~~a----PV~i~GDiHGq~~DLlrlf~-~~g~~pp~~~-ylFLGDYVDRG~~s 103 (331)
T KOG0374|consen 30 VPLSKSEIIKLCDKAREIFLSQPTLLELSA----PVKIVGDIHGQFGDLLRLFD-LLGSFPPDQN-YVFLGDYVDRGKQS 103 (331)
T ss_pred eeccHHHHHHHHHHHHHHhcCCCceeecCC----CEEEEccCcCCHHHHHHHHH-hcCCCCCccc-EEEecccccCCccc
Confidence 348889999999999999999999999985 59999999999999999999 999 887666 99999999999999
Q ss_pred HHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCc
Q 008577 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (561)
Q Consensus 267 lEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (561)
+||+.+|+++|+.||++||+||||||++.+|..|||++||..+|+. ..+|+.|+..|++||++|+|+++++|+||||
T Consensus 104 lE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGl 180 (331)
T KOG0374|consen 104 LETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDAFNCLPLAALIDGKILCMHGGL 180 (331)
T ss_pred eEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHHHhhCchhheecceEEEecCCC
Confidence 9999999999999999999999999999999999999999999985 2599999999999999999999999999999
Q ss_pred CcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCC-CCcccccCCceeEeChhhHHH
Q 008577 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 425 (561)
Q Consensus 347 s~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~-~g~~~n~RG~g~~FG~d~~~~ 425 (561)
++ .+.++++|+++.|| .++++.++++|+|||||... .||.+|.||.++.||++++++
T Consensus 181 sp---------------------~l~~~~~i~~i~rp-~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~ 238 (331)
T KOG0374|consen 181 SP---------------------HLKSLDQIRAIPRP-TDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVED 238 (331)
T ss_pred Ch---------------------hhcChHHHhhccCC-cCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHH
Confidence 86 45789999999999 47888899999999999986 799999999999999999999
Q ss_pred HHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEE
Q 008577 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQ 505 (561)
Q Consensus 426 FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~ 505 (561)
||+++++++||||||+ +++||+++. +++++||||||||| +.++|.||++.++.+. ..+|..
T Consensus 239 f~~~~~ldlivRaHqv------------v~dGyeffa---~r~lvTIFSAP~Yc--g~~~n~gavm~Vd~~l--~~sf~~ 299 (331)
T KOG0374|consen 239 FCKKLDLDLIVRAHQV------------VEDGYEFFA---GRKLVTIFSAPNYC--GEFDNAGAVMRVDKNL--KCSFVI 299 (331)
T ss_pred HHHHhCcceEEEcCcc------------ccccceEec---CceEEEEecCchhc--cccCCceEEEEECCCC--eEEEEE
Confidence 9999999999999997 699999854 58999999999999 5799999999998875 455555
Q ss_pred ee
Q 008577 506 LK 507 (561)
Q Consensus 506 f~ 507 (561)
..
T Consensus 300 l~ 301 (331)
T KOG0374|consen 300 LR 301 (331)
T ss_pred ec
Confidence 44
No 15
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=4.2e-65 Score=524.08 Aligned_cols=269 Identities=36% Similarity=0.660 Sum_probs=248.4
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH
Q 008577 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (561)
Q Consensus 188 ~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (561)
..++.+++.+||.+|+++|++||+++++++ +++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~~----~i~viGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELEA----PLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecCC----ceEEEEecCCCHHHHHHHHH-hcCCCCcce-EEEEeeEecCCCCcH
Confidence 368899999999999999999999999974 69999999999999999999 999987665 999999999999999
Q ss_pred HHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcC
Q 008577 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (561)
Q Consensus 268 Evl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs 347 (561)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. +|..+.++|++||++|+++++++|||||++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~----l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~ 170 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPVAAIIDEKIFCMHGGLS 170 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHH----HHHHHHHHHHHhHHHHhhCCcEEEEccCCC
Confidence 9999999999999999999999999999999999999999999764 999999999999999999999999999998
Q ss_pred cccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCC-CCCcccccCCceeEeChhhHHHH
Q 008577 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEF 426 (561)
Q Consensus 348 ~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~-~~g~~~n~RG~g~~FG~d~~~~F 426 (561)
+. +.++++|+++.|+. +.+..++++|+|||||.. ..+|.+|.||.|++||++++++|
T Consensus 171 p~---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~F 228 (293)
T cd07414 171 PD---------------------LQSMEQIRRIMRPT-DVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKF 228 (293)
T ss_pred cc---------------------cCcHHHHhcccCCC-CCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHH
Confidence 53 46899999999986 566788999999999986 46889999999999999999999
Q ss_pred HhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEe
Q 008577 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (561)
Q Consensus 427 L~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f 506 (561)
|++||+++||||||+ +++||++.|+ |+||||||||||| +.++|+||++.++.+. ..+|.+|
T Consensus 229 l~~n~l~~iiR~He~------------~~~G~~~~~~---~~~iTvfSa~~Y~--~~~~N~~a~l~i~~~~--~~~~~~~ 289 (293)
T cd07414 229 LNKHDLDLICRAHQV------------VEDGYEFFAK---RQLVTLFSAPNYC--GEFDNAGAMMSVDETL--MCSFQIL 289 (293)
T ss_pred HHHcCCeEEEECCcc------------ccCeEEEeCC---CcEEEEecCCccc--CCCCceEEEEEECCCC--cEEEEEe
Confidence 999999999999997 5899999774 9999999999999 5689999999998764 5678877
Q ss_pred e
Q 008577 507 K 507 (561)
Q Consensus 507 ~ 507 (561)
.
T Consensus 290 ~ 290 (293)
T cd07414 290 K 290 (293)
T ss_pred c
Confidence 6
No 16
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=8.6e-65 Score=516.91 Aligned_cols=267 Identities=41% Similarity=0.718 Sum_probs=246.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHH
Q 008577 191 PVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL 270 (561)
Q Consensus 191 ~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl 270 (561)
+++++.+||++|+++|++||++++++ ++++||||||||+.+|.++|+ ..|.++.+. |||||||||||++|+||+
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDiHG~~~~l~~ll~-~~~~~~~~~-~vfLGD~VDrG~~s~e~l 75 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVS----APVTVCGDIHGQFDDLLRLFD-LNGPPPDTN-YVFLGDYVDRGPFSIEVI 75 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeC----CCEEEEEeCcCCHHHHHHHHH-HcCCCCCce-EEEeCCccCCCCChHHHH
Confidence 56789999999999999999999997 579999999999999999999 888876655 999999999999999999
Q ss_pred HHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCccc
Q 008577 271 LVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRT 350 (561)
Q Consensus 271 ~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~ 350 (561)
.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++++++++++|||||+++.
T Consensus 76 ~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~- 150 (271)
T smart00156 76 LLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD- 150 (271)
T ss_pred HHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc-
Confidence 999999999999999999999999999999999999999975 499999999999999999999999999999853
Q ss_pred CCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCC-CCCCcccccCCceeEeChhhHHHHHhH
Q 008577 351 CSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPS-SEAGLRENTKKFGLLWGPDCTEEFLKE 429 (561)
Q Consensus 351 ~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~-~~~g~~~n~RG~g~~FG~d~~~~FL~~ 429 (561)
+.++++|+++.|+. +.+.+++++|+|||||. ...+|.+|.||.|+.||++++++||++
T Consensus 151 --------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~ 209 (271)
T smart00156 151 --------------------LTTLDDIRKLKRPQ-EPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKK 209 (271)
T ss_pred --------------------cCCHHHHhcccCCC-CCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHH
Confidence 47899999999986 56678899999999995 467999999999999999999999999
Q ss_pred cCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEeeC
Q 008577 430 NHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA 508 (561)
Q Consensus 430 n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~~ 508 (561)
||+++||||||+ +++||++.|+ |+||||||||||| +.++|+||++.++.+. +++|.+|++
T Consensus 210 n~l~~iiR~He~------------~~~G~~~~~~---~~~~TvfSa~~y~--~~~~n~~a~~~i~~~~--~~~~~~~~~ 269 (271)
T smart00156 210 NNLKLIIRAHQV------------VDDGYEFFHD---RKLVTIFSAPNYC--GRFGNKAAVLKVDKDL--KLSFEQFKP 269 (271)
T ss_pred CCCeEEEecCcc------------cCCcEEEecC---CcEEEEECCcccc--cCCCceEEEEEECCCC--cEEEEEecC
Confidence 999999999997 5799999885 9999999999999 5689999999998764 788998864
No 17
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.1e-62 Score=508.19 Aligned_cols=279 Identities=36% Similarity=0.605 Sum_probs=248.3
Q ss_pred cccccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCC-------CceEEEe
Q 008577 184 KEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSD-------HRYFVFN 256 (561)
Q Consensus 184 ~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~-------~~~~VFL 256 (561)
+.....++.+++.+||++|.++|++||++++++. +++||||||||+.+|.++|+ ..|+|+. +..||||
T Consensus 15 ~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~----~~~viGDIHG~~~~L~~ll~-~~g~~~~~~~~~~~~~~~vfL 89 (311)
T cd07419 15 TDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRA----PIKIFGDIHGQFGDLMRLFD-EYGSPVTEAAGDIEYIDYLFL 89 (311)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCC----CEEEEEeccCCHHHHHHHHH-HcCCCcccccCCCcCceEEEE
Confidence 3445678899999999999999999999999974 69999999999999999999 8888754 2469999
Q ss_pred cCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhccc--chhhHHHHHHHhhcCCCceEE
Q 008577 257 GNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKK--DCKLVFDKCLECFRTLPLATI 334 (561)
Q Consensus 257 GDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~--~~~~l~~~~~~~f~~LPlaai 334 (561)
|||||||++|+||+.+|+++++.+|.++++||||||.+.++..|||..++..+|+.. .+..+|..+.++|++||++++
T Consensus 90 GDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~av 169 (311)
T cd07419 90 GDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAI 169 (311)
T ss_pred CCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhhe
Confidence 999999999999999999999999999999999999999999999999999999862 245799999999999999999
Q ss_pred eeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCC---CCccccc
Q 008577 335 IAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE---AGLRENT 411 (561)
Q Consensus 335 i~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~---~g~~~n~ 411 (561)
++++++||||||++. +.++++|+.+.|+...++...+++|+|||||... .++.+|.
T Consensus 170 i~~~~l~vHgGi~p~---------------------~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~ 228 (311)
T cd07419 170 IEDKILCMHGGIGRS---------------------INHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNA 228 (311)
T ss_pred ecccEEEEccCCCCC---------------------CCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCC
Confidence 999999999999853 4689999999998755567788999999999974 4777776
Q ss_pred ---CCce--eEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCC
Q 008577 412 ---KKFG--LLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDN 486 (561)
Q Consensus 412 ---RG~g--~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N 486 (561)
||.| +.||++++++||++||+++||||||+ +++||++.|+ |+||||||||||| +.++|
T Consensus 229 ~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~~---~~~iTvfSa~~y~--~~~~n 291 (311)
T cd07419 229 IDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFAQ---GKLITLFSATNYC--GTAGN 291 (311)
T ss_pred CCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeCC---CeEEEEecCCccc--CCCCc
Confidence 9998 69999999999999999999999997 5899999774 9999999999999 56899
Q ss_pred ceEEEEEeCCCCCCCcEEEee
Q 008577 487 VGAYAVLKPPLFDSPLFLQLK 507 (561)
Q Consensus 487 ~gA~l~l~~~~~~~~~f~~f~ 507 (561)
+||++.++.+. +.+|.+++
T Consensus 292 ~~ai~~i~~~~--~~~~~~~~ 310 (311)
T cd07419 292 AGAILVLGRDL--TIIPKLIH 310 (311)
T ss_pred eEEEEEECCCC--cEeEEEeC
Confidence 99999998765 55666553
No 18
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-61 Score=475.58 Aligned_cols=274 Identities=35% Similarity=0.603 Sum_probs=254.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH
Q 008577 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (561)
Q Consensus 188 ~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (561)
+.+.+..+..+|..|+++|.+|.|+..+.. +++||||+||||++|+++|+ ..|..++.+ |+|+|||||||++|+
T Consensus 31 k~lse~~v~~lc~~a~~~L~~e~nV~~v~~----pvtvcGDvHGqf~dl~ELfk-iGG~~pdtn-ylfmGDyvdrGy~Sv 104 (319)
T KOG0371|consen 31 KPLSEVDVSSLCLLAKEILDKEENVQPVNC----PVTVCGDVHGQFHDLIELFK-IGGLAPDTN-YLFMGDYVDRGYYSV 104 (319)
T ss_pred CCCccccchhHHHHHHHHHhcccccccccc----ceEEecCcchhHHHHHHHHH-ccCCCCCcc-eeeeeeecccccchH
Confidence 567778889999999999999999999984 59999999999999999999 777776666 999999999999999
Q ss_pred HHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcC
Q 008577 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (561)
Q Consensus 268 Evl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs 347 (561)
|++.+|.++|+.||++|.+||||||++.+.+.|||++||.+|||.. .+|+.|.+.|+.+|+.|+|++++||.|||++
T Consensus 105 etVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlfdy~P~tali~~~ifc~HGgLs 181 (319)
T KOG0371|consen 105 ETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLFDYLPLTALIESKIFCLHGGLS 181 (319)
T ss_pred HHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhhhccchHhhhccceeeccCCcC
Confidence 9999999999999999999999999999999999999999999876 6999999999999999999999999999998
Q ss_pred cccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHHH
Q 008577 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFL 427 (561)
Q Consensus 348 ~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL 427 (561)
| ++.+++.++.+.|. .+.|.++.+||||||||....||..++||+|+.||.++.++|-
T Consensus 182 p---------------------si~tld~~r~~dr~-~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn 239 (319)
T KOG0371|consen 182 P---------------------SIDTLDLIRLLDRI-QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN 239 (319)
T ss_pred c---------------------ccchHHHHHHHHHh-hcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhh
Confidence 6 45789999999995 4778889999999999999999999999999999999999999
Q ss_pred hHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEee
Q 008577 428 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLK 507 (561)
Q Consensus 428 ~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f~ 507 (561)
.+||+++|-|+||- +++||.|.|. ..++||||||||| .+.+|.+|++.++.. ....|.||+
T Consensus 240 ~~n~lslisRahql------------vm~g~nW~~~---~~~vtiFSapnyc--Yrcgn~a~i~e~d~~--~~~~f~q~~ 300 (319)
T KOG0371|consen 240 HKNGLSLISRAHQL------------VMEGYNWYHL---WNVVTIFSAPNYC--YRCGNQAAIMERDDT--KNYDFLQFD 300 (319)
T ss_pred ccCCchHhHHHHHH------------Hhcccceeee---cceeEEccCCchh--hccccHHHHhhhhhc--cCcceEEec
Confidence 99999999999995 6899999997 7788999999999 689999999998765 367899999
Q ss_pred C-CCC
Q 008577 508 A-AEK 511 (561)
Q Consensus 508 ~-~~~ 511 (561)
. |++
T Consensus 301 psp~k 305 (319)
T KOG0371|consen 301 PSPRK 305 (319)
T ss_pred CCccc
Confidence 8 544
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=5.6e-32 Score=264.98 Aligned_cols=217 Identities=40% Similarity=0.605 Sum_probs=166.3
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchh
Q 008577 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 303 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~ 303 (561)
+|||||||++.+|.++++ ..+.++.+ .+||+|||||||+.+.+++.+++.++.. |.++++|+||||.+.++..+++.
T Consensus 1 ~~igDiHg~~~~l~~~l~-~~~~~~~d-~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~ 77 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLE-KIGFPPND-KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFY 77 (225)
T ss_pred CEEeCCCCCHHHHHHHHH-HhCCCCCC-EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCc
Confidence 589999999999999999 88876554 4999999999999999999999999877 88999999999999888776655
Q ss_pred HHHH-----HHhcccchhhHHHHHHHhhcCCCceEEeec-eEEEecCCcCcccCCCccccccccccccccccCcCCHHHH
Q 008577 304 AELC-----TKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREF 377 (561)
Q Consensus 304 ~E~~-----~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I 377 (561)
.+.. ..........++..+.++|..||++..++. +++|||||+++... ....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~---------------------~~~~~ 136 (225)
T cd00144 78 DEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLP---------------------LEEQI 136 (225)
T ss_pred chhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccc---------------------hHHhh
Confidence 4321 001111134578889999999999999876 99999999976431 11111
Q ss_pred HhhcccccCCCCccccccccccCCCCCCCccccc-CCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCcccccc
Q 008577 378 AKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLN 456 (561)
Q Consensus 378 ~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~-RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~ 456 (561)
. ..+......+++|++|.......... |+. |+.+++.|++.++.+.|||||++ +..
T Consensus 137 ~-------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~------------~~~ 193 (225)
T cd00144 137 K-------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP------------VEE 193 (225)
T ss_pred h-------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc------------ccC
Confidence 1 12234567799999998655433333 444 99999999999999999999997 356
Q ss_pred CceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEE
Q 008577 457 GYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAV 492 (561)
Q Consensus 457 Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~ 492 (561)
|+.+.+ .+++|||+|++.|+ +..+|..+.+.
T Consensus 194 ~~~~~~---~~~~i~IDtg~~~~--~~~~~~l~~~~ 224 (225)
T cd00144 194 GYEFGH---DGNLITIDSGCNYC--GGGGNKLAALV 224 (225)
T ss_pred ccEEcC---CCCEEEEecCCccc--CCCCccEEEEe
Confidence 664333 48999999999998 45677776654
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.91 E-value=6.6e-24 Score=213.51 Aligned_cols=126 Identities=21% Similarity=0.414 Sum_probs=98.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCC--------CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFP--------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p--------~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
++++||||||||++.|.++++ +.++. +.+.++|||||||||||+|.|||.+|+.+. .+.++++||||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~-~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTE-KLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHH-HcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccH
Confidence 478999999999999999999 87764 234569999999999999999999999884 4568999999999
Q ss_pred ccccccccc-------hhHHHHHHhccc---chhhHHHHHHHhhcCCCceEEee-ceEEEecCCcCcc
Q 008577 293 TKNCTLAYG-------FWAELCTKFGKK---DCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (561)
Q Consensus 293 ~~~~n~~yG-------F~~E~~~ky~~~---~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGIs~~ 349 (561)
.++++...+ ...+....|... ....+++.+.++|++||++..+. ++++|||||+.+.
