BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008579
(561 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/583 (70%), Positives = 457/583 (78%), Gaps = 34/583 (5%)
Query: 1 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATS 60
MGTLQ+WRKAYGALKD+TKVGL VNS+YADLDVAIVKATNHVECPPK+RHLRKI ATS
Sbjct: 1 MGTLQSWRKAYGALKDSTKVGLVRVNSEYADLDVAIVKATNHVECPPKDRHLRKIFAATS 60
Query: 61 SIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRIL 120
R RADVAYCIHAL RRL KTRNWTVALKTLIVIHR LREGDPTFREELLNF RGRIL
Sbjct: 61 VTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRIL 120
Query: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRT 180
QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR+LKYD EAERLP+ G+DKGYSRT
Sbjct: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSRT 180
Query: 181 RDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGII 240
RDL+ EELLEQLPALQQLL+RL+GC+PEGAA HN+VIQYALALVLKESFK+YCAINDGII
Sbjct: 181 RDLDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKVYCAINDGII 240
Query: 241 NLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFL 300
NL+DKFFEM +HEAI +LEIYKRAGQQA SLSDFY+ CKGLELARNFQFPVLREPPQSFL
Sbjct: 241 NLIDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFL 300
Query: 301 TTMEEYIREAPRVVTVPSEPLLLTYRPEEG-PSEDANVPNDEPEA-PSSDIVPV--TNIE 356
TTMEEYI+EAPRVV VP+EPLLLTYRP++G +ED ++E E PS D+V V
Sbjct: 301 TTMEEYIKEAPRVVDVPAEPLLLTYRPDDGLTTEDTEPSHEEREMLPSDDVVVVSEETEP 360
Query: 357 DGPPTPPAPPQNNMDTGDLLGLSHAAPDASAIEESNALALAIVPSEPGATAPTFNSGAGL 416
PP P A QN +DT DL GL+ APD S IE+ NALALAIV ++ P F G
Sbjct: 361 SPPPPPSANAQNFIDTDDLWGLNTGAPDTSVIEDQNALALAIVSTDADPPTPHF----GQ 416
Query: 417 TKDFDPTGWELALVSTPSTNISSANERQLAGGLDSLTLNSLYDEAAYRA-QQPAYGAAAP 475
++DPTGWELALV+ PS++IS++ ER+LAGGLD+LTL+SLYD+ AY A Q+P YGA AP
Sbjct: 417 PNNYDPTGWELALVTAPSSDISASTERKLAGGLDTLTLSSLYDDGAYIASQRPVYGAPAP 476
Query: 476 NPFDVQDIFAMSNGVAPPPSVQMAAMAQQQTNPFGPFQPTYQQPPQ-----QQHLMMNPS 530
NPF D FA SNG APPP Q NPFG +Q TYQ PQ Q + N S
Sbjct: 477 NPFASHDPFASSNGTAPPPQQQAV------NNPFGAYQQTYQHQPQPTYQHQSNPPTNNS 530
Query: 531 NPFGDTGFGAFPVNPVTHP------------QANNPFGTPGLL 561
NPFGD FG FPVNPV+ Q NNPF + GL+
Sbjct: 531 NPFGD--FGEFPVNPVSQQPNTSGYGDFSVNQHNNPFRSTGLI 571
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/565 (69%), Positives = 459/565 (81%), Gaps = 24/565 (4%)
Query: 1 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATS 60
MGTLQ+WR+AYGALKDTTKVGL VNSDYA+LDVAIVKATNHVECPPK+RHLRKI +ATS
Sbjct: 1 MGTLQSWRRAYGALKDTTKVGLVRVNSDYAELDVAIVKATNHVECPPKDRHLRKIFLATS 60
Query: 61 SIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRIL 120
+IRPRADVAYCIHAL RRL KTRNWTVALK L+VIHR LR+GDPTFREELLNF +GRI+
Sbjct: 61 AIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKGRIM 120
Query: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRT 180
Q+SNFKDDSSP+AWDCS WVRTYALFLEERLECFR+LKYDIEAERLP+ G++KGYS+T
Sbjct: 121 QISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEAERLPKVSPGQEKGYSKT 180
Query: 181 RDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGII 240
RDL+ E+LLEQLPALQQLLHRL+GC+PEGAA HN++IQYAL+LVLKESFK+YCAIN+GII
Sbjct: 181 RDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGII 240
Query: 241 NLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFL 300
NLV+KFFEMPRHEAIKALEIYKRAG QAG+LS FY+VCKGLELARNFQFPVLREPPQSFL
Sbjct: 241 NLVEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFL 300
Query: 301 TTMEEYIREAPRVVTVPSEPLLLTYRPEEG-PSEDANVPNDEPEAPS---SDIVPVTNIE 356
TTMEEY+R+AP++V V S PLLLTY P++G SED ++E E S S +VP +
Sbjct: 301 TTMEEYMRDAPQMVDVTSGPLLLTYTPDDGLTSEDVGPSHEEHETSSPSDSAVVPSEETQ 360
Query: 357 DGPPTPPA--PPQNNMDTGDLLGLSHAAPDASAIEESNALALAIVPSEPGATAPTFNSGA 414
+PP+ PQN +DT DLLGL PD AI + NALALA+V ++ ++ +F
Sbjct: 361 LSSQSPPSVETPQNFIDTDDLLGLHDDTPDPLAILDQNALALALVSNDVDSSPFSF---- 416
Query: 415 GLTKDFDPTGWELALVSTPSTNISSANERQLAGGLDSLTLNSLYDEAAYR-AQQPAYGAA 473
G +D DP+GWELALV+TPS +IS+A ERQLAGGLD+LTLNSLYD+ A R AQQPAYG
Sbjct: 417 GQARDLDPSGWELALVTTPSNDISAATERQLAGGLDTLTLNSLYDDGALRAAQQPAYGVP 476
Query: 474 APNPFDVQDIFAMSNGVAPPPSVQMAAMAQQQTNPFGPFQPTYQQPPQQQHLMMNPS--N 531
A NPF+VQD+FA S+ V+PP +V NPFG ++PTY Q QQ L + PS N
Sbjct: 477 ASNPFEVQDLFAFSDSVSPPSAVN---------NPFGLYEPTYHQQEQQPQLQVAPSPAN 527
Query: 532 PFGDTGFGAFPVNPVTHPQANNPFG 556
PFGD FG FP+ PV+ PQ+ FG
Sbjct: 528 PFGD--FGEFPIVPVSEPQSTTSFG 550
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 332/601 (55%), Positives = 398/601 (66%), Gaps = 54/601 (8%)
Query: 1 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATS 60
M T ++RKA GA+KD+T V +A VNS++ DLDVAIVKATNHVE PKERH+R+I ATS
Sbjct: 1 MATFNSFRKAVGAIKDSTTVSIAKVNSEFKDLDVAIVKATNHVESAPKERHIRRIFSATS 60
Query: 61 SIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRIL 120
++PRADVAYCIHAL +RL+KTRNW VA+K LIVIHRTLREGDPTFREELLN+ RG IL
Sbjct: 61 VVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRGHIL 120
Query: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYS-- 178
++SNFKDD+SP+AWDCSAW+RTYALFLEERLEC+R+LKYDIEAERLP+ K
Sbjct: 121 RISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFN 180
Query: 179 -----RTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYC 233
RTR L EELLEQLPALQQLL+RL+GCQPEG+A NY+IQYALALVLKESFKIYC
Sbjct: 181 ASQTYRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYC 240
Query: 234 AINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLR 293
AINDGIINLVD FFEM RH+A+KAL IYKRAGQQA +L+DFY+ CKGLELARNFQFP LR
Sbjct: 241 AINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLR 300
Query: 294 EPPQSFLTTMEEYIREAPRVVTVPSE--------------PLLLTYRPEEGPSEDANVPN 339
+PP SFL TME+YI+EAP+ +V + + +PEE D N
Sbjct: 301 QPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADNQKEN 360
Query: 340 DEPEAPSSDIVPVTNIEDGPPTPPAPPQNNMDTGDLLGLSHAAPDASAIEESNALALAIV 399
E + P + + A P +DT DLLGL+ P A+ IE+ NALALAI
Sbjct: 361 SEGDQPLIEEEEEDQEKIE--EEDAKPSFLIDTDDLLGLNEINPKAAEIEDRNALALAIY 418
Query: 400 PSEPGATAPTFNSGAGLTKDFDPTGWELALVSTPSTNISSANER----QLAGGLDSLTLN 455
P PG AP ++ L + +GWELALV+ + N ++ +LAGG D+L L+
Sbjct: 419 P--PGHEAPGPSNILSLIET-GGSGWELALVTPQNNNNNNNPRPAPNTKLAGGFDNLLLD 475
Query: 456 SLYDEAAYRAQ----QPAYG-------AAAPNPFDV-QDIFAMSNGVAPPPSVQMAAMAQ 503
SLY++ + R Q YG AA PNPF + QD FAMSN +APP +VQMA Q
Sbjct: 476 SLYEDDSARRQIQLTNAGYGHGGIDTTAAPPNPFQMQQDPFAMSNNIAPPTNVQMAMQQQ 535
Query: 504 QQT----------NPFGPFQPTYQQPPQQQHLMMNPSNPFGDTGFGAFPVNPVTH-PQAN 552
QQ N P Q +PSNPFGD F A P P + PQ N
Sbjct: 536 QQQQMTMMHQSPYNYTHPHDYHQNHHHHQFSAGPSPSNPFGD-AFLALPPPPGSAGPQQN 594
Query: 553 N 553
N
Sbjct: 595 N 595
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/316 (77%), Positives = 277/316 (87%), Gaps = 1/316 (0%)
Query: 1 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATS 60
MGT ++RKAYGALKDTT VGLA VNS++ DLD+AIVKATNHVE PPKERH+RKI ATS
Sbjct: 1 MGTFTSFRKAYGALKDTTTVGLAKVNSEFKDLDIAIVKATNHVESPPKERHVRKIFSATS 60
Query: 61 SIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRIL 120
I+PRADVAYCIHAL +RL+KTRNW VA+K LIVIHRTLREGDPTFREELLN+ R IL
Sbjct: 61 VIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRRHIL 120
Query: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRT 180
++SNFKDD+SP+AWDCSAWVRTYALFLEERLEC+R+LKYDIEAERLP+ K + RT
Sbjct: 121 RISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTH-RT 179
Query: 181 RDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGII 240
R L E+LLEQLPALQQLL+RL+GCQPEGAA NY+IQYALALVLKESFKIYCAINDGII
Sbjct: 180 RMLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGII 239
Query: 241 NLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFL 300
NLVD FFEM RH+A+KAL IYKRAGQQA +L++FYD CKGLELARNFQFP LR+PP SFL
Sbjct: 240 NLVDMFFEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFL 299
Query: 301 TTMEEYIREAPRVVTV 316
TMEEYI+EAP+ +V
Sbjct: 300 ATMEEYIKEAPQSGSV 315
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/576 (48%), Positives = 356/576 (61%), Gaps = 75/576 (13%)
Query: 8 RKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATSSIRPRAD 67
R+ GA+KDTT V LA VNSDY +LD+AIVKATNHVE P KER++R I +A S+ RPRAD
Sbjct: 12 RRYLGAIKDTTTVSLAKVNSDYKELDIAIVKATNHVERPSKERYIRAIFMAISATRPRAD 71
Query: 68 VAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNF-QLRGRILQLSNFK 126
VAYCIHAL RRL++T NW VALKTLIVIHR LRE D TF EE++N+ + R +L +S+FK
Sbjct: 72 VAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSHFK 131
Query: 127 DDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESE 186
DDS P AW SAWVR YALFLEERLECFR+LKYD+E + RT+DL++
Sbjct: 132 DDSGPNAWAYSAWVRFYALFLEERLECFRVLKYDVEVDP------------PRTKDLDTP 179
Query: 187 ELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKF 246
+LLEQLPALQ+LL R++ CQPEGAAV N++IQ AL++V+ ES KIY A+ DGI NLVDKF
Sbjct: 180 DLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVDKF 239
Query: 247 FEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEY 306
F+M R++A+KAL++Y+RA +QAG LS+F++VCK + + R +F + +PP SFL MEEY
Sbjct: 240 FDMQRNDAVKALDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEEY 299
Query: 307 IREAPRVVTVPSEPLL--LTYRPEEGPSEDANVPNDEPEAPSSDIVPVTNIEDGPPTPPA 364
++EAP V E ++ LT P+E + + +P E + PV E P
Sbjct: 300 VKEAPLAAGVKKEQVVEKLT-APKEILAIEYEIPPKVVEEKPASPEPV-KAEAEKPVEKQ 357
Query: 365 PPQNNMDTGDLLGLSHAAPDASAIEESNALALAIVP---SEPGATAPTFNSGAGLTKDFD 421
P DLL + AP S +EE NALALAIVP +P +T F +G +
Sbjct: 358 P--------DLLSMDDPAPMVSELEEKNALALAIVPVSVEQPHSTT-DFTNG-------N 401
Query: 422 PTGWELALVSTPSTNISSANERQLAGGLDSLTLNSLYDEAAYRAQQP--AYGAAAPNPFD 479
TGWELALV+ PS+N +A + +LAGGLD LTL+SLY++A +QQ +Y NP
Sbjct: 402 STGWELALVTAPSSNEGAAADSKLAGGLDKLTLDSLYEDAIRVSQQQNRSYNPWEQNPVH 461
Query: 480 ----VQDIFAMSNGVAPPPSVQMAAMAQQQTNPFGPFQPTYQQPPQQQHLMMNP------ 529
+ F SNGVA P Q MA Q FG YQ Q +MM P
Sbjct: 462 NGHMMHQPFYASNGVAAPQPFQ---MANQNHQTFG-----YQH--QNAGMMMGPVQQPYQ 511
Query: 530 ----------SNPFGDTGFGAFPVNPVTHPQANNPF 555
NPF G NP PQ NP+
Sbjct: 512 QQQQNMNNPFGNPFVSNG------NP-QQPQGYNPY 540
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 277/538 (51%), Gaps = 57/538 (10%)
Query: 1 MGTLQTWRKAYGALKDTTKVGLAHVN---SDYADLDVAIVKATNHVECPPKERHLRKILI 57
MG+ +++A GA+KD T VGLA VN + ++LDVAIVKAT H E P +E+++R+IL
Sbjct: 1 MGS-SKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILS 59
Query: 58 ATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG 117
TS R+ + C+ L RRL KT+ WTVALKTLI+I R L EGD + +E+ RG
Sbjct: 60 LTSY--SRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRG 117
Query: 118 -RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKG 176