T Consensus 78 ~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 78 NKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 887654321 112233344321 12357788999999999998764 6799999999753
No 21
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.88 E-value=9e-22 Score=196.40 Aligned_cols=124 Identities=23% Similarity=0.401 Sum_probs=97.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCC---------CceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSD---------HRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~---------~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNH 291 (561)
+|+.||||||||+.+|+++|+ ..++... .+.+||||||||||++|.||+.+|+.++. +.+++++||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~-~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLE-KLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHH-HcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCc
Confidence 479999999999999999999 8776532 34699999999999999999999998863 34799999999
Q ss_pred ccccccccc--------chhHHHHHHhcccchhhHHHHHHHhhcCCCceEEee-ceEEEecCCcCcc
Q 008577 292 ETKNCTLAY--------GFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (561)
Q Consensus 292 E~~~~n~~y--------GF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGIs~~ 349 (561)
|.++++... |+. +....|... ...+.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 78 E~~l~~~~~~~~~~~~~~~~-~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 78 DNKLYRKLQGRNVKITHGLE-ETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHHhcCCCccccCccc-chHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 998765432 222 222333322 3457788999999999987765 5799999998743
No 22
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.88 E-value=3.1e-22 Score=196.98 Aligned_cols=184 Identities=19% Similarity=0.224 Sum_probs=124.6
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCC-------CCCceEEEecCccccCCChHHHHHHHHHhccc---CCCeEEEecccccc
Q 008577 224 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVL---MPHRVYLLRGNHET 293 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p-------~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~---~P~~V~lLRGNHE~ 293 (561)
+||||||||+..|.++++ ..+.. .....+||+|||||||+++.||+.+|+.++.. .+.++++|+||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~-~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILK-GAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHH-HCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 589999999999999999 77642 33456999999999999999999999998743 45789999999999
Q ss_pred cccccccchh--HHHHHHhcc-cchhhHH---HHHHHhhcCCCceEEeeceEEEecCCcCcccCCCcccccccccccccc
Q 008577 294 KNCTLAYGFW--AELCTKFGK-KDCKLVF---DKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLD 367 (561)
Q Consensus 294 ~~~n~~yGF~--~E~~~ky~~-~~~~~l~---~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~ 367 (561)
+.++..+.+. .+....... .....++ ..+.+|++.+|+...++ ++++||||+++-+.
T Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~w~---------------- 142 (208)
T cd07425 80 MNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPLWY---------------- 142 (208)
T ss_pred HHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHHHh----------------
Confidence 9887543322 111111100 0011122 34578999999998765 68889999843210
Q ss_pred ccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCC
Q 008577 368 TLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTG 447 (561)
Q Consensus 368 ~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~ 447 (561)
|.. +.|.... .-|+..+.++|+.++.++||+||+.+
T Consensus 143 --------------r~y--------------~~~~~~~-----------~~~~~~~~~~l~~~~~~~iv~GHTh~----- 178 (208)
T cd07425 143 --------------RGY--------------SKETSDK-----------ECAAAHLDKVLERLGAKRMVVGHTPQ----- 178 (208)
T ss_pred --------------hHh--------------hhhhhhc-----------cchHHHHHHHHHHcCCCeEEEcCeee-----
Confidence 000 0000000 00125688999999999999999973
Q ss_pred CCCccccccCceecccCCCCeEEEEeC-CCCCC
Q 008577 448 ADDARNMLNGYSKDHDTVSGELYTLFT-APNYP 479 (561)
Q Consensus 448 r~~~~~~~~Gy~~~h~~~~gklITVFS-ApnY~ 479 (561)
+.|+.... +|++|+|.+ ++..+
T Consensus 179 -------~~~~~~~~---~g~~i~ID~g~~~~~ 201 (208)
T cd07425 179 -------EGGIVTFC---GGKVIRIDVGMSKGV 201 (208)
T ss_pred -------ecCceEEE---CCEEEEEeCCcchhh
Confidence 44443223 599999997 44433
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.85 E-value=3.2e-21 Score=197.43 Aligned_cols=122 Identities=23% Similarity=0.324 Sum_probs=96.4
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~y 300 (561)
|+++||||||||+..|.++++ +.++.+..+.+||+||||||||+|.||+.+|..+ +.++++++||||.+++...+
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~-~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~ 75 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLE-KIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAA 75 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHH-hcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhc
Confidence 579999999999999999999 8876544556999999999999999999999977 34799999999998877666
Q ss_pred chhH----HHHHHhcccchhhHHHHHHHhhcCCCceEEe-eceEEEecCCcCccc
Q 008577 301 GFWA----ELCTKFGKKDCKLVFDKCLECFRTLPLATII-AQGVYTTHGGLFRRT 350 (561)
Q Consensus 301 GF~~----E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii-~~~il~vHGGIs~~~ 350 (561)
|+.. .....+-. ....+.+.+|++.+|+...+ .+++++||||+++..
T Consensus 76 g~~~~~~~~~l~~~l~---~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 76 GIKRNKKKDTLDPILE---APDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred CCccccchhHHHHHHc---cccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 6431 11111111 12456688999999998765 568999999998754
No 24
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.85 E-value=1.8e-21 Score=198.70 Aligned_cols=122 Identities=24% Similarity=0.322 Sum_probs=98.6
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~y 300 (561)
|+++||||||||++.|.++|+ +.++.+..+.++|+||+|||||+|+||+.++.++. +++++++||||.++++..+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~-~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~ 75 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLE-RVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFA 75 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHH-HhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhc
Confidence 468999999999999999999 88876555669999999999999999999998874 4688999999999988777
Q ss_pred chh-----HHHHHHhcccchhhHHHHHHHhhcCCCceEEee-ceEEEecCCcCcccC
Q 008577 301 GFW-----AELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRRTC 351 (561)
Q Consensus 301 GF~-----~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGIs~~~~ 351 (561)
|+. +.+...+. ....+.+.+|++.+|+..... .++++|||||+|..+
T Consensus 76 g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 76 GISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 752 12222222 235678899999999986543 469999999998763
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.85 E-value=2.1e-21 Score=196.98 Aligned_cols=120 Identities=23% Similarity=0.311 Sum_probs=96.0
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccch
Q 008577 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGF 302 (561)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF 302 (561)
++||||||||+..|+++++ +.++.+..+.+||+||||||||+|+||+.+|..++ .++++++||||.++++..+|+
T Consensus 1 ~yvIGDIHG~~~~L~~LL~-~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~ 75 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLE-KINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGI 75 (257)
T ss_pred CEEEECCCCCHHHHHHHHH-hcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCc
Confidence 5899999999999999999 88876555669999999999999999999999885 479999999999988766664
Q ss_pred hHH----HHHHhcccchhhHHHHHHHhhcCCCceEEeec-eEEEecCCcCccc
Q 008577 303 WAE----LCTKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRT 350 (561)
Q Consensus 303 ~~E----~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGIs~~~ 350 (561)
... ....+- .....+.+.+|++++|++..+++ ++++|||||+|..
T Consensus 76 ~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 76 KKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW 125 (257)
T ss_pred cccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC
Confidence 311 111111 11234678899999999987764 8999999998764
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.84 E-value=7.2e-21 Score=188.22 Aligned_cols=127 Identities=20% Similarity=0.245 Sum_probs=93.7
Q ss_pred eeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 213 VKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 213 v~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
..+.....++++||||||||+..|+++|+ ..++.+..+.+|||||||||||+|.||+.+|... ++++++||||
T Consensus 9 ~~~~~~~~~ri~vigDIHG~~~~L~~lL~-~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE 81 (218)
T PRK11439 9 QRIAGHQWRHIWLVGDIHGCFEQLMRKLR-HCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHE 81 (218)
T ss_pred ecccCCCCCeEEEEEcccCCHHHHHHHHH-hcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchH
Confidence 34554455799999999999999999999 8877544556999999999999999999998652 5789999999
Q ss_pred ccccccccchhHHHHH--------HhcccchhhHHHHHHHhhcCCCceEEee---ceEEEecCCcC
Q 008577 293 TKNCTLAYGFWAELCT--------KFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 347 (561)
Q Consensus 293 ~~~~n~~yGF~~E~~~--------ky~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGIs 347 (561)
.++++...+-....+. .+... ....+..+.++++.||+...+. +++++||||++
T Consensus 82 ~~~l~~~~~~~~~~w~~~gg~~~~~l~~~-~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 82 QMALDALASQQMSLWLMNGGDWFIALTDN-QQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHHCCccchhhhCCChhhhhcchh-hhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 9887643211101111 11111 2235566779999999986553 57999999985
No 27
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.84 E-value=9.4e-21 Score=188.17 Aligned_cols=118 Identities=26% Similarity=0.344 Sum_probs=90.9
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCC-------CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccccc
Q 008577 224 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC 296 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p-------~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~ 296 (561)
+||||||||++.|.++++ ..++. +....+|||||||||||+|.||+.+|+.+.. +.++++|+||||.+++
T Consensus 2 ~vIGDIHG~~~~L~~lL~-~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll 78 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLH-KLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAI 78 (222)
T ss_pred EEEEeccCCHHHHHHHHH-HcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHH
Confidence 699999999999999999 77654 1234699999999999999999999999853 4589999999999876
Q ss_pred ccccc------------h-----hHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcC
Q 008577 297 TLAYG------------F-----WAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (561)
Q Consensus 297 n~~yG------------F-----~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs 347 (561)
....+ . ..+....++. ..++++.+.+||+.||++... +++++||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43211 0 0122233322 234668899999999998764 67999999985
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.83 E-value=6.5e-20 Score=188.07 Aligned_cols=74 Identities=31% Similarity=0.415 Sum_probs=62.8
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCC-----CCCCceEEEecCccccCCChHHHHHHHHHhcccCCC-eEEEecccccccc
Q 008577 222 EVIVVGDILGQFHDLVALFEENAGF-----PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPH-RVYLLRGNHETKN 295 (561)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~-----p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~-~V~lLRGNHE~~~ 295 (561)
++++|||||||++.|.++|+ .... +.....+||||||||||++|.+|+.+|++++..+|. ++++|+||||.++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~-~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWL-NLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred eEEEEEeccCCHHHHHHHHH-HhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 69999999999999999998 4321 122346999999999999999999999999988875 6889999999765
Q ss_pred c
Q 008577 296 C 296 (561)
Q Consensus 296 ~ 296 (561)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 4
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.83 E-value=3.3e-20 Score=181.69 Aligned_cols=121 Identities=24% Similarity=0.245 Sum_probs=93.8
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~y 300 (561)
++++||||||||+..|.++++ ..++....+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~-~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~ 73 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALD-AVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALR 73 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHH-HcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhh
Confidence 479999999999999999999 777654455699999999999999999998865 2689999999999887654
Q ss_pred c--hhHHHHHHhcccc-----hhhHHHHHHHhhcCCCceEEee---ceEEEecCCcCc
Q 008577 301 G--FWAELCTKFGKKD-----CKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFR 348 (561)
Q Consensus 301 G--F~~E~~~ky~~~~-----~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGIs~ 348 (561)
+ +..+.+.+++... ...+++...+||+.||+...+. .++++||||+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~ 131 (207)
T cd07424 74 AEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPS 131 (207)
T ss_pred CCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCc
Confidence 4 2233333333221 1225666888999999998765 479999999864
No 30
>PHA02239 putative protein phosphatase
Probab=99.81 E-value=8.6e-20 Score=183.04 Aligned_cols=125 Identities=19% Similarity=0.273 Sum_probs=91.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCC-CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFP-SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA 299 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p-~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~ 299 (561)
|++++|||||||+..|.++++ ..... .....+||+|||||||+.|.+++.+|+.+. ..+.++++|+||||.+++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~-~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~ 78 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMD-KINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIM 78 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHH
Confidence 579999999999999999998 65322 123459999999999999999999999875 345689999999999865421
Q ss_pred cc--------------hhHHHHHHhcccch---------------------------hhHHHHHHHhhcCCCceEEeece
Q 008577 300 YG--------------FWAELCTKFGKKDC---------------------------KLVFDKCLECFRTLPLATIIAQG 338 (561)
Q Consensus 300 yG--------------F~~E~~~ky~~~~~---------------------------~~l~~~~~~~f~~LPlaaii~~~ 338 (561)
.+ ...+....|+.... ...+..+..|++.||++.. .++
T Consensus 79 ~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~ 157 (235)
T PHA02239 79 ENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDK 157 (235)
T ss_pred hCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECC
Confidence 10 11234456642210 1234566779999999866 467
Q ss_pred EEEecCCcCc
Q 008577 339 VYTTHGGLFR 348 (561)
Q Consensus 339 il~vHGGIs~ 348 (561)
++|||||+.+
T Consensus 158 ~ifVHAGi~p 167 (235)
T PHA02239 158 YIFSHSGGVS 167 (235)
T ss_pred EEEEeCCCCC
Confidence 9999999964
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.78 E-value=9.5e-19 Score=173.37 Aligned_cols=128 Identities=20% Similarity=0.229 Sum_probs=91.4
Q ss_pred ceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccc
Q 008577 212 CVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 212 lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNH 291 (561)
+.++.....+|++||||||||+..|+++++ ...+....+.+||+||||||||+|.||+.+|.. .+++.+||||
T Consensus 6 ~~~~~~~~~~ri~visDiHg~~~~l~~~l~-~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNH 78 (218)
T PRK09968 6 YQKINAHHYRHIWVVGDIHGEYQLLQSRLH-QLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNH 78 (218)
T ss_pred eeeccCCCCCeEEEEEeccCCHHHHHHHHH-hcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECch
Confidence 334554445699999999999999999999 777554455699999999999999999998854 2688999999
Q ss_pred cccccccccchhHHHH--------HHhcccchhhHHHHHHHhhcCCCceEEee---ceEEEecCCcC
Q 008577 292 ETKNCTLAYGFWAELC--------TKFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 347 (561)
Q Consensus 292 E~~~~n~~yGF~~E~~--------~ky~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGIs 347 (561)
|.+++....+-....+ ...... ..........+++.||+...+. .++++||||++
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~-~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDS-EQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHH-HHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 9988753211000011 111111 1223445567999999987653 46899999985
No 32
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=99.59 E-value=3.7e-15 Score=129.86 Aligned_cols=93 Identities=20% Similarity=0.362 Sum_probs=65.3
Q ss_pred HHHHhhhhhhhhhhhHhhhhhhhhhhhhccchhhhhhcCCCcccccCC--CCCCCCCCCCCCCCCHHHHHHHHHHhhhcC
Q 008577 102 LRSACNIVSKQRVFDSSLQGLLEELQVEVGSTMRERLVGGKLENLTKE--QDTLPLSWPRNGRISLEWIQLLISTFKWSS 179 (561)
Q Consensus 102 ~~~~c~ki~k~~~Fe~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~p~l~~P~~~~~t~~~i~~l~~~f~~~~ 179 (561)
+..+|.|++|+++||+||++ ++.+.++.+++ +++++.++ |+||++ +++.+|.+|+.+|+++||.+
T Consensus 1 Kl~ec~k~ir~~~FekAI~~--d~~~~s~~e~~-------d~~~i~Ve~sY~GP~l---~~~~it~efv~~mie~FK~~- 67 (95)
T PF08321_consen 1 KLKECEKLIRRIAFEKAIAV--DEEKKSVSESI-------DLESIDVEDSYDGPRL---EDEPITLEFVKAMIEWFKNQ- 67 (95)
T ss_dssp HHHHHHHHHHHHHHSHHHHH--HHHHHSTTTS--------TTSTT---SS--SS-----BTTB--HHHHHHHHHHHHCT-
T ss_pred CHHHHHHHHHHHHHHHHhcc--CCcccCHHHhc-------CccceecCCCCCCCCC---CCCCCCHHHHHHHHHHHHhC-
Confidence 46799999999999999999 33334444444 55555555 599999 45569999999999999976
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHHHHhcCCceee
Q 008577 180 WKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKL 215 (561)
Q Consensus 180 ~~~~~~~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i 215 (561)
+.||.+|+.+|+.+|.++|+++||+++|
T Consensus 68 --------K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 68 --------KKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp ------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred --------CCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 5699999999999999999999999986
No 33
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.46 E-value=7.2e-15 Score=157.42 Aligned_cols=326 Identities=16% Similarity=0.016 Sum_probs=240.7
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCceeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCC
Q 008577 186 FRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW 265 (561)
Q Consensus 186 ~~~~L~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~ 265 (561)
....|+...+..++.-+.+++..+||+..+.....--.+.++|.||++.|+.+.++ .. |....-|++-|++++++.+
T Consensus 11 an~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie-~d--P~~~K~Y~rrg~a~m~l~~ 87 (476)
T KOG0376|consen 11 ANEALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIE-LD--PTYIKAYVRRGTAVMALGE 87 (476)
T ss_pred HhhhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhh-cC--chhhheeeeccHHHHhHHH
Confidence 33456677888999999999999999999876533457899999999999999998 33 6667779999999999999
Q ss_pred hHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCC
Q 008577 266 GLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGG 345 (561)
Q Consensus 266 SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGG 345 (561)
..+.+..|...+...|+...+.|++||+..+...++|..++...++.. +..++..+...+.. |++..+.+.++=-| -
T Consensus 88 ~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~-k 164 (476)
T KOG0376|consen 88 FKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH-K 164 (476)
T ss_pred HHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-h
Confidence 999999999999999999999999999999999999999998888665 33444433333332 14434443333222 1
Q ss_pred cCcccCCCccccccccccccccccCcCCHHH-HHhhcccccCCC-CccccccccccCCCCCCCccccc-CCceeEeChhh
Q 008577 346 LFRRTCSASTQCSTGEKRQKLDTLSLGSLRE-FAKVNRFLEDVP-ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDC 422 (561)
Q Consensus 346 Is~~~~l~P~~~~~~~~~~~~~~~~l~sl~~-I~~i~R~~~~p~-~~~l~~DlLWSDP~~~~g~~~n~-RG~g~~FG~d~ 422 (561)
+.... +.-. ....+...........++.. ..++.+. ++++ +-....+..||+|....|...+. ++.+..++|+.