R+L +S+F+D S +WD SA+VRTYAL+L+ERL+ FR+ +R V GE
Sbjct: 118 TRLLNMSDFRDVSRSNSWDYSAFVRTYALYLDERLD-FRMQAR--HGKRGVYCVGGEADE 174
Query: 177 YSRTR-----------------DLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQY 219
+ + ++++E++ ++ LQQLL R + C+P G A +N V+
Sbjct: 175 EEQDQAAADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIV 234
Query: 220 ALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCK 279
AL ++KESF+IY + + + L+++F E+ ++IK +I+ R +Q L FY CK
Sbjct: 235 ALYPIVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCK 294
Query: 280 GLELARNFQFPVLREPPQSFLTTMEEYIREA--------PRVVTVPSEPLLLTYRPEE-- 329
+ +AR+ ++P + + Q L M+E+IR+ + V ++ R EE
Sbjct: 295 NMGIARSSEYPEIEKITQKKLDLMDEFIRDKSALEHTKQSKSVKSEADEDDDEARTEEVN 354
Query: 330 GPSEDANVPNDEPEAP---SSDIVPVTNIEDGPPTPPAPPQNNMDTGDLLGLSHAAPDAS 386
ED N PE P D+ P E+ + + GDLL L +
Sbjct: 355 EEQEDMNAIKALPEPPPKEEDDVKP----EEEAKEEVIIEKKQEEMGDLLDLGN-TNGGE 409
Query: 387 AIEESNALALAIVPSEPGATAPTFNSGAGLTKDFDPTGWELALVSTPSTNISSANERQLA 446
A + ++LALA+ + + + + D WE ALV T +TN+ S + +L
Sbjct: 410 AGQAGDSLALALFDGPYASGSGSESGPGWEAFKDDSADWETALVQT-ATNL-SGQKSELG 467
Query: 447 GGLDSLTLNSLYDEAAYRA---QQPAYGAAAPNPFDVQDIFAMSNGVAPPPSVQMAAM 501
GG D L LN +Y A A AYGA+ +M+ G A P+ M A+
Sbjct: 468 GGFDMLLLNGMYQHGAVNAAVKTSTAYGASGSAS-------SMAFGSAGRPAATMLAL 518
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 275/585 (47%), Gaps = 95/585 (16%)
Query: 6 TWRKAYGALKDTTKVGLAHVNSDYA-DLDVAIVKATNHVECPPKERHLRKILIATSSIRP 64
+ RKA G +KD T +G+A V S+ A DL+VAIVKAT+H + ++++R+IL TS
Sbjct: 4 SMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTS--LS 61
Query: 65 RADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG-RILQLS 123
R V C+ ++ RRL KTR+W VALK L+++HR L EGDP F+EE+L RG RIL +S
Sbjct: 62 RGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMS 121
Query: 124 NFKDDSSPIAWDCSAWVRTYALFLEERLEC------------------------------ 153
+F+D++ +WD SA+VRTYA +L++RLE
Sbjct: 122 DFRDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRD 181
Query: 154 -FRI---LKYDIEAER---LPRPVQG-----------EDKGYSRTRDLESEELLEQLPAL 195
FR YD E +P+ + E K + R++ E + ++ L
Sbjct: 182 DFRSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGHL 241
Query: 196 QQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAI 255
Q+LL R + C+P G A ++ +I A+ V+KESF++Y I + + L+DKFF+M + +
Sbjct: 242 QRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCV 301
Query: 256 KALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVT 315
KA + Y A +Q L FY CK +AR+ ++P ++ L T+EE++R+ +
Sbjct: 302 KAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRAK 361
Query: 316 VPSEPLLLTYRPEEGPSEDANVPNDEPEAPSSDIVPVTNIEDGPPTPPAPPQNNMDTGDL 375
P + P E+ N+ P + P PQ T DL
Sbjct: 362 SPERKEIEAPPAPAPPVEEPVDMNEIKALPPPENHTPPPPP----APEPKPQQPQVTDDL 417
Query: 376 LGLSHAAPDASAIEESNALALAIVPSEPGATAP--TFNSGAGLTK-------DFDPTGWE 426
+ L D S ++ N ALA+ P F+S +T + WE
Sbjct: 418 VNLRE--DDVSGDDQGNKFALALFAGPPANNGKWEAFSSDNNVTSAWQNPAAELGKADWE 475
Query: 427 LALVSTPSTNISSANERQLAGGLDSLTLNSLYDEAAYRAQ--------QPAYGAAAPNPF 478
LALV T S N+ + + GGLD L LN +YD+ A R + A P P
Sbjct: 476 LALVETAS-NLEH-QKAAMGGGLDPLLLNGMYDQGAVRQHVSTSELTGGSSSSVALPLPG 533
Query: 479 DV------------------QDIFAMSNGVAPPPSVQMAAMAQQQ 505
V QD FA S + PP VQMA M ++Q
Sbjct: 534 KVNSHILALPAPDGTVQKVNQDPFAASLTIPPPSYVQMAEMDKKQ 578
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 221 bits (564), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 278/578 (48%), Gaps = 101/578 (17%)
Query: 8 RKAYGALKDTTKVGLAHV---NSDYADLDVAIVKATNHVECPPKERHLRKILIATSSIRP 64
++A GA+KD T VGLA V +S +L++A+VKAT H + P +++++R+IL TS
Sbjct: 7 KRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCLTSY--S 64
Query: 65 RADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG-RILQLS 123
R V+ C+ L RRL KT+NW+VALKTLI+I R L +GD + +E+ RG R+L +S
Sbjct: 65 RNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTRLLNMS 124
Query: 124 NFKDDSSPIAWDCSAWVRTYALFLEERLE--------------------------CFRIL 157
+F+D S +WD SA+VRTYAL+L+ERL+ R
Sbjct: 125 DFRDASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKKKSGGGGGGDGDSGEEDDHRGT 184
Query: 158 KYDIEAERL---PRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHN 214
DI ++ + +PV ++++E++ ++ LQQLL R + C+P G A +N
Sbjct: 185 SNDIRSKAIVVKSKPVA----------EMKTEKIFNRVQHLQQLLDRFLACRPTGNAKNN 234
Query: 215 YVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDF 274
V+ A+ ++KESF++Y I + + L+++F E+ H++IK EI+ R +Q L F
Sbjct: 235 RVVIVAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPF 294
Query: 275 YDVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVTVPSEPLLLTYRPE------ 328
Y CK + +AR+ ++P L + Q L M+E+IR+ + ++
Sbjct: 295 YGWCKNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEEESK 354
Query: 329 ----EGPSEDANVPNDEPEAPSSDIVPVTNIEDGPPTPPAPPQNNMDT-GDLLGLS-HAA 382
+ ED N P AP + + D GDLL L+ A
Sbjct: 355 TEYIQENQEDLNSIKALP-APEQKEEEEEEEKMETKKDVEEVVSRQDQEGDLLDLTDEAG 413
Query: 383 PDASAIEESNALAL--AIVPSEPGATAPTFNSGAGLTKDFDPTGWELALVSTPSTNISSA 440
A + +S ALAL +V +E A+ P + + + D WE LV + + S
Sbjct: 414 VTAGTVGDSLALALFDGVVGTES-ASGPGWEAFNDNSAD-----WETDLVRSATR--LSG 465
Query: 441 NERQLAGGLDSLTLNSLYDEAAYRA--------------QQPAYGAA-----------AP 475
+ +L GG D+L L+ +Y A A A+G+A AP
Sbjct: 466 QKSELGGGFDTLLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSAGSPAASMLALPAP 525
Query: 476 NPFD--------VQDIFAMSNGVAPPPSVQMAAMAQQQ 505
P + D FA S VAPP VQM M ++Q
Sbjct: 526 PPTANGNRNSPVMVDPFAASLEVAPPAYVQMNDMEKKQ 563
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 185/326 (56%), Gaps = 27/326 (8%)
Query: 8 RKAYGALKDTTKVGLAHV------NSDYADLDVAIVKATNH-VECPPKERHLRKILIATS 60
+KA GA+KD T + LA V D L+VAI+KAT+H E P +R + +IL S
Sbjct: 6 KKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGIIS 65
Query: 61 SIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG-RI 119
S + A A C A+GRR+ +TRNW VALK+L+++ R ++GDP F E+L+ RG +I
Sbjct: 66 SKKSHA--ASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGAKI 123
Query: 120 LQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECF----------------RILKYDIEA 163
L LS+F+DDS+ WD +A+VRT+AL+L+ERL+CF RI
Sbjct: 124 LNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYTNREQTGRISTNSTTR 183
Query: 164 ERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALAL 223
R P G RD++ LL+++ Q+LL R + +P G A N +++ +L
Sbjct: 184 SRF-NPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMSLYA 242
Query: 224 VLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLEL 283
V++ESF +Y I+DG+ L+D FF + I A + RA +Q L+ FYD+ K + +
Sbjct: 243 VMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSIGI 302
Query: 284 ARNFQFPVLREPPQSFLTTMEEYIRE 309
R ++P +++ L T++E++++
Sbjct: 303 GRTSEYPSIQKISLELLETLQEFLKD 328
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 108/147 (73%), Gaps = 4/147 (2%)
Query: 8 RKAYGALKDTTKVGLAHVNSDYA-DLDVAIVKATNHVECPPKERHLRKILIATSSIRPRA 66
RKA GA+KD T +G+A V S+ A DL+VAIVKAT+H + P E+++R+IL TS R
Sbjct: 6 RKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTS--LSRG 63
Query: 67 DVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG-RILQLSNF 125
+ C+ ++ RRL+KTR+W VALK L+++HR L EGDP F+EE+L RG R+L +S+F
Sbjct: 64 YILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNMSDF 123
Query: 126 KDDSSPIAWDCSAWVRTYALFLEERLE 152
+D++ +WD SA+VRTYA +L++RLE
Sbjct: 124 RDEAHSSSWDHSAFVRTYAGYLDQRLE 150
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 162/370 (43%), Gaps = 48/370 (12%)
Query: 173 EDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIY 232
E K + R++ E + ++ LQ+LL R + +P G A ++ +I AL V++ESFK+Y
Sbjct: 239 EKKVVTPLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLY 298
Query: 233 CAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVL 292
I + + L+DKFF+M + +KA + Y A +Q L FY+ CK +AR+ ++P +
Sbjct: 299 ADICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEV 358
Query: 293 REPPQSFLTTMEEYIREAPRVVTVPSEPLLLTYRPEEGPSEDANVPNDEPEAPSSDIVPV 352
+ L T+EE++R+ + P + P E N E +A
Sbjct: 359 QRITSKLLETLEEFVRDRAKRGKSPERKEIEAPPPVVEEEEPEPDMN-EIKALPPPENYT 417
Query: 353 TNIEDGPPTPPAPPQNNMDTGDLLGLSHAAPDASAIEESNALALAIVPSEPGATAP--TF 410
P P PQ T DL+ L + +A ++ N ALA+ PG F
Sbjct: 418 PPPPPEPEPQPEKPQF---TEDLVNLRE--DEVTADDQGNKFALALFAGPPGNNGKWEAF 472
Query: 411 NSGAGLTKDFDPTG------WELALVSTPSTNISSANERQ---LAGGLDSLTLNSLYDEA 461
+S + +P WELALV T S N+ E+Q L GG D+L LN +YD+
Sbjct: 473 SSNGVTSAWQNPAAEPGKADWELALVETTS-NL----EKQTAALGGGFDNLLLNGMYDQG 527
Query: 462 AYRAQ--------QPAYGAAAPNPFDV------------------QDIFAMSNGVAPPPS 495
R A A P P QD FA S + PP
Sbjct: 528 MVRQHVSTSQLTGGSASSVALPLPGKTNNQVLALPAPDGTVEKVNQDPFAASLTIPPPSY 587
Query: 496 VQMAAMAQQQ 505
VQMA M ++Q
Sbjct: 588 VQMAEMEKKQ 597
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 15/292 (5%)
Query: 17 TTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALG 76
T ++ A + + + A+ KAT H PK++HL ++ AT+ ++ L
Sbjct: 7 TDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLF 64
Query: 77 RRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDC 136
R A +W V K L+ H + G+ F + L + R + LSNF D S +D
Sbjct: 65 ER-ATNSSWVVVFKALVTTHHLMVHGNERFIQYLAS---RNTLFNLSNFLDKSGSHGYDM 120
Query: 137 SAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQ 196
S ++R Y+ +L E+ +R + +D R +G D G RT + E+LL+ +P LQ
Sbjct: 121 STFIRRYSRYLNEKAFSYRQMAFDFA-----RVKKGAD-GVMRT--MAPEKLLKSMPILQ 172
Query: 197 QLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIK 256
+ L+ + N VI A L+ K+ K++ NDG+INL++KFFEM + +
Sbjct: 173 GQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKD 232
Query: 257 ALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIR 308
ALEIYKR + +S+F V + + + + P L + P S + T+E+++
Sbjct: 233 ALEIYKRFLTRMTRVSEFLKVAEQVGIDKG-DIPDLTQAPSSLMETLEQHLN 283
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 15/292 (5%)
Query: 17 TTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALG 76
T ++ A + + + A+ KAT H PK++HL ++ AT+ ++ L
Sbjct: 7 TDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLF 64
Query: 77 RRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDC 136
R A +W V K L+ H + G+ F + L + R + LSNF D S +D
Sbjct: 65 ER-ATNSSWVVVFKALVTTHHLMVHGNERFIQYLAS---RNTLFNLSNFLDKSGSHGYDM 120
Query: 137 SAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQ 196
S ++R Y+ +L E+ +R + +D R +G D G RT + E+LL+ +P LQ
Sbjct: 121 STFIRRYSRYLNEKAFSYRQMAFDFA-----RVKKGAD-GVMRT--MVPEKLLKSMPILQ 172
Query: 197 QLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIK 256