T Consensus 165 vt~e~-vk~~-~~~~~~~~~L~~k~a~~i~~~~~~~~~~-l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~ 241 (476)
T KOG0376|consen 165 VTLEF-VKTL-MEVFKNQKKLPKKYAYSILDLAKTILRK-LPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSE 241 (476)
T ss_pred hhHHH-HHHH-HHhhhcccccccccceeeHHHHhhHHhc-CCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCC
Confidence 11000 0000 00000000011111223332 2333332 2333 22367799999999988877777 99999999999
Q ss_pred HHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCC----CCCCc-eEEEEEeCCC
Q 008577 423 TEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVD----GFDNV-GAYAVLKPPL 497 (561)
Q Consensus 423 ~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~----~~~N~-gA~l~l~~~~ 497 (561)
+..||.+.++.-+++.|..++.+..+.++..+..+|..-|+.+++.++|+|+++.++... .++|. +++..+--..
T Consensus 242 t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~ 321 (476)
T KOG0376|consen 242 TNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAH 321 (476)
T ss_pred cccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchh
Confidence 999999999999999999999888899998899999988877889999999999999642 56677 7888876566
Q ss_pred CCCCcEEEeeC--CCCCCCCCcccc
Q 008577 498 FDSPLFLQLKA--AEKPEVPPYDVF 520 (561)
Q Consensus 498 ~~~~~f~~f~~--~~~~~~p~~~~~ 520 (561)
.....|...++ |+|.-.+++|+-
T Consensus 322 ~i~~~~~~~hgglf~~~~v~l~d~r 346 (476)
T KOG0376|consen 322 LINNKVLVMHGGLFSPDGVTLEDFR 346 (476)
T ss_pred hhcCceEEEecCcCCCCCccHHHHH
Confidence 67788999999 999888888753
No 34
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.20 E-value=1e-10 Score=103.66 Aligned_cols=79 Identities=23% Similarity=0.332 Sum_probs=56.8
Q ss_pred CceEEEecCCCCHHHH---HHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHH--HHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQFHDL---VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVL--LAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL---~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL--~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+||.++||+||..... ...+....... ....+|++||++|+|..+.+..... .......+..+++++||||...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~-~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN-KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYS 79 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT-TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC-CCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccce
Confidence 3799999999999987 33333122223 3345999999999999998877765 4444566678999999999987
Q ss_pred ccccc
Q 008577 296 CTLAY 300 (561)
Q Consensus 296 ~n~~y 300 (561)
....+
T Consensus 80 ~~~~~ 84 (200)
T PF00149_consen 80 GNSFY 84 (200)
T ss_dssp HHHHH
T ss_pred ecccc
Confidence 65433
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.90 E-value=6.5e-08 Score=89.78 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=47.6
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
++.++||+||+...+.++++ .... . +.+|++||++++|+.+. + .....+++++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~-~~~~--~-d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALE-LFGD--V-DLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHH-HhcC--C-CEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcC
Confidence 48899999999999999998 6543 3 35999999999998765 1 12336899999999754
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=98.86 E-value=8.9e-09 Score=98.86 Aligned_cols=69 Identities=17% Similarity=0.278 Sum_probs=53.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCC--------hHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW--------GLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~--------SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
||+.|+||+||++..+.++++ .......+ .++++||++|+|+. +.+++..|..+ ...+++++||||
T Consensus 1 mri~viSD~Hg~~~~~~~~l~-~~~~~~~d-~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD 74 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALE-LFAQSGAD-WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCD 74 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHH-HHHhcCCC-EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCc
Confidence 579999999999999999888 55333334 59999999999873 45666666543 236999999999
Q ss_pred ccc
Q 008577 293 TKN 295 (561)
Q Consensus 293 ~~~ 295 (561)
...
T Consensus 75 ~~~ 77 (182)
T PRK09453 75 SEV 77 (182)
T ss_pred chh
Confidence 744
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.74 E-value=8.9e-08 Score=87.80 Aligned_cols=61 Identities=30% Similarity=0.508 Sum_probs=44.8
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
|||.++||+|++...+.++++ ... . ...+|++||++|+ .+++..+..+ .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~-~~~--~-~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLE-YIN--E-PDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHH-HHT--T-ESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHH-Hhc--C-CCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 589999999999999999999 662 2 3459999999993 7777777554 6999999999644
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.69 E-value=2.4e-08 Score=89.28 Aligned_cols=145 Identities=31% Similarity=0.401 Sum_probs=109.9
Q ss_pred cccccchhHHHHHHhcccchhhHHHH---HHHhhcCCCceEEeec-eEEEecCCcCcccCCCccccccccccccccccCc
Q 008577 296 CTLAYGFWAELCTKFGKKDCKLVFDK---CLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSL 371 (561)
Q Consensus 296 ~n~~yGF~~E~~~ky~~~~~~~l~~~---~~~~f~~LPlaaii~~-~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l 371 (561)
++..+|+..++..+++.. ..|.. +.++|+.||+.+++.. .++|.|||+++.. .
T Consensus 3 l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~--------------------~ 59 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL--------------------D 59 (155)
T ss_pred hhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch--------------------h
Confidence 455678888877777642 23555 8999999999999888 8999999998642 1
Q ss_pred CCHHHHHhhccccc-CCCCccccccccccCCCC--CCCcccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCC
Q 008577 372 GSLREFAKVNRFLE-DVPENDLLSDVLWSDPSS--EAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGA 448 (561)
Q Consensus 372 ~sl~~I~~i~R~~~-~p~~~~l~~DlLWSDP~~--~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r 448 (561)
..++++..+.|... .....+.+.+.+|++|.. ...|.++.+|.+..| ++.+..|+..+..+.+.|+|+.
T Consensus 60 ~~~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~------- 131 (155)
T COG0639 60 RLLDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVL------- 131 (155)
T ss_pred hhHHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEE-------
Confidence 35666666655431 334566777779999885 578888889998888 8899999988888889999996
Q ss_pred CCccccccCceecccCCCCeEEEEeCCCCCC
Q 008577 449 DDARNMLNGYSKDHDTVSGELYTLFTAPNYP 479 (561)
Q Consensus 449 ~~~~~~~~Gy~~~h~~~~gklITVFSApnY~ 479 (561)
...++...+. +..+|.||+++|+
T Consensus 132 -----~~~d~~~~~~---~~~lt~~~~~~~~ 154 (155)
T COG0639 132 -----YDIDTGAVFG---GGLLTAFSAPNYC 154 (155)
T ss_pred -----EecCceEEeC---CCeeeEEeccccc
Confidence 3556665541 2999999999997
No 39
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.50 E-value=3.5e-07 Score=85.68 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=47.5
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
|++.|++|+||++..+..+++ .....+..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~-~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVE-LFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHH-HHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 579999999999988776666 444432334599999998 457777765542 2589999999973
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.50 E-value=1.2e-06 Score=88.66 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=72.5
Q ss_pred ceEEEecCCCCHHHHH-HHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccc-
Q 008577 222 EVIVVGDILGQFHDLV-ALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA- 299 (561)
Q Consensus 222 ~i~VIGDIHG~~~dL~-~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~- 299 (561)
+|.++|||||++.... +.++ ..+ . +.+|+.||+++ .+.+++..|..+ +..++.++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~-~~~---p-D~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH-LLQ---P-DLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh-ccC---C-CEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCccccccccc
Confidence 5899999999987643 3343 221 2 35999999986 457777776654 2358999999998553210
Q ss_pred --c-----------------c------------------------hh-HHHHHHhcccchhhHHHHHHHhhcCCCceEEe
Q 008577 300 --Y-----------------G------------------------FW-AELCTKFGKKDCKLVFDKCLECFRTLPLATII 335 (561)
Q Consensus 300 --y-----------------G------------------------F~-~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii 335 (561)
+ + +. .++...|+.. ...+.+..++++++.+...
T Consensus 70 ~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~---s~~eA~~~ive~~~~~~~~ 146 (238)
T cd07397 70 KKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVI---SLEESAQRIIAAAKKAPPD 146 (238)
T ss_pred chHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCC---CHHHHHHHHHHHhhhcCCC
Confidence 0 0 11 2566666533 4566667777777533333
Q ss_pred eceEEEecCCcCc
Q 008577 336 AQGVYTTHGGLFR 348 (561)
Q Consensus 336 ~~~il~vHGGIs~ 348 (561)
...||+.|+++.-
T Consensus 147 ~~~VliaH~~~~G 159 (238)
T cd07397 147 LPLILLAHNGPSG 159 (238)
T ss_pred CCeEEEeCcCCcC
Confidence 4589999999853
No 41
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.45 E-value=1.9e-06 Score=78.60 Aligned_cols=61 Identities=16% Similarity=0.370 Sum_probs=40.5
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH--HHHHHHHHhcccCCCeEEEeccccccc
Q 008577 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--Evl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
++.++||+||++. .+. .+. ...+|++||++++|..+. +.+.++..++ .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~----~~~----~~~-~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----TIS----IPD-GDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----cCc----CCC-CCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 4889999999987 222 122 335999999999987542 2344444332 22 367899999964
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.29 E-value=1e-05 Score=76.42 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=44.5
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCCh-HHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-lEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
|.++|||||++..+.. . ....... +.+|+.||++++|... .+.+..|.. .+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~-~~~~~~~-D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--I-ILKAEEA-DAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--H-HhhccCC-CEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998877 2 2222223 3599999999999763 333333322 2446999999999743
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.27 E-value=5.8e-06 Score=71.82 Aligned_cols=67 Identities=31% Similarity=0.450 Sum_probs=48.4
Q ss_pred EEEecCCCCHHHHHHHH--HHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 224 IVVGDILGQFHDLVALF--EENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il--~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
+++||+|+......... . ..... ....+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~-~~~~~-~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAA-LAAAE-KPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHH-Hhccc-CCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37899999999888764 2 12222 23459999999999998877766533333345567999999999
No 44
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.25 E-value=2.2e-06 Score=85.96 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=55.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
++|.+++||||++..|.++++ .......+ .+|++||++++|+..-++..++-.+.. .+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~-~~~~~~~D-~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVG-LAPETGAD-AIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHH-HHhhcCCC-EEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 689999999999999999998 55333334 499999999999767677666655542 223689999999975
No 45
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.03 E-value=0.00018 Score=69.55 Aligned_cols=59 Identities=22% Similarity=0.309 Sum_probs=41.3
Q ss_pred ceEEEecCC-CCHH-----HHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 222 EVIVVGDIL-GQFH-----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 222 ~i~VIGDIH-G~~~-----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
+|.||+|+| |.-. .+.++++ . ... ..++++||+++ .+++.+|..+. + .++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~-~---~~~-d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLV-P---GKI-QHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhc-c---CCC-CEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 378999999 6543 3555555 2 222 35999999987 67777775542 2 589999999963
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.90 E-value=4.3e-05 Score=76.77 Aligned_cols=71 Identities=11% Similarity=0.180 Sum_probs=46.9
Q ss_pred CceEEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEecCcccc-------CCChHHHHHHHHHhcccCCCeEEEe
Q 008577 221 SEVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDK-------GSWGLEVLLVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 221 ~~i~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDR-------G~~SlEvl~lL~~Lk~~~P~~V~lL 287 (561)
|++++++|+|... ..+.+.++ ... . ..+.++++||++|. .+...+++..|..++. .+-.++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~-~~~-~-~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v 76 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLR-GEA-R-QADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFM 76 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHH-hhh-c-cCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEE
Confidence 5799999999542 23555554 221 1 22359999999985 2334566777766652 22479999
Q ss_pred cccccccc
Q 008577 288 RGNHETKN 295 (561)
Q Consensus 288 RGNHE~~~ 295 (561)
+||||...
T Consensus 77 ~GNHD~~~ 84 (241)
T PRK05340 77 HGNRDFLL 84 (241)
T ss_pred eCCCchhh
Confidence 99999643
No 47
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.84 E-value=0.00052 Score=66.39 Aligned_cols=65 Identities=11% Similarity=0.194 Sum_probs=43.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
++|.|++|+||...+..+..+ .......+ .+|.+||++..+... . +......+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~-~~~~~~~d-~vih~GD~~~~~~~~-----~---l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALK-IFNLEKVD-AVIHAGDSTSPFTLD-----A---LEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHH-HhhhcCCC-EEEECCCcCCccchH-----H---hhcccccceEEEEccCCCcc
Confidence 689999999999965444444 33333333 499999999866532 1 11112457999999998754
No 48
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.79 E-value=0.001 Score=65.89 Aligned_cols=69 Identities=19% Similarity=0.142 Sum_probs=39.6
Q ss_pred ceEEEecCCCCH----HHHH----HHHHHhcCCCCCCceEEEecCccccCCChH--HHHH-HHHHhcccCCCeEEEeccc
Q 008577 222 EVIVVGDILGQF----HDLV----ALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLL-VLLAWKVLMPHRVYLLRGN 290 (561)
Q Consensus 222 ~i~VIGDIHG~~----~dL~----~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--Evl~-lL~~Lk~~~P~~V~lLRGN 290 (561)
++.++||+|-.. ..+. .+.+ .......+ .+|++||++|.|.... +.+. .+-.|. ..+-.++.++||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~-~~~~~~~d-~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GN 78 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVD-NAEALNIA-FVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGN 78 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHH-HHHHcCCC-EEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCC
Confidence 588999999522 2232 2333 22222223 4999999999998432 2222 222222 122348899999
Q ss_pred ccc
Q 008577 291 HET 293 (561)
Q Consensus 291 HE~ 293 (561)
||.
T Consensus 79 HD~ 81 (214)
T cd07399 79 HDL 81 (214)
T ss_pred Ccc
Confidence 994
No 49
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.78 E-value=2.1e-05 Score=74.01 Aligned_cols=68 Identities=22% Similarity=0.125 Sum_probs=46.5
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
+.+++|||+....+...+.+....+. .+.++++||+++++....... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~-~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPD-ADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCC-CCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 46899999998777665520222233 345999999999987765544 22222 3345799999999986
No 50
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.77 E-value=4.8e-05 Score=74.39 Aligned_cols=71 Identities=25% Similarity=0.255 Sum_probs=49.7
Q ss_pred CceEEEecCCCCHH----HHHHHHHHhcCCCCCCceEEEecCccccCCChH-HHHHHHHHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQFH----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-EVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~~~----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-Evl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
.++.+++|+|+... .+.++++ .......+ .+++.||++|.+.... +...++..+. .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~-~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVE-KINALKPD-LVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHH-HHhccCCC-EEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 57999999998743 5666666 43322233 5999999999988775 4444444443 3456999999999754
No 51
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.74 E-value=0.00015 Score=74.43 Aligned_cols=71 Identities=13% Similarity=0.057 Sum_probs=49.1
Q ss_pred CCceEEEecCCCC----HHHHHHHHHHhcCCCCCCceEEEecCccccC--CChHHHHHHHHHhcccCCCeEEEecccccc
Q 008577 220 DSEVIVVGDILGQ----FHDLVALFEENAGFPSDHRYFVFNGNYVDKG--SWGLEVLLVLLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 220 ~~~i~VIGDIHG~----~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG--~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~ 293 (561)
+.+|..++|+|.. ...+.++++ .......+ .+++.|||+|++ ....+....|..|+... .+|.+.||||.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~-~i~~~~pD-lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIA-LGIEQKPD-LILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHH-HHHhcCCC-EEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCc
Confidence 4789999999976 455677776 43333333 599999999954 23334555666665433 49999999997
Q ss_pred c
Q 008577 294 K 294 (561)
Q Consensus 294 ~ 294 (561)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 52
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.66 E-value=0.0003 Score=64.35 Aligned_cols=55 Identities=20% Similarity=0.209 Sum_probs=38.7
Q ss_pred EEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 225 VVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 225 VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
|++|+||....+.++.. . ....+ .++++||+. .+++..+..++ ...++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~-~--~~~~d-~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 2 VISDTESPALYSPEIKV-R--LEGVD-LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred eeccccCccccchHHHh-h--CCCCC-EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 79999999887777666 3 23333 499999983 34455555441 224889999999
No 53
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.64 E-value=0.00039 Score=63.55 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=27.3
Q ss_pred eEEEecCccccCCCh-H-HHHHHHHHhcccCCCeEEEecccccc
Q 008577 252 YFVFNGNYVDKGSWG-L-EVLLVLLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 252 ~~VFLGDyVDRG~~S-l-Evl~lL~~Lk~~~P~~V~lLRGNHE~ 293 (561)
.++++||+++.|... . +...++-.++... ..+++++||||.