+ L+ + N VI A L+ K+ K++ NDG+INL++KFFEM + +
Sbjct: 173 GQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKD 232
Query: 257 ALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIR 308
ALEIYKR + +S+F V + + + P L + P S + T+E+++
Sbjct: 233 ALEIYKRFLTRMTRVSEFLKVADEVGIDKG-DIPDLTQAPSSLMETLEQHLN 283
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVI 95
+ KAT H PK++HL ++ T+ + ++ +L R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + LSNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYLAS---RNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNY 215
+ +D + +G D G RT + +E+LL+ +P +Q + L+ + N
Sbjct: 140 QVAFDFTKVK-----RGAD-GVMRT--MNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 VIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFY 275
VI A L+ K++ +++ A N+GIINL++K+F+M +++ + L+IYK+ + +S+F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 DVCKGLELARNFQFPVLREPPQSFLTTMEEYI 307
V + + + R P L + P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVI 95
+ KAT H PK++HL ++ T+ + ++ +L R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + LSNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYLAS---RNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNY 215
+ +D + +G D G RT + +E+LL+ +P +Q + L+ + N
Sbjct: 140 QVAFDFTKVK-----RGAD-GVMRT--MNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 VIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFY 275
VI A L+ K++ +++ A N+GIINL++K+F+M +++ + L+IYK+ + +S+F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 DVCKGLELARNFQFPVLREPPQSFLTTMEEYI 307
V + + + R P L + P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVI 95
+ KAT H PK++HL ++ T+ + ++ +L R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + LSNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYLAS---RNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNY 215
+ +D + +G D G RT + +E+LL+ +P +Q + L+ + N
Sbjct: 140 QVAFDFTKVK-----RGAD-GVMRT--MNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 VIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFY 275
VI A L+ K++ +++ A N+GIINL++K+F+M +++ + L+IYK+ + +S+F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 DVCKGLELARNFQFPVLREPPQSFLTTMEEYI 307
V + + + R P L + P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 149/306 (48%), Gaps = 20/306 (6%)
Query: 7 WRKAYGALKDTTKVGLAHVNS----DYADLDVAIVKATNHVECPPKERHLRKILIATSSI 62
+R+ G KD +G A V + + D++VA+V+AT+H +CP ++ + +IL S+
Sbjct: 9 FRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFLVSN- 67
Query: 63 RPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRI-LQ 121
+ + + RRLAKTR+ VA KTL++ HR LR + ++L G + +
Sbjct: 68 -TPGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSIEQQLHIAHTSGHLQIG 126
Query: 122 LSNFKDDSSPIAWDCSAWV--RTYALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSR 179
S F ++ D ++V + Y +L+ER+ + I PV +SR
Sbjct: 127 CSWFM-----MSLDSRSFVFLQNYVAYLQERV------GWIINQAGKLEPVMSGGTKFSR 175
Query: 180 TRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGI 239
++ + + LP Q+ + +++ C P A + ++Q A +LKESF++Y +DG+
Sbjct: 176 YKEKSMDLVFHILPKCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTYSDGM 235
Query: 240 INLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSF 299
LV F++ R A + ++A QQ L YD C+G ++ +P ++
Sbjct: 236 TALVSMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGFAGMKSLDYPSVQAISMDH 295
Query: 300 LTTMEE 305
+ +EE
Sbjct: 296 IVALEE 301
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 35 AIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIV 94
A+ KAT PK +H+ IL AT+ P + I AL RL K ++WT+ KTLIV
Sbjct: 13 AVKKATKVKLAAPKYKHVEIILEATTE-DPET-LENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 95 IHRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECF 154
H L+EG P ++ R RIL++ SS +A + + Y+ FL ER + +
Sbjct: 70 FHVMLKEGAPN--TTIVALSQRPRILEV---LKASSLLAQGKNIY--NYSRFLSERAKQY 122
Query: 155 RILKYDIEAERLPRPVQGEDKGYSRTRDLESEE-LLEQLPALQQLLHRLVGCQPEGAAVH 213
L D Q D + R+++ E LL + +Q L RL+ CQ +
Sbjct: 123 GRLGVDY--------AQVGDAPKKKIREMKLENGLLRNVEGIQAQLRRLIKCQFVAEEID 174
Query: 214 NYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSD 273
N + A L++ + ++ A+N G+IN+++ +FEM H+A ++L IYK Q + +
Sbjct: 175 NDIAITAFRLLVGDLLVLFKAVNIGVINVLEHYFEMGHHDAAQSLRIYKTFVNQTEDIIN 234
Query: 274 FYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIRE 309
+ + LE F P ++ P S ++EEY+ +
Sbjct: 235 YLSTARSLEFVTKFPVPNIKHAPISLTASLEEYLND 270
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 140/284 (49%), Gaps = 25/284 (8%)
Query: 35 AIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIV 94
++ KAT PK++HL ++ T+ P + + + L R ++ NW V K+LI
Sbjct: 27 SVCKATTEECIGPKKKHLDYLVHCTN--EPNVSIPHLANLLIER-SQNANWVVVYKSLIT 83
Query: 95 IHRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSP-----------IAWDCSAWVRTY 143
H + G+ F + L + LS+F D + + +D S ++R Y
Sbjct: 84 THHLMAYGNERFMQYLAS---SNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRY 140
Query: 144 ALFLEERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLV 203
A +L E+ +R + +D + +G+++G R + +E+LL+ LP LQ L L+
Sbjct: 141 AKYLNEKSLSYRAMAFD-----FCKVKRGKEEG--SLRSMNAEKLLKTLPVLQAQLDALL 193
Query: 204 GCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKR 263
+ + N VI + L+ ++ +++ NDGIINL++K+F+M + A AL++YK+
Sbjct: 194 EFDCQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKK 253
Query: 264 AGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYI 307
+ + +F V + + + + P L + P S L +E+++
Sbjct: 254 FLVRMDRVGEFLKVAENVGIDKG-DIPDLTKAPSSLLDALEQHL 296
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 15/279 (5%)
Query: 30 ADLDVAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVAL 89
+ L I KAT PK++HL +L T+ P + + L R + NWTV
Sbjct: 35 SQLGKTICKATTEEVMAPKKKHLDYLLHCTN--EPNVSIPSMANLLIER-TQNPNWTVVY 91
Query: 90 KTLIVIHRTLREGDPTFREELLNFQLRGRILQLSNFKDD-SSPIAWDCSAWVRTYALFLE 148
K LI IH + G+ F + L + L+ F D +D S VR YA ++
Sbjct: 92 KALITIHNIMCYGNERFSQYLASC---NTTFNLTAFVDKVGGAGGYDMSTHVRRYAKYIG 148
Query: 149 ERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPE 208
E++ +R+ +D + +G + G RT + +++LL+ +P LQ + L+
Sbjct: 149 EKINTYRMCAFDFCKVK-----RGREDGLLRT--MHTDKLLKTIPILQNQIDALLEFSVT 201
Query: 209 GAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQA 268
+ ++N VI + L+ ++ +++ NDGIIN+++K+F+M + + AL+ YK +
Sbjct: 202 TSELNNGVINCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRL 261
Query: 269 GSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYI 307
+++F V + + + R + P L P S L +E ++
Sbjct: 262 DKVAEFLRVAESVGIDRG-EIPDLTRAPASLLEALEAHL 299
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 35/301 (11%)
Query: 30 ADLDVAIVKATNHVE-CPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVA 88
+ L +VK ++ PPK++++ IL TSS R ++ HAL RL+ T WT+
Sbjct: 2 SSLYTKLVKGATKIKMAPPKQKYVDPILSGTSSARGLQEIT---HALDIRLSDTA-WTIV 57
Query: 89 LKTLIVIHRTLREG--DPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALF 146
K LIV+H +++G D T R N + QL + + D A R Y +
Sbjct: 58 YKALIVLHLMIQQGEKDVTLRHYSHNLD----VFQLRKISHTTKWSSNDMRALQR-YDEY 112
Query: 147 LEERLECFRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQ 206
L+ R E + L D + G L +E L+ + +L+ ++ L+ +
Sbjct: 113 LKTRCEEYGRLGMDHLRDNYSSLKLGSKN------QLSMDEELDHVESLEIQINALIRNK 166
Query: 207 PEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQ 266
+ + N+++ YA L++++ +Y A+N+G+I L++ FFE+ A + L++YK
Sbjct: 167 YSVSDLENHLLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLDLYK---- 222
Query: 267 QAGSLSDFYD----VCKGLELAR--NFQFPVLREPPQSFLTTMEEYIR-EAPRVVTVPSE 319
DF D V + L++ + + PV++ + ++EE++R E R PSE
Sbjct: 223 ------DFVDMTEYVVRYLKIGKAVGLKIPVIKHITTKLINSLEEHLREETKRQRGEPSE 276
Query: 320 P 320
P
Sbjct: 277 P 277
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 45/322 (13%)
Query: 4 LQTWRKAYGALKDTTK---VGLAHVNSDYA-DLDVAIVKATNH----VECPPKERHLRKI 55
++ W++A GALKD +G + S DLD AI+ AT+H V+ R + I
Sbjct: 1 MKLWKRASGALKDRKTLFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWI 60
Query: 56 LIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQL 115
+ ++++P +HAL R+ +TR+W VALK L+++H L + +E +
Sbjct: 61 RSSPANLKP------LVHALSSRVNRTRSWIVALKALMLVHGVLCCKVTSLQE------I 108
Query: 116 RGRILQLSNFKDDSS--PIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGE 173
R LS+F D S W +A++R Y FL++ + D R +P
Sbjct: 109 RRLPFDLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQ----YSFFLSDQIRRRHKKP---- 160
Query: 174 DKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYC 233
D ++E LE++ LQ LLH L+ +P + +I A+ V+ E F IY
Sbjct: 161 ------QLDSVNQE-LERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYG 213
Query: 234 AINDGIINLVDKFF-EMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVL 292
I I L+ K + EA+ AL+I K+A Q L+ +++ CK ++ P
Sbjct: 214 RICSAIAKLLIKIHPAAGKAEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIP-- 271
Query: 293 REPPQSFLTTMEEYIREAPRVV 314
F+T EE I+ +V+
Sbjct: 272 -----KFVTIPEEDIKAIEKVI 288
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 1 MGTLQTWRKAYGALKDT---TKVGLAHVNSDYADLD--VAIVKATNHV-ECPPKERHLRK 54
MG + ++ G +KD +K L N+ L +++++AT H PP RHL
Sbjct: 1 MGRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAV 60
Query: 55 ILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQ 114
IL A + R A A + ++ RL T + VALK+LI+IH ++ G +++L F
Sbjct: 61 ILSAGTGSRATASSA--VESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFP 118
Query: 115 LRG--RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQG 172
G L+LS F+D+ SP+ W+ S+WVR YAL+LE L RI+ + I + +
Sbjct: 119 ASGGRNYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISST--SSTIHK 176
Query: 173 EDKGYSRTRDLESEELLEQLPALQQLL 199
E+ L + +LL ++ AL LL
Sbjct: 177 EEY-EEMVSSLTNSDLLREIDALVGLL 202
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 22/277 (7%)
Query: 39 ATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRT 98
AT PPK+++L IL+ TS+ D + L R+ T WT+ K+L+V+H
Sbjct: 11 ATKIKSAPPKQKYLDPILLGTSN---EEDFYEIVKGLDSRINDTA-WTIVYKSLLVVHLM 66
Query: 99 LREGDPTFREELLNFQLRG-RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRIL 157
+REG ++ L + R + N + + + D A R Y +L+ R F +
Sbjct: 67 IREGS---KDVALRYYSRNLEFFDIENIRGSNGSASGDMRALDR-YDNYLKVRCREFGKI 122
Query: 158 KYDI--EAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNY 215
K D + R + G + G SR + L+ + +L+ + L+ + + N
Sbjct: 123 KKDYVRDGYRTLKLNSG-NYGSSRNKQHSINIALDHVESLEVQIQALIKNKYTQYDLSNE 181