T Consensus 38 ~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 38 LVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 499999999998752 1 2233333343221 369999999996
No 54
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.36 E-value=0.00038 Score=69.76 Aligned_cols=68 Identities=15% Similarity=0.098 Sum_probs=46.8
Q ss_pred ceEEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 222 EVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 222 ~i~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
+|.+++|+|+.+ ..|.++++ .......+ .+|+.||++++++.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~-~~~~~~~d-~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQ-YLKKQKID-HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHH-HHHhcCCC-EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 488999999753 22455555 34333333 4999999999877666666655543 234699999999974
No 55
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.25 E-value=0.00077 Score=64.30 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=27.3
Q ss_pred eEEEecCccccCCCh--HHHHHH-HHHhcccCCCeEEEecccccccc
Q 008577 252 YFVFNGNYVDKGSWG--LEVLLV-LLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 252 ~~VFLGDyVDRG~~S--lEvl~l-L~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
.+|++||+++....+ .+.... ++.+ ...+-.+++++||||...
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 499999999865433 222221 1222 234457999999999754
No 56
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.25 E-value=0.0011 Score=66.16 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=41.4
Q ss_pred EEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEecCccccC-----CC--hHHHHHHHHHhcccCCCeEEEeccc
Q 008577 224 IVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKG-----SW--GLEVLLVLLAWKVLMPHRVYLLRGN 290 (561)
Q Consensus 224 ~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-----~~--SlEvl~lL~~Lk~~~P~~V~lLRGN 290 (561)
++++|+|... ..+.+.+.+... ..+.++++||++|.. +. ..++...|..|+. .+..++++.||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~---~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GN 77 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEAR---KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGN 77 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhc---cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCC
Confidence 6899999542 234444541212 223599999999952 11 1344555555542 24579999999
Q ss_pred cccc
Q 008577 291 HETK 294 (561)
Q Consensus 291 HE~~ 294 (561)
||..
T Consensus 78 HD~~ 81 (231)
T TIGR01854 78 RDFL 81 (231)
T ss_pred Cchh
Confidence 9964
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.23 E-value=0.00065 Score=69.16 Aligned_cols=73 Identities=18% Similarity=0.182 Sum_probs=46.3
Q ss_pred CceEEEecCC-CC-----------HHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHH----HHHHHhcccCCCeE
Q 008577 221 SEVIVVGDIL-GQ-----------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 284 (561)
Q Consensus 221 ~~i~VIGDIH-G~-----------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl----~lL~~Lk~~~P~~V 284 (561)
|+++.++|+| |. ...|.++++ .......+ .+|+.||++|+..-+.+.. .++..|+...|-.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~-~~~~~~~D-~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLE-FAKAEQID-ALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHH-HHHHcCCC-EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 5789999999 32 234445554 33222233 4999999999986655443 23334433333469
Q ss_pred EEecccccccc
Q 008577 285 YLLRGNHETKN 295 (561)
Q Consensus 285 ~lLRGNHE~~~ 295 (561)
+++.||||...
T Consensus 79 ~~i~GNHD~~~ 89 (253)
T TIGR00619 79 VVISGNHDSAQ 89 (253)
T ss_pred EEEccCCCChh
Confidence 99999999754
No 58
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.19 E-value=0.00054 Score=66.56 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=46.0
Q ss_pred ceEEEecCC-CCH--------------HHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHh-ccc--CCCe
Q 008577 222 EVIVVGDIL-GQF--------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVL--MPHR 283 (561)
Q Consensus 222 ~i~VIGDIH-G~~--------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~L-k~~--~P~~ 283 (561)
|++.++|+| |.. ..|.++++ .......+ .+|+.||++|.+..+.+.+..+... +.. ..-.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d-~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVE-LAIEEKVD-FVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHH-HHHhcCCC-EEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 578899999 422 23555555 43333333 4999999999887655444333322 211 1346
Q ss_pred EEEeccccccccc
Q 008577 284 VYLLRGNHETKNC 296 (561)
Q Consensus 284 V~lLRGNHE~~~~ 296 (561)
++++.||||....
T Consensus 79 v~~~~GNHD~~~~ 91 (223)
T cd00840 79 VFIIAGNHDSPSR 91 (223)
T ss_pred EEEecCCCCCccc
Confidence 9999999997664
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.18 E-value=0.00085 Score=68.46 Aligned_cols=73 Identities=23% Similarity=0.192 Sum_probs=45.0
Q ss_pred ceEEEecCC-C------------CHHHHHHHHHHhcCCCCCCceEEEecCccccCCC-hHHHHHHHHHhcccCCCeEEEe
Q 008577 222 EVIVVGDIL-G------------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW-GLEVLLVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 222 ~i~VIGDIH-G------------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~-SlEvl~lL~~Lk~~~P~~V~lL 287 (561)
++.+++|+| + ....|.++++ .......+ .+|++||+++.|.. +.+-+..+...-...+-.++.+
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~-~i~~~~~d-~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v 79 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVE-EWNRESLD-FVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHV 79 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHH-HHHcCCCC-EEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEe
Confidence 588999999 2 2455666666 33222233 49999999999873 2222222222211223469999
Q ss_pred ccccccccc
Q 008577 288 RGNHETKNC 296 (561)
Q Consensus 288 RGNHE~~~~ 296 (561)
.||||....
T Consensus 80 ~GNHD~~~~ 88 (267)
T cd07396 80 LGNHDLYNP 88 (267)
T ss_pred cCccccccc
Confidence 999998653
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.15 E-value=0.00067 Score=69.71 Aligned_cols=69 Identities=17% Similarity=0.312 Sum_probs=43.8
Q ss_pred eEEEecCCCCHHHHHHHHHH---hcCCCCCCceEEEecCccccCCCh-HHHH-------------HHHHHhcccCCCeEE
Q 008577 223 VIVVGDILGQFHDLVALFEE---NAGFPSDHRYFVFNGNYVDKGSWG-LEVL-------------LVLLAWKVLMPHRVY 285 (561)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~---~~g~p~~~~~~VFLGDyVDRG~~S-lEvl-------------~lL~~Lk~~~P~~V~ 285 (561)
|+|+||+||+++.+...++. +.+ . ..+.+|++||+-..+..+ .+.+ .++-. ....|--++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~-~-~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~ 77 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEG-T-KVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTI 77 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcC-C-CCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEE
Confidence 57999999999988765441 112 2 234599999996544332 3222 12211 234566689
Q ss_pred Eeccccccc
Q 008577 286 LLRGNHETK 294 (561)
Q Consensus 286 lLRGNHE~~ 294 (561)
++-||||..
T Consensus 78 fi~GNHE~~ 86 (262)
T cd00844 78 FIGGNHEAS 86 (262)
T ss_pred EECCCCCCH
Confidence 999999964
No 61
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.14 E-value=0.00058 Score=72.46 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=46.1
Q ss_pred CceEEEecCC-C-----------CHHHHHHHHHHhcCCCCCCceEEEecCccccC-CChHHHHHHHHH--hc--ccCCCe
Q 008577 221 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLA--WK--VLMPHR 283 (561)
Q Consensus 221 ~~i~VIGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvl~lL~~--Lk--~~~P~~ 283 (561)
||++.++|+| | +...|.++++ .+.....+ .+|+.||++|+. +.+.+++.++.. ++ ...+-.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~-~a~~~~vD-~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIE-YSKAHGIT-TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHH-HHHHcCCC-EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 5789999999 4 2344555555 33322333 499999999985 445555444322 11 123457
Q ss_pred EEEecccccccc
Q 008577 284 VYLLRGNHETKN 295 (561)
Q Consensus 284 V~lLRGNHE~~~ 295 (561)
|+++.||||...
T Consensus 79 v~~I~GNHD~~~ 90 (340)
T PHA02546 79 LHVLVGNHDMYY 90 (340)
T ss_pred EEEEccCCCccc
Confidence 999999999743
No 62
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.04 E-value=0.0024 Score=71.35 Aligned_cols=74 Identities=18% Similarity=0.276 Sum_probs=45.2
Q ss_pred CCceEEEecCC-CCH----HHHHHHHHHhcCCC-------CCCceEEEecCcccc-CCCh---------------HHHHH
Q 008577 220 DSEVIVVGDIL-GQF----HDLVALFEENAGFP-------SDHRYFVFNGNYVDK-GSWG---------------LEVLL 271 (561)
Q Consensus 220 ~~~i~VIGDIH-G~~----~dL~~il~~~~g~p-------~~~~~~VFLGDyVDR-G~~S---------------lEvl~ 271 (561)
..++.+++|+| |.- ..+..+++...|.. ..-..+|++||++|. |.+. .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 653 23444444233432 122469999999994 3221 13444
Q ss_pred HHHHhcccCCCeEEEecccccccc
Q 008577 272 VLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 272 lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+|..+. ..-.|++++||||...
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchh
Confidence 444442 2346999999999754
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.00 E-value=0.0015 Score=63.68 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=18.7
Q ss_pred ChhhHHHHHhHcCCcEEEeecCC
Q 008577 419 GPDCTEEFLKENHLKLIIRSHEG 441 (561)
Q Consensus 419 G~d~~~~FL~~n~l~lIIRgHe~ 441 (561)
.+..+.+.++..+.+++|.||.-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H 199 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTH 199 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCC
Confidence 34556777889999999999984
No 64
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=96.89 E-value=0.0033 Score=62.22 Aligned_cols=69 Identities=28% Similarity=0.384 Sum_probs=43.1
Q ss_pred ceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEecCccccCCCh-HHHH-HHHHHhcccCCCeEEEe
Q 008577 222 EVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVL-LVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 222 ~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-lEvl-~lL~~Lk~~~P~~V~lL 287 (561)
|+.+++|+|=. ...|.++++......+.-..+|++||+++.|... .+-+ ..+-.+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999943 3456667662223322233599999999987632 2222 222222 4468999
Q ss_pred ccccccc
Q 008577 288 RGNHETK 294 (561)
Q Consensus 288 RGNHE~~ 294 (561)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 65
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=96.87 E-value=0.0027 Score=65.03 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=45.7
Q ss_pred CCceEEEecCC-C-----------CHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEe
Q 008577 220 DSEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 220 ~~~i~VIGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lL 287 (561)
..+++.++|+| . ....|.++++........-+.+|+.||+++.|.. +-+..+...-...+..++++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEe
Confidence 36799999999 1 2456777776222332222349999999998852 22333222212334569999
Q ss_pred ccccccc
Q 008577 288 RGNHETK 294 (561)
Q Consensus 288 RGNHE~~ 294 (561)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 66
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.84 E-value=0.002 Score=61.26 Aligned_cols=68 Identities=21% Similarity=0.215 Sum_probs=42.4
Q ss_pred eEEEecCCCCHHHH---------------HHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEe
Q 008577 223 VIVVGDILGQFHDL---------------VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 223 i~VIGDIHG~~~dL---------------~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lL 287 (561)
+++++|+|=..... ..+++...........+|++||++++|..+.. +..+..+ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 36888998655432 22333112211223459999999999987644 4444333 3469999
Q ss_pred cccccccc
Q 008577 288 RGNHETKN 295 (561)
Q Consensus 288 RGNHE~~~ 295 (561)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999765
No 67
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.72 E-value=0.0028 Score=69.02 Aligned_cols=72 Identities=21% Similarity=0.257 Sum_probs=44.0
Q ss_pred CceEEEecCC-CC-H------HH----HHHHHHHhcCCCCCCceEEEecCccccCCChHHHH----HHHHHhcccCCCeE
Q 008577 221 SEVIVVGDIL-GQ-F------HD----LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 284 (561)
Q Consensus 221 ~~i~VIGDIH-G~-~------~d----L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl----~lL~~Lk~~~P~~V 284 (561)
++++.++|+| |. + .+ |..+.+ .......+ .+|+.||++|++..+.+.. .++..|+. .+-.+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~-~i~~~~~D-~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLE-QVQEHQVD-AIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHH-HHHhcCCC-EEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcE
Confidence 5789999999 42 1 11 233333 33233334 4999999999986554332 22333432 23469
Q ss_pred EEecccccccc
Q 008577 285 YLLRGNHETKN 295 (561)
Q Consensus 285 ~lLRGNHE~~~ 295 (561)
+++.||||...
T Consensus 78 ~~I~GNHD~~~ 88 (407)
T PRK10966 78 VVLAGNHDSVA 88 (407)
T ss_pred EEEcCCCCChh
Confidence 99999999754
No 68
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.47 E-value=0.007 Score=60.86 Aligned_cols=70 Identities=20% Similarity=0.195 Sum_probs=41.2
Q ss_pred CceEEEecCC-CCHHHHH------------HHHHH---hcCCCCCCceEEEecCccccCCCh---HHHHHHHHHhcccCC
Q 008577 221 SEVIVVGDIL-GQFHDLV------------ALFEE---NAGFPSDHRYFVFNGNYVDKGSWG---LEVLLVLLAWKVLMP 281 (561)
Q Consensus 221 ~~i~VIGDIH-G~~~dL~------------~il~~---~~g~p~~~~~~VFLGDyVDRG~~S---lEvl~lL~~Lk~~~P 281 (561)
.++.||+|+| |.-..+. +.+++ ....... ..+|++||+++....+ .++..++-.+ .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~-d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~ 89 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGI-EALIINGDLKHEFKKGLEWRFIREFIEVT----F 89 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCC-CEEEEcCccccccCChHHHHHHHHHHHhc----C
Confidence 3688999999 6433322 22321 2222222 3599999999765543 2223333332 2
Q ss_pred CeEEEecccccccc
Q 008577 282 HRVYLLRGNHETKN 295 (561)
Q Consensus 282 ~~V~lLRGNHE~~~ 295 (561)
..+++++||||...
T Consensus 90 ~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 90 RDLILIRGNHDALI 103 (225)
T ss_pred CcEEEECCCCCCcc
Confidence 37999999999754
No 69
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.45 E-value=0.0065 Score=66.20 Aligned_cols=55 Identities=11% Similarity=0.148 Sum_probs=41.5
Q ss_pred CCCceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHH
Q 008577 219 EDSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLA 275 (561)
Q Consensus 219 ~~~~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~ 275 (561)
..+||.+++|+|-- +..|.++++ .+.....+ -+|+.||++|++.-|.+++..++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~-~a~~~~vD-~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQ-IAKEQDVD-MILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHH-HHHHcCCC-EEEECCccCCCCCCCHHHHHHHHH
Confidence 35789999999932 557777777 55444444 499999999999999888866544
No 70
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=96.40 E-value=0.0065 Score=59.04 Aligned_cols=71 Identities=14% Similarity=0.058 Sum_probs=43.1
Q ss_pred CceEEEecCCCCHH-----------HHHHHHHHhcCCCCCCceEEEecCccccCCC---hHHHHHHHHHhcccCCCeEEE
Q 008577 221 SEVIVVGDILGQFH-----------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW---GLEVLLVLLAWKVLMPHRVYL 286 (561)
Q Consensus 221 ~~i~VIGDIHG~~~-----------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~---SlEvl~lL~~Lk~~~P~~V~l 286 (561)
.++.+++|+|-... ...+.+.+.......+ .+|++||+++.+.. +.+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPD-LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCC-EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 47899999996221 1122222122222233 49999999997765 355555554432233346899
Q ss_pred eccccc
Q 008577 287 LRGNHE 292 (561)
Q Consensus 287 LRGNHE 292 (561)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.35 E-value=0.0058 Score=57.79 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=27.8
Q ss_pred eEEEecCccccCCChH-H----HHHHHHHhcccC-CCeEEEecccccccc
Q 008577 252 YFVFNGNYVDKGSWGL-E----VLLVLLAWKVLM-PHRVYLLRGNHETKN 295 (561)
Q Consensus 252 ~~VFLGDyVDRG~~Sl-E----vl~lL~~Lk~~~-P~~V~lLRGNHE~~~ 295 (561)
.+|++||++|.|..+. + .+..+..+.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 5999999999886532 2 222222221112 246999999999754
No 72
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.30 E-value=0.11 Score=52.18 Aligned_cols=211 Identities=18% Similarity=0.156 Sum_probs=112.6
Q ss_pred CCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCcc--ccCCChHHHHHH--HHHhcccCCCeEEEecccccccc
Q 008577 220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYV--DKGSWGLEVLLV--LLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 220 ~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyV--DRG~~SlEvl~l--L~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
.+++..+.|+||.+..+.+++. ....-..+ .+|+.||+. +.|+.-. +... +..++ ..--.|+.++||-|...
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~-~~~~~~~D-~lviaGDlt~~~~~~~~~-~~~~~~~e~l~-~~~~~v~avpGNcD~~~ 78 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLN-AAADIRAD-LLVIAGDLTYFHFGPKEV-AEELNKLEALK-ELGIPVLAVPGNCDPPE 78 (226)
T ss_pred cceEEEEeccccchHHHHHHHH-HHhhccCC-EEEEecceehhhcCchHH-HHhhhHHHHHH-hcCCeEEEEcCCCChHH
Confidence 3789999999999999999998 65544444 499999999 8887532 2222 33443 23347999999977654
Q ss_pred cccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHH
Q 008577 296 CTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLR 375 (561)
Q Consensus 296 ~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~ 375 (561)
+- .....++.. +.. -..-+++--||--||..+..--+| .--+-+
T Consensus 79 v~-------~~l~~~~~~----v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~---------------~e~~E~ 122 (226)
T COG2129 79 VI-------DVLKNAGVN----VHG----------RVVEIGGYGFVGFGGSNPTPFNTP---------------REFSED 122 (226)
T ss_pred HH-------HHHHhcccc----ccc----------ceEEecCcEEEEecccCCCCCCCc---------------cccCHH
Confidence 22 111222221 111 111223444444577755421112 112345
Q ss_pred HHHhhcccccCCCCccccccccccCCCCCCCcccccCCceeEeChhhHHHHHhHcCCcEEEeecCCCCCCCCCCCccccc
Q 008577 376 EFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 455 (561)
Q Consensus 376 ~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~ 455 (561)
+|....+..+....+..- +|=.+--+......++-| -..-|..+++++.++.+-.+.|.||=-. .
T Consensus 123 ~I~s~l~~~v~~~~~~~~--Il~~HaPP~gt~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHE------------s 187 (226)
T COG2129 123 EIYSKLKSLVKKADNPVN--ILLTHAPPYGTLLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHE------------S 187 (226)
T ss_pred HHHHHHHHHHhcccCcce--EEEecCCCCCccccCCCC-ccccchHHHHHHHHHhCCceEEEeeecc------------c
Confidence 554433332221111000 222221111111111122 1346889999999999999999998631 2
Q ss_pred cCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCC
Q 008577 456 NGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPP 496 (561)
Q Consensus 456 ~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~ 496 (561)
.|.+. -|+ ||+-.|.-. +.-..|++.++..
T Consensus 188 ~G~d~-----iG~--TivVNPG~~----~~g~yA~i~l~~~ 217 (226)
T COG2129 188 RGIDK-----IGN--TIVVNPGPL----GEGRYALIELEKE 217 (226)
T ss_pred ccccc-----cCC--eEEECCCCc----cCceEEEEEecCc
Confidence 34432 133 666666543 3456677777654
No 73
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.22 E-value=0.012 Score=58.95 Aligned_cols=42 Identities=24% Similarity=0.230 Sum_probs=27.0
Q ss_pred ceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
+.+|+.||+++++... +....+..++. .|..++++.||||..
T Consensus 43 D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~GNHD~~ 84 (232)
T cd07393 43 DIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLKGNHDYW 84 (232)
T ss_pred CEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEeCCcccc
Confidence 4589999999987643 32222222332 233589999999973
No 74
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.05 E-value=0.016 Score=54.94 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=47.7
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccc
Q 008577 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
.||||+||+++.+..-+++.......=+.+|++||+..-...+-+.-.|+ .-....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 38999999999998877621222222245999999997666653444443 344567778999999998
No 75
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.91 E-value=0.67 Score=47.57 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=22.0
Q ss_pred EeChhhHHHHHhHcCCcEEEeecC
Q 008577 417 LWGPDCTEEFLKENHLKLIIRSHE 440 (561)
Q Consensus 417 ~FG~d~~~~FL~~n~l~lIIRgHe 440 (561)
+-.++.++..|+..+-.+|.-||.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCC
Confidence 358899999999999999999998
No 76
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=95.80 E-value=0.029 Score=56.66 Aligned_cols=72 Identities=14% Similarity=0.058 Sum_probs=42.6
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHHhc-CCCCCCceEEEecCccccCCChH---HHHHHH-HHhccc-
Q 008577 222 EVIVVGDILGQF----------------HDLVALFEENA-GFPSDHRYFVFNGNYVDKGSWGL---EVLLVL-LAWKVL- 279 (561)
Q Consensus 222 ~i~VIGDIHG~~----------------~dL~~il~~~~-g~p~~~~~~VFLGDyVDRG~~Sl---Evl~lL-~~Lk~~- 279 (561)
++++++|+|--. ..|.++++ .. ...+....+|++||+++.|...- +....+ -.++..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQ-AINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHH-HHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 578889998663 23455555 33 22223345999999999987642 111111 112211
Q ss_pred CCCeEEEeccccccc
Q 008577 280 MPHRVYLLRGNHETK 294 (561)
Q Consensus 280 ~P~~V~lLRGNHE~~ 294 (561)
.+-.++.++||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 134599999999974
No 77
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=95.73 E-value=0.03 Score=56.17 Aligned_cols=73 Identities=19% Similarity=0.242 Sum_probs=48.4
Q ss_pred CceEEEecCCCC------HHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHh--cccCCCeEEEeccccc
Q 008577 221 SEVIVVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW--KVLMPHRVYLLRGNHE 292 (561)
Q Consensus 221 ~~i~VIGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~L--k~~~P~~V~lLRGNHE 292 (561)
+++..|+|+|-- ...+..+++ .......+ .+|+.||+.++|.. .| ...+..+ +...+..+++++||||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~-~i~~~~~D-~~v~tGDl~~~~~~-~~-~~~~~~~l~~~~~~~~~~~vpGNHD 76 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLA-AIEQLKPD-LLVVTGDLTNDGEP-EE-YRRLKELLARLELPAPVIVVPGNHD 76 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHH-HHhcCCCC-EEEEccCcCCCCCH-HH-HHHHHHHHhhccCCCceEeeCCCCc
Confidence 368899999977 334455556 55544444 49999999999632 22 2222222 2356778999999999
Q ss_pred ccccc
Q 008577 293 TKNCT 297 (561)
Q Consensus 293 ~~~~n 297 (561)
.+..+
T Consensus 77 ~~~~~ 81 (301)
T COG1409 77 ARVVN 81 (301)
T ss_pred CCchH
Confidence 88744
No 78
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=95.66 E-value=0.025 Score=57.86 Aligned_cols=70 Identities=16% Similarity=0.143 Sum_probs=40.5
Q ss_pred CceEEEecCCC----CHHHHHHHHHHhcCCCCCCceEEEecCcccc-CCC---hHHHH-HHHHHhcccCCCeEEEecccc
Q 008577 221 SEVIVVGDILG----QFHDLVALFEENAGFPSDHRYFVFNGNYVDK-GSW---GLEVL-LVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 221 ~~i~VIGDIHG----~~~dL~~il~~~~g~p~~~~~~VFLGDyVDR-G~~---SlEvl-~lL~~Lk~~~P~~V~lLRGNH 291 (561)
-++.|+||.|. ....+.++.+ . ... -.-+|++||+++- |.. .-+.+ ..+-.+.... .++.++|||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~-~--~~~-~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNH 78 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEK-E--LGN-YDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNH 78 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHh-c--cCC-ccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccc
Confidence 47999999995 3333444444 2 122 2349999999954 432 12222 2222222223 488999999
Q ss_pred ccccc
Q 008577 292 ETKNC 296 (561)
Q Consensus 292 E~~~~ 296 (561)
|....
T Consensus 79 D~~~~ 83 (294)
T cd00839 79 EADYN 83 (294)
T ss_pred ccccC
Confidence 98653
No 79
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.53 E-value=0.031 Score=56.91 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=40.1
Q ss_pred eEEEecCCCCHH------HH-HHHHHHhcCCCCCCceEEEecCccccCCCh--------H---HHHHHHHHhcccCCCeE
Q 008577 223 VIVVGDILGQFH------DL-VALFEENAGFPSDHRYFVFNGNYVDKGSWG--------L---EVLLVLLAWKVLMPHRV 284 (561)
Q Consensus 223 i~VIGDIHG~~~------dL-~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--------l---Evl~lL~~Lk~~~P~~V 284 (561)
+..++|+|-... .. ..+++ .......+ .+|++||++|++... . +.+..+..+....+..+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~-~i~~~~pd-~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSN-FIDVIKPA-LVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHH-HHHhhCCC-EEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 567899995221 11 22333 22222233 599999999987531 1 22222233323335679
Q ss_pred EEecccccccc
Q 008577 285 YLLRGNHETKN 295 (561)
Q Consensus 285 ~lLRGNHE~~~ 295 (561)
+.++||||...
T Consensus 80 ~~v~GNHD~~~ 90 (256)
T cd07401 80 FDIRGNHDLFN 90 (256)
T ss_pred EEeCCCCCcCC
Confidence 99999999853
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.53 E-value=0.044 Score=55.11 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=39.3
Q ss_pred EEEecCC--CCH---HHHHHHHHHhcCCCC---CCceEEEecCccccCCC---------------hH-HHHHHHHHhccc
Q 008577 224 IVVGDIL--GQF---HDLVALFEENAGFPS---DHRYFVFNGNYVDKGSW---------------GL-EVLLVLLAWKVL 279 (561)
Q Consensus 224 ~VIGDIH--G~~---~dL~~il~~~~g~p~---~~~~~VFLGDyVDRG~~---------------Sl-Evl~lL~~Lk~~ 279 (561)
++++|+| +.. ..+..+++...+... .-..+|++||++|+... .. ++..++-.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5789999 432 222334442223322 22459999999998310 01 1222333332
Q ss_pred CCCeEEEecccccccc
Q 008577 280 MPHRVYLLRGNHETKN 295 (561)
Q Consensus 280 ~P~~V~lLRGNHE~~~ 295 (561)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2356999999999753
No 81
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.35 E-value=0.028 Score=56.31 Aligned_cols=67 Identities=18% Similarity=0.276 Sum_probs=42.9
Q ss_pred ceEEEecCCCCH---------HHHHHHHHHhcCCCCCCceEEEecCccccCCChH-----HHHHHHHHhcccCCCeEEEe
Q 008577 222 EVIVVGDILGQF---------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLL 287 (561)
Q Consensus 222 ~i~VIGDIHG~~---------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----Evl~lL~~Lk~~~P~~V~lL 287 (561)
+|+.++|+||.+ ..|..+++ .......+..++..||+++.++.+. .++..|-++- ..+ +.
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~-~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d~-~~ 75 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIK-EERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YDA-VT 75 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHH-HHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CCE-Ee
Confidence 478899999887 55666666 4333233445788999999887753 3444443331 133 44
Q ss_pred ccccccc
Q 008577 288 RGNHETK 294 (561)
Q Consensus 288 RGNHE~~ 294 (561)
.||||..
T Consensus 76 ~GNHe~d 82 (252)
T cd00845 76 IGNHEFD 82 (252)
T ss_pred ecccccc
Confidence 5999963
No 82
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.05 E-value=0.073 Score=53.97 Aligned_cols=101 Identities=19% Similarity=0.267 Sum_probs=57.6
Q ss_pred EEecCCCC------HHHHHHHHHHhcCCCCCCceEEEecCcccc--CCC-----hHHHHHHHHHhcccCCCeEEEecccc
Q 008577 225 VVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDK--GSW-----GLEVLLVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 225 VIGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDR--G~~-----SlEvl~lL~~Lk~~~P~~V~lLRGNH 291 (561)
.|+|+|=. -+.|+..++ . .++....++++||++|- |.. --+|...|..+. ....++|.+.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~-~--~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLR-E--EAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHH-h--ccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCch
Confidence 57888843 233455555 2 22233459999999972 322 244555555443 4457899999999
Q ss_pred cccccccccchhHHHHHHhcccchhhHHHHHHHhhcCCCceEEe---eceEEEecCCcCcc
Q 008577 292 ETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATII---AQGVYTTHGGLFRR 349 (561)
Q Consensus 292 E~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaii---~~~il~vHGGIs~~ 349 (561)
+. .+...++ ...| .+.-+|-..++ +.+++++||.....
T Consensus 78 Df-ll~~~f~------~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t 118 (237)
T COG2908 78 DF-LLGKRFA------QEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCT 118 (237)
T ss_pred HH-HHHHHHH------hhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccc
Confidence 94 3222211 1111 12233434333 57999999988754
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=94.90 E-value=0.036 Score=53.23 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=28.1
Q ss_pred eEEEecCccccCCChH--H---HHHHHHHhcc-c----CCCeEEEecccccccc
Q 008577 252 YFVFNGNYVDKGSWGL--E---VLLVLLAWKV-L----MPHRVYLLRGNHETKN 295 (561)
Q Consensus 252 ~~VFLGDyVDRG~~Sl--E---vl~lL~~Lk~-~----~P~~V~lLRGNHE~~~ 295 (561)
.+||+||++|.|.... + .+..+..+.. . ..-.++++.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4999999999887432 2 2222222211 1 1346999999999865
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=94.85 E-value=0.04 Score=54.48 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=31.0
Q ss_pred eEEEecCccccCCCh--HHHHHHHHHhcccCC----CeEEEecccccccc
Q 008577 252 YFVFNGNYVDKGSWG--LEVLLVLLAWKVLMP----HRVYLLRGNHETKN 295 (561)
Q Consensus 252 ~~VFLGDyVDRG~~S--lEvl~lL~~Lk~~~P----~~V~lLRGNHE~~~ 295 (561)
.+||+||++|.|+.+ .|....+-.++..++ -.++.+.||||--.
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 489999999999964 335555555543322 45789999999653
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=94.51 E-value=0.19 Score=48.13 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=40.8
Q ss_pred ceEEEecCCC------------CHHHHHH-HHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEec
Q 008577 222 EVIVVGDILG------------QFHDLVA-LFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (561)
Q Consensus 222 ~i~VIGDIHG------------~~~dL~~-il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLR 288 (561)
.++.+||+|= +++.... |+.+....-..++.+.+|||+.-.-..-.+..+++-. -|+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 4788888883 3333322 2221112222344599999997543333333333332 378999999
Q ss_pred ccccccccc
Q 008577 289 GNHETKNCT 297 (561)
Q Consensus 289 GNHE~~~~n 297 (561)
|||+.---.
T Consensus 81 GNhDk~~~~ 89 (186)
T COG4186 81 GNHDKCHPM 89 (186)
T ss_pred CCCCCCccc
Confidence 999975533
No 86
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=94.23 E-value=0.0039 Score=66.81 Aligned_cols=201 Identities=11% Similarity=-0.126 Sum_probs=121.8
Q ss_pred CCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchhHHHHHHhcccchhhHHHHHHHhhc
Q 008577 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (561)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (561)
++....|+++++++++.+.++.+-+-+..+..+..+.-..++||+ ..++++.++...-.......+++..++-+.
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~-----~~~~~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHG-----DSSFKRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhcc-----CcchhhhheeecccccCceEEEEeccCcCc
Confidence 344458999999999999999999999999999989999999994 344555555433333334457778888888
Q ss_pred CCCceEEeeceEEEecCCcCcccCCCccccccccccccccccCcCCHHHHHhhcccccCCCCccccccccccCCCCCCCc
Q 008577 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (561)
Q Consensus 328 ~LPlaaii~~~il~vHGGIs~~~~l~P~~~~~~~~~~~~~~~~l~sl~~I~~i~R~~~~p~~~~l~~DlLWSDP~~~~g~ 407 (561)
..+...+.+ ++++.||+.+|...- . .......+.++-+- . -..+. |-++-...++
T Consensus 121 ~~l~k~i~~-~il~~~~l~~Pht~h----c------la~g~v~vs~lGd~------------~-gn~kg-~f~llD~~~~ 175 (476)
T KOG0918|consen 121 PSLEKTIDP-DILEKTGLACPHTSH----C------LASGNVMVSCLGDA------------E-GNAKG-GFLLLDSDFN 175 (476)
T ss_pred cceeeeech-hhHhhcCCcCCcccc----c------ccCCCeeEEeeccc------------c-cCCcC-CeEEecCccc
Confidence 888887755 999999999876410 0 00000111111110 0 00011 3222222211
Q ss_pred cccc---CCceeEeChhh--HHHHHhHcCCcEEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCC
Q 008577 408 RENT---KKFGLLWGPDC--TEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVD 482 (561)
Q Consensus 408 ~~n~---RG~g~~FG~d~--~~~FL~~n~l~lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~ 482 (561)
..+. +|..-+||.|- .-+++..-+.+...+.|. ..||...| +++| .+.|+++-|. -
T Consensus 176 ~k~tw~~~~~~p~~gyDfwyqpr~~~mIstewgap~~~--------------~~gf~~~~-v~d~--lyg~~lhvy~--w 236 (476)
T KOG0918|consen 176 EKGTWEKPGHSPLFGYDFWYQPRHNVMISTEWGAPNAL--------------RKGFNPAD-VEDG--LYGSHLHVYQ--W 236 (476)
T ss_pred eecccccCCCccccccceeeccccceEEeecccCchhh--------------hcCCChhH-hhcc--ceeeeeEEEe--c
Confidence 1111 22222333332 223444444556666666 57887776 4445 8889998886 3
Q ss_pred CCCCceEEEEEeCCC
Q 008577 483 GFDNVGAYAVLKPPL 497 (561)
Q Consensus 483 ~~~N~gA~l~l~~~~ 497 (561)
..+|.++.+.+..+.
T Consensus 237 ~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 237 SPGELKQTIDLGDTG 251 (476)
T ss_pred CCccceeEEecCCCC
Confidence 567888888887654
No 87
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=94.00 E-value=0.14 Score=53.45 Aligned_cols=73 Identities=25% Similarity=0.317 Sum_probs=47.5
Q ss_pred CCceEEEecCCCCHHH--HHHHHHHhcCCCCCCceEEEecCcccc-CCChHH-HHHHHHHhcccCCCeEEEecccccccc
Q 008577 220 DSEVIVVGDILGQFHD--LVALFEENAGFPSDHRYFVFNGNYVDK-GSWGLE-VLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 220 ~~~i~VIGDIHG~~~d--L~~il~~~~g~p~~~~~~VFLGDyVDR-G~~SlE-vl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+-+|.-++|+|-.... ..+.+...... .. +-+++.|||+|+ .+.+.+ ++..|..|+ .|-.+|.+.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~-~~-DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANE-LP-DLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhc-CC-CEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccc
Confidence 3568899999987665 22222212222 22 559999999996 555544 445555564 4557999999998765
Q ss_pred c
Q 008577 296 C 296 (561)
Q Consensus 296 ~ 296 (561)
-
T Consensus 120 ~ 120 (284)
T COG1408 120 D 120 (284)
T ss_pred c
Confidence 3
No 88
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=93.90 E-value=0.09 Score=51.91 Aligned_cols=68 Identities=15% Similarity=0.037 Sum_probs=41.3
Q ss_pred ecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHH-HHHHHHhcccC---------------------CCeE
Q 008577 227 GDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV-LLVLLAWKVLM---------------------PHRV 284 (561)
Q Consensus 227 GDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv-l~lL~~Lk~~~---------------------P~~V 284 (561)
=|++|+=.=|.++++ ..-+.-.-+.++||||++|.|--+-+- -.....++..+ .-.+
T Consensus 23 ld~~~~D~YL~~~~~-~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~ 101 (193)
T cd08164 23 LDLFGNDYFLGHIVS-MMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPL 101 (193)
T ss_pred ehhhhhHHHHHHHHH-HHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceE
Confidence 366788777888887 433333334589999999998433221 22222222211 1357
Q ss_pred EEecccccccc
Q 008577 285 YLLRGNHETKN 295 (561)
Q Consensus 285 ~lLRGNHE~~~ 295 (561)
++|.||||.-.