Query: 216 VIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAGSLSDFY 275
+I + L++++ +Y A+N+GII L++ FFE+ H A + L++YK + D
Sbjct: 182 LIIFGFKLLIQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYK-------TFVDLT 234
Query: 276 D-VCKGLELARN--FQFPVLREPPQSFLTTMEEYIRE 309
+ V + L+ + + PV++ + ++EE++ E
Sbjct: 235 EHVVRYLKSGKTAGLKIPVIKHITTKLVRSLEEHLIE 271
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 4 LQTWRKAYGALKDTTK---VGLAHVNSDY--ADLDVAIVKATNHVECPPKERHLRKILIA 58
++ W++A A+KD VG + NS Y ADL+ AI+KAT+H + + ++
Sbjct: 1 MKLWKRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVY-- 58
Query: 59 TSSIRPR-ADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRG 117
IR ++ ++A+ R+ TR+W VALK+L+++H L P+ E R
Sbjct: 59 -KWIRSSPLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCKVPSVVGE-----FRR 112
Query: 118 RILQLSNFKDDSSPIA--WDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDK 175
LS+F D S ++ W + +VRTY FL ++++ R +
Sbjct: 113 LPFDLSDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFL--------SDQIHRLRGNNRR 164
Query: 176 GYSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAI 235
+T D +E LE++ LQ LL ++ +P + +I A+ ++ ES IY I
Sbjct: 165 SLEKTSDSVIQE-LERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESINIYGRI 223
Query: 236 NDGIINLVDKFFEMP---RHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVL 292
++ + +P + EA L+I + Q L +++ CKG ++ + P
Sbjct: 224 CGAVMKV------LPLAGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNAREIPQF 277
Query: 293 REPPQSFLTTMEEYI 307
P+ + +E+ I
Sbjct: 278 VRIPEEEVEAIEKMI 292
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 48/318 (15%)
Query: 4 LQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNH----VECPPKERHLRKILIAT 59
++ W++A LKD G + + +D L A+VKAT+H ++ + R +L +
Sbjct: 1 MKLWKRAAVVLKD----GPSLIAADDI-LTAAVVKATSHDELSIDTESAQFIYRHVLSSP 55
Query: 60 SSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRI 119
SS++P + + R+ +TR+W VALK L+++H T E + GR+
Sbjct: 56 SSLKP------LVSLISSRVKRTRSWAVALKGLMLMHGFFL-CKSTVAESI------GRL 102
Query: 120 -LQLSNFKDDSSPIAWDCSAW---VRTYALFLEERLECFRILKYDIEAERLPRPVQGEDK 175
LS+F + +S I + VR Y FL+ R IL +D G
Sbjct: 103 PFDLSSFGEGNSRIMSKSGGFNLFVRAYFAFLDRR----SILFHD-----------GNRH 147
Query: 176 GYSRTRDLESEELLEQ--LPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYC 233
Y+ ES L+ + +Q ++ L+ +P G + VI A+ V+ E +IY
Sbjct: 148 RYNE----ESSVLIRLVIIRKMQIIVDSLIRIKPIGENMMIPVINEAMENVVSEIMEIYG 203
Query: 234 AINDGIINLV-DKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFPVL 292
I I ++ + ++ + EA AL+I ++ +Q G L +++ CK L ++ + P
Sbjct: 204 WICRRIAEVLPNVHSKIGKTEADLALKIVAKSMKQGGELKKYFEFCKDLGVSNAQEIPNF 263
Query: 293 REPPQSFLTTMEEYIREA 310
P++ + ++E +R A
Sbjct: 264 VRIPEADVIHLDELVRTA 281
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 58/289 (20%)
Query: 4 LQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHL----RKILIAT 59
++ WR+ GA+KD L+ + + A++KAT+H + ++ R I
Sbjct: 5 MKLWRRVSGAIKDK----LSLITATDEKFTAAVIKATSHNDVSMDIENVQFIYRYIQSNP 60
Query: 60 SSIRPRADVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRI 119
SS +P I A+ R+ TRNWTVALK L+++H G ++ GR+
Sbjct: 61 SSFKP------IIRAVSLRVEHTRNWTVALKCLMLLHGLFFSG-------IMTVDSIGRL 107
Query: 120 -LQLSNFKDDSSPIAWD--CSAWVRTYALFLEERLECFRILKYDIEAERLPRPVQGEDKG 176
LS F S + + +VR Y +FL+ER IL Y+ R
Sbjct: 108 PFDLSGFGRRKSRFSRTGRFNIFVRAYFMFLDER----SILYYNKNMIR----------- 152
Query: 177 YSRTRDLESEELLEQLPALQQLLHRLVGCQPEGAAVHNYVIQYALALVLKESFKIYCAIN 236
LE + +Q+++ L+ +P G VI+ A+ V+ E I I
Sbjct: 153 ------------LEIIVKMQRIVDSLMRIKPIGET--PLVIE-AMEYVISEVVLINGHIC 197
Query: 237 DGIINLV----DKFFEMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGL 281
G + E+ EA A+ I ++ Q L +++ C+G
Sbjct: 198 RGFAGFLSDVQSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRGF 246
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 12 GALKDTTKVGLAHVNSDYAD-----LDVAIVKATNHVECPPKERHLRKILIATSSIRPRA 66
G KD +G A + + + +A++K+T P +I+ S+ R A
Sbjct: 10 GKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVISYSNSR-YA 68
Query: 67 DVAYCIHALGRRLAKTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRI-LQLSNF 125
A+ A RL T+N VA K+LIVIH+ ++ F E L GR L+L+ F
Sbjct: 69 PAAFS--AALWRLRVTKNAIVATKSLIVIHKLIKSSRDKF--EGLG---HGRNNLKLNEF 121
Query: 126 KDDSSPIAWDCSAWVRTYALFLE 148
D SS + + S W+R Y +L+
Sbjct: 122 SDKSSNLTLELSQWIRWYGQYLD 144
>sp|Q9FKQ2|CAP18_ARATH Putative clathrin assembly protein At5g65370 OS=Arabidopsis
thaliana GN=At5g65370 PE=3 SV=1
Length = 295
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 1 MGTLQTWRKAYGALKD---TTKVGLAHVNS--DYADLDVAIVKATNHV-ECPPKERHLRK 54
MG L T G LKD K+ + H+ S + +D+A++KAT+H PP ++++
Sbjct: 1 MGKLATLN---GILKDEASQMKLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYV-- 55
Query: 55 ILIATSSIRPRADVAY---CIHALGRRLAKTRNWTVALKTLIVIHRTLR-----EGDPTF 106
+ ++ D Y + A+ RL T + VA K LI++H+ ++ G+ +
Sbjct: 56 -----TFLQSTIDTCYGPDTVDAILHRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSL 110
Query: 107 REEL----LNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRIL 157
R + L + G L+L++ +SS + + WV+ Y +L+ L +L
Sbjct: 111 RNNINHRTLIYTQGGSNLKLNDLNVNSSRFTRELTPWVQWYKQYLDCYLSIAEVL 165
>sp|Q9P6L5|SLA2_SCHPO Endocytosis protein end4 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=end4 PE=1 SV=2