T Consensus 102 i~V~GNHDIG~ 112 (193)
T cd08164 102 INIAGNHDVGY 112 (193)
T ss_pred EEECCcccCCC
Confidence 89999999743
No 89
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=93.70 E-value=0.14 Score=51.94 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=43.1
Q ss_pred CceEEEecCCCCHHHHH----------------HHHHHhcCCCCCCceEEEecCccccCCC-----hHHHHHHHHHhccc
Q 008577 221 SEVIVVGDILGQFHDLV----------------ALFEENAGFPSDHRYFVFNGNYVDKGSW-----GLEVLLVLLAWKVL 279 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~----------------~il~~~~g~p~~~~~~VFLGDyVDRG~~-----SlEvl~lL~~Lk~~ 279 (561)
.++.|+.|+|=-|..-+ +.+.+....-.. ..+|.|||+-.-.+. ..|+..++-.++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p-~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGP-KRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCC-CEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 68999999995443322 222211111122 359999999854333 34444444444322
Q ss_pred CCCeEEEecccccccccc
Q 008577 280 MPHRVYLLRGNHETKNCT 297 (561)
Q Consensus 280 ~P~~V~lLRGNHE~~~~n 297 (561)
.+++++||||...-.
T Consensus 99 ---evi~i~GNHD~~i~~ 113 (235)
T COG1407 99 ---EVIIIRGNHDNGIEE 113 (235)
T ss_pred ---cEEEEeccCCCcccc
Confidence 599999999986633
No 90
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=92.73 E-value=0.23 Score=53.46 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=48.4
Q ss_pred CceEEEecCCCC-------------HHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHh-cccC--CCeE
Q 008577 221 SEVIVVGDILGQ-------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVLM--PHRV 284 (561)
Q Consensus 221 ~~i~VIGDIHG~-------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~L-k~~~--P~~V 284 (561)
+|+.-++|.|=- +.+|..+++ .+-....+ -+|.-||+.|++.-|.+++..+... +... .-.|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~-~a~~~~vD-~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLE-IAKEEKVD-FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHH-HHHHccCC-EEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 467888888833 333334444 33222333 4999999999998888887766443 2222 1359
Q ss_pred EEeccccccccc
Q 008577 285 YLLRGNHETKNC 296 (561)
Q Consensus 285 ~lLRGNHE~~~~ 296 (561)
|+|.||||...-
T Consensus 79 ~~I~GNHD~~~~ 90 (390)
T COG0420 79 VVIAGNHDSPSR 90 (390)
T ss_pred EEecCCCCchhc
Confidence 999999998663
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=92.51 E-value=0.17 Score=51.78 Aligned_cols=66 Identities=17% Similarity=0.245 Sum_probs=37.6
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHHhcCCCCCCceEEEecCccccCCChH-----------HHHHHHH
Q 008577 222 EVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----------EVLLVLL 274 (561)
Q Consensus 222 ~i~VIGDIHG~~----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----------Evl~lL~ 274 (561)
+|+.++|+||++ ..|..+++ .......+.-++..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIK-KARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHH-HHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 478899999997 33555665 3332223332333799998665322 2344443
Q ss_pred HhcccCCCeEEEecccccc
Q 008577 275 AWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 275 ~Lk~~~P~~V~lLRGNHE~ 293 (561)
.+. . . ++..||||.
T Consensus 81 ~~g---~-d-~~~lGNHe~ 94 (277)
T cd07410 81 ALG---Y-D-AGTLGNHEF 94 (277)
T ss_pred hcC---C-C-EEeecccCc
Confidence 332 2 2 445599995
No 92
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=92.10 E-value=0.18 Score=51.06 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=42.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHH-------------------------HHHHH
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL-------------------------LVLLA 275 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl-------------------------~lL~~ 275 (561)
.+|.+++|.||+++.|.++.+ .....+.+. ++|+||++--+..+-|-. .-.+.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~-~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVE-VIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHH-HHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHh-hccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 479999999999999999887 544334454 999999986554443333 22222
Q ss_pred hcccCCCeEEEecccccccc
Q 008577 276 WKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 276 Lk~~~P~~V~lLRGNHE~~~ 295 (561)
.--..+-.+++++||||...
T Consensus 84 ~L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 84 ILGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHCC-SEEEEE--TTS-SH
T ss_pred HHHhcCCcEEEecCCCCchH
Confidence 22234457999999999865
No 93
>PLN02533 probable purple acid phosphatase
Probab=91.74 E-value=0.24 Score=54.52 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=38.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChH--HHH-HHHHHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVL-LVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--Evl-~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
-++.|+||+|-. ......++ .......+ -+|+.||+++-+.+.- +.. .++-.+....| ++...||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~-~i~~~~pD-~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLE-HVSKWDYD-VFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHH-HHHhcCCC-EEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 468999999632 11122333 22222233 4899999997554321 111 12222222233 789999999864
No 94
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=91.40 E-value=0.26 Score=51.08 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=42.0
Q ss_pred ceEEEecCCCCHHH--------------HHHHHHHhcCCCCCCceEEEecCccccCCC-h-----HHHHHHHHHhcccCC
Q 008577 222 EVIVVGDILGQFHD--------------LVALFEENAGFPSDHRYFVFNGNYVDKGSW-G-----LEVLLVLLAWKVLMP 281 (561)
Q Consensus 222 ~i~VIGDIHG~~~d--------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~-S-----lEvl~lL~~Lk~~~P 281 (561)
+|+.+.|+||++.. |..+++ .......+..++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~--- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLD-EARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV--- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHH-HHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC---
Confidence 47789999998643 666666 44333344568889999987654 2 134444444431
Q ss_pred CeEEEeccccccc
Q 008577 282 HRVYLLRGNHETK 294 (561)
Q Consensus 282 ~~V~lLRGNHE~~ 294 (561)
.+ +..||||.-
T Consensus 78 -Da-~t~GNHefd 88 (288)
T cd07412 78 -DA-SAVGNHEFD 88 (288)
T ss_pred -ee-eeecccccc
Confidence 33 555999953
No 95
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.53 E-value=0.56 Score=51.21 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=36.6
Q ss_pred HHHHHHHhcCCCCCCceEEEecCccccCCCh--HHHHHHHHHhcccCC----CeEEEecccccc
Q 008577 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMP----HRVYLLRGNHET 293 (561)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--lEvl~lL~~Lk~~~P----~~V~lLRGNHE~ 293 (561)
|.+.|. ..-+.-..+..+||||++|-|.+. -|--.....++..++ ..++.+.||||-
T Consensus 81 lrr~f~-~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFD-MSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHH-HHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 344555 333333334589999999999875 333444444555555 368899999996
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=89.74 E-value=0.65 Score=47.10 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=39.5
Q ss_pred ceEEEecCCCC--H--HHHHHHHHHhcCCCCCCceEEEecCcc-ccCCChH------HHHHHHHHhcccCCCeEEEeccc
Q 008577 222 EVIVVGDILGQ--F--HDLVALFEENAGFPSDHRYFVFNGNYV-DKGSWGL------EVLLVLLAWKVLMPHRVYLLRGN 290 (561)
Q Consensus 222 ~i~VIGDIHG~--~--~dL~~il~~~~g~p~~~~~~VFLGDyV-DRG~~Sl------Evl~lL~~Lk~~~P~~V~lLRGN 290 (561)
+++++||.=.. . ..+.+.+.+.+..... .-+|++||+| +-|..+. +.+..++... ...-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~-dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~-~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGP-DFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAP-SLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCC-CEEEeCCCccccCCCCCCcchHHHHHHHHHccch-hhcCCeEEecCC
Confidence 47899998653 1 3444444313322223 3489999987 5564221 2233332211 123359999999
Q ss_pred cccc
Q 008577 291 HETK 294 (561)
Q Consensus 291 HE~~ 294 (561)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=89.54 E-value=0.67 Score=47.28 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=36.6
Q ss_pred eEEEecCCCCHHH----------------------HHHHHHHhcCCC-CCCceEEEecCccccCCChH-----HHHHHHH
Q 008577 223 VIVVGDILGQFHD----------------------LVALFEENAGFP-SDHRYFVFNGNYVDKGSWGL-----EVLLVLL 274 (561)
Q Consensus 223 i~VIGDIHG~~~d----------------------L~~il~~~~g~p-~~~~~~VFLGDyVDRG~~Sl-----Evl~lL~ 274 (561)
++-+.|+||++.. +..+++ ..... ..+..++..||+++..+.+. .++..+-
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~-~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIK-RIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHH-HHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 6678899997533 344555 32222 33443467999998776542 3333333
Q ss_pred HhcccCCCeEEEeccccccc
Q 008577 275 AWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 275 ~Lk~~~P~~V~lLRGNHE~~ 294 (561)
.+ +-.+ +. ||||..
T Consensus 82 ~~----g~da-~~-GNHefd 95 (264)
T cd07411 82 AL----GVDA-MV-GHWEFT 95 (264)
T ss_pred hh----CCeE-Ee-cccccc
Confidence 32 2233 34 999953
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=88.88 E-value=0.78 Score=46.61 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=39.0
Q ss_pred ceEEEecCCCCH----------HHHHHHHHHhcCCCCCCceEEEecCccccCCChH-----HHHHHHHHhcccCCCeEEE
Q 008577 222 EVIVVGDILGQF----------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYL 286 (561)
Q Consensus 222 ~i~VIGDIHG~~----------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----Evl~lL~~Lk~~~P~~V~l 286 (561)
+|+-+.|+||++ ..+..+++ ..... .+.-++..||+++..+.+. .++..+-.+ ...+ +
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~-~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKK-EMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-V 74 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHH-HHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-E
Confidence 477889999985 44566666 33222 3456888999998765432 223333222 1234 4
Q ss_pred ecccccc
Q 008577 287 LRGNHET 293 (561)
Q Consensus 287 LRGNHE~ 293 (561)
..||||.
T Consensus 75 ~~GNHef 81 (257)
T cd07408 75 TPGNHEF 81 (257)
T ss_pred ccccccc
Confidence 4699995
No 99
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=88.17 E-value=0.67 Score=52.87 Aligned_cols=45 Identities=22% Similarity=0.294 Sum_probs=37.6
Q ss_pred eEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccc
Q 008577 252 YFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYG 301 (561)
Q Consensus 252 ~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yG 301 (561)
++-.+||+.||||.+--++..|+... +|=+-.||||-..|....|
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMGAa~G 231 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMGAAAG 231 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHHHhhC
Confidence 48899999999999999999998653 7888999999887754433
No 100
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=88.11 E-value=35 Score=35.31 Aligned_cols=52 Identities=10% Similarity=0.093 Sum_probs=30.6
Q ss_pred EEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEEeCCCCCCCcEEEe
Q 008577 434 LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (561)
Q Consensus 434 lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l~~~~~~~~~f~~f 506 (561)
.++-|||. .-|++... ..+++-+.+.|.|.|. -.|.+++++=.. .+.+.++|
T Consensus 206 Vyf~Gnq~-------------~f~t~~~~-~~~~~~v~lv~vP~Fs------~t~~~vlvdl~t-Le~~~v~f 257 (257)
T cd07387 206 VYFAGNQP-------------KFGTKLVE-GEEGQRVLLVCVPSFS------KTGTAVLVNLRT-LECEPISF 257 (257)
T ss_pred EEEeCCCc-------------ceeeeEEE-cCCCCeEEEEEeCCcC------cCCEEEEEECCc-CcEEEEeC
Confidence 56789985 23444322 1246778888999985 366666665443 34444443
No 101
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=85.24 E-value=1.8 Score=46.48 Aligned_cols=73 Identities=18% Similarity=0.326 Sum_probs=44.5
Q ss_pred CceEEEecCCCCHHHHHH---HHHHhcCCCCCCceEEEecCccc-cCCC---h---------HHHHHHHHHhcccCCCeE
Q 008577 221 SEVIVVGDILGQFHDLVA---LFEENAGFPSDHRYFVFNGNYVD-KGSW---G---------LEVLLVLLAWKVLMPHRV 284 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~---il~~~~g~p~~~~~~VFLGDyVD-RG~~---S---------lEvl~lL~~Lk~~~P~~V 284 (561)
|||.|=|=-||+++.+-+ +.+ +.|-...+ .++++|||=- |-.. | +..+.--+.-.+..|=-.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~e-k~~~tkVD-LLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlT 78 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIE-KRGNTKVD-LLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLT 78 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHH-HcCCCCcc-EEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeE
Confidence 578899999999988874 344 44443444 5999999842 1111 1 111222223334455556
Q ss_pred EEecccccccc
Q 008577 285 YLLRGNHETKN 295 (561)
Q Consensus 285 ~lLRGNHE~~~ 295 (561)
+++-||||...
T Consensus 79 IFIGGNHEAsn 89 (456)
T KOG2863|consen 79 IFIGGNHEASN 89 (456)
T ss_pred EEecCchHHHH
Confidence 78999999865
No 102
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.08 E-value=10 Score=36.44 Aligned_cols=62 Identities=26% Similarity=0.357 Sum_probs=47.6
Q ss_pred eEEEecCCC--CHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 223 VIVVGDILG--QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 223 i~VIGDIHG--~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
+.|+||+|= ...+|-.-|+ +.=.|..-.+++++|+. -|.|++.+|-.+. +.++++||--+..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFk-klLvPgki~hilctGNl-----cs~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFK-KLLVPGKIQHILCTGNL-----CSKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEeccccCCccccccCHHHH-hccCCCceeEEEEeCCc-----chHHHHHHHHhhC----CCcEEEecccCcc
Confidence 678999994 4566777777 55567776779999996 4789999987763 4899999986543
No 103
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=84.72 E-value=1.9 Score=42.40 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=30.6
Q ss_pred CCCceEEEecCcc--ccCCChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 248 SDHRYFVFNGNYV--DKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 248 ~~~~~~VFLGDyV--DRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+.++.++.-||+- =|=+...+-+.+|-+| |+.=+++||||++..
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3445578889973 2344455556666554 888999999999876
No 104
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=82.08 E-value=2.9 Score=43.39 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=47.5
Q ss_pred CceEEEecCCCC--HHHHHHHHHHhcCCCCCCceEEEecCccccC-CChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 221 SEVIVVGDILGQ--FHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 221 ~~i~VIGDIHG~--~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
|+|.++|||=|. ...|...+. ........+-.|.+||...-| .-+-+++..|..+-. .++.+ |||+.-.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~-~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLP-QLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHH-HHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhccC
Confidence 579999999999 466666666 333332334477799999766 456788888876532 45555 9998754
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=81.68 E-value=2.9 Score=43.13 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=37.6
Q ss_pred ceEEEecCCCCH---------------------HHHHHHHHHhcCCCCCCceEEEecCccccCCCh-----HHHHHHHHH
Q 008577 222 EVIVVGDILGQF---------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLA 275 (561)
Q Consensus 222 ~i~VIGDIHG~~---------------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvl~lL~~ 275 (561)
+|+-++|+||++ ..+..+++ .......+.-++..||++...+.+ ..++..+-.
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVK-ELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHH-HHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 367789999875 44455555 332223344466689999876543 222333322
Q ss_pred hcccCCCeEEEeccccccc
Q 008577 276 WKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 276 Lk~~~P~~V~lLRGNHE~~ 294 (561)
+. . .+. ..||||.-
T Consensus 81 ~g---~-D~~-~lGNHefd 94 (281)
T cd07409 81 LG---Y-DAM-TLGNHEFD 94 (281)
T ss_pred cC---C-CEE-Eecccccc
Confidence 22 2 343 44999964
No 106
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.87 E-value=4.4 Score=44.92 Aligned_cols=69 Identities=23% Similarity=0.390 Sum_probs=52.5
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCC-CceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccc
Q 008577 221 SEVIVVGDILGQFHDLVALFEENAGFPSD-HRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~-~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNH 291 (561)
.+|.||||.-|.+..|.+-.+ .....+. =+-++++|++.+--..+-|++.+....+ ..|-.+|++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~-~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQ-KVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHH-HHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 589999999999999987776 3322221 2348999999997777888888877654 5677788887775
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.38 E-value=2.4 Score=52.35 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=39.7
Q ss_pred CceEEEecCCCCH---HHHHHHHHHhcCCCCCCceEEEecCccccCCChH-----HHHHHHHHhcccCCCeEEEeccccc
Q 008577 221 SEVIVVGDILGQF---HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLLRGNHE 292 (561)
Q Consensus 221 ~~i~VIGDIHG~~---~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----Evl~lL~~Lk~~~P~~V~lLRGNHE 292 (561)
-+|+.++|+||++ ..+..+++ .......+..++..||+++..+.+. .++..+-.+. --++..||||
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHE 734 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIK-EVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHE 734 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHH-HHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccc
Confidence 3578899999985 44444555 3222223333444899999876542 3444443332 2356889999
Q ss_pred c
Q 008577 293 T 293 (561)
Q Consensus 293 ~ 293 (561)
.
T Consensus 735 f 735 (1163)
T PRK09419 735 F 735 (1163)
T ss_pred c
Confidence 6
No 108
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=79.13 E-value=6.4 Score=43.91 Aligned_cols=76 Identities=24% Similarity=0.363 Sum_probs=42.0
Q ss_pred CceEEEecCCC-CHHHH----HHHHHHhcCC---CCCCceEEEecCcccc-CCCh-----------HHHHHHHHHhcccC
Q 008577 221 SEVIVVGDILG-QFHDL----VALFEENAGF---PSDHRYFVFNGNYVDK-GSWG-----------LEVLLVLLAWKVLM 280 (561)
Q Consensus 221 ~~i~VIGDIHG-~~~dL----~~il~~~~g~---p~~~~~~VFLGDyVDR-G~~S-----------lEvl~lL~~Lk~~~ 280 (561)
-.+..++|||= ...-+ ...+++..|. .+.-..++..||.||. |-++ .|-...+..+--.-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 35788999995 33333 3333322222 1223567888999993 3221 22233333333333
Q ss_pred CC--eEEEeccccccccc
Q 008577 281 PH--RVYLLRGNHETKNC 296 (561)
Q Consensus 281 P~--~V~lLRGNHE~~~~ 296 (561)
|. .|++.+|||+..-.
T Consensus 306 p~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred CCCceEEEecCCCCcccc
Confidence 44 47899999998553
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=78.31 E-value=4 Score=41.53 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHhcCCCCCCceEEEecCccccCCCh-----HHHHHHHHHhcccCCCeEEEecccccc
Q 008577 231 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 231 G~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvl~lL~~Lk~~~P~~V~lLRGNHE~ 293 (561)
|-+.-+..+++ .......+.-++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRK-QLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHH-HHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45677777777 433333454688999999877543 34555554443 23556799996
No 110
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=78.08 E-value=2.8 Score=43.61 Aligned_cols=68 Identities=19% Similarity=0.137 Sum_probs=37.5
Q ss_pred ceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEecCccccCCChHH-------HHHHHHHhcc
Q 008577 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE-------VLLVLLAWKV 278 (561)
Q Consensus 222 ~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE-------vl~lL~~Lk~ 278 (561)
+|+-..|+||++. .+.+.+++.......+..++..||++..-+.+-- ++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 3777899999863 2222232122222233456779999976544321 233333332
Q ss_pred cCCCeEEEeccccccc
Q 008577 279 LMPHRVYLLRGNHETK 294 (561)
Q Consensus 279 ~~P~~V~lLRGNHE~~ 294 (561)
--.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 235778999984
No 111
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=72.80 E-value=7.6 Score=39.95 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=29.2
Q ss_pred ceEEEecCccccCCChH--H-----HHH-HHHHhcccCC-CeEEEecccccccccc
Q 008577 251 RYFVFNGNYVDKGSWGL--E-----VLL-VLLAWKVLMP-HRVYLLRGNHETKNCT 297 (561)
Q Consensus 251 ~~~VFLGDyVDRG~~Sl--E-----vl~-lL~~Lk~~~P-~~V~lLRGNHE~~~~n 297 (561)
.-+|+.||+++.+.+.. + ... +.-.++..+| -.|+...||||....+
T Consensus 70 dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 70 DFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred CEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 34899999998876531 1 112 2222333334 3599999999986543
No 112
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=71.30 E-value=2.6 Score=46.60 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=34.5
Q ss_pred eEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccc
Q 008577 252 YFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCT 297 (561)
Q Consensus 252 ~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n 297 (561)
++=.+||+-||||++-.++..|.... .+=+-.|||+-..|.
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWmg 233 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWMG 233 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEee
Confidence 47889999999999999999987653 677889999987764
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=68.40 E-value=6.3 Score=40.83 Aligned_cols=66 Identities=14% Similarity=0.067 Sum_probs=35.2
Q ss_pred eEEEecCCCCHHH----------HHHHHHHhcC----CCCCCceEEEecCccccCCCh-----HHHHHHHHHhcccCCCe
Q 008577 223 VIVVGDILGQFHD----------LVALFEENAG----FPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHR 283 (561)
Q Consensus 223 i~VIGDIHG~~~d----------L~~il~~~~g----~p~~~~~~VFLGDyVDRG~~S-----lEvl~lL~~Lk~~~P~~ 283 (561)
|+-..|+||++.. +..+++ ... ....+..++-.||++..-+.+ .-++..+-.+. ..
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~-~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVD-GVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHH-HHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 6778999998633 344444 221 112344577899998432322 22233333332 13
Q ss_pred EEEeccccccc
Q 008577 284 VYLLRGNHETK 294 (561)
Q Consensus 284 V~lLRGNHE~~ 294 (561)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 43 44999954
No 114
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=66.89 E-value=12 Score=36.33 Aligned_cols=72 Identities=15% Similarity=0.253 Sum_probs=36.3
Q ss_pred eEEEecCCCC-----HHHHHHHHHHhcC-CCCCCceEEEecCccccCCChH------------H-HHHHHHHhc--ccCC
Q 008577 223 VIVVGDILGQ-----FHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWGL------------E-VLLVLLAWK--VLMP 281 (561)
Q Consensus 223 i~VIGDIHG~-----~~dL~~il~~~~g-~p~~~~~~VFLGDyVDRG~~Sl------------E-vl~lL~~Lk--~~~P 281 (561)
|++++|+|=. +..|.++|. ... .... ..+|++|+++|.-.... + .+..+..+. +..-
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~-~~~~~~~p-~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 78 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLS-GVEDASKP-DVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPS 78 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHH-CCCHCTTE-CEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCC
T ss_pred CEEEecCccCCCHhHHHHHHHHHH-hccccCCC-cEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccc
Confidence 4567777654 566677777 444 2223 35999999999622221 1 111111111 1122
Q ss_pred CeEEEeccccccccc
Q 008577 282 HRVYLLRGNHETKNC 296 (561)
Q Consensus 282 ~~V~lLRGNHE~~~~ 296 (561)
-+|+++.|+||-...
T Consensus 79 ~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 79 TQVVLVPGPNDPTSS 93 (209)
T ss_dssp SEEEEE--TTCTT-S
T ss_pred cEEEEeCCCcccccc
Confidence 579999999997664
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=66.65 E-value=14 Score=38.12 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=43.8
Q ss_pred ceEEEecCCCCHH--HHHHHHHHhcCCCCCCceEEEecCccccC-CChHHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 222 EVIVVGDILGQFH--DLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 222 ~i~VIGDIHG~~~--dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+|..+|||=|..- .+...+. ........+-+|-+||..--| .-+.++...|..+-. .++.+ ||||.-.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~-~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLP-KLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHH-HHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccCc
Confidence 5789999999763 3445555 332222223467799998766 367788888877643 44444 9997544
No 116
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=65.33 E-value=9.5 Score=44.41 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=40.7
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEecCccccCCChH-------------HHHHH
Q 008577 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (561)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------Evl~l 272 (561)
+|+-..|+||++.. +..+++ .......+..+|-.||++...+.+- -++..
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~a 105 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIK-AARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKA 105 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHH-HHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHH
Confidence 47888999999743 334444 3322223456888999998666532 13444
Q ss_pred HHHhcccCCCeEEEecccccc
Q 008577 273 LLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 273 L~~Lk~~~P~~V~lLRGNHE~ 293 (561)
+-.+. --....||||.
T Consensus 106 mN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 106 MNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHhcC-----CcEEeccchhh
Confidence 44443 23577899995
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=64.65 E-value=11 Score=39.91 Aligned_cols=65 Identities=20% Similarity=0.160 Sum_probs=38.2
Q ss_pred eEEEecCCCCHH------HHHHHHHHhcCCC----CCCceEEEecCccccCCCh-------------HHHHHHHHHhccc
Q 008577 223 VIVVGDILGQFH------DLVALFEENAGFP----SDHRYFVFNGNYVDKGSWG-------------LEVLLVLLAWKVL 279 (561)
Q Consensus 223 i~VIGDIHG~~~------dL~~il~~~~g~p----~~~~~~VFLGDyVDRG~~S-------------lEvl~lL~~Lk~~ 279 (561)
|+=..|+||++. .+..+++ ..... ..+..++..||.+.-++.. .-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~-~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVN-ALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHH-HHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 566789999953 4434444 22111 2344688899998765542 33344444443
Q ss_pred CCCeEEEecccccc
Q 008577 280 MPHRVYLLRGNHET 293 (561)
Q Consensus 280 ~P~~V~lLRGNHE~ 293 (561)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 23567899995
No 118
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=62.93 E-value=9.7 Score=42.76 Aligned_cols=68 Identities=15% Similarity=0.216 Sum_probs=41.3
Q ss_pred ceEEEecCCCCHH------------H---HHHHHHHhcCCCCCCceEEEecCccccCCCh------HHHHHHHHHhcccC
Q 008577 222 EVIVVGDILGQFH------------D---LVALFEENAGFPSDHRYFVFNGNYVDKGSWG------LEVLLVLLAWKVLM 280 (561)
Q Consensus 222 ~i~VIGDIHG~~~------------d---L~~il~~~~g~p~~~~~~VFLGDyVDRG~~S------lEvl~lL~~Lk~~~ 280 (561)
+|+-..|+||++. - +..+++ .......+..+|=.||+++..+-+ .-++.+|-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~-~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~--- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVK-QLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG--- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHH-HHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC---
Confidence 3777899999998 2 333333 222222244577799999984333 33555555554
Q ss_pred CCeEEEecccccccc
Q 008577 281 PHRVYLLRGNHETKN 295 (561)
Q Consensus 281 P~~V~lLRGNHE~~~ 295 (561)
-=.+-.||||.-.
T Consensus 104 --yDa~tiGNHEFd~ 116 (517)
T COG0737 104 --YDAMTLGNHEFDY 116 (517)
T ss_pred --CcEEeeccccccc
Confidence 2246779999754
No 119
>cd01677 PFL2_DhaB_BssA Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.
Probab=61.38 E-value=9.5 Score=45.37 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=67.9
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHhhhhhhhhhhhhccchh
Q 008577 57 EADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTM 134 (561)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~Fe~ai~~~~~~~~~~~~~~~ 134 (561)
+.+.-++..-+++.|+.-+++--+++.++.=+.-|..+|+++++ .+..|++|. +-+.|..|++...=-.-....++.
T Consensus 192 k~~fy~A~~i~~~av~~~a~Rya~la~e~A~~e~d~~rk~EL~~-iA~~c~~vp~~pp~tf~EAlQ~~~~~~l~~~~e~n 270 (781)
T cd01677 192 KIYFYQAMIIVCEAVITYAKRYAELAKELAAKETDPKRKAELLE-IAEICRRVPAHPPRTFWEALQSFWFIHLILQIESN 270 (781)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHH-HHHHhccCcCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34455666667788888888888888887766656666666555 577899999 468899999874221000000000
Q ss_pred hhhhcCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 008577 135 RERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (561)
Q Consensus 135 ~~~~~~~~~~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f 175 (561)
...+.-|.++.+-.++=.--+ ++|.+|.+++.+|++.|
T Consensus 271 ~~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~eeA~Ell~~f 308 (781)
T cd01677 271 GHSISPGRFDQYLYPFYKQDI---EEGRLTREGAIELLECL 308 (781)
T ss_pred CcccCCCcHHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence 011112222222221101112 46789999999999876
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=61.16 E-value=12 Score=43.35 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=39.2
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEecCccccCCChH-------------HHHHH
Q 008577 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (561)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------Evl~l 272 (561)
+|+-..|+||++.. +..+++ .......+..+|-.||.+..-+.+- -++..
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIK-QARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHH-HHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 47778999999743 334454 3222223456888999998655442 13333
Q ss_pred HHHhcccCCCeEEEecccccc
Q 008577 273 LLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 273 L~~Lk~~~P~~V~lLRGNHE~ 293 (561)
+-.+. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 33332 23467899994
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=56.35 E-value=14 Score=45.79 Aligned_cols=42 Identities=19% Similarity=0.386 Sum_probs=26.0
Q ss_pred ceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEecCccccCC
Q 008577 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (561)
Q Consensus 222 ~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (561)
+|+-..|+||++. .+..+++ .......+..+|-.||++...+
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~-~~r~~~~n~llld~GD~~qGs~ 100 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIK-KARKENPNTLLVDNGDLIQGNP 100 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHH-HHHHhCCCeEEEeCCCccCCCh
Confidence 4888999999863 3344454 3222223444555999998665
No 122
>PRK09983 pflD putative formate acetyltransferase 2; Provisional
Probab=56.28 E-value=14 Score=43.97 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=70.0
Q ss_pred cchhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHhhhhhhhhhhhhccc
Q 008577 55 VTEADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGS 132 (561)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~Fe~ai~~~~~~~~~~~~~ 132 (561)
.++++.-++..-+++.|..-++|--+++..+.=++-|..+|+++++| +..|++|. +-+.|-.|++..-=-.-.-..+
T Consensus 183 ~~~~~fy~a~~i~~~av~~~a~Rya~lA~~~a~~e~d~~rk~EL~~i-A~~c~~vp~~pa~tF~EAlQ~~wf~~l~~~~e 261 (765)
T PRK09983 183 QPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTI-AEISRHNAQHKPQTFWQACQLFWYMNIILQYE 261 (765)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH-HHHhccCcccCCCCHHHHHHHHHHHHHHHHHh
Confidence 44567777777788888888888888887777677777777776655 67799999 4788999998742110000001
Q ss_pred hhhhhhcCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 008577 133 TMRERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (561)
Q Consensus 133 ~~~~~~~~~~~~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f 175 (561)
+....+.-|.++..-.++=.--+ ++| +|.+++.+|++.|
T Consensus 262 ~ng~~~s~GR~Dq~L~Pyy~~Dl---~~G-~t~e~A~Ell~~~ 300 (765)
T PRK09983 262 SNASSLSLGRFDQYMLPFYQASL---TQG-EDPAFLKELLESL 300 (765)
T ss_pred cCccccCCCcHHHHHHHHHHHHH---HcC-CCHHHHHHHHHHH
Confidence 11112222222222221100011 355 7999999999866
No 123
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=53.84 E-value=20 Score=42.99 Aligned_cols=66 Identities=21% Similarity=0.192 Sum_probs=39.2
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEecCccccCCChH--------------HHHH
Q 008577 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--------------EVLL 271 (561)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--------------Evl~ 271 (561)
+|+-..|+||++.. +..+++ .......+..+|..||++..-+.+- -++.
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~-~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIE-EAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHH-HHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 47778999999642 233444 2222223456888999997654431 1444
Q ss_pred HHHHhcccCCCeEEEecccccc
Q 008577 272 VLLAWKVLMPHRVYLLRGNHET 293 (561)
Q Consensus 272 lL~~Lk~~~P~~V~lLRGNHE~ 293 (561)
.+-.|. --....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 444443 23577899995
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=52.49 E-value=35 Score=35.98 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=48.5
Q ss_pred CCCceEEEecCC----CCHHHHHHHHHHhc-CC-CC--CCceEEEecCccccC----CCh----HHHHHHHHHh-cccCC
Q 008577 219 EDSEVIVVGDIL----GQFHDLVALFEENA-GF-PS--DHRYFVFNGNYVDKG----SWG----LEVLLVLLAW-KVLMP 281 (561)
Q Consensus 219 ~~~~i~VIGDIH----G~~~dL~~il~~~~-g~-p~--~~~~~VFLGDyVDRG----~~S----lEvl~lL~~L-k~~~P 281 (561)
...+++|+||+| -.++.|.++|. .. .. +. ....+||+|+++-+. ..+ .|-+.-|..+ ...||
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~-~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLS-LYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHH-HhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 456799999999 56777888888 33 11 21 123599999998662 222 2334444432 22444
Q ss_pred -----CeEEEecccccccc
Q 008577 282 -----HRVYLLRGNHETKN 295 (561)
Q Consensus 282 -----~~V~lLRGNHE~~~ 295 (561)
.++++++|-.|-..
T Consensus 105 ~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHhcCeEEEECCCCCCCc
Confidence 68999999998643
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=52.11 E-value=27 Score=39.81 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=24.7
Q ss_pred CCceEEEecCccccCCCh-----HHHHHHHHHhcccCCCeEEEeccccccc
Q 008577 249 DHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (561)
Q Consensus 249 ~~~~~VFLGDyVDRG~~S-----lEvl~lL~~Lk~~~P~~V~lLRGNHE~~ 294 (561)
.+..++..||++...+.+ .-.+.++-++. --.+..||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 345688899998755443 22334333332 335778999953
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=49.44 E-value=22 Score=40.30 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=36.2
Q ss_pred ceEEEecCCCCHH----------HHHHHHHHhcC----CCCCCceEEEecCccccCCCh-----HHHHHHHHHhcccCCC
Q 008577 222 EVIVVGDILGQFH----------DLVALFEENAG----FPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH 282 (561)
Q Consensus 222 ~i~VIGDIHG~~~----------dL~~il~~~~g----~p~~~~~~VFLGDyVDRG~~S-----lEvl~lL~~Lk~~~P~ 282 (561)
.|+-+.|+||++. .+..+++ ... ....+.-++..||++..-+.+ .-++.++-.+. -
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~-~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~ 110 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVD-QIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----Y 110 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHH-HHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----C
Confidence 3777899999874 2233343 211 112345588899998643332 11233333332 2
Q ss_pred eEEEecccccccc
Q 008577 283 RVYLLRGNHETKN 295 (561)
Q Consensus 283 ~V~lLRGNHE~~~ 295 (561)
.+.. .||||.-.
T Consensus 111 Da~t-lGNHEFD~ 122 (551)
T PRK09558 111 DAMA-VGNHEFDN 122 (551)
T ss_pred CEEc-ccccccCc
Confidence 3444 49999543
No 127
>TIGR01774 PFL2-3 pyruvate formate-lyase. This model represents isoforms of the pyruvate-formate lyases found in a limited number of species including E. coli. This enzyme catalyzes the reaction pyruvate + CoA - acetyl-CoA + formate, which is a step in the fermentation of glucose.
Probab=49.20 E-value=21 Score=42.63 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=65.9
Q ss_pred hhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHhhhhhhhhhhhhccchhh
Q 008577 58 ADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTMR 135 (561)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~Fe~ai~~~~~~~~~~~~~~~~ 135 (561)
.+.-++..-+++.|..-+.|--+++..+.=+.-|..+|+++++| +..|++|. +-+.|..|++..-=-.-.-..++..