Length = 1102
Score = 36.2 bits (82), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 24 HVNSDYADLDVAIVKATNHVECPPKERHLRKILIAT---SSIRPRADVAYCIHALGRRLA 80
H+ SD A L ++ KAT+ E PK +H+R +I T + RP A + L LA
Sbjct: 10 HMQSD-ASLMTSVRKATSIDETAPKRKHVRSCIIFTWDHHTARPFW-TAIKVQPL---LA 64
Query: 81 KTRNWTVALKTLIVIHRTLREGDPTFREELLNFQLRGRILQL--SNFKDDSSPIAWDCSA 138
N K LI IHR L+EG + L++ Q L+ + +SSP + S
Sbjct: 65 ---NEVQTFKALITIHRVLQEG---HKSALVDSQSEKGWLKTCERQYDGESSPKGY--SD 116
Query: 139 WVRTYALFLEERL 151
+R Y +L ++L
Sbjct: 117 LIRDYVDYLLDKL 129
>sp|O75146|HIP1R_HUMAN Huntingtin-interacting protein 1-related protein OS=Homo sapiens
GN=HIP1R PE=1 SV=2
Length = 1068
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 34 VAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRL--AKTRNWTVALKT 91
++I KA N E P KE+H R+I++ T + + +A+G L + +W K
Sbjct: 33 ISISKAINTQEAPVKEKHARRIILGTH--HEKGAFTFWSYAIGLPLPSSSILSW----KF 86
Query: 92 LIVIHRTLREGDP 104
V+H+ LR+G P
Sbjct: 87 CHVLHKVLRDGHP 99
>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus
GN=Hip1r PE=1 SV=2
Length = 1068
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 34 VAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALG--RRLAKTRNWTVALKT 91
++I KA N E P KE+H R+I++ T + + +A+G + +W K
Sbjct: 33 ISISKAINSQEAPVKEKHARRIILGTH--HEKGAFTFWSYAIGLPLSSSSILSW----KF 86
Query: 92 LIVIHRTLREGDP 104
V+H+ LR+G P
Sbjct: 87 CHVLHKVLRDGHP 99
>sp|P33338|SLA2_YEAST Protein SLA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SLA2 PE=1 SV=5
Length = 968
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 24/259 (9%)
Query: 30 ADLDVAIVKATNHVECPPKERHLRKILIATSSIRPRADVAYCIHALGRRLAKTRNWTVAL 89
+DL A+ KA + E PK +H+R ++ T + V + + L +
Sbjct: 6 SDLQKALKKACSVEETAPKRKHVRACIVYTWDHQSSKAVFTTL----KTLPLANDEVQLF 61
Query: 90 KTLIVIHRTLREGDPTFREELLNFQLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEE 149
K LIV+H+ ++EG P+ E + + R I L S S +R Y +L
Sbjct: 62 KMLIVLHKIIQEGHPSALAEAI--RDRDWIRSLGRVHSGGSSY----SKLIREYVRYLVL 115
Query: 150 RLEC------FRILKYDIEAERLPRPVQGEDKGYSRTRDLESEELLEQLPALQQLLHRLV 203
+L+ F ++ E V D+GY DL S L + L Q++
Sbjct: 116 KLDFHAHHRGFNNGTFEYEEYVSLVSVSDPDEGYETILDLMS--LQDSLDEFSQII--FA 171
Query: 204 GCQPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKR 263
Q E + AL ++ ES+ IY I + + + + A++ L+ +R
Sbjct: 172 SIQSERRNTECKI--SALIPLIAESYGIYKFITSMLRAMHRQLNDAEGDAALQPLK--ER 227
Query: 264 AGQQAGSLSDFYDVCKGLE 282
Q L +FY C ++
Sbjct: 228 YELQHARLFEFYADCSSVK 246
>sp|P04076|ARLY_YEAST Argininosuccinate lyase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARG4 PE=1 SV=2
Length = 463
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 209 GAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFE----MPRHEAIKALEIYK-R 263
G N++ ++A E IYC G I L D + MP+ + +LE+ + +
Sbjct: 248 GTLFMNHISRFA------EDLIIYCTAEFGFIQLSDAYSTGSSLMPQKKNADSLELLRGK 301
Query: 264 AGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVV---TVPSEP 320
+G+ G L+ F KG+ + +EP LTT+E + A V+ TV E
Sbjct: 302 SGRVFGDLTGFLMSLKGIPSTYDKDMQEDKEPLFDCLTTVEHSMLIATGVISTLTVNKEK 361
Query: 321 L 321
+
Sbjct: 362 M 362
>sp|P41906|ARLY_SACDO Argininosuccinate lyase OS=Saccharomyces douglasii GN=ARG4 PE=3
SV=1
Length = 463
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 209 GAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFE----MPRHEAIKALEIYK-R 263
G N++ ++A E IYC G I L D + MP+ + +LE+ + +
Sbjct: 248 GTLFMNHISRFA------EDLIIYCTAEFGFIQLSDAYSTGSSLMPQKKNADSLELLRGK 301
Query: 264 AGQQAGSLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVT 315
+G+ G L+ F KG+ + +EP LTT+E + A V++
Sbjct: 302 SGRVFGDLTGFLMSLKGIPSTYDKDMQEDKEPLFDCLTTVEHSMLIATGVIS 353
>sp|A4GSN8|NUA_ARATH Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=1
Length = 2093
Score = 34.3 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 248 EMPRHEAIKALEIYKRAGQQAGSLSDFYDVCKGLELARNFQFP--------VLREPPQSF 299
E E + +E K G+ L D+ +G ++A + P L P QS
Sbjct: 1872 EEENQEPLTDMESDKEEGEL--DLDTLEDLEEGTDVASMMRSPEKEEVQPETLATPTQS- 1928
Query: 300 LTTMEEYIREAPRVVTVPSEPLLLTYRPEEG---PSEDANVPN---DEPEAPSSDIVPVT 353
+ ME + EA + P E + +EG E A++PN D+ EAP +DI P T
Sbjct: 1929 PSRMETAMEEAETTIETPVE----DDKTDEGGDAAEEAADIPNNANDQQEAPETDIKPET 1984
Query: 354 NIEDGPPTPPAP 365
+ P AP
Sbjct: 1985 SAATTSPVSTAP 1996
>sp|P23677|IP3KA_HUMAN Inositol-trisphosphate 3-kinase A OS=Homo sapiens GN=ITPKA PE=1
SV=1
Length = 461
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 335 ANVPNDEPEAPSSDIVPVTNIE----DGPPTPPAPPQNNMDTGDLLGLSH 380
VPN P AP + ++P + D PPT P PP+ D G SH
Sbjct: 64 GQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSH 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,073,846
Number of Sequences: 539616
Number of extensions: 10849235
Number of successful extensions: 35538
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 34732
Number of HSP's gapped (non-prelim): 776
length of query: 561
length of database: 191,569,459
effective HSP length: 123
effective length of query: 438
effective length of database: 125,196,691
effective search space: 54836150658
effective search space used: 54836150658
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)