T Consensus 195 ~~fy~a~~i~~~a~~~~a~R~a~lA~~~a~~e~d~~Rk~EL~~i-A~~c~~vp~~pa~tf~EAlQ~~wf~~l~~~~E~ng 273 (786)
T TIGR01774 195 YSFYQAAKIVLEAVINHILRYAKLAEEMAASETGESRREELLKI-AEICRKVAAEKPQTFWQAVQLVWLVQSILQQESNE 273 (786)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH-HHHhccCcccCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 34445555566777777777777777776677777777777766 55899998 4788999998632110000001111
Q ss_pred hhhcCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 008577 136 ERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (561)
Q Consensus 136 ~~~~~~~~~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f 175 (561)
..+.-|.++..-.++=.--+ ++|.+|.+++.+|++.|
T Consensus 274 ~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~e~A~ELl~~~ 310 (786)
T TIGR01774 274 QSISMGRIDQYLYPFYKKDI---GEGRIDRELAFEILASL 310 (786)
T ss_pred cccCCCchHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence 11222222222211100011 56789999999999866
No 128
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=46.51 E-value=80 Score=36.70 Aligned_cols=61 Identities=21% Similarity=0.365 Sum_probs=41.4
Q ss_pred ChhhHHHHHhHcCCc----EEEeecCCCCCCCCCCCccccccCceecccCCCCeEEEE---eCCCCCCCCCCCCCceEEE
Q 008577 419 GPDCTEEFLKENHLK----LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTL---FTAPNYPQVDGFDNVGAYA 491 (561)
Q Consensus 419 G~d~~~~FL~~n~l~----lIIRgHe~~da~~~r~~~~~~~~Gy~~~h~~~~gklITV---FSApnY~~~~~~~N~gA~l 491 (561)
-++..+..|+..||+ .||-||.++. +.+|-..- -++||++.| ||.+ |- ....-|+|-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VIDGGfskA-Yq---k~TGIAGYT 570 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVIDGGFSKA-YQ---KTTGIAGYT 570 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEcChhhhh-hc---cccCccceE
Confidence 466788889999997 9999999863 45676543 368999998 5553 21 223445565
Q ss_pred EEeC
Q 008577 492 VLKP 495 (561)
Q Consensus 492 ~l~~ 495 (561)
.+.+
T Consensus 571 LiyN 574 (640)
T PF06874_consen 571 LIYN 574 (640)
T ss_pred EEec
Confidence 5544
No 129
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=45.47 E-value=33 Score=37.04 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=27.3
Q ss_pred ceEEEecCccccCCCh---HHHHHHHHHhcccCCCeEEEecccccccc
Q 008577 251 RYFVFNGNYVDKGSWG---LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 251 ~~~VFLGDyVDRG~~S---lEvl~lL~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
+-+||.||.|+. ... ..+++-.++-.+.+.=-...+.||||...
T Consensus 102 DlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 102 DLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 359999999985 332 33333333333333334678999998754
No 130
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=44.04 E-value=33 Score=38.26 Aligned_cols=20 Identities=10% Similarity=0.205 Sum_probs=18.6
Q ss_pred hHHHHHhHcCCcEEEeecCC
Q 008577 422 CTEEFLKENHLKLIIRSHEG 441 (561)
Q Consensus 422 ~~~~FL~~n~l~lIIRgHe~ 441 (561)
.++..+-++++++++=||.-
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH 342 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVH 342 (452)
T ss_pred HHHHHHHHhceeEEEeccce
Confidence 68999999999999999984
No 131
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=42.38 E-value=38 Score=35.61 Aligned_cols=67 Identities=18% Similarity=0.263 Sum_probs=42.1
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCC-CeEEEecccccccc
Q 008577 219 EDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMP-HRVYLLRGNHETKN 295 (561)
Q Consensus 219 ~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P-~~V~lLRGNHE~~~ 295 (561)
...+++.|+|.|+..++.. ..|+.+- ++-+||+-.-|- +-||.-+=-.+ -..| ..=+.++||||.-+
T Consensus 60 ~~~r~VcisdtH~~~~~i~-------~~p~gDv-lihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFDIN-------DIPDGDV-LIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred CceEEEEecCcccccCccc-------cCCCCce-EEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 4568999999998765443 2444444 899999977664 34555432211 1222 23468999999855
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=42.37 E-value=32 Score=36.21 Aligned_cols=85 Identities=20% Similarity=0.270 Sum_probs=48.7
Q ss_pred HhcCCceeeecC-CCCceEEEecC--CCCHHHHHHHHHH-hcCCCCCCceEEEecCcc-ccCCCh---------HHHHHH
Q 008577 207 REERNCVKLRVR-EDSEVIVVGDI--LGQFHDLVALFEE-NAGFPSDHRYFVFNGNYV-DKGSWG---------LEVLLV 272 (561)
Q Consensus 207 ~~ep~lv~i~~~-~~~~i~VIGDI--HG~~~dL~~il~~-~~g~p~~~~~~VFLGDyV-DRG~~S---------lEvl~l 272 (561)
...|.+.+=..+ ..-++.||||- +|.|..=+..+.. ..|..-+-+-+|-+||-+ |-|..+ -|-+..
T Consensus 29 ~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT 108 (336)
T KOG2679|consen 29 AELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYT 108 (336)
T ss_pred hhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhccc
Confidence 334444443222 23479999995 8888776655541 223222234488899954 667654 233332
Q ss_pred HHHhcccCCCeEEEecccccccc
Q 008577 273 LLAWKVLMPHRVYLLRGNHETKN 295 (561)
Q Consensus 273 L~~Lk~~~P~~V~lLRGNHE~~~ 295 (561)
--+|+ ...+.+.|||+.+-
T Consensus 109 ~pSLQ----kpWy~vlGNHDyrG 127 (336)
T KOG2679|consen 109 APSLQ----KPWYSVLGNHDYRG 127 (336)
T ss_pred Ccccc----cchhhhccCccccC
Confidence 22332 25789999999753
No 133
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=41.15 E-value=40 Score=37.07 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=40.6
Q ss_pred ceEEEecCC-CCHHHH--HHHHHHhcCCCCCCceEEEecCccccCCChH------HHHHHHHHhcc-cCCCeEEEecccc
Q 008577 222 EVIVVGDIL-GQFHDL--VALFEENAGFPSDHRYFVFNGNYVDKGSWGL------EVLLVLLAWKV-LMPHRVYLLRGNH 291 (561)
Q Consensus 222 ~i~VIGDIH-G~~~dL--~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl------Evl~lL~~Lk~-~~P~~V~lLRGNH 291 (561)
+++++||-= |.+... .+.+. ..+....-+-+|-+||-++.|..|+ +...-++.-.. ...-.++++.|||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~-~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLK-QYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHH-HHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 689999953 332221 12233 2221222334899999988887764 33444442221 0112589999999
Q ss_pred ccc
Q 008577 292 ETK 294 (561)
Q Consensus 292 E~~ 294 (561)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 134
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=39.20 E-value=46 Score=39.80 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=25.9
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEecCccccCC
Q 008577 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (561)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (561)
+|+-..|+||++.. +..+++ .......+..+|..||++---+
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~-~~R~e~~ntlllD~GD~iqGsp 98 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVN-KAREEAKNSVLFDDGDALQGTP 98 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHH-HHHHhCCCeEEEECCCCCCCch
Confidence 48888999999632 333444 2222223456888999885433
No 135
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=35.82 E-value=1.1e+02 Score=30.62 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=62.0
Q ss_pred ceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccccccccccccchh----------------HHHHHHhcccc
Q 008577 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW----------------AELCTKFGKKD 314 (561)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNHE~~~~n~~yGF~----------------~E~~~ky~~~~ 314 (561)
..+||+| .|-+.-|.+.+|-+++..|..+.++ .|+-|.+..++...|. .|+.+.|-.
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~lt-- 112 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLT-- 112 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhh--
Confidence 4589997 5889999999999998888766655 7898888766544432 233333433
Q ss_pred hhhHHHHHHHhhcCCCceEEeeceEEEecC-Cc
Q 008577 315 CKLVFDKCLECFRTLPLATIIAQGVYTTHG-GL 346 (561)
Q Consensus 315 ~~~l~~~~~~~f~~LPlaaii~~~il~vHG-GI 346 (561)
.+|..+.....++++...+-.+++.+-| |-
T Consensus 113 --Sv~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 113 --SVFTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred --hHHHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 3677777777777887777667777776 54
No 136
>PF02901 PFL: Pyruvate formate lyase; InterPro: IPR004184 Pyruvate formate-lyase 2.3.1.54 from EC (also known as formate C-acetyltransferase) is an enzyme which converts acetyl-CoA and formate to CoA and pyruvate. Acetyl-CoA + formate = CoA + pyruvate In Escherichia coli, it uses a radical mechanism to reversibly cleave the C1-C2 bond of pyruvate using the Gly 734 radical and two cysteine residues (Cys 418, Cys 419) [].; GO: 0008861 formate C-acetyltransferase activity, 0006006 glucose metabolic process, 0005737 cytoplasm; PDB: 1QHM_A 1MZO_B 3PFL_B 1H18_A 2PFL_A 1CM5_B 1H16_A 1H17_A 1R9E_A 1R8W_A ....
Probab=34.15 E-value=25 Score=40.98 Aligned_cols=114 Identities=21% Similarity=0.253 Sum_probs=65.6
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHhhhhhhhhhhhhc-cch
Q 008577 57 EADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEV-GST 133 (561)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~Fe~ai~~~~~~~~~~~-~~~ 133 (561)
+.+.-++..-++++|..-+++-.+++..++=+.=|..+|.++++ .+..|.+|. .-+.|..|++..-=- +.-. -+.
T Consensus 195 k~~fy~a~~i~~~av~~~a~Rya~la~~~A~~e~d~~rk~EL~~-iA~~c~~vp~~pa~tF~EAlQ~~wf~-~l~~~~e~ 272 (648)
T PF02901_consen 195 KRDFYEAMIIVLEAVIAYAKRYADLAEELAEEETDPERKAELLE-IAEICRRVPENPARTFREALQSVWFI-HLALHIES 272 (648)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SSHHHHHHHHH-HHHHHHHCTTS---SHHHHHHHHHHH-HHHHHHHS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCHHHHHHHHH-HHHHhCcCcCCCCCCHHHHHHHHHHH-HHHHHHhc
Confidence 44555667777888889999999999998888888766666655 577899999 478899999874210 0000 000
Q ss_pred hhhhhcCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 008577 134 MRERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (561)
Q Consensus 134 ~~~~~~~~~~~~i~~~~~~p~l~~P~~~~~t~~~i~~l~~~f 175 (561)
....+.-|.++..--++=..-+ .+|.+|.+....|++.|
T Consensus 273 ~~~~~s~GR~DqyL~Pyyk~Dl---~~G~lt~eeA~Ell~~~ 311 (648)
T PF02901_consen 273 NGHSISLGRFDQYLYPYYKKDL---EAGRLTEEEAQELLECL 311 (648)
T ss_dssp -CSCEE-BSHHHHHHHHHHHHH---HTTSS-HHHHHHHHHHH
T ss_pred CCcccCCCchHHHHHHHHHhhH---hhhcCCHHHHHHHHHHH
Confidence 0011111211111111100011 46789999999999866
No 137
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=25.90 E-value=1.7e+02 Score=24.44 Aligned_cols=70 Identities=19% Similarity=0.103 Sum_probs=46.5
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHHHhcccCCCeEEEecccc
Q 008577 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (561)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~~Lk~~~P~~V~lLRGNH 291 (561)
.+.|+=|---|...+..+++..-...+..+.++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 4778888777888888888732222235567899999999898888766666655555566666655554
No 138
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=23.18 E-value=27 Score=23.87 Aligned_cols=16 Identities=25% Similarity=0.219 Sum_probs=13.6
Q ss_pred chhhhhccCcCCCCCc
Q 008577 538 SDEEQDMVSRDAVGKK 553 (561)
Q Consensus 538 ~~~~~~~~~~~~~g~~ 553 (561)
+...|+.+|+|++|.=
T Consensus 2 ~~~~F~~~D~d~dG~I 17 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKI 17 (29)
T ss_dssp HHHHHHHHSTTSSSEE
T ss_pred HHHHHHHHCCCCCCcC
Confidence 5678999999999964
No 139
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=22.99 E-value=1.7e+02 Score=33.63 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=37.1
Q ss_pred CCceEEEecCCC------------CHHHHHHHHHHhcCCCCCCceEEEecCccccCCChHHHHHHHH
Q 008577 220 DSEVIVVGDILG------------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLL 274 (561)
Q Consensus 220 ~~~i~VIGDIHG------------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvl~lL~ 274 (561)
..+|.|-.|+|= .|..|.+||. .+..... +.++.=||++.--.-|.+++...+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~-iA~e~~V-DmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILE-IAQENDV-DMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHH-HHHhcCC-cEEEecCcccccCCccHHHHHHHH
Confidence 357888999983 5677888888 5544433 447888999987777766655433
No 140
>PF03494 Beta-APP: Beta-amyloid peptide (beta-APP); InterPro: IPR013803 Amyloid-beta precursor protein (APP, or A4) is associated with Alzheimer's disease (AD), because one of its breakdown products, amyloid-beta (A-beta), aggregates to form amyloid or senile plaques [, ]. Mutations in APP or in proteins that process APP have been linked with early-onset, familial AD. Individuals with Down's syndrome carry an extra copy of chromosome 21, which contains the APP gene, and almost invariably develop amyloid plaques and Alzheimer's symptoms. APP is important for the neurogenesis and neuronal regeneration, either through the intact protein, or through its many breakdown products []. APP consists of a large N-terminal extracellular region containing heparin-binding and copper-binding sites, a short hydrophobic transmembrane domain, and a short C-terminal intracellular domain. The N-terminal region is similar in structure to cysteine-rich growth factors and appears to function as a cell surface receptor, contributing to neurite growth, neuronal adhesion, axonogenesis and cell mobility []. APP acts as a kinesin I membrane receptor to mediate the axonal transport of beta-secretase and presenilin 1. The N-terminal domain can regulate neurite outgrowth through its binding to heparin and collagen I and IV, which are components of the extracellular matrix. APP is also coupled to apoptosis-inducing pathways, and is involved in copper homeostasis/oxidative stress through copper ion reduction, where copper-metallated APP induces neuronal death []. The C-terminal intracellular domain appears to be involved in transcription regulation through protein-protein interactions. APP can promote transcription activation through binding to APBB1/Tip60, and may bind to the adaptor protein FE65 to transactivate a wide variety of different promoters. APP can be processed by different sets of enzymes: In the non-amyloidogenic (non-plaque-forming) pathway, APP is cleaved by alpha-secretase to yield a soluble N-terminal sAPP-alpha (neuroprotective) and a membrane-bound CTF-alpha. CTF-alpha is broken-down by presenilin-containing gamma-secretase to yield soluble p3 and membrane-bound AICD (nuclear signalling). In the amyloidogenic pathway (plaque-forming), APP is broken down by beta-secretase to yield soluble sAPP-beta and membrane-bound CTF-beta. CTF-beta is broken down by gamma-secretase to yield soluble amyloid-beta and membrane-bound AICD. Amyloid-beta is required for neuronal function, but can aggregate to form amyloid plaques that seem to disrupt brain cells by clogging points of cell-cell contact. This entry represents the amyloid-beta peptide (A-beta), which originates as a breakdown product from the cleavage of amyloid-beta precursor protein (APP, or A4), an integral, glycosylated membrane brain protein. More information about these protein can be found at Protein of the Month: Amyloid-beta Precursor Protein [].; GO: 0005488 binding, 0016021 integral to membrane; PDB: 2LMQ_F 3JTI_B 2LMO_B 3MOQ_D 2LNQ_E 2LMP_G 2BEG_B 1AMC_A 3OW9_B 3U0T_F ....
Probab=22.60 E-value=59 Score=23.82 Aligned_cols=28 Identities=39% Similarity=0.417 Sum_probs=19.3
Q ss_pred ccCceecccCCCCeEEEEeCCCCCCCCCCCCCceEEEEE
Q 008577 455 LNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVL 493 (561)
Q Consensus 455 ~~Gy~~~h~~~~gklITVFSApnY~~~~~~~N~gA~l~l 493 (561)
..||++.|. |+ +|-|- +..+|+||++=+
T Consensus 4 ~a~yeV~~~----kl--vf~aE-----DvgSNKGAIIGL 31 (39)
T PF03494_consen 4 NAGYEVYHK----KL--VFLAE-----DVGSNKGAIIGL 31 (39)
T ss_dssp CCCCCCCCC----CC--CCCCC-----CCSSSSSEEEEE
T ss_pred ccCcEEEee----EE--EEEhh-----HcCCCCceEEEE
Confidence 458998773 44 45553 357999999865
No 141
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=22.28 E-value=2.6e+02 Score=29.04 Aligned_cols=59 Identities=29% Similarity=0.377 Sum_probs=32.5
Q ss_pred CCeEEEecccccccccccccchhHHHH-HHhcccchhhHHHHHHHhhcCCCceEEee-ceEEEecCCcCcc
Q 008577 281 PHRVYLLRGNHETKNCTLAYGFWAELC-TKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (561)
Q Consensus 281 P~~V~lLRGNHE~~~~n~~yGF~~E~~-~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGIs~~ 349 (561)
..+|++|-||||.-. |..|. ..+. .|... ..- -.....||.+..-. .+++.-|-||-+.
T Consensus 127 nknvvvlagnhein~-ngny~--arlanhkls~---gDT----YnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYM--ARLANHKLSA---GDT----YNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchHH--HHHhhCCCCc---cch----hhccccccccccCcchhhhhcccCceec
Confidence 368999999999754 22221 1111 11111 112 23456677764432 4788889999654
Done!